Lsi04G014800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G014800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Location	chr04: 22513150 .. 22514145 (-)
RNA-Seq Expression	Lsi04G014800
Synteny	Lsi04G014800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTTGATTTTCCCAGAATGTATCCCAATTTTTGCCAAATTCTTCTGATGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTTGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACTCATCTTTTCGACTGGGAAATTTCCAAATTTATTAAACTGAAAGGCAATTTCAACGAAATCTTTCAATTTCTTATTTGACTATGTTCAACTCTATGTATTCCTCGAGACGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCGACTAACGGAGGAATGTTTTTATGCTGTGAAAATTAGTTAATAACGAGCTTTCTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTGAATGCTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCGACGAAAATAGTAAATGGTCCTCTCAATACACAAATGTCTCACTCCCCAGGAATTTCAATTGCGCAACTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGTTCGTTCGATAAATTCCTGCCTTTCTATCGAGATCTGAGATGTTTGGATTTTTCAAAACTTCATGGACATGCAGAAGAGAAAGACGAGACCCACTCGTCGGACCAAGACATAACTTTGACTTGTTCAAATAACAAACAATTAAGGTGAAGCAGGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTGGAATTCTCGATGTAGATGCTACATAG

mRNA sequence

ATGGAACTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGTTCTTCTATTCTGGTGAATGCTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCGACGAAAATAGTAAATGGTCCTCTCAATACACAAATGTCTCACTCCCCAGGAATTTCAATTGCGCAACTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTGGAATTCTCGATGTAGATGCTACATAG

Coding sequence (CDS)

ATGGAACTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGTTCTTCTATTCTGGTGAATGCTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCGACGAAAATAGTAAATGGTCCTCTCAATACACAAATGTCTCACTCCCCAGGAATTTCAATTGCGCAACTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGGTCAGGAACAACGAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTGGAATTCTCGATGTAGATGCTACATAG

Protein sequence

MELQNVSVYAPTYYLDIPRKMYGLMRLLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

Homology

[Close]

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot
Match: P0CC48 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Coffea arabica OX=13443 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-18
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR 107
           +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGVR
Sbjct: 213 EIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGVR 261

[Close]

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot
Match: P0CC49 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Coffea arabica OX=13443 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-18
Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR 107
           +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGVR
Sbjct: 213 EIVNGLINTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEGVR 261

[Close]

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot
Match: P0CC78 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA LFITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALLFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEG 105
           FKLSPAPSHQWTPDVYEG
Sbjct: 253 FKLSPAPSHQWTPDVYEG 259

[Close]

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot
Match: P0CC79 (NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhB2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 46/78 (58.97%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA LFITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALLFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEG 105
           FKLSPAPSHQWTPDVYEG
Sbjct: 253 FKLSPAPSHQWTPDVYEG 259

[Close]

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot
Match: P0CC50 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhB1 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-17
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG 105
           +IVNG LNTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEG
Sbjct: 213 EIVNGLLNTQMYNSPGISIALIFITVGIGFKLSPAPSHQWTPDVYEG 259

[Close]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL
Match: A0A6A5L7K0 (Proton_antipo_M domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00043434 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA +FIT+GIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ
Sbjct: 226 EIVNGLINTQMYNSPGISIALIFITIGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 285

Query: 118 IHFASSLLRVVPTKDRTNDVYNT 141
           IHF+SSLLRVVPTKDRTNDVYNT
Sbjct: 286 IHFSSSLLRVVPTKDRTNDVYNT 308

[Close]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL
Match: A0A6A5LV56 (Proton_antipo_M domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_00043064 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.0e-34
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA  FIT+GIGFKLSP PSHQWTP +YEGVR +NN+SLYDK 
Sbjct: 71  EIVNGLINTQMYNSPGISIALRFITIGIGFKLSPTPSHQWTPGIYEGVRFKNNKSLYDKH 130

Query: 118 IHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
           IHF+SSLL VVPTKDRTNDVYNT ILD DAT
Sbjct: 131 IHFSSSLLWVVPTKDRTNDVYNTSILDEDAT 161

[Close]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL
Match: A0A0D3CHF2 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEGVRVRNNESLYDK+
Sbjct: 28  EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGVRVRNNESLYDKR 87

Query: 118 IHFASSLLRVVPTKDRTNDVY 139
           IHFAS LLRVVPTKDRTNDVY
Sbjct: 88  IHFASLLLRVVPTKDRTNDVY 108

[Close]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL
Match: A0A291LRH6 (NADH-plastoquinone oxidoreductase subunit 2 OS=Plukenetia volubilis OX=316893 GN=ndhB PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 87/171 (50.88%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALIFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEGV----------------------------------------- 146
           FKLSPAPSHQWTPDVYEGV                                         
Sbjct: 253 FKLSPAPSHQWTPDVYEGVRFVRKIPTSLSISEMLGFFKTPWTCRREMLSPLGPRHNFYL 312

Query: 147 --------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
                   RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT ILDVDAT
Sbjct: 313 FKEQLRGSRVRNNESLYDKQIHFASSLLRVAPTKDRTNDVYNTQILDVDAT 352

[Close]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL
Match: A0A291LRP4 (NADH-plastoquinone oxidoreductase subunit 2 OS=Plukenetia volubilis OX=316893 GN=ndhB PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32
Identity = 86/171 (50.29%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALIFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEGV----------------------------------------- 146
           FKLSPAPSHQWTPDVYEGV                                         
Sbjct: 253 FKLSPAPSHQWTPDVYEGVRFVRKIPTSLSISEMLGFFKTPWTCRREMLSPLGPRHNFYL 312

Query: 147 --------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
                   RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT +LDVDAT
Sbjct: 313 FKWQLRWGRVRNNESLYDKQIHFASSLLRVAPTKDRTNDVYNTWVLDVDAT 352

[Close]

BLAST of Lsi04G014800 vs. NCBI nr
Match: KAF1855485.1 (hypothetical protein Lal_00044209 [Lupinus albus] >KAF1876795.1 hypothetical protein Lal_00043434 [Lupinus albus])

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-35
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA +FIT+GIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ
Sbjct: 226 EIVNGLINTQMYNSPGISIALIFITIGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 285

Query: 118 IHFASSLLRVVPTKDRTNDVYNT 141
           IHF+SSLLRVVPTKDRTNDVYNT
Sbjct: 286 IHFSSSLLRVVPTKDRTNDVYNT 308

[Close]

BLAST of Lsi04G014800 vs. NCBI nr
Match: KAF1866111.1 (hypothetical protein Lal_00043064 [Lupinus albus])

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-33
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA  FIT+GIGFKLSP PSHQWTP +YEGVR +NN+SLYDK 
Sbjct: 71  EIVNGLINTQMYNSPGISIALRFITIGIGFKLSPTPSHQWTPGIYEGVRFKNNKSLYDKH 130

Query: 118 IHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
           IHF+SSLL VVPTKDRTNDVYNT ILD DAT
Sbjct: 131 IHFSSSLLWVVPTKDRTNDVYNTSILDEDAT 161

[Close]

BLAST of Lsi04G014800 vs. NCBI nr
Match: KAG5383810.1 (hypothetical protein IGI04_035280 [Brassica rapa subsp. trilocularis] >KAG5383819.1 hypothetical protein IGI04_035289 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 148.7 bits (374), Expect = 4.0e-32
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQ 117
           +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEGVRVRNNESLYDK+
Sbjct: 28  EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGVRVRNNESLYDKR 87

Query: 118 IHFASSLLRVVPTKDRTNDVY 139
           IHFAS LLRVVPTKDRTNDVY
Sbjct: 88  IHFASLLLRVVPTKDRTNDVY 108

[Close]

BLAST of Lsi04G014800 vs. NCBI nr
Match: ATI24814.1 (NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis])

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-32
Identity = 87/171 (50.88%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALIFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEGV----------------------------------------- 146
           FKLSPAPSHQWTPDVYEGV                                         
Sbjct: 253 FKLSPAPSHQWTPDVYEGVRFVRKIPTSLSISEMLGFFKTPWTCRREMLSPLGPRHNFYL 312

Query: 147 --------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
                   RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT ILDVDAT
Sbjct: 313 FKEQLRGSRVRNNESLYDKQIHFASSLLRVAPTKDRTNDVYNTQILDVDAT 352

[Close]

BLAST of Lsi04G014800 vs. NCBI nr
Match: ATI24797.1 (NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis])

HSP 1 Score: 147.9 bits (372), Expect = 6.9e-32
Identity = 86/171 (50.29%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 27  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIG 86
           +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIG
Sbjct: 193 ILVHAFSWLYGSS-----------GGEIELQEIVNGLINTQMYNSPGISIALIFITVGIG 252

Query: 87  FKLSPAPSHQWTPDVYEGV----------------------------------------- 146
           FKLSPAPSHQWTPDVYEGV                                         
Sbjct: 253 FKLSPAPSHQWTPDVYEGVRFVRKIPTSLSISEMLGFFKTPWTCRREMLSPLGPRHNFYL 312

Query: 147 --------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT 149
                   RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT +LDVDAT
Sbjct: 313 FKWQLRWGRVRNNESLYDKQIHFASSLLRVAPTKDRTNDVYNTWVLDVDAT 352

[Close]

BLAST of Lsi04G014800 vs. TAIR 10
Match: ATCG00890.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG 105
           +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEG
Sbjct: 90  EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEG 136

[Close]

BLAST of Lsi04G014800 vs. TAIR 10
Match: ATCG01250.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.1e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0


Query: 58  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG 105
           +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEG
Sbjct: 90  EIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEG 136

[Close]

BLAST of Lsi04G014800 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A )

HSP 1 Score: 41.6 bits (96), Expect = 6.5e-04
Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 0


Query: 69  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG 105
           + S GI +  L I VG  FK++  P H W PD+YEG
Sbjct: 221 ARSSGIFMGILSIAVGFLFKITAVPFHMWAPDIYEG 256

[Close]

BLAST of Lsi04G014800 vs. TAIR 10
Match: ATMG01320.1 (NADH dehydrogenase 2B )

HSP 1 Score: 41.6 bits (96), Expect = 6.5e-04
Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 0


Query: 69  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG 105
           + S GI +  L I VG  FK++  P H W PD+YEG
Sbjct: 221 ARSSGIFMGILSIAVGFLFKITAVPFHMWAPDIYEG 256

The following BLAST results are available for this feature:

BLAST of Lsi04G014800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CC48	4.5e-18	85.71	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Coffea arabica OX=1...	[more]
P0CC49	4.5e-18	85.71	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Coffea arabica OX=1...	[more]
P0CC78	2.2e-17	58.97	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Jasminum nudiflorum...	[more]
P0CC79	2.2e-17	58.97	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Jasminum nudiflorum...	[more]
P0CC50	2.9e-17	87.23	NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus OX=...	[more]

BLAST of Lsi04G014800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5L7K0	1.4e-35	89.16	Proton_antipo_M domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_000434...	[more]
A0A6A5LV56	8.0e-34	79.12	Proton_antipo_M domain-containing protein OS=Lupinus albus OX=3870 GN=Lal_000430...	[more]
A0A0D3CHF2	2.0e-32	87.65	Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1	[more]
A0A291LRH6	2.6e-32	50.88	NADH-plastoquinone oxidoreductase subunit 2 OS=Plukenetia volubilis OX=316893 GN...	[more]
A0A291LRP4	3.3e-32	50.29	NADH-plastoquinone oxidoreductase subunit 2 OS=Plukenetia volubilis OX=316893 GN...	[more]

BLAST of Lsi04G014800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1855485.1	3.0e-35	89.16	hypothetical protein Lal_00044209 [Lupinus albus] >KAF1876795.1 hypothetical pro...	[more]
KAF1866111.1	1.6e-33	79.12	hypothetical protein Lal_00043064 [Lupinus albus]	[more]
KAG5383810.1	4.0e-32	87.65	hypothetical protein IGI04_035280 [Brassica rapa subsp. trilocularis] >KAG538381...	[more]
ATI24814.1	5.3e-32	50.88	NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis]	[more]
ATI24797.1	6.9e-32	50.29	NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis]	[more]

BLAST of Lsi04G014800 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00890.1	5.1e-17	82.98	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01250.1	5.1e-17	82.98	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATMG00285.1	6.5e-04	47.22	NADH dehydrogenase 2A	[more]
ATMG01320.1	6.5e-04	47.22	NADH dehydrogenase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 57..104 e-value: 8.8E-7 score: 28.4
None	No IPR available	PANTHER	PTHR45564	FAMILY NOT NAMED	coord: 58..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014800.1	Lsi04G014800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity