Lsi04G015300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G015300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr04: 22906391 .. 22909472 (+)
RNA-Seq Expression	Lsi04G015300
Synteny	Lsi04G015300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGGGGATGCTTATCAGAAGTTGCTAGAACCATCTGGCGATGCTGTAATTTGGGAGCATATTTCAATTATAAAATCGATAATCAAATAGGACGCCAAAAGCCAAAACAAACTGTGCCCTCGATTTCTCATGTATAAAAGCAACACCTCAAGGTAAATAAATTTCCCGATGATACCATGGACTGTTCGAACTCGGACATCATGGAGGCTGAATTTTCGTCAATCAAAGCCGGGGAAGGCGATTCTGTCCACCACTTACTTGCATTGGCTCGTCAATTCATCAATCAACGAAAGCCTTCCCAAGCCCTCCAAGCGGTATGTCTAGCATAAACTTACCTCTCTTGGATTTTTTGGTCTATTCTTGTTCTTTCAAAACCTTTCTGCAATGGATTATTTGTATTTTTAGCTTCTGGGTTTTCTTTGAACTGTTAATTGTCGAGTTTCTGTAAATTAAAGTACTTCAATTGAGTTCCGGTCGCCAATAGGGCTTTTCCTCCTCGCTTGGCACATTGGGAAAAGGCTTCAGAGGATAATTGTCATCTGTACATTTCTAGTAATTGGGTTTTGATATTAAAGAGTCCTCTTTTCGACATCCCAATTTCCTTTGAAGCTAGACAAGGAAAATGCCATAACATCCTGGAGCTTTCTTATTCTCAGTGTTTAGGACGGCTTTCTTGATTTCCATCTCTGAAAATACAATCCTAAAGTTAGAGTAATACATCTTTTTAATTTCAATGGTAATAATAATAACACACACGAATATCTGAAGCTCAAGAGCAGGCAATTTGTAAAACCCCCACTCACCTCACCCACCAACGCACACAAAAAGGAAAAAGAGGGAGAAGAATGGGAATGGAGAACGGAAGTGCCTGAAAGAAGAGAGAATGTATTCAAATGCTTCATCTAGTGGTCGTACTTAGAAAGTTAGAGTAAATAAATTGAAAAGAAAAACAGTTTCCAATTATGAATAGTGTAGTGGCCAATAACTTCGCTGTTAATTCGTACAGCGCTGACCAGAATAATAGAGCTACGGACCCCAGTTATGAAGGGTAGGTTTTTTTTGGGAATCAAAGTAGTATTAGCCTCAATAGGGATTCGGTTTTGATGTTACTCTTTAGAGAACTCTTATAAGACCTCTCAAAGAGTCCCCTTTCTTACGTCCTTATTTTCTTTCAAGCAAGTCTATAAGAAGTAAGAATCCATCACTTTCCGTAGCCTTTTTATGCTCAATGTTAAGGATAGCTTGCTTGGTCTCCATCCCTGAAATTGGCCTTCTTTGAGTACCTGACGATCCTGGCTGCTTAAATTAGTAGGCAACCTGCAATTCTTGACCCGAAATGGTCAATGACCTTGAAGGGGGTTGCTGTGAAAGACCGTTTATTTCTATTATCTACAGAATCCTCTGGTCTACTACCATCATCTGTTTCCAGTTTACAGACAGCTACTAAGTCCTGCAGCTGCCAATCTTAAGAGAATTTGAAATGCCGCCAGTTCTCTCTCTTAGTTGTTTTTGTCATTGATATTTAGGTGTTTGGGATTATCCCCTGTATTTAGGGCAATCTGTTTGGGGAGTGTGTGCTATTATGTGGAGACTTTGGGGTGCTATTCATCCCAAAAAAAAAAAAAAGATCAGTCGTTAAGTTTCAATCGGCATTCTGAACGATTGCAACATAAATCTGTCACCAGGAGCAGATTGTGTTGATCTATTTATTTGACCTTTGATTCATGACATACTGAATTCTTCTCAGAACTAGAAACCTACACTAGGGTGTCTCAACTATACTAGGGTTATATTTGTCAATGTTGTTTTAAGACTAACAGACAAAGAATATTTGTATTTATAAAATTTGAAATGTTTTAGAATTTTCTGTTGATTGACTTAAATATGCTTTGTACCTCTATTTATCAATTTTGTATTACTTTTTTTTTTCTTTTCTTTTTTAGTTCCAATTGTATTGTATACTACTTATTATATACCATAATCTTTTCTACCCATGCTAATTGAGCCAGATATTGACAAACTTGTAATGTTTGTAGCTTTTAGAGGAAAGGAAAGGAAACTACACATGTGCGTAGTTGTAGTAGTCAGCTCAGATGCCTCAATCAACATGGTTAAATCATGGATGGGGCGTATGAGCTAATCTCTTAGAACAGAATAAGAACAATAAATTTTGTTAATAGCTTTCGGCACCTTGTTTGTCATGTTCTAACAGGTTGTAATGGCAATGAGAACCCAAGGTGGGGATGCAGCAGTCTTTCAATCTTTGCACCGTGCCCGTGAGCTGTACAGAACTCGATTACAGGAGACTGCTGATGTTGATCAACTAGCTTCTTTATTTGCAGAGTGTGCTATAGCTGAAGCCCAGCCTCTGAACCCTGAACCTACTGAAATTAACAGTAACATATCTAGCTCATCAGTTGTCGATGCTCACGGTAATTCAATACTGGCAGAAACTGGTAGGATGCAAGTTGTTATGGATGCATTCTCAGATGGGAGCAGTTTTATTTGTTTGCAATGTGGGGGTCTTGTTAGTAACCATCGCAAAGATGAGCATTATGCATATTGGTGTGCCCAGATCTAACTTGTATTCGTGTATCAATCCTCATTCTTGTCTTACCTGGCGAAAAAAATCCTCCAGAACTTGTATTTGTGTCTTTCGATTTGTACATGGCATAGCTGCTTTTATGTTGGCGCGCCTCAGTTGATGATGCTAGCAAGCTAAGGTTTTAAACGGGTGTCGCCAATTGTTGTAAGTGGGTTCTCCCTTGAGTAGCTTGCAACATCTTCCTCTGTACAAGAGAGATATAAGAAAAGTATAAACATGATCAATTTGGTTTGCCAAGATCATTATGATACATAACTTTTCATTTTAGAAGAAAGTGACCAGCCCCATATCTGGGCAGAAAATTACTGTGTGGAGGTAACACCTATTTTTCCTTTCCAATCGTATTGCAAGGCCTACCTAGTTTTGCAGATAACATCGACTGGTGATCAATACTTGCTATATTTTAAATATTTAATTCTCATGTGGATACTTTTGGGTTTATATTCAATATAGTAAGTCACAGAAGTATTGCTAGC

mRNA sequence

GGGTGGGGATGCTTATCAGAAGTTGCTAGAACCATCTGGCGATGCTGTAATTTGGGAGCATATTTCAATTATAAAATCGATAATCAAATAGGACGCCAAAAGCCAAAACAAACTGTGCCCTCGATTTCTCATGTATAAAAGCAACACCTCAAGGTAAATAAATTTCCCGATGATACCATGGACTGTTCGAACTCGGACATCATGGAGGCTGAATTTTCGTCAATCAAAGCCGGGGAAGGCGATTCTGTCCACCACTTACTTGCATTGGCTCGTCAATTCATCAATCAACGAAAGCCTTCCCAAGCCCTCCAAGCGGTTGTAATGGCAATGAGAACCCAAGGTGGGGATGCAGCAGTCTTTCAATCTTTGCACCGTGCCCGTGAGCTGTACAGAACTCGATTACAGGAGACTGCTGATGTTGATCAACTAGCTTCTTTATTTGCAGAGTGTGCTATAGCTGAAGCCCAGCCTCTGAACCCTGAACCTACTGAAATTAACAGTAACATATCTAGCTCATCAGTTGTCGATGCTCACGGTAATTCAATACTGGCAGAAACTGGTAGGATGCAAGTTGTTATGGATGCATTCTCAGATGGGAGCAGTTTTATTTGTTTGCAATGTGGGGGTCTTGTTAGTAACCATCGCAAAGATGAGCATTATGCATATTGGTGTGCCCAGATCTAACTTGTATTCGTGTATCAATCCTCATTCTTGTCTTACCTGGCGAAAAAAATCCTCCAGAACTTGTATTTGTGTCTTTCGATTTGTACATGGCATAGCTGCTTTTATGTTGGCGCGCCTCAGTTGATGATGCTAGCAAGCTAAGGTTTTAAACGGGTGTCGCCAATTGTTGTAAGTGGGTTCTCCCTTGAGTAGCTTGCAACATCTTCCTCTGTACAAGAGAGATATAAGAAAAGTATAAACATGATCAATTTGGTTTGCCAAGATCATTATGATACATAACTTTTCATTTTAGAAGAAAGTGACCAGCCCCATATCTGGGCAGAAAATTACTGTGTGGAGGTAACACCTATTTTTCCTTTCCAATCGTATTGCAAGGCCTACCTAGTTTTGCAGATAACATCGACTGGTGATCAATACTTGCTATATTTTAAATATTTAATTCTCATGTGGATACTTTTGGGTTTATATTCAATATAGTAAGTCACAGAAGTATTGCTAGC

Coding sequence (CDS)

ATGGACTGTTCGAACTCGGACATCATGGAGGCTGAATTTTCGTCAATCAAAGCCGGGGAAGGCGATTCTGTCCACCACTTACTTGCATTGGCTCGTCAATTCATCAATCAACGAAAGCCTTCCCAAGCCCTCCAAGCGGTTGTAATGGCAATGAGAACCCAAGGTGGGGATGCAGCAGTCTTTCAATCTTTGCACCGTGCCCGTGAGCTGTACAGAACTCGATTACAGGAGACTGCTGATGTTGATCAACTAGCTTCTTTATTTGCAGAGTGTGCTATAGCTGAAGCCCAGCCTCTGAACCCTGAACCTACTGAAATTAACAGTAACATATCTAGCTCATCAGTTGTCGATGCTCACGGTAATTCAATACTGGCAGAAACTGGTAGGATGCAAGTTGTTATGGATGCATTCTCAGATGGGAGCAGTTTTATTTGTTTGCAATGTGGGGGTCTTGTTAGTAACCATCGCAAAGATGAGCATTATGCATATTGGTGTGCCCAGATCTAA

Protein sequence

MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI

Homology

[Close]

BLAST of Lsi04G015300 vs. ExPASy TrEMBL
Match: A0A0A0KZU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641540 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNSD+MEAEF SI AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSNSDMMEAEFPSITAGERDSVRHLLTLARQFINQRKPSQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPLNPEPTEINSNISSSSVVDAH 120
           FQSLHRARELYR+RLQETADVDQLASLFAECAIAEA QPLNPEPTE N+N+SSSSVVD H
Sbjct: 61  FQSLHRARELYRSRLQETADVDQLASLFAECAIAEAQQPLNPEPTESNNNMSSSSVVDGH 120

Query: 121 GNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
            NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
Sbjct: 121 ANSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169

[Close]

BLAST of Lsi04G015300 vs. ExPASy TrEMBL
Match: A0A5D3D9E7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003130 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAV
Sbjct: 1   MDCSNSDMMEAEFPSIRAGEGDSVRHLLTLARQFINQRKPSQALQAVVMAMKTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPLNPEPTEINSNISSSSVVDAH 120
           FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPLN EPTEIN+N+SSSSVV+ H
Sbjct: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQQPLNLEPTEINNNMSSSSVVEGH 120

Query: 121 GNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
            NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Sbjct: 121 ANSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAHI 169

[Close]

BLAST of Lsi04G015300 vs. ExPASy TrEMBL
Match: A0A1S3BU73 (uncharacterized protein LOC103493565 OS=Cucumis melo OX=3656 GN=LOC103493565 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.1e-79
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAV
Sbjct: 1   MDCSNSDMMEAEFPSIRAGEGDSVRHLLTLARQFINQRKPSQALQAVVMAMKTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPLNPEPTEINSNISSSSVVDAH 120
           FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPLN EPTEIN+N+SSSSVV+ H
Sbjct: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQQPLNLEPTEINNNMSSSSVVEGH 120

Query: 121 GNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
            NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Sbjct: 121 ANSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAHI 169

[Close]

BLAST of Lsi04G015300 vs. ExPASy TrEMBL
Match: A0A6J1FAR2 (uncharacterized protein LOC111443615 OS=Cucurbita moschata OX=3662 GN=LOC111443615 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSKSDMMETEFASNRAGEGDSVRDLLTLARQFIDQRNPTQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHG 120
           FQSLHRARE+YRTR QETADVDQLASLFAECAIAEAQPLNPEPT+ N++IS S VVDAHG
Sbjct: 61  FQSLHRAREMYRTRFQETADVDQLASLFAECAIAEAQPLNPEPTDSNNDISGSLVVDAHG 120

Query: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
           NSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Sbjct: 121 NSILAETGRMQIVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCARI 168

[Close]

BLAST of Lsi04G015300 vs. ExPASy TrEMBL
Match: A0A6J1ILE4 (uncharacterized protein LOC111477288 OS=Cucurbita maxima OX=3661 GN=LOC111477288 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.5e-76
Identity = 146/168 (86.90%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSKSDMMETEFASNRAGEGDSVRDLLTLARQFIDQRNPTQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHG 120
            QSLHRARELYRTR QETADVDQLASLFAECAIAEAQPLNPEPT+ N++IS S VVDAHG
Sbjct: 61  IQSLHRARELYRTRFQETADVDQLASLFAECAIAEAQPLNPEPTDSNNDISGSLVVDAHG 120

Query: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
           NSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Sbjct: 121 NSILAETGRMQIVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCARI 168

[Close]

BLAST of Lsi04G015300 vs. NCBI nr
Match: XP_038896970.1 (uncharacterized protein LOC120085161 [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 5.9e-80
Identity = 156/168 (92.86%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNS++MEAEF S +AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSNSNMMEAEFPSTRAGEADSVRHLLTLARQFINQRKPSQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHG 120
           FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTE N+NISSSSVVD HG
Sbjct: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTESNNNISSSSVVDGHG 120

Query: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
           NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSN RKDEHYAYWCAQI
Sbjct: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNLRKDEHYAYWCAQI 168

[Close]

BLAST of Lsi04G015300 vs. NCBI nr
Match: XP_004141268.2 (uncharacterized protein LOC101216881 isoform X1 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 6.5e-79
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNSD+MEAEF SI AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSNSDMMEAEFPSITAGERDSVRHLLTLARQFINQRKPSQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPLNPEPTEINSNISSSSVVDAH 120
           FQSLHRARELYR+RLQETADVDQLASLFAECAIAEA QPLNPEPTE N+N+SSSSVVD H
Sbjct: 61  FQSLHRARELYRSRLQETADVDQLASLFAECAIAEAQQPLNPEPTESNNNMSSSSVVDGH 120

Query: 121 GNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
            NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
Sbjct: 121 ANSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169

[Close]

BLAST of Lsi04G015300 vs. NCBI nr
Match: XP_008452582.1 (PREDICTED: uncharacterized protein LOC103493565 [Cucumis melo] >KAA0064406.1 uncharacterized protein E6C27_scaffold255G001140 [Cucumis melo var. makuwa] >TYK20181.1 uncharacterized protein E5676_scaffold134G003130 [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 8.5e-79
Identity = 155/169 (91.72%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAV
Sbjct: 1   MDCSNSDMMEAEFPSIRAGEGDSVRHLLTLARQFINQRKPSQALQAVVMAMKTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPLNPEPTEINSNISSSSVVDAH 120
           FQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPLN EPTEIN+N+SSSSVV+ H
Sbjct: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQQPLNLEPTEINNNMSSSSVVEGH 120

Query: 121 GNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
            NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Sbjct: 121 ANSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAHI 169

[Close]

BLAST of Lsi04G015300 vs. NCBI nr
Match: KAG6591394.1 (hypothetical protein SDJN03_13740, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.0 bits (754), Expect = 4.0e-76
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAV
Sbjct: 374 MDCSKSDMMETEFASNRAGEGDSVRDLLTLARQFIDQRNPTQALQAVVMAMRTQGGDAAV 433

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHG 120
           FQSLHRARELYRTR QETADVDQLASLFAECAIAEAQPLNPEPT+ N++IS S VVDAHG
Sbjct: 434 FQSLHRARELYRTRFQETADVDQLASLFAECAIAEAQPLNPEPTDSNNDISGSLVVDAHG 493

Query: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
           NSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Sbjct: 494 NSILAETGRMQIVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCARI 541

[Close]

BLAST of Lsi04G015300 vs. NCBI nr
Match: XP_022937284.1 (uncharacterized protein LOC111443615 [Cucurbita moschata])

HSP 1 Score: 294.3 bits (752), Expect = 6.8e-76
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAV 60
           MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAV
Sbjct: 1   MDCSKSDMMETEFASNRAGEGDSVRDLLTLARQFIDQRNPTQALQAVVMAMRTQGGDAAV 60

Query: 61  FQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNISSSSVVDAHG 120
           FQSLHRARE+YRTR QETADVDQLASLFAECAIAEAQPLNPEPT+ N++IS S VVDAHG
Sbjct: 61  FQSLHRAREMYRTRFQETADVDQLASLFAECAIAEAQPLNPEPTDSNNDISGSLVVDAHG 120

Query: 121 NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI 169
           NSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Sbjct: 121 NSILAETGRMQIVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCARI 168

[Close]

BLAST of Lsi04G015300 vs. TAIR 10
Match: AT5G47830.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-46
Identity = 93/144 (64.58%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 28  LALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASL 87
           L+ AR+ ++Q +PSQALQAVVMAMR QGGD AV Q L+R RELY+ R+QETA +DQLAS+
Sbjct: 30  LSAARRLVDQGEPSQALQAVVMAMRNQGGDEAVLQILNRTRELYKRRIQETASMDQLASI 89

Query: 88  FAECAIAEAQPLN-PEPTEINSNISSSSVV--DAHGNSILAETGRMQVVMDAFSDGSSFI 147
           FAECAI EAQPL   EPT       +   V  DAHG SIL ++GR Q+++DAF+DGSSFI
Sbjct: 90  FAECAITEAQPLALDEPTTSKDLFGTKQTVTADAHGISILEKSGRSQIMLDAFADGSSFI 149

Query: 148 CLQCGGLVSNHRKDEHYAYWCAQI 169
           CLQCGGLVS HR+DEHYAYWC+ +
Sbjct: 150 CLQCGGLVSIHRRDEHYAYWCSNM 173

[Close]

BLAST of Lsi04G015300 vs. TAIR 10
Match: AT5G47830.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 80/123 (65.04%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 49  MAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN-PEPTEIN 108
           MAMR QGGD AV Q L+R RELY+ R+QETA +DQLAS+FAECAI EAQPL   EPT   
Sbjct: 1   MAMRNQGGDEAVLQILNRTRELYKRRIQETASMDQLASIFAECAITEAQPLALDEPTTSK 60

Query: 109 SNISSSSVV--DAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWC 168
               +   V  DAHG SIL ++GR Q+++DAF+DGSSFICLQCGGLVS HR+DEHYAYWC
Sbjct: 61  DLFGTKQTVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCGGLVSIHRRDEHYAYWC 120

The following BLAST results are available for this feature:

BLAST of Lsi04G015300 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G015300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZU1	3.2e-79	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641540 PE=4 SV=1	[more]
A0A5D3D9E7	4.1e-79	91.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BU73	4.1e-79	91.72	uncharacterized protein LOC103493565 OS=Cucumis melo OX=3656 GN=LOC103493565 PE=...	[more]
A0A6J1FAR2	3.3e-76	86.90	uncharacterized protein LOC111443615 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]
A0A6J1ILE4	9.5e-76	86.90	uncharacterized protein LOC111477288 OS=Cucurbita maxima OX=3661 GN=LOC111477288...	[more]

BLAST of Lsi04G015300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896970.1	5.9e-80	92.86	uncharacterized protein LOC120085161 [Benincasa hispida]	[more]
XP_004141268.2	6.5e-79	92.31	uncharacterized protein LOC101216881 isoform X1 [Cucumis sativus]	[more]
XP_008452582.1	8.5e-79	91.72	PREDICTED: uncharacterized protein LOC103493565 [Cucumis melo] >KAA0064406.1 unc...	[more]
KAG6591394.1	4.0e-76	87.50	hypothetical protein SDJN03_13740, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937284.1	6.8e-76	86.90	uncharacterized protein LOC111443615 [Cucurbita moschata]	[more]

BLAST of Lsi04G015300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47830.1	3.5e-46	64.58	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G47830.2	4.1e-39	65.04	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35513	OS02G0158600 PROTEIN	coord: 15..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G015300.1	Lsi04G015300.1	mRNA