Lsi04G015120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G015120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MFP1 attachment factor 1
Location	chr04: 22751880 .. 22752359 (+)
RNA-Seq Expression	Lsi04G015120
Synteny	Lsi04G015120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

mRNA sequence

ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

Coding sequence (CDS)

ATGTCTGAGCCTCAGATCGCCGCCGTGCCGCCCACCGAACATGATTCTACCTCCCCCCCGACGGATTCCCAAGGAGGAGATCAGGCTAAGGAATCAACCAAATCACCCAAGTCTTTTAACACCTCGTTCAGTATTTGGCCGCCTTCGCAACGCACTCGTGACGCTGTCATCAAACGCCTGATCGAGACGCTCTCGAACCCCTCTGTTCTCTCCAAGCGCTATGGTACTGTACCCCAAGAAGAGGCCGCCGACGCAGCTCGGCTTATAGAGGAAGAAGCCTATTCTTTCGCCGCAGGTAAAGCCAGTGCTGACGACGATGGGATCGAGATCCTTCAACTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACTGTCAAGGCCAGAGCAGCGTCCGATTCTACAGCTGAAAACGGTTCGTCTCCTCCTGTTTTATCGACCACCACCAACGAGGAAACCCCATCTGTTGAAGAATCCTAA

Protein sequence

MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES

Homology

[Close]

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.5e-31
Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 22  DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEE 81
           DS    +        K   TSFSIWPP+QRTRDAVI RLIE+LS PS+LSKRYGT+PQ+E
Sbjct: 5   DSAQSQETVTQETQNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDE 64

Query: 82  AADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSS 141
           A++ ARLIEEEA++ A   AS  DDGIEILQ+YS+EISKR ++TVK+R+A  + +E  S 
Sbjct: 65  ASETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESK 124

Query: 142 PPVLSTTTNE 152
           P  L    +E
Sbjct: 125 PSELPADASE 134

[Close]

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 15  DSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRY 74
           D TS    S+  D  KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKRY
Sbjct: 30  DPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRY 89

Query: 75  GTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDS 134
           GT+  ++A   A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR LE+VKAR  S++
Sbjct: 90  GTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SNA 149

Query: 135 TAENGS 141
           +  NGS
Sbjct: 150 SVGNGS 153

[Close]

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.1e-25
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 9   VPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPS 68
           +  TE+ +T P T         E+ K+P     S  IWPP+Q+TRDAVI RLIETLS  S
Sbjct: 17  ISETENSTTLPTT---------ETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTES 76

Query: 69  VLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKA 128
           +LSKR+G++  EEA+  A+ IE+EAY+ A+     DDDGIEIL+ YS+EISKR LE+VKA
Sbjct: 77  ILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKA 135

Query: 129 RAASDSTAENGSSPP 144
           ++       N +SPP
Sbjct: 137 KS-------NVASPP 135

[Close]

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 8   AVPPTEHDSTSPPT---DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETL 67
           + P  + +S S  T        D   E TK  KS    FS+WPP Q++RD V+  +I+TL
Sbjct: 13  STPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTL 72

Query: 68  SNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLE 127
           S  S+LS +YGT+  EEA+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +E
Sbjct: 73  STDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIE 132

Query: 128 TVKARAASDSTAE 138
           + + R  ++ + E
Sbjct: 133 SAEVRFKANGSME 143

[Close]

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 42  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFA--AG 101
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++ +++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 102 KASADDDGIEILQLYSREISKRTLETVKAR-----AASDSTAENGSSP 143
           +   D DG   +QLY++E SK  LE +K       AA +  +E+  SP
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

[Close]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A0A0L505 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

[Close]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A5A7V8G3 (MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002960 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

[Close]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A1S3BVE8 (MFP1 attachment factor 1-like OS=Cucumis melo OX=3656 GN=LOC103493582 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

