Lsi04G014840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G014840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionZCF37, putative
Locationchr04: 22528950 .. 22529567 (+)
RNA-Seq ExpressionLsi04G014840
SyntenyLsi04G014840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTCATGAATCAGTGTCCCCAAATTCCACTCCCAAAAAGTCCAGAAATGGACACAAAACCCACAACAAAGACAAGAAAAATCCTTACTCTGACCGTGGCCTCGACAAATTCTCTGCCCTTTTAACCGATCTTGATGAGAAAAGGAAGAAAATTTACTCTCGAGTTGACCCTGAAGACATAGTTATGGTCCGTTTTGCTTACAAGAATTCAGATGAGTGTGTTCCTGTCGTGGTGAAACAGAAGGAAAAGAAAGAAGAAAAACATACGACTGATTCAGAAGCTATGGCGATTAAGGATGAACAGAACAAACAACCAACAACCCACAAGAACAGCGTCGTACGAGTGAGAAATTTGAGGAGATTGAACAAACAATCTTATTATATTACAACTATGGTGATTTTGATTCTGTTTTTGTTGAGTGTTTTTGGGAGATCAGTGACCATTTTGTGCACTTGTATTGCTTGGTATTTGATCCCTGTTTTGAAACAGAGTTCATCAAAATCAAGACGAAAGGAAAAGGTAAGGATTTTGATTCCAAATAAGATGGAAAAACACCCAGATGGATCCTCTGCTCTTTCTTCTCCAATTCAAGCTCATCGCAAAAGTGGGTGA

mRNA sequence

ATGGCTCTTCATGAATCAGTGTCCCCAAATTCCACTCCCAAAAAGTCCAGAAATGGACACAAAACCCACAACAAAGACAAGAAAAATCCTTACTCTGACCGTGGCCTCGACAAATTCTCTGCCCTTTTAACCGATCTTGATGAGAAAAGGAAGAAAATTTACTCTCGAGTTGACCCTGAAGACATAGTTATGGTCCGTTTTGCTTACAAGAATTCAGATGAGTGTGTTCCTGTCGTGGTGAAACAGAAGGAAAAGAAAGAAGAAAAACATACGACTGATTCAGAAGCTATGGCGATTAAGGATGAACAGAACAAACAACCAACAACCCACAAGAACAGCGTCGTACGAGTGAGAAATTTGAGGAGATTGAACAAACAATCTTATTATATTACAACTATGGTGATTTTGATTCTGTTTTTGTTGAGTGTTTTTGGGAGATCAGTGACCATTTTGTGCACTTGTATTGCTTGGTATTTGATCCCTGTTTTGAAACAGAGTTCATCAAAATCAAGACGAAAGGAAAAGGTAAGGATTTTGATTCCAAATAAGATGGAAAAACACCCAGATGGATCCTCTGCTCTTTCTTCTCCAATTCAAGCTCATCGCAAAAGTGGGTGA

Coding sequence (CDS)

ATGGCTCTTCATGAATCAGTGTCCCCAAATTCCACTCCCAAAAAGTCCAGAAATGGACACAAAACCCACAACAAAGACAAGAAAAATCCTTACTCTGACCGTGGCCTCGACAAATTCTCTGCCCTTTTAACCGATCTTGATGAGAAAAGGAAGAAAATTTACTCTCGAGTTGACCCTGAAGACATAGTTATGGTCCGTTTTGCTTACAAGAATTCAGATGAGTGTGTTCCTGTCGTGGTGAAACAGAAGGAAAAGAAAGAAGAAAAACATACGACTGATTCAGAAGCTATGGCGATTAAGGATGAACAGAACAAACAACCAACAACCCACAAGAACAGCGTCGTACGAGTGAGAAATTTGAGGAGATTGAACAAACAATCTTATTATATTACAACTATGGTGATTTTGATTCTGTTTTTGTTGAGTGTTTTTGGGAGATCAGTGACCATTTTGTGCACTTGTATTGCTTGGTATTTGATCCCTGTTTTGAAACAGAGTTCATCAAAATCAAGACGAAAGGAAAAGGTAAGGATTTTGATTCCAAATAAGATGGAAAAACACCCAGATGGATCCTCTGCTCTTTCTTCTCCAATTCAAGCTCATCGCAAAAGTGGGTGA

Protein sequence

MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPEDIVMVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTHKNSVVRVRNLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKVRILIPNKMEKHPDGSSALSSPIQAHRKSG
Homology
BLAST of Lsi04G014840 vs. ExPASy TrEMBL
Match: A0A0A0L2K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642550 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.4e-81
Identity = 173/212 (81.60%), Postives = 190/212 (89.62%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTT-DSEAMAI-KDEQNKQPTTHK--NSVVR 120
           +IVMVRFAYKNSDECVPVVVKQK+KKEEK+T+ DSE +AI K +Q+K+ T +K  N++VR
Sbjct: 61  EIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDDSETVAIKKPKQSKESTANKNNNNLVR 120

Query: 121 VRNLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKV 180
            RNLRRLNK SYYI  +VILILFLLS+FGRSVTILCTCIAWYL+PVLKQS SKSRRK KV
Sbjct: 121 ARNLRRLNKPSYYIAAVVILILFLLSIFGRSVTILCTCIAWYLVPVLKQSLSKSRRKGKV 180

Query: 181 RILIPNKMEKHPDGSSAL---SSPIQAHRKSG 206
           RI IPNKMEK P+ SS L   SSPIQAHRK+G
Sbjct: 181 RISIPNKMEKQPEASSVLSSSSSPIQAHRKTG 212

BLAST of Lsi04G014840 vs. ExPASy TrEMBL
Match: A0A5D3D9A0 (Putative ZCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002680 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.1e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTP+KSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPQKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAI-KDEQNKQPTTHK-NSVVRVR 120
           +IVMVRFAYKNSDECVPVVVKQK+KKEEK+T+DSEA AI K +Q+K+ TT+K N++VR R
Sbjct: 61  EIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDSEATAIKKPKQSKESTTNKNNNLVRAR 120

Query: 121 NLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKVRI 180
           NLRRLNK SYYI  +VIL+LFLLS+FGRSVTILCTCIAWYL+PVLKQS SKSRRK KVRI
Sbjct: 121 NLRRLNKPSYYIAAVVILVLFLLSIFGRSVTILCTCIAWYLVPVLKQSLSKSRRKGKVRI 180

Query: 181 LIPNKMEKHPDGSSAL---SSPIQAHRKSG 206
            + NKMEK P+ S+ L   SSP QAHRK+G
Sbjct: 181 SVSNKMEKQPEASAVLSSSSSPTQAHRKTG 210

BLAST of Lsi04G014840 vs. ExPASy TrEMBL
Match: A0A1S3BV47 (uncharacterized protein LOC103493605 OS=Cucumis melo OX=3656 GN=LOC103493605 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.1e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTP+KSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPQKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAI-KDEQNKQPTTHK-NSVVRVR 120
           +IVMVRFAYKNSDECVPVVVKQK+KKEEK+T+DSEA AI K +Q+K+ TT+K N++VR R
Sbjct: 61  EIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDSEATAIKKPKQSKESTTNKNNNLVRAR 120

Query: 121 NLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKVRI 180
           NLRRLNK SYYI  +VIL+LFLLS+FGRSVTILCTCIAWYL+PVLKQS SKSRRK KVRI
Sbjct: 121 NLRRLNKPSYYIAAVVILVLFLLSIFGRSVTILCTCIAWYLVPVLKQSLSKSRRKGKVRI 180

Query: 181 LIPNKMEKHPDGSSAL---SSPIQAHRKSG 206
            + NKMEK P+ S+ L   SSP QAHRK+G
Sbjct: 181 SVSNKMEKQPEASAVLSSSSSPTQAHRKTG 210

BLAST of Lsi04G014840 vs. ExPASy TrEMBL
Match: A0A6J1IHN8 (uncharacterized protein LOC111476372 OS=Cucurbita maxima OX=3661 GN=LOC111476372 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.2e-81
Identity = 170/209 (81.34%), Postives = 187/209 (89.47%), Query Frame = 0

Query: 4   HESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPEDIV 63
           HE VSPNSTPKKSRNG KTHN+DKKNPYSDRGLDKFSALLTDL+EKRKKIYS+ DPE+IV
Sbjct: 3   HELVSPNSTPKKSRNGLKTHNRDKKNPYSDRGLDKFSALLTDLEEKRKKIYSQTDPENIV 62

Query: 64  MVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTHKNS----VVRVRN 123
           MVRFAYKNS ECVPVVVKQK+KKE+KHTTDSEAMA + +QN++PTTHK+S     +R+RN
Sbjct: 63  MVRFAYKNSKECVPVVVKQKDKKEDKHTTDSEAMATRPQQNRRPTTHKHSDRKNSLRMRN 122

Query: 124 LRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSK----SRRKEK 183
           LRRL+K SYYIT MVILILFLLSVFGRSVTILCTCI WYLIPVLKQSSSK    +RRKE 
Sbjct: 123 LRRLSKPSYYITAMVILILFLLSVFGRSVTILCTCIVWYLIPVLKQSSSKYRPTTRRKEN 182

Query: 184 VRILIPNKMEKHPDGSSALSSPIQAHRKS 205
           VRI IPNKME HPDG SA+SSPI+AHRKS
Sbjct: 183 VRISIPNKME-HPDGISAVSSPIRAHRKS 210

BLAST of Lsi04G014840 vs. ExPASy TrEMBL
Match: A0A6J1F7X7 (uncharacterized protein LOC111442926 OS=Cucurbita moschata OX=3662 GN=LOC111442926 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 166/209 (79.43%), Postives = 185/209 (88.52%), Query Frame = 0

Query: 4   HESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPEDIV 63
           H+ VSPNSTPKKSR+G KTHN+DKKNPYSDRGLDKFSALLTDL++KRKKIYS+ DPE+IV
Sbjct: 3   HDLVSPNSTPKKSRDGLKTHNRDKKNPYSDRGLDKFSALLTDLEQKRKKIYSQTDPENIV 62

Query: 64  MVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTHKN----SVVRVRN 123
           M+RFAYKNS ECVPVVVKQK+KKE+KHTTDSEAMA + +QN +PTTHK+    S +RVRN
Sbjct: 63  MLRFAYKNSKECVPVVVKQKDKKEDKHTTDSEAMATRPQQNTRPTTHKHSDKKSSLRVRN 122

Query: 124 LRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSK----SRRKEK 183
           LRRL+K SYYIT MVILILFLLSVFGRSVTILCTC+ WYLIPVLKQSSSK    +RRKE 
Sbjct: 123 LRRLSKPSYYITAMVILILFLLSVFGRSVTILCTCVVWYLIPVLKQSSSKYRPTTRRKEN 182

Query: 184 VRILIPNKMEKHPDGSSALSSPIQAHRKS 205
           VRI IPNKME HPDG SA+SSPI AHRKS
Sbjct: 183 VRISIPNKME-HPDGISAVSSPIGAHRKS 210

BLAST of Lsi04G014840 vs. NCBI nr
Match: XP_038899146.1 (uncharacterized protein LOC120086521 [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91
Identity = 182/207 (87.92%), Postives = 196/207 (94.69%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTH--KNSVVRVR 120
           DIVMVRFAYKNSDECVPVVVKQK+KKE+K++ DS+AMAIK +QNKQ TTH  KN++VR R
Sbjct: 61  DIVMVRFAYKNSDECVPVVVKQKDKKEDKNSNDSDAMAIKSQQNKQLTTHKNKNNLVRAR 120

Query: 121 NLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKVRI 180
           NLRRL+K SYYI  +VILILFLLSVFGRSVTILCTCIAWYL+PVLKQSSSKSRRKEKVRI
Sbjct: 121 NLRRLSKPSYYIAAIVILILFLLSVFGRSVTILCTCIAWYLVPVLKQSSSKSRRKEKVRI 180

Query: 181 LIPNKMEKHPDGSSALSSPIQAHRKSG 206
           L+PNKMEK PDGSSALSSPIQAHR+SG
Sbjct: 181 LVPNKMEKQPDGSSALSSPIQAHRRSG 207

BLAST of Lsi04G014840 vs. NCBI nr
Match: XP_011654153.1 (uncharacterized protein LOC105435310 [Cucumis sativus] >KGN55274.1 hypothetical protein Csa_012419 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 5.0e-81
Identity = 173/212 (81.60%), Postives = 190/212 (89.62%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTT-DSEAMAI-KDEQNKQPTTHK--NSVVR 120
           +IVMVRFAYKNSDECVPVVVKQK+KKEEK+T+ DSE +AI K +Q+K+ T +K  N++VR
Sbjct: 61  EIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDDSETVAIKKPKQSKESTANKNNNNLVR 120

Query: 121 VRNLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKV 180
            RNLRRLNK SYYI  +VILILFLLS+FGRSVTILCTCIAWYL+PVLKQS SKSRRK KV
Sbjct: 121 ARNLRRLNKPSYYIAAVVILILFLLSIFGRSVTILCTCIAWYLVPVLKQSLSKSRRKGKV 180

Query: 181 RILIPNKMEKHPDGSSAL---SSPIQAHRKSG 206
           RI IPNKMEK P+ SS L   SSPIQAHRK+G
Sbjct: 181 RISIPNKMEKQPEASSVLSSSSSPIQAHRKTG 212

BLAST of Lsi04G014840 vs. NCBI nr
Match: XP_008452646.1 (PREDICTED: uncharacterized protein LOC103493605 [Cucumis melo] >KAA0064447.1 putative ZCF37 [Cucumis melo var. makuwa] >TYK20142.1 putative ZCF37 [Cucumis melo var. makuwa])

HSP 1 Score: 310.8 bits (795), Expect = 8.5e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MALHESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPE 60
           MALHESVSPNSTP+KSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS+ DPE
Sbjct: 1   MALHESVSPNSTPQKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSQTDPE 60

Query: 61  DIVMVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAI-KDEQNKQPTTHK-NSVVRVR 120
           +IVMVRFAYKNSDECVPVVVKQK+KKEEK+T+DSEA AI K +Q+K+ TT+K N++VR R
Sbjct: 61  EIVMVRFAYKNSDECVPVVVKQKDKKEEKNTSDSEATAIKKPKQSKESTTNKNNNLVRAR 120

Query: 121 NLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSKSRRKEKVRI 180
           NLRRLNK SYYI  +VIL+LFLLS+FGRSVTILCTCIAWYL+PVLKQS SKSRRK KVRI
Sbjct: 121 NLRRLNKPSYYIAAVVILVLFLLSIFGRSVTILCTCIAWYLVPVLKQSLSKSRRKGKVRI 180

Query: 181 LIPNKMEKHPDGSSAL---SSPIQAHRKSG 206
            + NKMEK P+ S+ L   SSP QAHRK+G
Sbjct: 181 SVSNKMEKQPEASAVLSSSSSPTQAHRKTG 210

BLAST of Lsi04G014840 vs. NCBI nr
Match: XP_022975775.1 (uncharacterized protein LOC111476372 [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-80
Identity = 170/209 (81.34%), Postives = 187/209 (89.47%), Query Frame = 0

Query: 4   HESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPEDIV 63
           HE VSPNSTPKKSRNG KTHN+DKKNPYSDRGLDKFSALLTDL+EKRKKIYS+ DPE+IV
Sbjct: 3   HELVSPNSTPKKSRNGLKTHNRDKKNPYSDRGLDKFSALLTDLEEKRKKIYSQTDPENIV 62

Query: 64  MVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTHKNS----VVRVRN 123
           MVRFAYKNS ECVPVVVKQK+KKE+KHTTDSEAMA + +QN++PTTHK+S     +R+RN
Sbjct: 63  MVRFAYKNSKECVPVVVKQKDKKEDKHTTDSEAMATRPQQNRRPTTHKHSDRKNSLRMRN 122

Query: 124 LRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSK----SRRKEK 183
           LRRL+K SYYIT MVILILFLLSVFGRSVTILCTCI WYLIPVLKQSSSK    +RRKE 
Sbjct: 123 LRRLSKPSYYITAMVILILFLLSVFGRSVTILCTCIVWYLIPVLKQSSSKYRPTTRRKEN 182

Query: 184 VRILIPNKMEKHPDGSSALSSPIQAHRKS 205
           VRI IPNKME HPDG SA+SSPI+AHRKS
Sbjct: 183 VRISIPNKME-HPDGISAVSSPIRAHRKS 210

BLAST of Lsi04G014840 vs. NCBI nr
Match: XP_023536130.1 (uncharacterized protein LOC111797376 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 3.6e-79
Identity = 167/209 (79.90%), Postives = 186/209 (89.00%), Query Frame = 0

Query: 4   HESVSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYSRVDPEDIV 63
           H+ VSPNSTPKKSRNG KTHN+DKKNPYSDRGLDKFSALLTDL++KRKKIYS+ DPE+IV
Sbjct: 3   HDLVSPNSTPKKSRNGLKTHNRDKKNPYSDRGLDKFSALLTDLEQKRKKIYSQTDPENIV 62

Query: 64  MVRFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKDEQNKQPTTHKN----SVVRVRN 123
           M+RFAYKNS ECVPVVVKQK+KKE+KHTTDSEAMA + +QN +PTTHK+    S +RVRN
Sbjct: 63  MLRFAYKNSKECVPVVVKQKDKKEDKHTTDSEAMATRPQQNTRPTTHKHSDKKSSLRVRN 122

Query: 124 LRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSSSK----SRRKEK 183
           LRRL+K SYYIT MVILILFLLSVFGRSVTI+CTCI WYLIPVLKQSSSK    +RRKE 
Sbjct: 123 LRRLSKPSYYITAMVILILFLLSVFGRSVTIMCTCIVWYLIPVLKQSSSKYRPTTRRKEN 182

Query: 184 VRILIPNKMEKHPDGSSALSSPIQAHRKS 205
           VRI IPNKME HPDG SA+SSPI+AHRKS
Sbjct: 183 VRISIPNKME-HPDGISAVSSPIRAHRKS 210

BLAST of Lsi04G014840 vs. TAIR 10
Match: AT1G59590.1 (ZCF37 )

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-25
Identity = 77/172 (44.77%), Postives = 107/172 (62.21%), Query Frame = 0

Query: 8   SPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS-RVDPEDIVMVR 67
           SP S+PKKSR       K  KNPYS+RGLDKFS LL++LDEKR+ IYS ++D     +VR
Sbjct: 7   SPCSSPKKSR-------KASKNPYSNRGLDKFSELLSELDEKRQSIYSKKLDSGGPPLVR 66

Query: 68  FAYKNSDECVPVVVKQKE-KKEEKHTTDSEAMAIKDE---------QNKQP-TTHKNSVV 127
           F + +S ECVPVV++     K+ K T D  A  +K E         +N +P T  K S V
Sbjct: 67  FVFTSSGECVPVVIRSSYLHKKNKKTKDVVADKVKTEVKEAKTEEIKNTEPETEQKQSCV 126

Query: 128 RVRNLRRLNKQSYYITTMVILILFLLSVFGRSVTILCTCIAWYLIPVLKQSS 168
              NL+++ +  +++   VIL+L  L+ FGRSV I+ TCIAWYL+P +++ S
Sbjct: 127 INENLKKIARPDHFLPVTVILVLVFLAFFGRSVAIMFTCIAWYLVPTIQEQS 171

BLAST of Lsi04G014840 vs. TAIR 10
Match: AT1G10220.1 (BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 0

Query: 7   VSPNSTPKKSRNGHKTHNKDKKNPYSDRGLDKFSALLTDLDEKRKKIYS-RVDPEDIVMV 66
           +SP S+P++SR G    NK+ KNPYS++GLDKFSALL++LDEKR+ IY+ R+DP+   +V
Sbjct: 2   LSPFSSPRRSRRG----NKESKNPYSNQGLDKFSALLSELDEKRQSIYAKRLDPDGPPLV 61

Query: 67  RFAYKNSDECVPVVVKQKEKKEEKHTTDSEAMAIKD------------------------ 126
           RF + +S ECVPV++K K   ++K   D   +  KD                        
Sbjct: 62  RFVFTSSGECVPVMIKTKRASQKKDVLDDFKVKKKDVLDDFKVKNKDVLDDFNVKTESKT 121

Query: 127 EQNKQ------PTTHKNSVVRVRNLRRLNKQSYYITTMVILIL 139
           EQ K+       T  K S V   NL+++++ ++ +   V+L++
Sbjct: 122 EQEKEIKQTDLETEQKQSCVLNENLKKISRPNHLLPVTVVLLM 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2K92.4e-8181.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642550 PE=4 SV=1[more]
A0A5D3D9A04.1e-8180.48Putative ZCF37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00268... [more]
A0A1S3BV474.1e-8180.48uncharacterized protein LOC103493605 OS=Cucumis melo OX=3656 GN=LOC103493605 PE=... [more]
A0A6J1IHN89.2e-8181.34uncharacterized protein LOC111476372 OS=Cucurbita maxima OX=3661 GN=LOC111476372... [more]
A0A6J1F7X71.1e-7879.43uncharacterized protein LOC111442926 OS=Cucurbita moschata OX=3662 GN=LOC1114429... [more]
Match NameE-valueIdentityDescription
XP_038899146.14.1e-9187.92uncharacterized protein LOC120086521 [Benincasa hispida][more]
XP_011654153.15.0e-8181.60uncharacterized protein LOC105435310 [Cucumis sativus] >KGN55274.1 hypothetical ... [more]
XP_008452646.18.5e-8180.48PREDICTED: uncharacterized protein LOC103493605 [Cucumis melo] >KAA0064447.1 put... [more]
XP_022975775.11.9e-8081.34uncharacterized protein LOC111476372 [Cucurbita maxima][more]
XP_023536130.13.6e-7979.90uncharacterized protein LOC111797376 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G59590.11.4e-2544.77ZCF37 [more]
AT1G10220.11.2e-1636.20BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1); Has 43 Bla... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR35275ZCF37coord: 5..186
NoneNo IPR availablePANTHERPTHR35275:SF1ZCF37coord: 5..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G014840.1Lsi04G014840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane