Lsi04G015680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G015680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein TIC 22, chloroplastic-like
Location	chr04: 23239654 .. 23243344 (-)
RNA-Seq Expression	Lsi04G015680
Synteny	Lsi04G015680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTTAGATTTTAAATTAAGCTTAAAAAGGCTAATTTGATTTTTATTTTAGGTCAAATTTTGTCAATATCCGATAAATTTTGGGCATAATAAAAACTGAGAGCCACGCAAGAATCGGAGGTTTCTCGTGGCCATGGAGATCCCAAAACCCTACCCGCAATCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGCACCAGACTTGGAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCATTTCCTACACCACTTTTCGCGTCCCTTGCGCAGCACAGTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCCGTCTACACTGTTAGCAATTCAAATAACGAATTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCTATTGGGTTGCTGTGTTTCCGCAAAGAAGATGCCGAGACCTTTTTGGCTCAGGTTTGTCTAGCCCCTGTTTTCTTTCTCCATCCGTGAATAGTGAAATGATCGGGAAGAAGTGAGGAAAACTTGCCCCAAATCAATTTTTTGTTTCTCTTTTATTTAGTGGAATTTGTGTTTAATGATTTGGAAAATTTTATGCATTTGAAGTAAGTTTGCCATTCTAATTCTTTTGTTCAAATCTGATGTTTTATCCATAATTTTTTAGAATTCTGATGTTTATATTGCAATATGATATCTTTTATAGTGAATTTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGATCAGGTACCTTGCTTGCATCATCAACCTTTTACTTCTTGAGTATCAAACTTTTCCCCTGCTATATTTTGTTTTCCCCCCTTAATGTTCAACCGTGTAGTAGTGAAGGTTAGTGTGGGTGGTAGGCAACTGCATTTGTAGGTTTGTACTAGTACTCCTGATCAATGGTATGAGACAATGAGAGGAGCATTTACCCGATGAGATAACTCAGTTTTATTTTCCGTCATCTGGCTGGTGAAATTTTTTATCTGTGGGACCTATTAATTTGAATGTTTATTAATGTGATGGGAAGGCAGATTACATATAAATGTGGGGCCTATTAATTTGAATGTTACTTAATCTGATGGGAAGGGAGATTTGATTTTTCTTTTGCCCGTGTATTGTTTATTATCAATTATTGGGTCTTCCTCCTTCAGTTTCACTCTTACTTCTGTACTTCAATAGATTTATTTGTAGTTTCGCCTTACTTCTAATGATTCGCAGGTCTATATGTTGAAAGTAGAAGGTATTGCATTTCGCTTTTTGCCAGATCCTGTTCAGATTAAGAATGCGTTAGAGGCAAGTTTCATTTGATCTTGTCAATCTCTTGGCCCTCAGACAAAGGCTTGTGTGGTTTCTTATAAAAAAAAGGACAAAGGCTTGTGTCAATTCTATGCTACATTATAGATTCTTTCATTCGGTATCTTAATTTTAACTTTTGTAGAAATACTATTACTTATAAGAGGTAAGTTGAGATTGACTAGATACCAATTACAATAGGTTAGCCTAGTGGTCGAGGGGAAAGTTGAAAAGGTAAAATGATTATGGAGCTATAAGTTCAAATCTTGTGGCGGTCACATACTGGAGATATTAAAATCCCTAGTTCTCTTTTTTACAACCAAACCAAATTTTGTAAGCTTGATATTGTGTCACTGGCATTAATTATATTTATAATATCTAGTTGGATACCTGTTCGGTTGAACTTGCTTATGATACCTTGAAAGATGCCTTGACATTTCAATTTGGTATTTTGAGATGTTACTTTCATTTGACTTGTAACAAAACACTTACAAACAATACCCAACATTCAGAACATGCTGTATTTCTGTTGACCTGAAAATTGACTAATAATTGTATATTTTTATTTGTAGCTTAAAGCTTCGGATACCAGAAGCAGTTTCGATGGGGTCCCTGTTTTTCAGGTACGTTAGTGCACTTACACTCAAATGAAAAAAATCAGCATTGTGAAAACTCTAGAATGACCCATAAATTGAATCATTGGACACTTCCCAAATTTCTAATGCTGAACATAAACAGCTGTCAATCATGATTTTTGGTGTGCATAGTTCATAATTCATGGTTCTATTTGGGTTGACAGTTTTTATAATTGTATCTGTGTATAGTTTGGTTGACATGATCAAAATCCTGTTCACTTCTCATAATAACAAATTTTGTTTTCTTTTTACAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGTCTGTATGCATATAATTTCTGAGGAACTATGGATCGTAGATGCATCTAACCATTTACTGGATATATAGGAAGATATAGAAAAGGAACTGTTGAAGGTCTCAAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATGGTATGGTTTCTATCATTTTTTCTTTGGTATGTTCTATTCATTGAATGGGTTAAACTTTTTAGCTTGATCAGTGGCCAGTGCTCCCTGTCATATGGTGTTTTATATTTTTCCCCCCTTCTTTTGCATTTTGATACATTATTACTTGTCACATTTTAGAAGTGATCTCTCCCATCAGAAGTGATCTCTGTTAAATGGAAAAATTGGTTTTGTTACCATTATAATTTACAGTTTAATATGTTTTTTGTCCCAAAAAATTTGAGAAATGTTAACAGTCCTATTCAGACAGATGTGGAAGTGATAGTGATGATGGAGTTGGTTTAAGCTTTAAATACAAACCAGAATGTCTTAAATTATTATCCTGCAAGTGAAAATTTGTGTATCATTGGATGTTTCTTTCTTGTGAAAAAATTATCTGTTCAGTTGGTCCACGATTATATTGTTTCTTCCCTTCATTTAACTTAAATTGTAATACAACAGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGGTAAGGTTTCTTGGTCTCAAGTAGCAGCATCTTTTAGAATATAGAAATTGTACTCCGTCTTAGTTTTCTTGATCAATTACAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGAAATAGGCTTGTGAATTCAGCCAACAGACTACACAAGAAGAATGGAAGGAGCATGGAGAGTACTGATTCAGCCAACTGAGGTTAGAAACCAATGGAATTCTGTTACAGTTGGCCTCATGGGAGATGAATAATAAACACTAATAGCCTTTTTCTCCCTCATTAGACATCACAATGGATCTGATTCAGACATTATTTTGAGAGGTTGAAGAAGCTAATGCCTTCTCTTTTACATCAAGGAGATTAGTGAAAACATTGCGGCTGGATTTCTCAGATGTGTTGAGTTTGGTTATGTTTCTGTATAGCCTCTCTGTTTGACGTAGTTTTCTTCTGTAGATTAGAATCAATGTAATTTAGCTTTTGAAATGGTTACCGTTTCTTAAGGCGCCTGTCCCATCTTGTTCAGCCGTTTGTCACCAAAATACTAAAGGACGGTTATATATATGTGGGAGACAGTCTATTCCAATATTTGATTTTCTCAATAAATGAATTCAACCATTGATTCGGTTTACTTTTGAGATAA

mRNA sequence

ATTTTTTTAGATTTTAAATTAAGCTTAAAAAGGCTAATTTGATTTTTATTTTAGGTCAAATTTTGTCAATATCCGATAAATTTTGGGCATAATAAAAACTGAGAGCCACGCAAGAATCGGAGGTTTCTCGTGGCCATGGAGATCCCAAAACCCTACCCGCAATCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGCACCAGACTTGGAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCATTTCCTACACCACTTTTCGCGTCCCTTGCGCAGCACAGTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCCGTCTACACTGTTAGCAATTCAAATAACGAATTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCTATTGGGTTGCTGTGTTTCCGCAAAGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGATCAGCTTAAAGCTTCGGATACCAGAAGCAGTTTCGATGGGGTCCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGAAGATATAGAAAAGGAACTGTTGAAGGTCTCAAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGAAATAGGCTTGTGAATTCAGCCAACAGACTACACAAGAAGAATGGAAGGAGCATGGAGAGTACTGATTCAGCCAACTGAGACATCACAATGGATCTGATTCAGACATTATTTTGAGAGGTTGAAGAAGCTAATGCCTTCTCTTTTACATCAAGGAGATTAGTGAAAACATTGCGGCTGGATTTCTCAGATGTGTTGAGTTTGGTTATGTTTCTGTATAGCCTCTCTGTTTGACGTAGTTTTCTTCTGTAGATTAGAATCAATGTAATTTAGCTTTTGAAATGGTTACCGTTTCTTAAGGCGCCTGTCCCATCTTGTTCAGCCGTTTGTCACCAAAATACTAAAGGACGGTTATATATATGTGGGAGACAGTCTATTCCAATATTTGATTTTCTCAATAAATGAATTCAACCATTGATTCGGTTTACTTTTGAGATAA

Coding sequence (CDS)

ATGGAGATCCCAAAACCCTACCCGCAATCGAATCCTCTGCTATCCGTTTCTTCTTTCATCCACCATCACTGCACCAGACTTGGAGCCGAGCTTTCCAATCGTCTTGAAGACACCAAACGCTTTGCCGGAACTTTCGCCAGAAGATGGCCGGCGGAGGCTAATTGGCGATCATTTCCTACACCACTTTTCGCGTCCCTTGCGCAGCACAGTCATGCCTTGGCTGCCACTCTTAGCTCCGACCAAGTGGCTAAGTCCCTCGTCGGCACGGCCGTCTACACTGTTAGCAATTCAAATAACGAATTTGTGCTCATTTCTGATCCCAATGGTGTCAAGTCTATTGGGTTGCTGTGTTTCCGCAAAGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCGAAGGTTGTCCCAATTACCCTTGATCAGCTTAAAGCTTCGGATACCAGAAGCAGTTTCGATGGGGTCCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACTAAGGAAGATATAGAAAAGGAACTGTTGAAGGTCTCAAAGGCATCAAGAGGATTAGGAACTTCTCAACATATTATGGTTGGTAGTTTGGAAGATGTTCTTAAGAAAATGGAGTTGAATGAAAAGAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCTCAACACATTCAAGAAGTGGGCAAAGCATGA

Protein sequence

MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPTPLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRELRSNAKVVPITLDQLKASDTRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA

Homology

[Close]

BLAST of Lsi04G015680 vs. ExPASy Swiss-Prot
Match: Q9SZB2 (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-78
Identity = 161/269 (59.85%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT-PLFASLAQ- 70
           NP LS SSFIHH CTR  ++LS R+EDTKRFA T A R        S PT P FAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  HSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
            S     TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQ-------------------------LKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQ                         LK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K ++ASRG    Q IMVGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLEDVLRKME 247

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 253
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of Lsi04G015680 vs. ExPASy Swiss-Prot
Match: Q9ZST9 (Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.5e-77
Identity = 161/267 (60.30%), Postives = 187/267 (70.04%), Query Frame = 0


Query: 9   QSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPTPLFASLAQ 68
           Q NPLLS S FI+HH       L+ RLE+TKR AGT                 L  S  +
Sbjct: 6   QWNPLLSFSRFINHHSN----HLATRLEETKRLAGT-----------------LIQSHTR 65

Query: 69  HSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 128
              A AATL+ + VAKSL GT+VYTVSNS+NEFVL+SD  G KSIGLLCFR+EDAE FLA
Sbjct: 66  TKPAFAATLTPNHVAKSLAGTSVYTVSNSDNEFVLMSDAEGAKSIGLLCFRQEDAEAFLA 125

Query: 129 QVRSRKRELRSNAKVVPITLDQ-------------------------LKASDTRSSFDGV 188
           QVRSRK+E R  AKVVPITLDQ                         L+A++ R SFDGV
Sbjct: 126 QVRSRKKEFRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAAN-RGSFDGV 185

Query: 189 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKME 248
           PVFQSDLL+VKKKNKRYCP+YF+KED+E EL KVS++S+G+G SQHIMVGS EDVLKKME
Sbjct: 186 PVFQSDLLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQHIMVGSFEDVLKKME 245

Query: 249 LNEKNSAWEDLIFIPPGKSHSQHIQEV 251
           L+EK+S WEDL+FIPPGK HSQH+QEV
Sbjct: 246 LSEKSSGWEDLVFIPPGKKHSQHMQEV 250

[Close]

BLAST of Lsi04G015680 vs. ExPASy Swiss-Prot
Match: F4J469 (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 72/195 (36.92%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 77  LSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS+D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLD---QLKASDTR------------------------SSFDGVPVFQS 196
           +R   +KVV + L    QLK +                             F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTS---QHIMVGSLEDVLKKMELN 241
             LI++ +N  Y P++F KED+EK L++ S     L  +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

[Close]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL
Match: A0A6J1J433 (protein TIC 22, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481156 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 9.2e-131
Identity = 237/253 (93.68%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYP+SNP+L  SSF+HHHCTRLGAELSNRLE+ KRFAGTFARRWPAEANWRSFPT
Sbjct: 1   MENPKPYPRSNPMLFASSFVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQLKASDTRSSFDGVPVFQSDLLIVKKKNKRY 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQLKASD++SSFDGVPVFQSDLLIVKKKNKRY
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQLKASDSKSSFDGVPVFQSDLLIVKKKNKRY 180

Query: 181 CPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240
           CPIYFTKEDIEKEL KVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG
Sbjct: 181 CPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240

Query: 241 KSHSQHIQEVGKA 254
           KSHSQHIQEVGKA
Sbjct: 241 KSHSQHIQEVGKA 253

[Close]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL
Match: A0A6J1FFN8 (protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.5e-128
Identity = 239/278 (85.97%), Postives = 248/278 (89.21%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYPQSN LLSVSSFIHHHCTR GAELSNRLE+TKRFAGTFA+RWPAEANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQ+AKSL+GTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQ                         LKASD
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           T+SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHI+EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL
Match: A0A5D3D9N1 (Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003450 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 238/278 (85.61%), Postives = 245/278 (88.13%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           MEIPKPY  SNPL+SVSSFIHHHCT+LGAELSNRLEDTKRFAGT ARRWPAEANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+H+HALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQ                         LKA +
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKVSKASR LGTSQHIMVGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL
Match: A0A1S3BV89 (protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 238/278 (85.61%), Postives = 245/278 (88.13%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           MEIPKPY  SNPL+SVSSFIHHHCT+LGAELSNRLEDTKRFAGT ARRWPAEANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+H+HALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQ                         LKA +
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKVSKASR LGTSQHIMVGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL
Match: A0A6J1J4F6 (protein TIC 22, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481156 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126
Identity = 237/278 (85.25%), Postives = 246/278 (88.49%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYP+SNP+L  SSF+HHHCTRLGAELSNRLE+ KRFAGTFARRWPAEANWRSFPT
Sbjct: 1   MENPKPYPRSNPMLFASSFVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQ                         LKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           ++SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKEL KVSKASRGLGTSQHIMVGSL
Sbjct: 181 SKSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. NCBI nr
Match: XP_038899812.1 (protein TIC 22, chloroplastic [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.2e-131
Identity = 248/278 (89.21%), Postives = 249/278 (89.57%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           MEIPKPYP SNPLLSVSSFI HHCTRLGAELSNRLEDTKRFAGT ARRWPAEANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLLSVSSFIRHHCTRLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH+HALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQ                         LKASD
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPIQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. NCBI nr
Match: XP_023525964.1 (protein TIC 22, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 1.4e-130
Identity = 238/253 (94.07%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYP+SNP+L VSS +HHHCTRLGAELSNRLE+ KRFAGTFARRWPAEANWRSFPT
Sbjct: 1   METPKPYPRSNPMLFVSSSVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQLKASDTRSSFDGVPVFQSDLLIVKKKNKRY 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQLKASD+RSSFDGVPVFQSDLLIVKKKNKRY
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQLKASDSRSSFDGVPVFQSDLLIVKKKNKRY 180

Query: 181 CPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240
           CPIYFTKEDIEKEL KVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG
Sbjct: 181 CPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240

Query: 241 KSHSQHIQEVGKA 254
           KSHSQHIQEVGKA
Sbjct: 241 KSHSQHIQEVGKA 253

[Close]

BLAST of Lsi04G015680 vs. NCBI nr
Match: XP_022982279.1 (protein TIC 22, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 237/253 (93.68%), Postives = 246/253 (97.23%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYP+SNP+L  SSF+HHHCTRLGAELSNRLE+ KRFAGTFARRWPAEANWRSFPT
Sbjct: 1   MENPKPYPRSNPMLFASSFVHHHCTRLGAELSNRLEEAKRFAGTFARRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFR 
Sbjct: 61  PPFASLAQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRM 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQLKASDTRSSFDGVPVFQSDLLIVKKKNKRY 180
           EDAETFLAQVRSRKRELRSNAKVVP+TLDQLKASD++SSFDGVPVFQSDLLIVKKKNKRY
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPLTLDQLKASDSKSSFDGVPVFQSDLLIVKKKNKRY 180

Query: 181 CPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240
           CPIYFTKEDIEKEL KVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG
Sbjct: 181 CPIYFTKEDIEKELSKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240

Query: 241 KSHSQHIQEVGKA 254
           KSHSQHIQEVGKA
Sbjct: 241 KSHSQHIQEVGKA 253

[Close]

BLAST of Lsi04G015680 vs. NCBI nr
Match: XP_031740688.1 (protein TIC 22, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 6.7e-128
Identity = 235/253 (92.89%), Postives = 241/253 (95.26%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           MEIPKPYP SNPL+SVSSFIHHHCT+LGAELSNRLEDTKRFAGT ARRWPA+ANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLA+H+HALAATLS DQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQLKASDTRSSFDGVPVFQSDLLIVKKKNKRY 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQLKAS+T SSFDGVPVFQSDLLIVKKKNKRY
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQLKASETGSSFDGVPVFQSDLLIVKKKNKRY 180

Query: 181 CPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKMELNEKNSAWEDLIFIPPG 240
           CPIYFTKEDIEKELLKV KA R  GTSQHIMVGSLEDVLKKMELNE NSAWEDLIFIPPG
Sbjct: 181 CPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSLEDVLKKMELNENNSAWEDLIFIPPG 240

Query: 241 KSHSQHIQEVGKA 254
           KSHSQH QEVGKA
Sbjct: 241 KSHSQHFQEVGKA 252

[Close]

BLAST of Lsi04G015680 vs. NCBI nr
Match: XP_022937273.1 (protein TIC 22, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 239/278 (85.97%), Postives = 248/278 (89.21%), Query Frame = 0


Query: 1   MEIPKPYPQSNPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT 60
           ME PKPYPQSN LLSVSSFIHHHCTR GAELSNRLE+TKRFAGTFA+RWPAEANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PLFASLAQHSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120
           P FASLAQH++ALAATLSSDQ+AKSL+GTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQ-------------------------LKASD 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQ                         LKASD
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240
           T+SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 254
           EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHI+EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of Lsi04G015680 vs. TAIR 10
Match: AT4G33350.1 (Tic22-like family protein )

HSP 1 Score: 294.3 bits (752), Expect = 9.5e-80
Identity = 161/269 (59.85%), Postives = 196/269 (72.86%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT-PLFASLAQ- 70
           NP LS SSFIHH CTR  ++LS R+EDTKRFA T A R        S PT P FAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  HSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
            S     TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQ-------------------------LKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQ                         LK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K ++ASRG    Q IMVGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLEDVLRKME 247

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 253
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of Lsi04G015680 vs. TAIR 10
Match: AT4G33350.2 (Tic22-like family protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.5e-66
Identity = 144/269 (53.53%), Postives = 174/269 (64.68%), Query Frame = 0


Query: 11  NPLLSVSSFIHHHCTRLGAELSNRLEDTKRFAGTFARRWPAEANWRSFPT-PLFASLAQ- 70
           NP LS SSFIHH CTR  ++LS R+EDTKRFA T A R        S PT P FAS++Q 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  HSHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLA 130
            S     TLS   VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQ-------------------------LKASDTRSSFDGV 190
           Q R R+REL++NAKVVPITLDQ                         LK+S  ++ FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSLEDVLKKME 250
           PVFQS+LL+V+KKN+RYCP                             VGSLEDVL+KME
Sbjct: 188 PVFQSELLVVRKKNRRYCP-----------------------------VGSLEDVLRKME 241

Query: 251 LNEKNSAWEDLIFIPPGKSHSQHIQEVGK 253
           ++EKNS WED+IFIPPG+S++QH+Q++ K
Sbjct: 248 MSEKNSGWEDVIFIPPGRSYAQHMQDLIK 241

[Close]

BLAST of Lsi04G015680 vs. TAIR 10
Match: AT3G23710.1 (Tic22-like family protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 72/195 (36.92%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 77  LSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS+D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLD---QLKASDTR------------------------SSFDGVPVFQS 196
           +R   +KVV + L    QLK +                             F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTS---QHIMVGSLEDVLKKMELN 241
             LI++ +N  Y P++F KED+EK L++ S     L  +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

The following BLAST results are available for this feature:

BLAST of Lsi04G015680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZB2	1.3e-78	59.85	Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1	[more]
Q9ZST9	1.5e-77	60.30	Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1	[more]
F4J469	1.9e-24	36.92	Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=...	[more]

BLAST of Lsi04G015680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J433	9.2e-131	93.68	protein TIC 22, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FFN8	9.5e-128	85.97	protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609...	[more]
A0A5D3D9N1	1.0e-126	85.61	Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00345...	[more]
A0A1S3BV89	1.0e-126	85.61	protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1	[more]
A0A6J1J4F6	1.4e-126	85.25	protein TIC 22, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of Lsi04G015680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899812.1	2.2e-131	89.21	protein TIC 22, chloroplastic [Benincasa hispida]	[more]
XP_023525964.1	1.4e-130	94.07	protein TIC 22, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022982279.1	1.9e-130	93.68	protein TIC 22, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_031740688.1	6.7e-128	92.89	protein TIC 22, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_022937273.1	2.0e-127	85.97	protein TIC 22, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Lsi04G015680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33350.1	9.5e-80	59.85	Tic22-like family protein	[more]
AT4G33350.2	3.5e-66	53.53	Tic22-like family protein	[more]
AT3G23710.1	1.3e-25	36.92	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 13..150 e-value: 4.8E-42 score: 143.9 coord: 150..249 e-value: 1.5E-43 score: 148.9
IPR007378	Tic22-like	PANTHER	PTHR33926	PROTEIN TIC 22, CHLOROPLASTIC	coord: 151..250 coord: 8..150
None	No IPR available	GENE3D	3.40.1350.100		coord: 80..161 e-value: 3.3E-8 score: 35.7
None	No IPR available	PANTHER	PTHR33926:SF4	PROTEIN TIC 22, CHLOROPLASTIC	coord: 151..250
None	No IPR available	PANTHER	PTHR33926:SF4	PROTEIN TIC 22, CHLOROPLASTIC	coord: 8..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G015680.1	Lsi04G015680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009507	chloroplast