Lsi04G016530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G016530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein LIKE COV 1-like isoform X1
Location	chr04: 24004080 .. 24006741 (-)
RNA-Seq Expression	Lsi04G016530
Synteny	Lsi04G016530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGACTCAAAATGTGATTCTAAAATCAAAGTGGAGAGAGGAAAAAAAAAACCAAAACGGAAATGAGTACAAGAGAGAGGGAACGAGATCTAGAGCTTTTGATCCCAGTCGCTACAGTTTCTGAAAATGGAGCCTCCAAATCTTCCTCCGTCCCCGCTGCCGCTTTATCCAATCATCATTCCGGCCGAGAGGTCCGTTTTCGCTTCTCATTCTTGATTCTCTCTTTTCCCCTTTGTAATTCTGTCCGACATTGTTCTTTCCGTTTTCTGCCGCGATTTCTCACTCTGTAATTCTTCAATTCGAGTTAAGTATGTATGAAGAGTGTTAGATTATCAACCAACATTACACTAAACCTTCGCTTCATCGATATATTTTAGGCATTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGGTAATTCTTCTGCTGTTCTTCCAAGATATTCAGTTCGTTAAGATTTGTTGTTAAATTTCTGGAATAAATGCATCTTTTCTTACGGTTTTTTTCCCAAGCGTTTCTGCTGAAGATATGGATTTATGTCATGAATGTGAGATCATATTGTATTTGATTGTGTGATTATGAGTGAAGGCAAGACTTCCAAACATCGGAGTTTGTTTAGTGACTGTTTTCTCTAGTATAGTATACTTCAGGATCAAGAGCTAACTATGCTTAAAATGTGCACTGTTGATTCTTAGCTTATGGGGATTTGTTTGCAGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACATGGGGCTTCATTCGTTTTGTTGATGGTTTCTTCTCACCAATATATAATCACTTAGGGATTAATATTTTTGGTAAGTTAAAGAGTTATATTTTGTCACTAAAAAACCAGAAGAACAATTTTTAAGAGATTTTCGGCAGTTGATTTTCAGTAGAAATTTCTGCAGGGCTTGGGTTTATTACCTCCATCACATTCATCTTTCTTGTTGGTATTTTCATGTCATCTTGGTTGGGAGCTTCTGTTCTTACTCTTGGTGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACACGGCCTCAAAGCAAATTAGTACTGCAATATCACCAGGTAAAAGCAATGAAAACTTTACTCTTATTATAATTTCTATCCATTTATCTCGGTATTGACACTCTGAAAAATGGGCCTCAGATCAAACTTCAAATGCCTTCAAGGAGGTAGCAATTATCAGGCACCCCCATGCTGGCAAGTATGCTTTTGGATTCATCACTTCCTCCGTTGTTCTTCAGAGCAGAATGGAAGAGGAAGAACTCTATTGTGTTTATGTCCCTACTAATCATCTCTATCTTGGAGACATATTTTTAATGAGTTCCAAGGACATCCTGAGGCCTAATCTATCTGTCCGAGAGGGAATTGGTATGATCTCTCCCAAAAATAAAGAAAACCATTTAAACATTAGTAATTTGAGCAGGAGGTGGATTCTTTGTTTTTTCTAGAATACACTGTTTAACATGAGATGTCATAAAAGAAGCTTACGGGTTAATATCGATTTTCTAAGTGTTTAAAAAGTATTTTAGGTTCAAAAAGAATATATTTTGAAGTACTTGGAAAGTCAATCCAAATAGATCCTAAACTTAATAATTAGACGTTATGTTAATATGTAAACTTGTGCACGTAGAACAATGTAATCTCTTACGATGTGCTTATTATGAACATGGAGTTGGAATGTGAATCTCTTATAAGTATATCCAAATAGAATCTAAATCTTAATAATTAGTTTAGATGTTGGACCTTAAGTTAAACTCAGATGTAGAAGAATGTTAAGAATCTCTTGCAATGTTTTTATTATGAACATGGAATTCGATGTTCCTTTTTTTTTTTTGTGCAGAAATTGTGATCTCTGGAGGGATGTCAGTTCCTCAGATACTGACCACAGTGGATGCAAGAGTAATTCCAACAAGTGGAATCGAAAAACTTTGCAAAACCAAAAGTATGGTATGATGATCAGTGGGTGAATATTTCATCCATCCATGTAGAAAATGGCAGTTTTTACAGTTTTGTCAATTCAAAATGACATGAAACTGAGTCTCGGGCCTGTCATCCCATCTTCAGTAAGCTGTAATGGGAACAACCTGCAAATTGGAAAAGTGGCTCAAATTCTTTAGAAACAAACAGGAAGAAATATTACCAAACGTTATATTTTTCCAGATCTATGATTTGGTTCTTCAGAGCTTTCACTTTTGGGATGGGGAGCTTTCTCCCTTTATTTTTGAGTTGTATATGTTTACCCATGTTCCATGACATAGAAATTTTGTTATTTTTCTAGTTCTCCAAGATTCTTTCTCAACTCTGATTAGAAAAACAATGAAATTTTTTTCATCCATACAACTTGAAATTGGAGCTCTCTCACATCTCAAAATTATATCATTTGAAGACCAGAATACATAGAGTTTCACATAACCACACAAAATTACTAGCTTTTTTGCAATTGTTTTGTTTCTCTTTTTTTCTTGATAGGTATGCTGGGAAGTAAAGAAGATGAGAACATCAATAGATTGGTTGAATTATAAAGTCAATGTGGATAACCCTCTTGGGATTTAGCAGGCAATGAAGCCAATTTGAGCTTCATTTCATTGTTACAATACGAAAAGGCTTTAGAGTACTGA

mRNA sequence

AAAAAAGACTCAAAATGTGATTCTAAAATCAAAGTGGAGAGAGGAAAAAAAAAACCAAAACGGAAATGAGTACAAGAGAGAGGGAACGAGATCTAGAGCTTTTGATCCCAGTCGCTACAGTTTCTGAAAATGGAGCCTCCAAATCTTCCTCCGTCCCCGCTGCCGCTTTATCCAATCATCATTCCGGCCGAGAGGCATTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACATGGGGCTTCATTCGTTTTGTTGATGGTTTCTTCTCACCAATATATAATCACTTAGGGATTAATATTTTTGGGCTTGGGTTTATTACCTCCATCACATTCATCTTTCTTGTTGGTATTTTCATGTCATCTTGGTTGGGAGCTTCTGTTCTTACTCTTGGTGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACACGGCCTCAAAGCAAATTAGTACTGCAATATCACCAGATCAAACTTCAAATGCCTTCAAGGAGGTAGCAATTATCAGGCACCCCCATGCTGGCAAGTATGCTTTTGGATTCATCACTTCCTCCGTTGTTCTTCAGAGCAGAATGGAAGAGGAAGAACTCTATTGTGTTTATGTCCCTACTAATCATCTCTATCTTGGAGACATATTTTTAATGAGTTCCAAGGACATCCTGAGGCCTAATCTATCTGTCCGAGAGGGAATTGAAATTGTGATCTCTGGAGGGATGTCAGTTCCTCAGATACTGACCACAGTGGATGCAAGAGTAATTCCAACAAGTGGAATCGAAAAACTTTGCAAAACCAAAAGCAATGAAGCCAATTTGAGCTTCATTTCATTGTTACAATACGAAAAGGCTTTAGAGTACTGA

Coding sequence (CDS)

ATGAGTACAAGAGAGAGGGAACGAGATCTAGAGCTTTTGATCCCAGTCGCTACAGTTTCTGAAAATGGAGCCTCCAAATCTTCCTCCGTCCCCGCTGCCGCTTTATCCAATCATCATTCCGGCCGAGAGGCATTTGCTAAAGTCATTCGCAGCTGGGCGTCGAAGAAGTTCATGACAGGATGTGTAATTCTTCTACCAATTGCTATTACATTCTACATCACATGGGGCTTCATTCGTTTTGTTGATGGTTTCTTCTCACCAATATATAATCACTTAGGGATTAATATTTTTGGGCTTGGGTTTATTACCTCCATCACATTCATCTTTCTTGTTGGTATTTTCATGTCATCTTGGTTGGGAGCTTCTGTTCTTACTCTTGGTGAATGGTTCATAAAGAAAATGCCACTTGTAAGCTATATTTACACGGCCTCAAAGCAAATTAGTACTGCAATATCACCAGATCAAACTTCAAATGCCTTCAAGGAGGTAGCAATTATCAGGCACCCCCATGCTGGCAAGTATGCTTTTGGATTCATCACTTCCTCCGTTGTTCTTCAGAGCAGAATGGAAGAGGAAGAACTCTATTGTGTTTATGTCCCTACTAATCATCTCTATCTTGGAGACATATTTTTAATGAGTTCCAAGGACATCCTGAGGCCTAATCTATCTGTCCGAGAGGGAATTGAAATTGTGATCTCTGGAGGGATGTCAGTTCCTCAGATACTGACCACAGTGGATGCAAGAGTAATTCCAACAAGTGGAATCGAAAAACTTTGCAAAACCAAAAGCAATGAAGCCAATTTGAGCTTCATTTCATTGTTACAATACGAAAAGGCTTTAGAGTACTGA

Protein sequence

MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQILTTVDARVIPTSGIEKLCKTKSNEANLSFISLLQYEKALEY

Homology

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BLAST of Lsi04G016530 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.1e-100
Identity = 187/247 (75.71%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 6   RERDLELLIPVATVSENGASKSSSVPAAALSN--HHSGREAFAKVIRSWASKKFMTGCVI 65
           RERDLE LIP+     +      SVP + L++  H +G+EA  KVIRSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY HLGIN+FGLGF+TSITFIF+VG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSSV 185
           L++GEWFIKKMPLVSYIY+ASKQIS AISPDQ+S AFKEVAIIRHPH G+YAFGFITS+V
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 186 VLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQILT 245
           +L+ R   EEL CVYVPTNHLYLGDIFL+SSKDI+RPNLSVREGIEIVISGGMS+P +LT
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 246 TVDARVI 251
           T+D+  I
Sbjct: 244 TLDSETI 250

[Close]

BLAST of Lsi04G016530 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2)

HSP 1 Score: 350.5 bits (898), Expect = 1.8e-95
Identity = 180/244 (73.77%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 6   RERDLELLIPVA---TVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTGCV 65
           RERD ELLIPVA      +  +SK SS  +A+ S+H S  E  +  IR WASKKFMTGCV
Sbjct: 13  RERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCV 72

Query: 66  ILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGAS 125
           ILLPIAITFYITW FI FVDGFFSPIY  LGIN+FG GF+TSI FIFLVG+FMSSWLGAS
Sbjct: 73  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGAS 132

Query: 126 VLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSS 185
           VL LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHP  G+YAFGFITS+
Sbjct: 133 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 192

Query: 186 VVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQIL 245
           VVLQ+   EEEL CVYVPTNHLY+GDI L++S D++RPNLSVREGIEIV+SGGMS+PQIL
Sbjct: 193 VVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 252

Query: 246 TTVD 247
           +TVD
Sbjct: 253 STVD 256

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BLAST of Lsi04G016530 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.7e-95
Identity = 178/243 (73.25%), Postives = 203/243 (83.54%), Query Frame = 0


Query: 6   RERDLELLIPVATV--SENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTGCVI 65
           RERD ELLIPVA     ++G+S   S  ++A S+H SG E  +  IR WASKKFMTGCVI
Sbjct: 4   RERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY  LGINIFG GF+TSI FIFLVG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSSV 185
           L LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHP  G+YAFGFITS+V
Sbjct: 124 LNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTV 183

Query: 186 VLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQILT 245
           VLQ+   EEEL CVYVPTNHLY+GDI L++S D++RPNLSVREGIEIV+SGGMS+PQIL+
Sbjct: 184 VLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILS 243

Query: 246 TVD 247
           T+D
Sbjct: 244 TLD 246

[Close]

BLAST of Lsi04G016530 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-77
Identity = 143/211 (67.77%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 36  SNHHSGREAFAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGIN 95
           S + S R+A   V++SW SKKFMTG V+L P+A+TF ITW FI+FVDGFFSPIY +LG++
Sbjct: 32  SPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVD 91

Query: 96  IFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQ 155
           IFGLGFITS+ F F VGIF SSWLG++V  LGE FI++MP V +IY+ASKQISTAISPDQ
Sbjct: 92  IFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQ 151

Query: 156 TSNAFKEVAIIRHPHAGKYAFGFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSK 215
            + AFKEVAIIRHP  G+YAFGFITSSV LQ+   EEEL  VYVPTNHLY+GD+FL+SS+
Sbjct: 152 NTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSE 211

Query: 216 DILRPNLSVREGIEIVISGGMSVPQILTTVD 247
           +I+RPNLS+REGIEI++S GM++PQ+++ VD
Sbjct: 212 EIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

[Close]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL
Match: A0A6J1C9T6 (protein LIKE COV 3-like OS=Momordica charantia OX=3673 GN=LOC111009635 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.8e-134
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSS PAA L NHHSGREAFAKVIRSWASKKFM+G
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSAPAAPLPNHHSGREAFAKVIRSWASKKFMSG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFVTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHP AG+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240

Query: 241 ILTTVDARVIP-TSGIEKLCKTKS 264
           ILTTVDAR IP T GIEKLCKTKS
Sbjct: 241 ILTTVDARAIPSTGGIEKLCKTKS 264

[Close]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL
Match: A0A6J1IZG0 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481287 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132
Identity = 245/264 (92.80%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSSVP AALS+HHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIYTASKQIS AISPDQTSNAFKEVAIIRHP +G+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGD+ LMSSKDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 ILTTVDARVIPTSGIEKLCKTKSN 265
           ILTTVDAR +PT G++KLCKTKS+
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSS 264

[Close]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL
Match: A0A6J1FJX0 (protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446112 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.9e-132
Identity = 245/263 (93.16%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSSVP AALS+HHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIYTASKQIS AISPDQTSNAFKEVAIIRHP +G+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGD+ LMSSKDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 ILTTVDARVIPTSGIEKLCKTKS 264
           ILTTVDAR +PT G++KLCKTKS
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKS 263

[Close]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL
Match: A0A5D3D7W1 (Protein LIKE COV 1-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00080 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 252/281 (89.68%), Postives = 258/281 (91.81%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           MSTRERERDLELLIPVATVSENGASKSS+ P AALSNHHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MSTRERERDLELLIPVATVSENGASKSSTGPVAALSNHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFLTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLT+GEWFIKKMPLVSYIYTASKQISTAISPDQTS+AFKEVAIIRHP AG+YAFGFIT
Sbjct: 121 ASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSHAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSVVLQ RMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVVLQRRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 ILTTVDA------------------RVIPTSGIEKLCKTKS 264
           ILTTVDA                  R IPTSGIEKLCKTKS
Sbjct: 241 ILTTVDARAMPTNVDARAMPTSVDPRAIPTSGIEKLCKTKS 281

[Close]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL
Match: A0A0A0LDU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855420 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.8e-131
Identity = 252/282 (89.36%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           MSTRERERDLELLIPVATVSENGASKSSS P AALSNHHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MSTRERERDLELLIPVATVSENGASKSSSGPVAALSNHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLT+GEWFIKKMPLVSYIYTASKQISTAISPDQTS+AFKEVAIIRHP AG+YAFGFIT
Sbjct: 121 ASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSHAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQ RMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ
Sbjct: 181 SSVILQRRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240

Query: 241 ILTTVDARVIPTS-------------------GIEKLCKTKS 264
           ILTTVDAR +PTS                   GIEKL KTKS
Sbjct: 241 ILTTVDARAMPTSVDARAMPTSVDPRAIPTSTGIEKLSKTKS 282

[Close]

BLAST of Lsi04G016530 vs. NCBI nr
Match: XP_038905657.1 (protein LIKE COV 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 256/263 (97.34%), Postives = 259/263 (98.48%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M+TRERERDLELLIPVATVSENGASKSSSVPAA LSNHHSGREAFAKVIRSWASKKFMTG
Sbjct: 30  MNTRERERDLELLIPVATVSENGASKSSSVPAATLSNHHSGREAFAKVIRSWASKKFMTG 89

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 90  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 149

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLT+GEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHP AG+YAFGFIT
Sbjct: 150 ASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 209

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ
Sbjct: 210 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 269

Query: 241 ILTTVDARVIPTSGIEKLCKTKS 264
           ILTTVDAR IPTSG EKLCKTKS
Sbjct: 270 ILTTVDARAIPTSGSEKLCKTKS 292

[Close]

BLAST of Lsi04G016530 vs. NCBI nr
Match: XP_038905656.1 (protein LIKE COV 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 490.7 bits (1262), Expect = 8.3e-135
Identity = 256/267 (95.88%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M+TRERERDLELLIPVATVSENGASKSSSVPAA LSNHHSGREAFAKVIRSWASKKFMTG
Sbjct: 30  MNTRERERDLELLIPVATVSENGASKSSSVPAATLSNHHSGREAFAKVIRSWASKKFMTG 89

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIF----GLGFITSITFIFLVGIFMS 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIF    GLGFITSITFIFLVGIFMS
Sbjct: 90  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFEISAGLGFITSITFIFLVGIFMS 149

Query: 121 SWLGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAF 180
           SWLGASVLT+GEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHP AG+YAF
Sbjct: 150 SWLGASVLTIGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAF 209

Query: 181 GFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGM 240
           GFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGM
Sbjct: 210 GFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGM 269

Query: 241 SVPQILTTVDARVIPTSGIEKLCKTKS 264
           SVPQILTTVDAR IPTSG EKLCKTKS
Sbjct: 270 SVPQILTTVDARAIPTSGSEKLCKTKS 296

[Close]

BLAST of Lsi04G016530 vs. NCBI nr
Match: XP_022138471.1 (protein LIKE COV 3-like [Momordica charantia])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 252/264 (95.45%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSS PAA L NHHSGREAFAKVIRSWASKKFM+G
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSAPAAPLPNHHSGREAFAKVIRSWASKKFMSG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGF+TSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFVTSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHP AG+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPRAGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240

Query: 241 ILTTVDARVIP-TSGIEKLCKTKS 264
           ILTTVDAR IP T GIEKLCKTKS
Sbjct: 241 ILTTVDARAIPSTGGIEKLCKTKS 264

[Close]

BLAST of Lsi04G016530 vs. NCBI nr
Match: XP_022982481.1 (protein LIKE COV 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 2.9e-132
Identity = 245/264 (92.80%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSSVP AALS+HHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIYTASKQIS AISPDQTSNAFKEVAIIRHP +G+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGD+ LMSSKDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 ILTTVDARVIPTSGIEKLCKTKSN 265
           ILTTVDAR +PT G++KLCKTKS+
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKSS 264

[Close]

BLAST of Lsi04G016530 vs. NCBI nr
Match: XP_022940542.1 (protein LIKE COV 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 481.9 bits (1239), Expect = 3.8e-132
Identity = 245/263 (93.16%), Postives = 255/263 (96.96%), Query Frame = 0


Query: 1   MSTRERERDLELLIPVATVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTG 60
           M TRERERDLELLIPVATVSENGASKSSSVP AALS+HHSGREAFAKVIRSWASKKFMTG
Sbjct: 1   MGTRERERDLELLIPVATVSENGASKSSSVPTAALSHHHSGREAFAKVIRSWASKKFMTG 60

Query: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLG 120
           CVILLPIAITFYITWGFIRFVDGFFSPIY+HLGINIFGLGFITSITFIFLVGIFMSSWLG
Sbjct: 61  CVILLPIAITFYITWGFIRFVDGFFSPIYHHLGINIFGLGFITSITFIFLVGIFMSSWLG 120

Query: 121 ASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFIT 180
           ASVLTLGEWFIKKMP VSYIYTASKQIS AISPDQTSNAFKEVAIIRHP +G+YAFGFIT
Sbjct: 121 ASVLTLGEWFIKKMPFVSYIYTASKQISIAISPDQTSNAFKEVAIIRHPRSGEYAFGFIT 180

Query: 181 SSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQ 240
           SSV+LQSRMEEEELYCVYVPTNHLYLGD+ LMSSKDILRPNLSVREGIEIVISGG+SVPQ
Sbjct: 181 SSVILQSRMEEEELYCVYVPTNHLYLGDVVLMSSKDILRPNLSVREGIEIVISGGLSVPQ 240

Query: 241 ILTTVDARVIPTSGIEKLCKTKS 264
           ILTTVDAR +PT G++KLCKTKS
Sbjct: 241 ILTTVDARALPTGGVQKLCKTKS 263

[Close]

BLAST of Lsi04G016530 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 )

HSP 1 Score: 366.3 bits (939), Expect = 2.2e-101
Identity = 187/247 (75.71%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 6   RERDLELLIPVATVSENGASKSSSVPAAALSN--HHSGREAFAKVIRSWASKKFMTGCVI 65
           RERDLE LIP+     +      SVP + L++  H +G+EA  KVIRSWASKKFMTGCVI
Sbjct: 4   RERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY HLGIN+FGLGF+TSITFIF+VG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSSV 185
           L++GEWFIKKMPLVSYIY+ASKQIS AISPDQ+S AFKEVAIIRHPH G+YAFGFITS+V
Sbjct: 124 LSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFITSTV 183

Query: 186 VLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQILT 245
           +L+ R   EEL CVYVPTNHLYLGDIFL+SSKDI+RPNLSVREGIEIVISGGMS+P +LT
Sbjct: 184 ILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPHMLT 243

Query: 246 TVDARVI 251
           T+D+  I
Sbjct: 244 TLDSETI 250

[Close]

BLAST of Lsi04G016530 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) )

HSP 1 Score: 349.7 bits (896), Expect = 2.1e-96
Identity = 179/244 (73.36%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 6   RERDLELLIPVA---TVSENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTGCV 65
           RERD ELLIPVA      +  +SK SS  +A+ S+H S  E  +  IR WASKKFMTGCV
Sbjct: 13  RERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCV 72

Query: 66  ILLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGAS 125
           ILLPIAITFYITW FI FVDGFFSPIY  LGIN+FG GF+TSI FIFLVG+FMSSWLGAS
Sbjct: 73  ILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGAS 132

Query: 126 VLTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSS 185
           VL LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHP  G+YAFGFITS+
Sbjct: 133 VLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITST 192

Query: 186 VVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQIL 245
           VVLQ+   EEEL CVYVPTNHLY+GD+ L++S D++RPNLSVREGIEIV+SGGMS+PQIL
Sbjct: 193 VVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGIEIVVSGGMSMPQIL 252

Query: 246 TTVD 247
           +TVD
Sbjct: 253 STVD 256

[Close]

BLAST of Lsi04G016530 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 )

HSP 1 Score: 348.6 bits (893), Expect = 4.7e-96
Identity = 178/243 (73.25%), Postives = 203/243 (83.54%), Query Frame = 0


Query: 6   RERDLELLIPVATV--SENGASKSSSVPAAALSNHHSGREAFAKVIRSWASKKFMTGCVI 65
           RERD ELLIPVA     ++G+S   S  ++A S+H SG E  +  IR WASKKFMTGCVI
Sbjct: 4   RERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVI 63

Query: 66  LLPIAITFYITWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSSWLGASV 125
           LLPIA+TFY TW FI FVDGFFSPIY  LGINIFG GF+TSI FIFLVG+FMSSWLGASV
Sbjct: 64  LLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASV 123

Query: 126 LTLGEWFIKKMPLVSYIYTASKQISTAISPDQTSNAFKEVAIIRHPHAGKYAFGFITSSV 185
           L LGEWFIK+MP V +IY ASKQISTAISPDQ + AFKEVAIIRHP  G+YAFGFITS+V
Sbjct: 124 LNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTV 183

Query: 186 VLQSRMEEEELYCVYVPTNHLYLGDIFLMSSKDILRPNLSVREGIEIVISGGMSVPQILT 245
           VLQ+   EEEL CVYVPTNHLY+GDI L++S D++RPNLSVREGIEIV+SGGMS+PQIL+
Sbjct: 184 VLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILS 243

Query: 246 TVD 247
           T+D
Sbjct: 244 TLD 246

[Close]

BLAST of Lsi04G016530 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 )

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-78
Identity = 143/211 (67.77%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 36  SNHHSGREAFAKVIRSWASKKFMTGCVILLPIAITFYITWGFIRFVDGFFSPIYNHLGIN 95
           S + S R+A   V++SW SKKFMTG V+L P+A+TF ITW FI+FVDGFFSPIY +LG++
Sbjct: 32  SPNSSTRKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVD 91

Query: 96  IFGLGFITSITFIFLVGIFMSSWLGASVLTLGEWFIKKMPLVSYIYTASKQISTAISPDQ 155
           IFGLGFITS+ F F VGIF SSWLG++V  LGE FI++MP V +IY+ASKQISTAISPDQ
Sbjct: 92  IFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQ 151

Query: 156 TSNAFKEVAIIRHPHAGKYAFGFITSSVVLQSRMEEEELYCVYVPTNHLYLGDIFLMSSK 215
            + AFKEVAIIRHP  G+YAFGFITSSV LQ+   EEEL  VYVPTNHLY+GD+FL+SS+
Sbjct: 152 NTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSE 211

Query: 216 DILRPNLSVREGIEIVISGGMSVPQILTTVD 247
           +I+RPNLS+REGIEI++S GM++PQ+++ VD
Sbjct: 212 EIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242

The following BLAST results are available for this feature:

BLAST of Lsi04G016530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQJ6	3.1e-100	75.71	Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1	[more]
F4IUE7	1.8e-95	73.77	Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 ...	[more]
Q8VY49	6.7e-95	73.25	Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1	[more]
Q9C8C1	1.6e-77	67.77	Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1	[more]

BLAST of Lsi04G016530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9T6	5.8e-134	95.45	protein LIKE COV 3-like OS=Momordica charantia OX=3673 GN=LOC111009635 PE=4 SV=1	[more]
A0A6J1IZG0	1.4e-132	92.80	protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481287 P...	[more]
A0A6J1FJX0	1.9e-132	93.16	protein LIKE COV 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446112...	[more]
A0A5D3D7W1	1.2e-131	89.68	Protein LIKE COV 1-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LDU8	7.8e-131	89.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855420 PE=4 SV=1	[more]

BLAST of Lsi04G016530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905657.1	1.5e-136	97.34	protein LIKE COV 1-like isoform X2 [Benincasa hispida]	[more]
XP_038905656.1	8.3e-135	95.88	protein LIKE COV 1-like isoform X1 [Benincasa hispida]	[more]
XP_022138471.1	1.2e-133	95.45	protein LIKE COV 3-like [Momordica charantia]	[more]
XP_022982481.1	2.9e-132	92.80	protein LIKE COV 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022940542.1	3.8e-132	93.16	protein LIKE COV 1-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lsi04G016530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18460.1	2.2e-101	75.71	like COV 3	[more]
AT2G20120.1	2.1e-96	73.36	Protein of unknown function (DUF502)	[more]
AT2G20130.1	4.7e-96	73.25	like COV 1	[more]
AT1G43130.1	1.2e-78	67.77	like COV 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007462	Protein of unknown function DUF502	PFAM	PF04367	DUF502	coord: 102..203 e-value: 1.4E-27 score: 95.6
None	No IPR available	PANTHER	PTHR31876:SF20	PROTEIN LIKE COV 1-LIKE	coord: 1..251
None	No IPR available	PANTHER	PTHR31876	COV-LIKE PROTEIN 1	coord: 1..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G016530.1	Lsi04G016530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane