Lsi04G014920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G014920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription factor bHLH139-like
Location	chr04: 22609862 .. 22611717 (-)
RNA-Seq Expression	Lsi04G014920
Synteny	Lsi04G014920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTTCGGAGGTTTCAATGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCATTGGAAGACCTTGATTTTACGCCTATTAATATTAATATTCCTGATCAACCCACTTCAGGCTTCATGGCCGATGCTTGGTTTTGTTCTTTGGATTCCTTCACTGCTAATTTGCCTTCTTTTCATGTTGGTAATGCTATTGATCAGTTTGCTGCTGCTGCTTCTGATCAACATCATCATCATCATCATCATATATCCATGTCAATTGAAGAGAATAAGATGGAATCCATTTTCTCAGCTTCTAGTACTGAAATCTTGCTGCAAGAAATCGCTGGCTTTTCGAATGAAGATAAATTTCTTAACATGGATGTTCAAACCCACCTAGGGGATGATGGTAATAATGCTACCAATAATTCTGCAAACGCAGCATTCCACCATAAAAGGAAATCCATTGTTGTCGATGATGATCATAACAAGCTCATCAACCCCAATAAGAAAATTCGTACTTCAAACAATGTAAGTAAATCTTACTCTTTTTAGCTTTGAAGTAGGGATAGAATTAAATAATATGATTAAACGTACCGTCTAGGTTGTATTTATCTCTATAAGGTCCTCTTTTATTATTAGAAAGAATTACAAAAAATAATTATATATTTTTTTAATGTTCGTCTCATGTGTCAATTTTTAATTAGGTAATTAAGGTGAGTTGTTTAAAGATAAATACAATCTAACCAATACAAACTTGAGTTTCTTTTAACTTGTGTGATCATTTTCACTCCGTAACATTAGTGAAAAAATATTAAAAATTTATTTTCCTTTTTTTAAAAAAAGGTGTTTACCATATGATATTATGAATAGAAGAAGACGAAGTAGAAAAGAGAAAACATGCAGAAAATTAAAGATCAGTAAAGAGCACTTTCATTCAACTGATATTTAATAATACTGGAAAAATCTAGGAGTATTTATTTATGTATTTTTTTTCATAAATAACTGTGTTATAATGGTTTTATAATTTAGGTGCAGAAAAGTAGGAAGGGCAGAGAATCAAGTGGTAATAGTAATAGCAAATTAGAGAAAGTGAGCAGTACTCGGCGGCGCAAATGTGAAGAAGAACAAGAAAATGGGGGGTCGTGCGATATGAACAGTTGCAGCAGCGATAGCTCATCAGAAAACGACAATGCTTCACAAGATACTAATAATGGCGATGCCACCGTTTTAGAGCCACCAAAACCCAAAACAAGAGCCACCAGAGGCTCAGCAACTGATCCACAAAGCCTTTACGCAAGGGTACGGTATATATATATACGAATTATTAAAAATATATATATATAACTGATAATTTTTTTTTATCTATTTATAATTACGTAATAATTCTAAACTAATTTGGTATGGTTTGAACCAATAATGAATGCAGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTAATAATAAAGCAAATTAATATGATTTAATTAATTCATTACTTAAAGGCTTTATTTAATTATATTTATAAATGGGTTCTGAAATTGGACTATTATTATATTTTTCAGGTTGACATTAGCACAATGCTTGAGGAAGCAGTTCATTACGTAAAATTTCTGCAGCTTCAGATAAAGGTATATATGGACTTCAAATTTATTAACATTTGTTCGCATTAAATTAACTCATAACTAGCTATTTTTCAAATTAATTAATCAATGATTTGTTGGGTTTTTTAATTTGCAGCTTTTGAGCTCTGATGAGTTGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTCCAGCAGAAGCTTTCTTCATTTTTATGA

mRNA sequence

ATGGATTCTTTCGGAGGTTTCAATGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCATTGGAAGACCTTGATTTTACGCCTATTAATATTAATATTCCTGATCAACCCACTTCAGGCTTCATGGCCGATGCTTGGTTTTGTTCTTTGGATTCCTTCACTGCTAATTTGCCTTCTTTTCATGTTGGTAATGCTATTGATCAGTTTGCTGCTGCTGCTTCTGATCAACATCATCATCATCATCATCATATATCCATGTCAATTGAAGAGAATAAGATGGAATCCATTTTCTCAGCTTCTAGTACTGAAATCTTGCTGCAAGAAATCGCTGGCTTTTCGAATGAAGATAAATTTCTTAACATGGATGTTCAAACCCACCTAGGGGATGATGGTAATAATGCTACCAATAATTCTGCAAACGCAGCATTCCACCATAAAAGGAAATCCATTGTTGTCGATGATGATCATAACAAGCTCATCAACCCCAATAAGAAAATTCGTACTTCAAACAATGTGCAGAAAAGTAGGAAGGGCAGAGAATCAAGTGGTAATAGTAATAGCAAATTAGAGAAAGTGAGCAGTACTCGGCGGCGCAAATGTGAAGAAGAACAAGAAAATGGGGGGTCGTGCGATATGAACAGTTGCAGCAGCGATAGCTCATCAGAAAACGACAATGCTTCACAAGATACTAATAATGGCGATGCCACCGTTTTAGAGCCACCAAAACCCAAAACAAGAGCCACCAGAGGCTCAGCAACTGATCCACAAAGCCTTTACGCAAGGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGACATTAGCACAATGCTTGAGGAAGCAGTTCATTACGTAAAATTTCTGCAGCTTCAGATAAAGCTTTTGAGCTCTGATGAGTTGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTCCAGCAGAAGCTTTCTTCATTTTTATGA

Coding sequence (CDS)

ATGGATTCTTTCGGAGGTTTCAATGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCATTGGAAGACCTTGATTTTACGCCTATTAATATTAATATTCCTGATCAACCCACTTCAGGCTTCATGGCCGATGCTTGGTTTTGTTCTTTGGATTCCTTCACTGCTAATTTGCCTTCTTTTCATGTTGGTAATGCTATTGATCAGTTTGCTGCTGCTGCTTCTGATCAACATCATCATCATCATCATCATATATCCATGTCAATTGAAGAGAATAAGATGGAATCCATTTTCTCAGCTTCTAGTACTGAAATCTTGCTGCAAGAAATCGCTGGCTTTTCGAATGAAGATAAATTTCTTAACATGGATGTTCAAACCCACCTAGGGGATGATGGTAATAATGCTACCAATAATTCTGCAAACGCAGCATTCCACCATAAAAGGAAATCCATTGTTGTCGATGATGATCATAACAAGCTCATCAACCCCAATAAGAAAATTCGTACTTCAAACAATGTGCAGAAAAGTAGGAAGGGCAGAGAATCAAGTGGTAATAGTAATAGCAAATTAGAGAAAGTGAGCAGTACTCGGCGGCGCAAATGTGAAGAAGAACAAGAAAATGGGGGGTCGTGCGATATGAACAGTTGCAGCAGCGATAGCTCATCAGAAAACGACAATGCTTCACAAGATACTAATAATGGCGATGCCACCGTTTTAGAGCCACCAAAACCCAAAACAAGAGCCACCAGAGGCTCAGCAACTGATCCACAAAGCCTTTACGCAAGGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGACATTAGCACAATGCTTGAGGAAGCAGTTCATTACGTAAAATTTCTGCAGCTTCAGATAAAGCTTTTGAGCTCTGATGAGTTGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTCCAGCAGAAGCTTTCTTCATTTTTATGA

Protein sequence

MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPSFHVGNAIDQFAAAASDQHHHHHHHISMSIEENKMESIFSASSTEILLQEIAGFSNEDKFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDDHNKLINPNKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL

Homology

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BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-38
Identity = 110/192 (57.29%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 147 KRKSIVVDDDHNKLINPNKKIRTSNNVQKS---RKGRESSGNSNSKLEKVSSTRRRK--- 206
           K++S     D NK    NK  R   NV+ S    +G E  G +  K  K  +   R+   
Sbjct: 171 KKRSRATSTDKNKRARVNK--RAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSS 230

Query: 207 ---CEEEQENGGSCDMNSCSSDSSSENDNASQDTN-NGDATVLEPPKPKTRATRGSATDP 266
              C EE+ N    D +    DSSS+ D+ S+  N NG          KTRA+RG+ATDP
Sbjct: 231 TTFCTEEESN--CADQDGGGEDSSSKEDDPSKALNLNG----------KTRASRGAATDP 290

Query: 267 QSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMY 326
           QSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD+LWMY
Sbjct: 291 QSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMY 348

Query: 327 APIAYNGMDIGL 329
           APIA+NGMDIGL
Sbjct: 351 APIAFNGMDIGL 348

[Close]

BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.3e-36
Identity = 103/188 (54.79%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 147 KRKSIVVDDDHNKLINPNKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQE 206
           K+++     D NK    NK  R+   V+ S  G   +       EK +  R+ K  + Q+
Sbjct: 150 KKRTRATTTDKNK--RANKARRSQKCVEMS--GENENSGEEEYTEKAAGKRKTKPLKPQK 209

Query: 207 NGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRE 266
                    CS D S+  D      +  D+  L     KTRA+RG+ATDPQSLYARKRRE
Sbjct: 210 -------TCCSDDESNGGDTFLSKEDGEDSKALN-LNGKTRASRGAATDPQSLYARKRRE 269

Query: 267 RINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDI 326
           RINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSD+LWMYAPIAYNGMDI
Sbjct: 270 RINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 325

Query: 327 GLQQKLSS 335
           GL  KL++
Sbjct: 330 GLDLKLNA 325

[Close]

BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-33
Identity = 86/152 (56.58%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 185 NSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKP 244
           NSN  + +    + +K +       + D ++ +        N+S D      +V    K 
Sbjct: 110 NSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSV----KG 169

Query: 245 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 304
           KTRAT+G+ATDPQSLYARKRRE+INERL+ LQ LVPNGTKVDISTMLEEAVHYVKFLQLQ
Sbjct: 170 KTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 229

Query: 305 IKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           IKLLSSD+LWMYAP+AYNG+D+G    L S L
Sbjct: 230 IKLLSSDDLWMYAPLAYNGLDMGFHHNLLSRL 257

[Close]

BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.1e-30
Identity = 88/173 (50.87%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 164 NKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSE 223
           N+ + +  ++ K RK ++ S  SN   E  ++ R              D  S SS +SS+
Sbjct: 68  NRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWR--------------DGQSLSSYNSSD 127

Query: 224 NDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGT 283
           ++ A    +N   ++    K K +A RG A+DPQSLYARKRRERIN+RL+ LQ LVPNGT
Sbjct: 128 DEKALGLVSNTSKSL----KRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 187

Query: 284 KVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           KVDISTMLE+AVHYVKFLQLQIKLLSS++LWMYAP+A+NG+++GL   L S L
Sbjct: 188 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSRL 222

[Close]

BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-24
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 252 SATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD 311
           SA   QS YA+ RR+RINERLRILQ+L+PNGTKVDISTMLEEA+ YVKFL LQIKLLSSD
Sbjct: 114 SAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIKLLSSD 173

Query: 312 ELWMYAPIAYNGMDIGLQQ 331
           E+WMYAP+A++  +  L Q
Sbjct: 174 EMWMYAPLAFDSGNNRLYQ 192

[Close]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL
Match: A0A6J1FEZ9 (transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111443476 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.5e-108
Identity = 245/345 (71.01%), Postives = 273/345 (79.13%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGG  GEGEWDLCSSILS+E+LDFTP+   IP  P +  M D WFC LDSFT NLPS
Sbjct: 1   MDSFGGLGGEGEWDLCSSILSMEELDFTPL---IP--PPTAEMPD-WFCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMS---IEENKMESIFSASSTEILLQEIAGFSNED 120
              GNAIDQF   A+       H++SMS   IEENKM+SIFSA  T++LLQEI+ FS ED
Sbjct: 61  --CGNAIDQFPCIAAAD-----HYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGED 120

Query: 121 KFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD---HNKLINPNKKIRTSNNVQ 180
           ++LNMDVQT +G+D +NATN++   AFHHKRKSIVV DD   HN L NP KKIRTSNN  
Sbjct: 121 RYLNMDVQTQIGND-HNATNSA--KAFHHKRKSIVVADDDHHHNNLNNPTKKIRTSNN-- 180

Query: 181 KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNG 240
              K R+++ NSN KL    STRRRKCEE+QE+GG  DMNSCSS +SSE+D+ASQDTN G
Sbjct: 181 ---KIRKATPNSNKKL----STRRRKCEEDQESGGP-DMNSCSSANSSEDDSASQDTNGG 240

Query: 241 DATV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 300
            A +     PPK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML
Sbjct: 241 GAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 300

Query: 301 EEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           EEAVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIGL QKL SFL
Sbjct: 301 EEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 318

[Close]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL
Match: A0A6J1IQF1 (transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111477249 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.2e-107
Identity = 243/346 (70.23%), Postives = 274/346 (79.19%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGG +GEGEWDLCSSILS+E+LDFTP+   +P  P +  MAD WFC LDSFT NLPS
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPL---LP--PPTAEMAD-WFCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMS---IEENKMESIFSASSTEILLQEIAGFSNED 120
               NAIDQF   A+       H++SMS   IEEN+M+SIFSA  T++LLQEI+ FS ED
Sbjct: 61  --CANAIDQFPCIAAAD-----HYMSMSNAAIEENEMDSIFSA-CTDVLLQEISVFSGED 120

Query: 121 KFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD----HNKLINPNKKIRTSNNV 180
           ++LNMDVQT +G+D NNATN++   AFHHKRKSIVV DD    HN L NP KKIRTSNN 
Sbjct: 121 RYLNMDVQTQIGND-NNATNSA--KAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNN- 180

Query: 181 QKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNN 240
               K R+++ NSN KL    STRRRKCEE+QE+GG  DMNSCSS +SSE+D+ASQDTN 
Sbjct: 181 ----KIRKATQNSNKKL----STRRRKCEEDQESGGP-DMNSCSSANSSEDDSASQDTNG 240

Query: 241 GDATV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300
           G A +     PP+ KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM
Sbjct: 241 GGAVLEGEASPPQAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300

Query: 301 LEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           LEEAVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIGL QKL SFL
Sbjct: 301 LEEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL
Match: A0A0A0L533 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642470 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.9e-100
Identity = 246/359 (68.52%), Postives = 268/359 (74.65%), Query Frame = 0


Query: 1   MDSFGG-FNGE-GEWDLCSSILSLEDLDFTPININIPDQPTSGFMAD--AWFCSLDSFTA 60
           MD FGG  +GE GEWDLCSSILSLED D+  I IN     + G MAD  AWFCS      
Sbjct: 1   MDCFGGNLSGEAGEWDLCSSILSLEDPDYMHI-INPHPTTSPGLMADHAAWFCS------ 60

Query: 61  NLPSFHVGNAIDQF------AAAASDQHHHHHHHISMSI---EENKMESIFSASSTEILL 120
           NL S    N +DQ+      AAAA    ++ H+H+SMSI   + N +ESIFSASSTE LL
Sbjct: 61  NLDS----NGVDQYPFPCIAAAAAVYDDYYGHNHMSMSIIDEDNNNLESIFSASSTEFLL 120

Query: 121 QEIA--GFSNEDKFLNMD-VQTHLGDDGNNATNNSANAAFHHKRKSIVV-----DDDHNK 180
           QEI+  GFS + KFLNMD VQTHLGD+ ++      N  FHHKRKS +V     D D N+
Sbjct: 121 QEISSTGFSEDHKFLNMDIVQTHLGDEDDD------NPLFHHKRKSSIVAPDDHDHDQNQ 180

Query: 181 LINPNKKIRTSNNVQ-KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENG-GSCDMNSCS 240
           LI PNKKIRTSNNVQ KSRKG ESSGNS    +KVSSTRRRKCEEEQENG  SCDMNSCS
Sbjct: 181 LIKPNKKIRTSNNVQIKSRKGTESSGNS----KKVSSTRRRKCEEEQENGRSSCDMNSCS 240

Query: 241 SDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQK 300
           SD+SSE+DN     NN        PKPKTRATRGSATDPQSLYARKRRERINERLRILQK
Sbjct: 241 SDNSSEDDN-----NNAS------PKPKTRATRGSATDPQSLYARKRRERINERLRILQK 300

Query: 301 LVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           LVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD+LWMYAPIAYNGMDIGLQQKLSS L
Sbjct: 301 LVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKLSSIL 327

[Close]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL
Match: A0A1S3BU96 (transcription factor bHLH85-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493599 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.0e-97
Identity = 242/360 (67.22%), Postives = 268/360 (74.44%), Query Frame = 0


Query: 1   MDSFGGFNGE--GEWDLCSSILSLEDLDFTPININIPDQPTS--GFMAD--AWFCSLDSF 60
           MD FGG +G+  GEWDLCSSILSLED DF  ++INI  QPT+  G MAD  AWFCS   +
Sbjct: 1   MDCFGGMSGDQAGEWDLCSSILSLEDPDF--MHINIDPQPTTSPGLMADHAAWFCSNLDY 60

Query: 61  TANLPSFHVGNAIDQFAAAASDQHHHHHHHISMSI--EENK-MESIFSASSTEILLQEIA 120
           +      +    I   AAAA D  ++ H+H+SMSI  E+NK +ESIFSASS +ILLQ I+
Sbjct: 61  SNGTVDHYQFPCIAAAAAAAYDD-YYGHNHMSMSIIDEDNKNLESIFSASSADILLQGIS 120

Query: 121 --GFSNED-KFLNMD-VQTHLGDDGNNATNNSANAAFHHKRKSIVV---------DDDHN 180
             GFS+ED KFLNMD VQTHLG        +  N  FHHKRKS +V         D D N
Sbjct: 121 GTGFSSEDHKFLNMDIVQTHLG----VGDEDDDNPLFHHKRKSSIVAADDHDHDHDHDQN 180

Query: 181 KLINPNKKIRTSNNVQ-KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENG-GSCDMNSC 240
           +LI PNKKIRTSNNVQ KS+KG ES        +KVSSTRRRKCEEEQENG  SCDMNSC
Sbjct: 181 QLIKPNKKIRTSNNVQIKSKKGTES--------KKVSSTRRRKCEEEQENGRSSCDMNSC 240

Query: 241 SSDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQ 300
           SSD+SSE+D      NN +A+    PKPKTRATRGSATDPQSLYARKRRERINERLRILQ
Sbjct: 241 SSDNSSEDD------NNNNAS----PKPKTRATRGSATDPQSLYARKRRERINERLRILQ 300

Query: 301 KLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           KLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSS L
Sbjct: 301 KLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSIL 335

[Close]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL
Match: A0A5D3D9B7 (Transcription factor bHLH85-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002780 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.4e-94
Identity = 236/348 (67.82%), Postives = 260/348 (74.71%), Query Frame = 0


Query: 11  GEWDLCSSILSLEDLDFTPININIPDQPTS--GFMAD--AWFCSLDSFTANLPSFHVGNA 70
           GEWDLCSSILSLED DF  ++INI  QPT+  G MAD  AWFCS   ++      +    
Sbjct: 7   GEWDLCSSILSLEDPDF--MHINIDPQPTTSPGLMADHAAWFCSNLDYSNGTVDHYQFPC 66

Query: 71  IDQFAAAASDQHHHHHHHISMSI--EENK-MESIFSASSTEILLQEIA--GFSNED-KFL 130
           I   AAAA D  ++ H+H+SMSI  E+NK +ESIFSASS +ILLQ I+  GFS+ED KFL
Sbjct: 67  IAAAAAAAYDD-YYGHNHMSMSIIDEDNKNLESIFSASSADILLQGISGTGFSSEDHKFL 126

Query: 131 NMD-VQTHLGDDGNNATNNSANAAFHHKRKSIVV---------DDDHNKLINPNKKIRTS 190
           NMD VQTHLG        +  N  FHHKRKS +V         D D N+LI PNKKIRTS
Sbjct: 127 NMDIVQTHLG----VGDEDDDNPLFHHKRKSSIVAADDHDHDHDHDQNQLIKPNKKIRTS 186

Query: 191 NNVQ-KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENG-GSCDMNSCSSDSSSENDNAS 250
           NNVQ KS+KG ES        +KVSSTRRRKCEEEQENG  SCDMNSCSSD+SSE+D   
Sbjct: 187 NNVQIKSKKGTES--------KKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDD--- 246

Query: 251 QDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDIS 310
              NN +A+    PKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDIS
Sbjct: 247 ---NNNNAS----PKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDIS 306

Query: 311 TMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           TMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSS L
Sbjct: 307 TMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSIL 329

[Close]

BLAST of Lsi04G014920 vs. NCBI nr
Match: XP_038900078.1 (transcription factor bHLH139 [Benincasa hispida])

HSP 1 Score: 441.0 bits (1133), Expect = 9.0e-120
Identity = 262/343 (76.38%), Postives = 275/343 (80.17%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGGF+GEGEWDLCSSILSLED DFTPI  N+  QP +     AWF S      NLPS
Sbjct: 1   MDSFGGFSGEGEWDLCSSILSLEDFDFTPI-YNVIPQPDA-----AWFYS------NLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMSIEENK-MESIFSASSTEILLQEIAGFSNEDKF 120
            HVGN IDQF        HHH HH     +ENK M+SIFSAS+TEIL+QEI GFS+EDKF
Sbjct: 61  CHVGNDIDQFPCNIIAADHHHLHHYD---QENKIMDSIFSASTTEILMQEITGFSSEDKF 120

Query: 121 LNMDVQTHLG---DDGNNATNNSANAAFHHKRKSIVV--DDDHNKLINPNKKIRTSNNVQ 180
           +NMDVQT LG   DD NNAT NSANA F HKRKSIVV  D DHNKLINPNKK RTSNNVQ
Sbjct: 121 VNMDVQTRLGDDDDDDNNAT-NSANALFQHKRKSIVVADDHDHNKLINPNKKSRTSNNVQ 180

Query: 181 KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENG-GSCDMNSCSSDSSSENDNASQDTNN 240
           KSRK RE S N+ S   KVS TRRRKCEE++ENG GSCDMNSCSSD SSE+DNASQ TN 
Sbjct: 181 KSRKSRELSDNTKSNGIKVSPTRRRKCEEKEENGAGSCDMNSCSSDDSSEDDNASQHTN- 240

Query: 241 GDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE 300
                 EPPKPKTRA RGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE
Sbjct: 241 -----AEPPKPKTRAIRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE 300

Query: 301 AVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           AVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSS L
Sbjct: 301 AVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSIL 321

[Close]

BLAST of Lsi04G014920 vs. NCBI nr
Match: XP_022937063.1 (transcription factor bHLH139-like [Cucurbita moschata])

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-107
Identity = 245/345 (71.01%), Postives = 273/345 (79.13%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGG  GEGEWDLCSSILS+E+LDFTP+   IP  P +  M D WFC LDSFT NLPS
Sbjct: 1   MDSFGGLGGEGEWDLCSSILSMEELDFTPL---IP--PPTAEMPD-WFCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMS---IEENKMESIFSASSTEILLQEIAGFSNED 120
              GNAIDQF   A+       H++SMS   IEENKM+SIFSA  T++LLQEI+ FS ED
Sbjct: 61  --CGNAIDQFPCIAAAD-----HYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGED 120

Query: 121 KFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD---HNKLINPNKKIRTSNNVQ 180
           ++LNMDVQT +G+D +NATN++   AFHHKRKSIVV DD   HN L NP KKIRTSNN  
Sbjct: 121 RYLNMDVQTQIGND-HNATNSA--KAFHHKRKSIVVADDDHHHNNLNNPTKKIRTSNN-- 180

Query: 181 KSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNG 240
              K R+++ NSN KL    STRRRKCEE+QE+GG  DMNSCSS +SSE+D+ASQDTN G
Sbjct: 181 ---KIRKATPNSNKKL----STRRRKCEEDQESGGP-DMNSCSSANSSEDDSASQDTNGG 240

Query: 241 DATV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 300
            A +     PPK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML
Sbjct: 241 GAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTML 300

Query: 301 EEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           EEAVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIGL QKL SFL
Sbjct: 301 EEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 318

[Close]

BLAST of Lsi04G014920 vs. NCBI nr
Match: XP_022977069.1 (transcription factor bHLH54-like [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 6.7e-107
Identity = 243/346 (70.23%), Postives = 274/346 (79.19%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGG +GEGEWDLCSSILS+E+LDFTP+   +P  P +  MAD WFC LDSFT NLPS
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPL---LP--PPTAEMAD-WFCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMS---IEENKMESIFSASSTEILLQEIAGFSNED 120
               NAIDQF   A+       H++SMS   IEEN+M+SIFSA  T++LLQEI+ FS ED
Sbjct: 61  --CANAIDQFPCIAAAD-----HYMSMSNAAIEENEMDSIFSA-CTDVLLQEISVFSGED 120

Query: 121 KFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD----HNKLINPNKKIRTSNNV 180
           ++LNMDVQT +G+D NNATN++   AFHHKRKSIVV DD    HN L NP KKIRTSNN 
Sbjct: 121 RYLNMDVQTQIGND-NNATNSA--KAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNN- 180

Query: 181 QKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNN 240
               K R+++ NSN KL    STRRRKCEE+QE+GG  DMNSCSS +SSE+D+ASQDTN 
Sbjct: 181 ----KIRKATQNSNKKL----STRRRKCEEDQESGGP-DMNSCSSANSSEDDSASQDTNG 240

Query: 241 GDATV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300
           G A +     PP+ KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM
Sbjct: 241 GGAVLEGEASPPQAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300

Query: 301 LEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           LEEAVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIGL QKL SFL
Sbjct: 301 LEEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Lsi04G014920 vs. NCBI nr
Match: XP_023536485.1 (transcription factor bHLH84-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 4.3e-106
Identity = 241/343 (70.26%), Postives = 271/343 (79.01%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSFGG +GEGEWDLCSSILS+E+LDFTP+   IP  P +  M D WFC LDSFT NLPS
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPL---IP--PPTAEMPD-WFCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMSIEENKMESIFSASSTEILLQEIAGFSNEDKFL 120
              GNAIDQF   A+  H+      + +I+ENKM+SIFSA  T++LLQEI+ FS ED++L
Sbjct: 61  --CGNAIDQFPCIAAADHYMPMS--NAAIDENKMDSIFSA-CTDVLLQEISVFSGEDRYL 120

Query: 121 NMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD----HNKLINPNKKIRTSNNVQKS 180
           NMDVQT +G+D +NATN++   AFHHKRKSIVV DD    HN L NP KKIRTSNN    
Sbjct: 121 NMDVQTQIGND-HNATNSA--KAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNN---- 180

Query: 181 RKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNGDA 240
            K R+++ NSN KL    STRRRKCEE+QENGG  DMNSC S +SSE+D+ASQDTN G A
Sbjct: 181 -KIRKATQNSNKKL----STRRRKCEEDQENGGP-DMNSCCSANSSEDDSASQDTNGGGA 240

Query: 241 TV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE 300
            +     PPK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE
Sbjct: 241 VLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEE 300

Query: 301 AVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           AVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIGL QKL SFL
Sbjct: 301 AVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Lsi04G014920 vs. NCBI nr
Match: KAG6591418.1 (Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.3 bits (991), Expect = 2.6e-103
Identity = 238/340 (70.00%), Postives = 268/340 (78.82%), Query Frame = 0


Query: 1   MDSFGGFNGEGEWDLCSSILSLEDLDFTPININIPDQPTSGFMADAWFCSLDSFTANLPS 60
           MDSF G  GEGEWDLCSSILS+E+LDFTP+   IP  P +  M D W C LDSFT NLPS
Sbjct: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPL---IP--PPTAEMPD-WVCHLDSFTPNLPS 60

Query: 61  FHVGNAIDQFAAAASDQHHHHHHHISMS---IEENKMESIFSASSTEILLQEIAGFSNED 120
              GNAIDQF   A+       H++SMS   IEENKM+SIFSA  T++LLQEI+ FS ED
Sbjct: 61  --CGNAIDQFPCIAAAD-----HYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGED 120

Query: 121 KFLNMDVQTHLGDDGNNATNNSANAAFHHKRKSIVVDDD----HNKLINPNKKIRTSNNV 180
           ++LNMDVQT +G+D +NATN++   AFHHKRKSIVV DD    HNKL NP KKIRTSNN 
Sbjct: 121 RYLNMDVQTQIGND-HNATNSA--KAFHHKRKSIVVADDDHHHHNKLNNPTKKIRTSNN- 180

Query: 181 QKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNN 240
               K R+++ NSN KL    STRRRKCEE+QE+GG  DMNSCSS +SSE+D+ASQDTN 
Sbjct: 181 ----KIRKATQNSNKKL----STRRRKCEEDQESGGP-DMNSCSSANSSEDDSASQDTNG 240

Query: 241 GDATV---LEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300
           G A +     PPK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM
Sbjct: 241 GGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300

Query: 301 LEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQ 331
           LEEAVHYVKFLQLQIKLLSSDE+WMYAPIAYNGMDIG++Q
Sbjct: 301 LEEAVHYVKFLQLQIKLLSSDEMWMYAPIAYNGMDIGVKQ 313

[Close]

BLAST of Lsi04G014920 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 110/192 (57.29%), Postives = 126/192 (65.62%), Query Frame = 0


Query: 147 KRKSIVVDDDHNKLINPNKKIRTSNNVQKS---RKGRESSGNSNSKLEKVSSTRRRK--- 206
           K++S     D NK    NK  R   NV+ S    +G E  G +  K  K  +   R+   
Sbjct: 171 KKRSRATSTDKNKRARVNK--RAQKNVEMSGDNNEGEEEEGETKLKKRKNGAMMSRQNSS 230

Query: 207 ---CEEEQENGGSCDMNSCSSDSSSENDNASQDTN-NGDATVLEPPKPKTRATRGSATDP 266
              C EE+ N    D +    DSSS+ D+ S+  N NG          KTRA+RG+ATDP
Sbjct: 231 TTFCTEEESN--CADQDGGGEDSSSKEDDPSKALNLNG----------KTRASRGAATDP 290

Query: 267 QSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMY 326
           QSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD+LWMY
Sbjct: 291 QSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMY 348

Query: 327 APIAYNGMDIGL 329
           APIA+NGMDIGL
Sbjct: 351 APIAFNGMDIGL 348

[Close]

BLAST of Lsi04G014920 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 5.9e-37
Identity = 103/188 (54.79%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 147 KRKSIVVDDDHNKLINPNKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQE 206
           K+++     D NK    NK  R+   V+ S  G   +       EK +  R+ K  + Q+
Sbjct: 150 KKRTRATTTDKNK--RANKARRSQKCVEMS--GENENSGEEEYTEKAAGKRKTKPLKPQK 209

Query: 207 NGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRE 266
                    CS D S+  D      +  D+  L     KTRA+RG+ATDPQSLYARKRRE
Sbjct: 210 -------TCCSDDESNGGDTFLSKEDGEDSKALN-LNGKTRASRGAATDPQSLYARKRRE 269

Query: 267 RINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDI 326
           RINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSD+LWMYAPIAYNGMDI
Sbjct: 270 RINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 325

Query: 327 GLQQKLSS 335
           GL  KL++
Sbjct: 330 GLDLKLNA 325

[Close]

BLAST of Lsi04G014920 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 145.6 bits (366), Expect = 7.2e-35
Identity = 86/152 (56.58%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 185 NSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKP 244
           NSN  + +    + +K +       + D ++ +        N+S D      +V    K 
Sbjct: 110 NSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSDDEKASVTSV----KG 169

Query: 245 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 304
           KTRAT+G+ATDPQSLYARKRRE+INERL+ LQ LVPNGTKVDISTMLEEAVHYVKFLQLQ
Sbjct: 170 KTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 229

Query: 305 IKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           IKLLSSD+LWMYAP+AYNG+D+G    L S L
Sbjct: 230 IKLLSSDDLWMYAPLAYNGLDMGFHHNLLSRL 257

[Close]

BLAST of Lsi04G014920 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-34
Identity = 103/201 (51.24%), Postives = 121/201 (60.20%), Query Frame = 0


Query: 147 KRKSIVVDDDHNKLINPNKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQE 206
           K+++     D NK    NK  R+   V+ S  G   +       EK +  R+ K  + Q+
Sbjct: 150 KKRTRATTTDKNK--RANKARRSQKCVEMS--GENENSGEEEYTEKAAGKRKTKPLKPQK 209

Query: 207 NGGSCDMNSCSSDSSSENDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYAR---- 266
                    CS D S+  D      +  D+  L     KTRA+RG+ATDPQSLYAR    
Sbjct: 210 -------TCCSDDESNGGDTFLSKEDGEDSKALN-LNGKTRASRGAATDPQSLYARLKQL 269

Query: 267 ---------KRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEL 326
                    KRRERINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIKLLSSD+L
Sbjct: 270 NKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDL 329

Query: 327 WMYAPIAYNGMDIGLQQKLSS 335
           WMYAPIAYNGMDIGL  KL++
Sbjct: 330 WMYAPIAYNGMDIGLDLKLNA 338

[Close]

BLAST of Lsi04G014920 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-32
Identity = 88/173 (50.87%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 164 NKKIRTSNNVQKSRKGRESSGNSNSKLEKVSSTRRRKCEEEQENGGSCDMNSCSSDSSSE 223
           N+ + +  ++ K RK ++ S  SN   E  ++ R              D  S SS +SS+
Sbjct: 68  NRNVDSRQDLLKPRKKQKLSSESNLVTEPKTAWR--------------DGQSLSSYNSSD 127

Query: 224 NDNASQDTNNGDATVLEPPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGT 283
           ++ A    +N   ++    K K +A RG A+DPQSLYARKRRERIN+RL+ LQ LVPNGT
Sbjct: 128 DEKALGLVSNTSKSL----KRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 187

Query: 284 KVDISTMLEEAVHYVKFLQLQIKLLSSDELWMYAPIAYNGMDIGLQQKLSSFL 337
           KVDISTMLE+AVHYVKFLQLQIKLLSS++LWMYAP+A+NG+++GL   L S L
Sbjct: 188 KVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLLSRL 222

The following BLAST results are available for this feature:

BLAST of Lsi04G014920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WK0	2.3e-38	57.29	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q7XHI9	8.3e-36	54.79	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q8LEG1	1.0e-33	56.58	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	1.1e-30	50.87	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	2.5e-24	72.15	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Lsi04G014920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEZ9	6.5e-108	71.01	transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111443476 ...	[more]
A0A6J1IQF1	3.2e-107	70.23	transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111477249 PE=...	[more]
A0A0A0L533	2.9e-100	68.52	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642470 PE=4 S...	[more]
A0A1S3BU96	3.0e-97	67.22	transcription factor bHLH85-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493...	[more]
A0A5D3D9B7	1.4e-94	67.82	Transcription factor bHLH85-like isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lsi04G014920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900078.1	9.0e-120	76.38	transcription factor bHLH139 [Benincasa hispida]	[more]
XP_022937063.1	1.3e-107	71.01	transcription factor bHLH139-like [Cucurbita moschata]	[more]
XP_022977069.1	6.7e-107	70.23	transcription factor bHLH54-like [Cucurbita maxima]	[more]
XP_023536485.1	4.3e-106	70.26	transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]	[more]
KAG6591418.1	2.6e-103	70.00	Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma ...	[more]

BLAST of Lsi04G014920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33880.1	1.7e-39	57.29	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT2G14760.1	5.9e-37	54.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	7.2e-35	56.58	root hair defective 6-like 4	[more]
AT2G14760.3	3.6e-34	51.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G43175.1	7.5e-32	50.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 258..307 e-value: 3.8E-11 score: 53.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 262..302 e-value: 9.9E-9 score: 35.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 252..301 score: 15.046477
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 254..310 e-value: 2.2E-11 score: 45.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 251..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..236
None	No IPR available	PANTHER	PTHR16223:SF143	TRANSCRIPTION FACTOR BHLH54	coord: 66..334
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 66..334
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 253..315 e-value: 2.1026E-38 score: 129.049

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014920.1	Lsi04G014920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding