Lsi04G016520 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G016520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	outer envelope pore protein 24, chloroplastic-like
Location	chr04: 23986574 .. 23989604 (-)
RNA-Seq Expression	Lsi04G016520
Synteny	Lsi04G016520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATATTGTTTTACATCTGGACAGGGTTAGACCTCGCTTATCTCCTTCCCTATTAACAATGAAGGCAACTCTGAAGACCAAGTACGACGCAGACAAAAGCGGCGCCGCCTCGACTTTGGCTGTCAACGCCGGCGATGTCAAGCTCCGAGCATCCATTACCGATGCCACAATCATTAACGGTCCTAGTTTAAATGGCCTTGCTCTTGCCGTTGAGAAACCAGGCTTCTTCATAGTCGACTACAATGTCCCCAAAAAGGTACGCTGACTGTTCAATTTTTCAGATTCTAATGGCTTTTCGATGGCTGCGAATTCAGAGGATAGAATTTCACGAAGTGAAACATCTTGGTGGGGGTGGAATTTGGCTTTTGTCTATCTTACCTACCAGTCTGAACCATTTGGTTTAATCTATAATAAATTTGGCACTGGAGTTTACGGAAATTGGAGTATGTAATTGTTTAGGCTGGACCTGAAATTGATTCATTGTATTTCAGAGTTTAATCTGATTCTTTTGCTGGAAGCTTGAGTTAGGTTTCTCTAGAATTCATTTTCCCCCTTCGCATCATCAAATTCAATATTGTGCTAACTTGTTTTGTTATTGCATGCTATTGTACAGGATCTTCGCTTTCAGTTTATGAATACTGTTAAGGTAGCGGAGAAGCCTTTGAATTTGACTTACATCCATAGTTGGGCCGATAACAGAACAGTTGTCGATGGGACCCTAGTCATCGATTCGGCTAACAAGGTTTCTGCTAATCACGCTCTTGGCTCTGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACTACTTTTGAACCTTCTTACGATGTTGCAAAGAATTCTTGGGACTTTGCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCTACGTACCAGACTACATCCAAGGCACTGGGATTAGAATGGACAAGGAATTTAAAGTCAAGCGGAAATTTCAAGGTAGGTAATCTTGTCATTATATTTCTGTACTTTTTGAATGCTTGTTAATTGCGTAAATCAAAATTTCAAGTACTTTTTCTGGATAGGGAAATTCCCTATGGATAAACCACTATTGGGGACTTTGATATATTGTAATTCTATCCAACCATATATGTAAAATGCACATCTTTTGTACAGTAAAAATGGAATTTAACTCTAGTTGTCTAATTCTTGTAGAACACATCCTAATAATTATCTATACGCAGTTGGTCAAACAGTAAGCACTTAATTTGAAAGAATGTCTGGCCTGGAAGTTCCAAGGGCTACAGAAAGTATGAATCTTTTTTGTTCAGCTCAGAGTGTAAGACCAAACATTCATCATCCAGAAAATCATTACCCAATAATGTAAGTAAAGAGCCCCAGAAGATGATCCTTGTAGTAAAGAATTGAGACATTTGGGGGGGAAGTTCTCTAGATTCATGGATTTGAGCCTCCAGGTGGAAAGTTTTAATAAGTGAAATCACCGAACTGTTTTAGGTCTTCTAGAGGCAATGTTGGGGTGTTTGAAATCTCCATATGGGTTACTGGGAGTAGGCCCTGATACTATGATTATAAAGAGAATGGAAGGGAGACTTCCTTGCAGGAAATGACAACCAGGAAGTTCTATGAGAATTTTGAATTGTTCCTTAAAATATTCAATATTCTGAACTTTTAATTTATGGTTAGGTATTCCCCTGGACCTTTAAAAGAAAACCATCCCATTGGATTGGTATCTTCACCCCGGTGTCAATATATGTAAATGAGATACAGGGTTTTAAATAGGAATTACTTGGTTTTCTACTGACTTAGCATCTGGTAATCTGATGTTTGATGACAGGGTTTTTTGAAAATACATTCATGTTTGGTCTGTGGTGAGTATTATTTGGGGACTTTATCATCTTATCTTTGAAAAATCTCCCTTTCCCACGTGGGGGACTTGAGGAAATTCAAGACATGTTTATTAGTCTGGGCCATGCACTAGTGCTTGAAAAGAAAACAAACAGGATAATCACAGTCTTTGAGTTGGGCTCTGGCTTCAAAAATTGTCAACTGTTACTTGGTCTTGAAGTAGTCAATAGATTAATAGTCAGTGTTGAGTTTCTCAATGCCGTTTTGAGTTATGTATTGAGATGAAACACATTTCTTTTACCAACAGTTGCAAGAGAAGGGTTCACCAAAAATCTTTCTCAAGAGTGTTAGGAAGTTTAAAACACCAAAATTTGTTTGAAAAAGGGTTGATGAAAGCGTTTCCATCCAGAGAATTTAATGAGTAGGTCACGGGCAATAAGAAGATTTTGCGTGACCTTCTGATTAATATGGCAGTATTAACATTCTGGGATAACAACTGCTGTGTAGTTTCAGTGGAACTGGTTAGTATGTAACTAGATTGTTTATCCCTGATGGCAAAGGTAACTGTTAAGTATTAACATTCTGGGATAAAAATGTAGTGGCTGGCACCCGAGTCAGTTATCGGCTCGGTGGTAGTTGATGAGTTATTCCCAACCCGAACGTGATAGGAGCCTTCAATTTTAAGTTCTATATTCTTTTTAATCAATTCGAATGCTATTCACTGTTTTGAAATGAAAGGGTATGGTAATGCAGGCTTTCAGGTCAGTTCTTTTTAACTCATTTTTTGTTGTGCAGATTGTAGCATCGGTCAATATGGCAGATGAATCAAAAAGGCCAAAAGTAACTGCAGAATCGACATGGAACTTCGAAGTGTAATTTTCAAATCAATCTTCCCTTTTAATTCCTGTTGTGATTTACTGTGGAGTTTCCTAAATACATTTTAATGATTGAAACTGAGAATACTTTGTGCACTGAAAATTTAACTACACCTCAATAATCATAAGAAGCAGTTCTTTTGAAGTGACTTTGTCACTTTCATTTTTCTCATGCTCTGCTCTTTTAATTGCTCGTATCATTTAAAAGGGTAGAGTATTTTTTCTTTTTTTTCAAATATAATAATAATAATTTTTTTTTACAATGTAAGGCAAAAGATTATCAATTTGAATAAAGAAGATAAAAATAATCACCC

mRNA sequence

GAAAATATTGTTTTACATCTGGACAGGGTTAGACCTCGCTTATCTCCTTCCCTATTAACAATGAAGGCAACTCTGAAGACCAAGTACGACGCAGACAAAAGCGGCGCCGCCTCGACTTTGGCTGTCAACGCCGGCGATGTCAAGCTCCGAGCATCCATTACCGATGCCACAATCATTAACGGTCCTAGTTTAAATGGCCTTGCTCTTGCCGTTGAGAAACCAGGCTTCTTCATAGTCGACTACAATGTCCCCAAAAAGGATCTTCGCTTTCAGTTTATGAATACTGTTAAGGTAGCGGAGAAGCCTTTGAATTTGACTTACATCCATAGTTGGGCCGATAACAGAACAGTTGTCGATGGGACCCTAGTCATCGATTCGGCTAACAAGGTTTCTGCTAATCACGCTCTTGGCTCTGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACTACTTTTGAACCTTCTTACGATGTTGCAAAGAATTCTTGGGACTTTGCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCTACGTACCAGACTACATCCAAGGCACTGGGATTAGAATGGACAAGGAATTTAAAGTCAAGCGGAAATTTCAAGGTAGAACACATCCTAATAATTATCTATACGCAGTTGGTCAAACACTCAGAGTGTAAGACCAAACATTCATCATCCAGAAAATCATTACCCAATAATATTGTAGCATCGGTCAATATGGCAGATGAATCAAAAAGGCCAAAAGTAACTGCAGAATCGACATGGAACTTCGAAGTGTAATTTTCAAATCAATCTTCCCTTTTAATTCCTGTTGTGATTTACTGTGGAGTTTCCTAAATACATTTTAATGATTGAAACTGAGAATACTTTGTGCACTGAAAATTTAACTACACCTCAATAATCATAAGAAGCAGTTCTTTTGAAGTGACTTTGTCACTTTCATTTTTCTCATGCTCTGCTCTTTTAATTGCTCGTATCATTTAAAAGGGTAGAGTATTTTTTCTTTTTTTTCAAATATAATAATAATAATTTTTTTTTACAATGTAAGGCAAAAGATTATCAATTTGAATAAAGAAGATAAAAATAATCACCC

Coding sequence (CDS)

GAAAATATTGTTTTACATCTGGACAGGGTTAGACCTCGCTTATCTCCTTCCCTATTAACAATGAAGGCAACTCTGAAGACCAAGTACGACGCAGACAAAAGCGGCGCCGCCTCGACTTTGGCTGTCAACGCCGGCGATGTCAAGCTCCGAGCATCCATTACCGATGCCACAATCATTAACGGTCCTAGTTTAAATGGCCTTGCTCTTGCCGTTGAGAAACCAGGCTTCTTCATAGTCGACTACAATGTCCCCAAAAAGGATCTTCGCTTTCAGTTTATGAATACTGTTAAGGTAGCGGAGAAGCCTTTGAATTTGACTTACATCCATAGTTGGGCCGATAACAGAACAGTTGTCGATGGGACCCTAGTCATCGATTCGGCTAACAAGGTTTCTGCTAATCACGCTCTTGGCTCTGGAAATTGTAAATTGAAGTACACCTACGTGCACGAGGGGGCGACTACTTTTGAACCTTCTTACGATGTTGCAAAGAATTCTTGGGACTTTGCTGTTTCAAGGAAGGTTTATGGTGATGATGTATTCAAGGCTACGTACCAGACTACATCCAAGGCACTGGGATTAGAATGGACAAGGAATTTAAAGTCAAGCGGAAATTTCAAGGTAGAACACATCCTAATAATTATCTATACGCAGTTGGTCAAACACTCAGAGTGTAAGACCAAACATTCATCATCCAGAAAATCATTACCCAATAATATTGTAGCATCGGTCAATATGGCAGATGAATCAAAAAGGCCAAAAGTAACTGCAGAATCGACATGGAACTTCGAAGTGTAA

Protein sequence

ENIVLHLDRVRPRLSPSLLTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTWNFEV

Homology

[Close]

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot
Match: Q8H0Y1 (Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24B PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.7e-80
Identity = 150/246 (60.98%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 19  LTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFI 78
           + MKA++K KYD DK+    +LA NAGD+KLRA++TDAT++ GP+L GLALAVEKPG FI
Sbjct: 1   MAMKASIKGKYDTDKTSGIGSLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 79  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGS 138
           V+YNVPKKD+RFQFMNTV++AEKPLNLTYIHS ADNRT+VDG+LVIDSANK+SANH +G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 139 GNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRN 198
            NCK+KYTY H G  TFEP YD+AKN+WDFAVSR+ Y  D  +ATYQT+SK LG+EW+RN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 199 LKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAES 258
            K+SG FKV                                 ASVN+ADE K PK+TAE+
Sbjct: 181 NKASG-FKV--------------------------------CASVNLADELKTPKLTAET 213

Query: 259 TWNFEV 265
           TWN E+
Sbjct: 241 TWNLEM 213

[Close]

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot
Match: O49929 (Outer envelope pore protein 24, chloroplastic OS=Pisum sativum OX=3888 GN=OEP24 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.8e-79
Identity = 158/245 (64.49%), Postives = 177/245 (72.24%), Query Frame = 0


Query: 21  MKATLKTKYDAD-KSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIV 80
           MKA LK KYD D  S  A+T+A NAGDVKLRASITDAT  N PSL GL LAVEKPG F V
Sbjct: 1   MKAALKGKYDLDHNSSGAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFSV 60

Query: 81  DYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSG 140
           DYNVPKKD RFQFMNTV+VAEKPLNL YIHS  DNRT++DGTLV D +NKVSAN+A+ SG
Sbjct: 61  DYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVESG 120

Query: 141 NCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNL 200
           NCKLKY+Y H+G TT EP+YDVAKNSWDFAVS KVYGDD  KA+YQT+SK LGLEWTRN 
Sbjct: 121 NCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDSLKASYQTSSKVLGLEWTRNS 180

Query: 201 KSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAEST 260
           K +G FKV                                VASVN+A+E K PK++ EST
Sbjct: 181 KQTGCFKV--------------------------------VASVNLAEEKKIPKLSVEST 213

Query: 261 WNFEV 265
            NFE+
Sbjct: 241 LNFEM 213

[Close]

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot
Match: Q1H5C9 (Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP24A PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.8e-79
Identity = 145/244 (59.43%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKA+ K K+D DKSG+ ++L  NAG+ KLRA++TDA+ + GPS NGL+LAVEKPGFFI+D
Sbjct: 2   MKASFKGKFDVDKSGSVASLTFNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFIID 61

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKD+RFQFMNT+++AEKPLNLTYIH   DNRT+VDG+ VID ANK+SAN+ +G+ N
Sbjct: 62  YNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGTKN 121

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVH G  TFEP YDVAKN WDFA+S K+YG D  KATYQT+SK LGLEW+ N K
Sbjct: 122 CKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNNSK 181

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           S+G+FKV                                 AS+N+A+E K PK+TAE+TW
Sbjct: 182 STGSFKV--------------------------------CASMNLAEELKPPKLTAETTW 213

Query: 261 NFEV 265
           N E+
Sbjct: 242 NLEL 213

[Close]

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot
Match: B8ANR3 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP24 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-51
Identity = 110/256 (42.97%), Postives = 152/256 (59.38%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAV--NAGDVKLRASITDATIINGPSLNGLALAVEKPGFFI 80
           MKAT+K +Y+ DK+ AA+TLA   +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLTLTLEKPGSFL 60

Query: 81  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWA--------DNRTVVDGTLVIDSANKV 140
           +D     KD+RFQFMN+  + ++ ++LTY HS            RT +DG+L  D ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKPPARTALDGSLTFDPANKL 120

Query: 141 SANHALGSGNCKLKYTYVH--EGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTS 200
           S +H LGS  C++KY+Y H  +  TT EP +D A N+WDFAV+RK  G D  KATYQ ++
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 201 KALGLEWTRNLKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADE 260
           K L L+WTR+ K   +FKV                                 AS +++D+
Sbjct: 181 KLLALDWTRDSKIGASFKV--------------------------------AASFDLSDQ 224

Query: 261 SKRPKVTAESTWNFEV 265
           SK PK+ AESTWN+E+
Sbjct: 241 SKAPKLIAESTWNYEI 224

[Close]

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot
Match: Q75IQ4 (Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP24 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-51
Identity = 110/256 (42.97%), Postives = 152/256 (59.38%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAV--NAGDVKLRASITDATIINGPSLNGLALAVEKPGFFI 80
           MKAT+K +Y+ DK+ AA+TLA   +A D++ +AS TDA    GPSL GL L +EKPG F+
Sbjct: 1   MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLILTLEKPGSFL 60

Query: 81  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWA--------DNRTVVDGTLVIDSANKV 140
           +D     KD+RFQFMN+  + ++ ++LTY HS            RT +DG+L  D ANK+
Sbjct: 61  LDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKL 120

Query: 141 SANHALGSGNCKLKYTYVH--EGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTS 200
           S +H LGS  C++KY+Y H  +  TT EP +D A N+WDFAV+RK  G D  KATYQ ++
Sbjct: 121 SLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQAST 180

Query: 201 KALGLEWTRNLKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADE 260
           K L L+WTR+ K   +FKV                                 AS +++D+
Sbjct: 181 KLLALDWTRDSKIGASFKV--------------------------------AASFDLSDQ 224

Query: 261 SKRPKVTAESTWNFEV 265
           SK PK+ AESTWN+E+
Sbjct: 241 SKAPKLIAESTWNYEI 224

[Close]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL
Match: A0A5D3D7T8 (Outer envelope pore protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00030 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.7e-108
Identity = 206/244 (84.43%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLAL+VEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRT++DGTLV DSANKVSANH LGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTILDGTLVFDSANKVSANHTLGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSK LGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFKV                                VASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFKV--------------------------------VASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL
Match: A0A1S3CRS8 (outer envelope pore protein 24, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503959 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.7e-108
Identity = 206/244 (84.43%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLAL+VEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRT++DGTLV DSANKVSANH LGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTILDGTLVFDSANKVSANHTLGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSK LGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFKV                                VASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFKV--------------------------------VASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL
Match: A0A0A0LIV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855400 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 8.7e-108
Identity = 206/244 (84.43%), Postives = 210/244 (86.07%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLAL+VEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWAD+RT++DGTLV DSANKVSANHALGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSANKVSANHALGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSK LGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFKV                                VASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFKV--------------------------------VASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL
Match: A0A6J1F6M0 (outer envelope pore protein 24B, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442606 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.6e-104
Identity = 200/244 (81.97%), Postives = 207/244 (84.84%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGL+LAVEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLSLAVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTV+DG LV+DSANK SANHALGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVLDGNLVLDSANKFSANHALGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVH+ ATTFEPSYDVAKNSWDF++SRKVY DDV KATYQTT+KALGLEWTRNLK
Sbjct: 121 CKLKYTYVHKHATTFEPSYDVAKNSWDFSISRKVYDDDVLKATYQTTNKALGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFK                                IVASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFK--------------------------------IVASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL
Match: A0A6J1CF95 (outer envelope pore protein 24A, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010917 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.4e-102
Identity = 198/244 (81.15%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPL LTYIHS  DNRT++DG LV DSANKVSANH LGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLKLTYIHSRGDNRTILDGALVFDSANKVSANHVLGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEG TTFEPSYDVAKNSWDF+VSRKVYGDDVFKATYQTT+KALGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGVTTFEPSYDVAKNSWDFSVSRKVYGDDVFKATYQTTTKALGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSG+ K                                IVASVN+ADESKRPKVTAESTW
Sbjct: 181 SSGDIK--------------------------------IVASVNLADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. NCBI nr
Match: XP_038903165.1 (outer envelope pore protein 24, chloroplastic [Benincasa hispida])

HSP 1 Score: 442.2 bits (1136), Expect = 3.2e-120
Identity = 229/264 (86.74%), Postives = 232/264 (87.88%), Query Frame = 0


Query: 1   ENIVLHLDRVRPRLSPSLLTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIIN 60
           ENIVLHLDRVRPRLSPSLLTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIIN
Sbjct: 7   ENIVLHLDRVRPRLSPSLLTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIIN 66

Query: 61  GPSLNGLALAVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDG 120
           GPSLNGLALAVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTV+DG
Sbjct: 67  GPSLNGLALAVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVLDG 126

Query: 121 TLVIDSANKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVF 180
           TLV+DSANKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVF
Sbjct: 127 TLVLDSANKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVF 186

Query: 181 KATYQTTSKALGLEWTRNLKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIV 240
           KATYQTTSKALGLEWTRNLKSSGNFK                                IV
Sbjct: 187 KATYQTTSKALGLEWTRNLKSSGNFK--------------------------------IV 238

Query: 241 ASVNMADESKRPKVTAESTWNFEV 265
           ASVN+ADESKRPKVTAESTWNFEV
Sbjct: 247 ASVNLADESKRPKVTAESTWNFEV 238

[Close]

BLAST of Lsi04G016520 vs. NCBI nr
Match: XP_008466586.1 (PREDICTED: outer envelope pore protein 24, chloroplastic-like [Cucumis melo] >TYK19617.1 outer envelope pore protein 24 [Cucumis melo var. makuwa])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 206/244 (84.43%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLAL+VEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRT++DGTLV DSANKVSANH LGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTILDGTLVFDSANKVSANHTLGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSK LGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFKV                                VASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFKV--------------------------------VASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. NCBI nr
Match: XP_004147789.1 (outer envelope pore protein 24, chloroplastic [Cucumis sativus] >KGN59946.1 hypothetical protein Csa_001150 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.8e-107
Identity = 206/244 (84.43%), Postives = 210/244 (86.07%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLAL+VEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALSVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWAD+RT++DGTLV DSANKVSANHALGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSANKVSANHALGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSK LGLEWTRNLK
Sbjct: 121 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKVLGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFKV                                VASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFKV--------------------------------VASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. NCBI nr
Match: XP_023535000.1 (outer envelope pore protein 24B, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.4 bits (999), Expect = 2.4e-104
Identity = 201/244 (82.38%), Postives = 207/244 (84.84%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGL+LAVEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLSLAVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTV+DG LV+DSANK SANHALGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVLDGNLVLDSANKFSANHALGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVH+ ATTFEPSYDVAKNSWDF++SRKVY DDV KATYQTTSKALGLEWTRNLK
Sbjct: 121 CKLKYTYVHKHATTFEPSYDVAKNSWDFSISRKVYDDDVLKATYQTTSKALGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFK                                IVASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFK--------------------------------IVASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. NCBI nr
Match: XP_022935807.1 (outer envelope pore protein 24B, chloroplastic-like [Cucurbita moschata] >KAG7024203.1 Outer envelope pore protein 24B, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 5.4e-104
Identity = 200/244 (81.97%), Postives = 207/244 (84.84%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGL+LAVEKPGFFIVD
Sbjct: 1   MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLSLAVEKPGFFIVD 60

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTV+DG LV+DSANK SANHALGSGN
Sbjct: 61  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVLDGNLVLDSANKFSANHALGSGN 120

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVH+ ATTFEPSYDVAKNSWDF++SRKVY DDV KATYQTT+KALGLEWTRNLK
Sbjct: 121 CKLKYTYVHKHATTFEPSYDVAKNSWDFSISRKVYDDDVLKATYQTTNKALGLEWTRNLK 180

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           SSGNFK                                IVASVNMADESKRPKVTAESTW
Sbjct: 181 SSGNFK--------------------------------IVASVNMADESKRPKVTAESTW 212

Query: 261 NFEV 265
           NFEV
Sbjct: 241 NFEV 212

[Close]

BLAST of Lsi04G016520 vs. TAIR 10
Match: AT5G42960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 298.9 bits (764), Expect = 4.0e-81
Identity = 150/246 (60.98%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 19  LTMKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFI 78
           + MKA++K KYD DK+    +LA NAGD+KLRA++TDAT++ GP+L GLALAVEKPG FI
Sbjct: 1   MAMKASIKGKYDTDKTSGIGSLAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 79  VDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGS 138
           V+YNVPKKD+RFQFMNTV++AEKPLNLTYIHS ADNRT+VDG+LVIDSANK+SANH +G+
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 139 GNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRN 198
            NCK+KYTY H G  TFEP YD+AKN+WDFAVSR+ Y  D  +ATYQT+SK LG+EW+RN
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 199 LKSSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAES 258
            K+SG FKV                                 ASVN+ADE K PK+TAE+
Sbjct: 181 NKASG-FKV--------------------------------CASVNLADELKTPKLTAET 213

Query: 259 TWNFEV 265
           TWN E+
Sbjct: 241 TWNLEM 213

[Close]

BLAST of Lsi04G016520 vs. TAIR 10
Match: AT1G45170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits to 62 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 295.8 bits (756), Expect = 3.4e-80
Identity = 145/244 (59.43%), Postives = 179/244 (73.36%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKA+ K K+D DKSG+ ++L  NAG+ KLRA++TDA+ + GPS NGL+LAVEKPGFFI+D
Sbjct: 2   MKASFKGKFDVDKSGSVASLTFNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFIID 61

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKD+RFQFMNT+++AEKPLNLTYIH   DNRT+VDG+ VID ANK+SAN+ +G+ N
Sbjct: 62  YNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGTKN 121

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
           CKLKYTYVH G  TFEP YDVAKN WDFA+S K+YG D  KATYQT+SK LGLEW+ N K
Sbjct: 122 CKLKYTYVHGGIATFEPCYDVAKNMWDFAISHKLYGGDNLKATYQTSSKMLGLEWSNNSK 181

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           S+G+FKV                                 AS+N+A+E K PK+TAE+TW
Sbjct: 182 STGSFKV--------------------------------CASMNLAEELKPPKLTAETTW 213

Query: 261 NFEV 265
           N E+
Sbjct: 242 NLEL 213

[Close]

BLAST of Lsi04G016520 vs. TAIR 10
Match: AT1G45170.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42960.1); Has 60 Blast hits to 60 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 203.8 bits (517), Expect = 1.8e-52
Identity = 113/244 (46.31%), Postives = 143/244 (58.61%), Query Frame = 0


Query: 21  MKATLKTKYDADKSGAASTLAVNAGDVKLRASITDATIINGPSLNGLALAVEKPGFFIVD 80
           MKA+ K K+D DKSG+ ++L  NAG+ KLRA++TDA+ + GPS NGL+LAVEKPGFFI+D
Sbjct: 2   MKASFKGKFDVDKSGSVASLTFNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFIID 61

Query: 81  YNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADNRTVVDGTLVIDSANKVSANHALGSGN 140
           YNVPKKD+RFQFMNT+++AEKPLNLTYIH   DNRT+VDG+ VID ANK+SAN       
Sbjct: 62  YNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSAN------- 121

Query: 141 CKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTTSKALGLEWTRNLK 200
                                                  + ATYQT+SK LGLEW+ N K
Sbjct: 122 ---------------------------------------YMATYQTSSKMLGLEWSNNSK 167

Query: 201 SSGNFKVEHILIIIYTQLVKHSECKTKHSSSRKSLPNNIVASVNMADESKRPKVTAESTW 260
           S+G+FKV                                 AS+N+A+E K PK+TAE+TW
Sbjct: 182 STGSFKV--------------------------------CASMNLAEELKPPKLTAETTW 167

Query: 261 NFEV 265
           N E+
Sbjct: 242 NLEL 167

The following BLAST results are available for this feature:

BLAST of Lsi04G016520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0Y1	5.7e-80	60.98	Outer envelope pore protein 24B, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
O49929	4.8e-79	64.49	Outer envelope pore protein 24, chloroplastic OS=Pisum sativum OX=3888 GN=OEP24 ...	[more]
Q1H5C9	4.8e-79	59.43	Outer envelope pore protein 24A, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B8ANR3	1.5e-51	42.97	Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. indica OX=3...	[more]
Q75IQ4	1.9e-51	42.97	Outer envelope pore protein 24, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Lsi04G016520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D7T8	6.7e-108	84.43	Outer envelope pore protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CRS8	6.7e-108	84.43	outer envelope pore protein 24, chloroplastic-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LIV8	8.7e-108	84.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855400 PE=4 SV=1	[more]
A0A6J1F6M0	2.6e-104	81.97	outer envelope pore protein 24B, chloroplastic-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1CF95	1.4e-102	81.15	outer envelope pore protein 24A, chloroplastic-like OS=Momordica charantia OX=36...	[more]

BLAST of Lsi04G016520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903165.1	3.2e-120	86.74	outer envelope pore protein 24, chloroplastic [Benincasa hispida]	[more]
XP_008466586.1	1.4e-107	84.43	PREDICTED: outer envelope pore protein 24, chloroplastic-like [Cucumis melo] >TY...	[more]
XP_004147789.1	1.8e-107	84.43	outer envelope pore protein 24, chloroplastic [Cucumis sativus] >KGN59946.1 hypo...	[more]
XP_023535000.1	2.4e-104	82.38	outer envelope pore protein 24B, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935807.1	5.4e-104	81.97	outer envelope pore protein 24B, chloroplastic-like [Cucurbita moschata] >KAG702...	[more]

BLAST of Lsi04G016520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42960.1	4.0e-81	60.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G45170.1	3.4e-80	59.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G45170.2	1.8e-52	46.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034626	Outer envelope pore protein 24	PANTHER	PTHR35284	OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATED	coord: 21..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G016520.1	Lsi04G016520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034765	regulation of ion transmembrane transport
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015288	porin activity
molecular_function	GO:0022843	voltage-gated cation channel activity