Lsi04G015090 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATTTCCACTCTCCATGGAAGCTCGGGTGCTTCTGTTAATGGCGGTTATCACTCTTCTGGTCTCCGGTGATAACAAAGCGACAATGGGGGTTGCCCTCGTCGATGAACATCCACTGTCAAACATGCAGGAGAAGCACCGGAAGCATCTGCCGTCCCTGTCGTCGCCCCCGCCGTGGAGTCACTCGTTCAATGCTCTCTTTGCAAGCAAGAGGAAGGTTCCAAACACTTGGGATCCGCTCCACAATCGTTGA ATGCCATTTCCACTCTCCATGGAAGCTCGGGTGCTTCTGTTAATGGCGGTTATCACTCTTCTGGTCTCCGGTGATAACAAAGCGACAATGGGGGTTGCCCTCGTCGATGAACATCCACTGTCAAACATGCAGGAGAAGCACCGGAAGCATCTGCCGTCCCTGTCGTCGCCCCCGCCGTGGAGTCACTCGTTCAATGCTCTCTTTGCAAGCAAGAGGAAGGTTCCAAACACTTGGGATCCGCTCCACAATCGTTGA ATGCCATTTCCACTCTCCATGGAAGCTCGGGTGCTTCTGTTAATGGCGGTTATCACTCTTCTGGTCTCCGGTGATAACAAAGCGACAATGGGGGTTGCCCTCGTCGATGAACATCCACTGTCAAACATGCAGGAGAAGCACCGGAAGCATCTGCCGTCCCTGTCGTCGCCCCCGCCGTGGAGTCACTCGTTCAATGCTCTCTTTGCAAGCAAGAGGAAGGTTCCAAACACTTGGGATCCGCTCCACAATCGTTGA MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR Homology
BLAST of Lsi04G015090 vs. ExPASy TrEMBL
Match: A0A0A0KZW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641770 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.7e-29 Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Lsi04G015090 vs. ExPASy TrEMBL
Match: A0A5D3D9C5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002930 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.8e-20 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Lsi04G015090 vs. ExPASy TrEMBL
Match: A0A067L375 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16070 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.7e-04 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of Lsi04G015090 vs. ExPASy TrEMBL
Match: A0A5N5GV11 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_015318 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.3e-04 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of Lsi04G015090 vs. NCBI nr
Match: KAE8649873.1 (hypothetical protein Csa_012848, partial [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 5.1e-24 Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Lsi04G015090 vs. NCBI nr
Match: KAA0064426.1 (hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa] >TYK20161.1 hypothetical protein E5676_scaffold134G002930 [Cucumis melo var. makuwa]) HSP 1 Score: 107.5 bits (267), Expect = 5.9e-20 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Lsi04G015090 vs. NCBI nr
Match: KDP41663.1 (hypothetical protein JCGZ_16070 [Jatropha curcas]) HSP 1 Score: 53.9 bits (128), Expect = 7.7e-04 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|