Lsi04G015120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G015120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMFP1 attachment factor 1
Locationchr04: 22751880 .. 22752359 (+)
RNA-Seq ExpressionLsi04G015120
SyntenyLsi04G015120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

mRNA sequence

ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

Coding sequence (CDS)

ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

Protein sequence

MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES
Homology
BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.5e-31
Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 0

Query: 22  DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEE 81
           DS    +        K   TSFSIWPP+QRTRDAVI RLIE+LS PS+LSKRYGT+PQ+E
Sbjct: 5   DSAQSQETVTQETQNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDE 64

Query: 82  AADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSS 141
           A++ ARLIEEEA++ A   AS  DDGIEILQ+YS+EISKR ++TVK+R+A  + +E  S 
Sbjct: 65  ASETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESK 124

Query: 142 PPVLSTTTNE 152
           P  L    +E
Sbjct: 125 PSELPADASE 134

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 0

Query: 15  DSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRY 74
           D TS    S+  D  KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKRY
Sbjct: 30  DPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRY 89

Query: 75  GTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDS 134
           GT+  ++A   A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR LE+VKAR  S++
Sbjct: 90  GTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SNA 149

Query: 135 TAENGS 141
           +  NGS
Sbjct: 150 SVGNGS 153

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.1e-25
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0

Query: 9   VPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPS 68
           +  TE+ +T P T         E+ K+P     S  IWPP+Q+TRDAVI RLIETLS  S
Sbjct: 17  ISETENSTTLPTT---------ETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTES 76

Query: 69  VLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKA 128
           +LSKR+G++  EEA+  A+ IE+EAY+ A+     DDDGIEIL+ YS+EISKR LE+VKA
Sbjct: 77  ILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKA 135

Query: 129 RAASDSTAENGSSPP 144
           ++       N +SPP
Sbjct: 137 KS-------NVASPP 135

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0

Query: 8   AVPPTEHDSTSPPT---DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETL 67
           + P  + +S S  T        D   E TK  KS    FS+WPP Q++RD V+  +I+TL
Sbjct: 13  STPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTL 72

Query: 68  SNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLE 127
           S  S+LS +YGT+  EEA+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +E
Sbjct: 73  STDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIE 132

Query: 128 TVKARAASDSTAE 138
           + + R  ++ + E
Sbjct: 133 SAEVRFKANGSME 143

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 42  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFA--AG 101
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++ +++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 102 KASADDDGIEILQLYSREISKRTLETVKAR-----AASDSTAENGSSP 143
           +   D DG   +QLY++E SK  LE +K       AA +  +E+  SP
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A0A0L505 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A5A7V8G3 (MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002960 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A1S3BVE8 (MFP1 attachment factor 1-like OS=Cucumis melo OX=3656 GN=LOC103493582 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A6J1IP46 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.0e-58
Identity = 134/160 (83.75%), Postives = 141/160 (88.12%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP +EA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTN-EETPSVEES 160
           RTL+TVKARAASDSTAENGSS PV+STTT+ EETPSV+ES
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A6J1FAY3 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 132/158 (83.54%), Postives = 137/158 (86.71%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSE +IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSETEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEE 159
           RTL+TVKARAASDSTAENGSS PV+STT  EETPSV+E
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_004141279.1 (MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_012612 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.2e-71
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_008452611.1 (PREDICTED: MFP1 attachment factor 1-like [Cucumis melo] >KAA0064423.1 MFP1 attachment factor 1-like [Cucumis melo var. makuwa] >TYK20164.1 MFP1 attachment factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_038899942.1 (MFP1 attachment factor 1-like [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 145/159 (91.19%), Postives = 151/159 (94.97%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEPQIAA+P TE DSTSP TDSQ GD  KESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPQIAALPSTEQDSTSPTTDSQAGDLPKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQ+EA++AARLIEEEAYSFAAGKA+ADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQDEASEAARLIEEEAYSFAAGKATADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDST ENGSSPPV+STTTN ETPSVEES
Sbjct: 121 RTLETVKARAASDSTTENGSSPPVVSTTTNAETPSVEES 159

BLAST of Lsi04G015120 vs. NCBI nr
Match: KAG6591406.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-58
Identity = 133/158 (84.18%), Postives = 138/158 (87.34%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEE 159
           RTL+TVKARAASDSTAENGSS PV+STT  EETPSV+E
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_023535662.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58
Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 0

Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTN-EETPSVEES 160
           RTL+TVKARAASDSTAENGSS PV+STTT+ EETPSV+ES
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 0

Query: 15  DSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRY 74
           D TS    S+  D  KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKRY
Sbjct: 30  DPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRY 89

Query: 75  GTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDS 134
           GT+  ++A   A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR LE+VKAR  S++
Sbjct: 90  GTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SNA 149

Query: 135 TAENGS 141
           +  NGS
Sbjct: 150 SVGNGS 153

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 114.8 bits (286), Expect = 6.5e-26
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0

Query: 9   VPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPS 68
           +  TE+ +T P T         E+ K+P     S  IWPP+Q+TRDAVI RLIETLS  S
Sbjct: 17  ISETENSTTLPTT---------ETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTES 76

Query: 69  VLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKA 128
           +LSKR+G++  EEA+  A+ IE+EAY+ A+     DDDGIEIL+ YS+EISKR LE+VKA
Sbjct: 77  ILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKA 135

Query: 129 RAASDSTAENGSSPP 144
           ++       N +SPP
Sbjct: 137 KS-------NVASPP 135

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0

Query: 8   AVPPTEHDSTSPPT---DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETL 67
           + P  + +S S  T        D   E TK  KS    FS+WPP Q++RD V+  +I+TL
Sbjct: 13  STPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTL 72

Query: 68  SNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLE 127
           S  S+LS +YGT+  EEA+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +E
Sbjct: 73  STDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIE 132

Query: 128 TVKARAASDSTAE 138
           + + R  ++ + E
Sbjct: 133 SAEVRFKANGSME 143

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 42  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFA--AG 101
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++ +++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 102 KASADDDGIEILQLYSREISKRTLETVKAR-----AASDSTAENGSSP 143
           +   D DG   +QLY++E SK  LE +K       AA +  +E+  SP
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-08
Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 32  STKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEE 91
           S K+ ++   S  +WPPS+ TR  +++R+ + ++ PS+ S++YG +  EEA   A+ IE+
Sbjct: 4   SAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIED 63

Query: 92  EAYSFAAG--KASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSSPPVLSTTT 151
            A++ A    +   D DG   + +Y++E SK  L+ +K     +S  E      V    +
Sbjct: 64  LAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVEVSKDGDVFFDIS 123

Query: 152 NEETPSVEE 159
                 +EE
Sbjct: 124 GGSRAFIEE 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M7N68.5e-3156.92MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1[more]
Q9C5003.3e-2755.56WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=... [more]
Q9FMH69.1e-2549.63WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=... [more]
Q0WQ911.5e-1438.35WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=... [more]
Q9M6513.5e-0834.26RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0L5053.0e-7194.97MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1[more]
A0A5A7V8G38.7e-7193.71MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3BVE88.7e-7193.71MFP1 attachment factor 1-like OS=Cucumis melo OX=3656 GN=LOC103493582 PE=4 SV=1[more]
A0A6J1IP465.0e-5883.75MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 S... [more]
A0A6J1FAY31.1e-5783.54MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4... [more]
Match NameE-valueIdentityDescription
XP_004141279.16.2e-7194.97MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_... [more]
XP_008452611.11.8e-7093.71PREDICTED: MFP1 attachment factor 1-like [Cucumis melo] >KAA0064423.1 MFP1 attac... [more]
XP_038899942.11.1e-6791.19MFP1 attachment factor 1-like [Benincasa hispida][more]
KAG6591406.12.7e-5884.18MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023535662.14.6e-5884.38MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G47200.12.4e-2855.56WPP domain protein 2 [more]
AT5G43070.16.5e-2649.63WPP domain protein 1 [more]
AT5G27940.11.0e-1538.35WPP domain protein 3 [more]
AT5G19320.12.5e-0934.26RAN GTPase activating protein 2 [more]
AT3G63130.14.7e-0828.68RAN GTPase activating protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025265WPP domainPFAMPF13943WPPcoord: 42..134
e-value: 2.4E-38
score: 130.5
IPR038214WPP domain superfamilyGENE3D1.10.246.200WPP domaincoord: 42..137
e-value: 3.4E-39
score: 135.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..47
NoneNo IPR availablePANTHERPTHR34362:SF1WPP DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 1..149
IPR044692WPP domain-containing protein 1/2/3PANTHERPTHR34362WPP DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G015120.1Lsi04G015120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048527 lateral root development
biological_process GO:0000278 mitotic cell cycle
cellular_component GO:0005634 nucleus