[Close]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A6J1IP46 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.0e-58
Identity = 134/160 (83.75%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP +EA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTN-EETPSVEES 160
           RTL+TVKARAASDSTAENGSS PV+STTT+ EETPSV+ES
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

[Close]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL
Match: A0A6J1FAY3 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 132/158 (83.54%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSE +IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSETEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEE 159
           RTL+TVKARAASDSTAENGSS PV+STT  EETPSV+E
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

[Close]

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_004141279.1 (MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_012612 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.2e-71
Identity = 151/159 (94.97%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

[Close]

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_008452611.1 (PREDICTED: MFP1 attachment factor 1-like [Cucumis melo] >KAA0064423.1 MFP1 attachment factor 1-like [Cucumis melo var. makuwa] >TYK20164.1 MFP1 attachment factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 149/159 (93.71%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MS+PQIAA  PTEHDS +PPTDSQ GDQAKESTKSPKSFNTSFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQEEAA+AARLIEEEAYSFAAGKASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDSTAENGSSPPV+STTTNEETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

[Close]

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_038899942.1 (MFP1 attachment factor 1-like [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 145/159 (91.19%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEPQIAA+P TE DSTSP TDSQ GD  KESTKSPKSFNTSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPQIAALPSTEQDSTSPTTDSQAGDLPKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQ+EA++AARLIEEEAYSFAAGKA+ADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQDEASEAARLIEEEAYSFAAGKATADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEES 160
           RTLETVKARAASDST ENGSSPPV+STTTN ETPSVEES
Sbjct: 121 RTLETVKARAASDSTTENGSSPPVVSTTTNAETPSVEES 159

[Close]

BLAST of Lsi04G015120 vs. NCBI nr
Match: KAG6591406.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.7e-58
Identity = 133/158 (84.18%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTNEETPSVEE 159
           RTL+TVKARAASDSTAENGSS PV+STT  EETPSV+E
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

[Close]

BLAST of Lsi04G015120 vs. NCBI nr
Match: XP_023535662.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58
Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MSEPQIAAVPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60
           MSEP+IA VP TE DS         GDQAKES KS KSF+TSFSIWPPSQRTRDAVIKRL
Sbjct: 1   MSEPEIATVPTTEQDSP--------GDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVP EEA DAARLIEEEAYSFAA KASADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKARAASDSTAENGSSPPVLSTTTN-EETPSVEES 160
           RTL+TVKARAASDSTAENGSS PV+STTT+ EETPSV+ES
Sbjct: 121 RTLDTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

[Close]

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.4e-28
Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 15  DSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRY 74
           D TS    S+  D  KE+    K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKRY
Sbjct: 30  DPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRY 89

Query: 75  GTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKARAASDS 134
           GT+  ++A   A+LIEEEAY  A+   S+DDDGI+IL+LYS+EISKR LE+VKAR  S++
Sbjct: 90  GTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR--SNA 149

Query: 135 TAENGS 141
           +  NGS
Sbjct: 150 SVGNGS 153

[Close]

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 114.8 bits (286), Expect = 6.5e-26
Identity = 67/135 (49.63%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 9   VPPTEHDSTSPPTDSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPS 68
           +  TE+ +T P T         E+ K+P     S  IWPP+Q+TRDAVI RLIETLS  S
Sbjct: 17  ISETENSTTLPTT---------ETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTES 76

Query: 69  VLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLETVKA 128
           +LSKR+G++  EEA+  A+ IE+EAY+ A+     DDDGIEIL+ YS+EISKR LE+VKA
Sbjct: 77  ILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKA 135

Query: 129 RAASDSTAENGSSPP 144
           ++       N +SPP
Sbjct: 137 KS-------NVASPP 135

[Close]

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0


Query: 8   AVPPTEHDSTSPPT---DSQGGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRLIETL 67
           + P  + +S S  T        D   E TK  KS    FS+WPP Q++RD V+  +I+TL
Sbjct: 13  STPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTL 72

Query: 68  SNPSVLSKRYGTVPQEEAADAARLIEEEAYSFAAGKASADDDGIEILQLYSREISKRTLE 127
           S  S+LS +YGT+  EEA+  A+ IEE+AY  A+   S+  DGI+ L++Y  E S+R +E
Sbjct: 73  STDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMIE 132

Query: 128 TVKARAASDSTAE 138
           + + R  ++ + E
Sbjct: 133 SAEVRFKANGSME 143

[Close]

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09
Identity = 37/108 (34.26%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 42  SFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEEEAYSFA--AG 101
           S  +WPPS  TR A+I+R+    S+ ++ +++YG++ +++A + A+ IE+ A+S A    
Sbjct: 13  SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query: 102 KASADDDGIEILQLYSREISKRTLETVKAR-----AASDSTAENGSSP 143
           +   D DG   +QLY++E SK  LE +K       AA +  +E+  SP
Sbjct: 73  EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

[Close]

BLAST of Lsi04G015120 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-08
Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 32  STKSPKSFNTSFSIWPPSQRTRDAVIKRLIETLSNPSVLSKRYGTVPQEEAADAARLIEE 91
           S K+ ++   S  +WPPS+ TR  +++R+ + ++ PS+ S++YG +  EEA   A+ IE+
Sbjct: 4   SAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIED 63

Query: 92  EAYSFAAG--KASADDDGIEILQLYSREISKRTLETVKARAASDSTAENGSSPPVLSTTT 151
            A++ A    +   D DG   + +Y++E SK  L+ +K     +S  E      V    +
Sbjct: 64  LAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVEVSKDGDVFFDIS 123

Query: 152 NEETPSVEE 159
                 +EE
Sbjct: 124 GGSRAFIEE 132

The following BLAST results are available for this feature:

BLAST of Lsi04G015120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N6	8.5e-31	56.92	MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1	[more]
Q9C500	3.3e-27	55.56	WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=...	[more]
Q9FMH6	9.1e-25	49.63	WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=...	[more]
Q0WQ91	1.5e-14	38.35	WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=...	[more]
Q9M651	3.5e-08	34.26	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]

BLAST of Lsi04G015120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L505	3.0e-71	94.97	MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1	[more]
A0A5A7V8G3	8.7e-71	93.71	MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BVE8	8.7e-71	93.71	MFP1 attachment factor 1-like OS=Cucumis melo OX=3656 GN=LOC103493582 PE=4 SV=1	[more]
A0A6J1IP46	5.0e-58	83.75	MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 S...	[more]
A0A6J1FAY3	1.1e-57	83.54	MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4...	[more]

BLAST of Lsi04G015120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141279.1	6.2e-71	94.97	MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_...	[more]
XP_008452611.1	1.8e-70	93.71	PREDICTED: MFP1 attachment factor 1-like [Cucumis melo] >KAA0064423.1 MFP1 attac...	[more]
XP_038899942.1	1.1e-67	91.19	MFP1 attachment factor 1-like [Benincasa hispida]	[more]
KAG6591406.1	2.7e-58	84.18	MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023535662.1	4.6e-58	84.38	MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi04G015120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47200.1	2.4e-28	55.56	WPP domain protein 2	[more]
AT5G43070.1	6.5e-26	49.63	WPP domain protein 1	[more]
AT5G27940.1	1.0e-15	38.35	WPP domain protein 3	[more]
AT5G19320.1	2.5e-09	34.26	RAN GTPase activating protein 2	[more]
AT3G63130.1	4.7e-08	28.68	RAN GTPase activating protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 42..134 e-value: 2.4E-38 score: 130.5
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 42..137 e-value: 3.4E-39 score: 135.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..47
None	No IPR available	PANTHER	PTHR34362:SF1	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 1..149
IPR044692	WPP domain-containing protein 1/2/3	PANTHER	PTHR34362	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G015120.1	Lsi04G015120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048527	lateral root development
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005634	nucleus