Lsi04G014330 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G014330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Histone deacetylase
Location	chr04: 22064089 .. 22076570 (+)
RNA-Seq Expression	Lsi04G014330
Synteny	Lsi04G014330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCGGAAGCAGTTTATGATGTTGAACTTATCAGTTCTTCGCAGAGCATAAAACATGAATTTTGGCCTCTAGATCCAATTGATCCGGTTCAAGCAAAGTTCCCGTGCTGTTTGGTTTGGACTCCTCTTCCTGTTGTCTCTTGGTTGGCACCTTTCATTGGCCATGTTGGGATTTGCAGGGAGGATGGAATCATTTTAGATTTCGCAGGATCGAATTTTGTGAATACCAATGATTTTGCATTTGGTTCTGTTGCAAGATACCATCAACTCGACAGAGAAAAAGTAAGTTCATAGTAATCAGTTTACATAAATATTTCATGAAATTGGTTGCCATGTTTCCTAACAAGAAAGCATGCTGTCTGAAGTACATAAATTTCACTAGAAAGTTTAATGGAACTTATGTGCGTTTCTTACTCGTGTGATGTACCAACCAGGAGGAATATTATTCACTTACAGAAATGCAGTACATTTTACTGAAACTATCTACTGTTTCCATGTTAGCTATCTCTCTTGGGTGTAATGCCATCTTCTTTCAAAGATGGCTATCATACTCTCTCTTACTAGTTCTTTTCTCTGCAAACAGTGTAAAATTGTTTGATGGATCATTAACAGTGTATTGGAACCTTATGTCTTTTGCAGTGTTGCTTCCCCACGAGCTTAGCTGCACATAAATGTAAGCAGGGCTACCAGCATTCAGAGTATGGAACTGCCATTACCTGGGACGATGGCCTCCAATCAAGTACACGGTATTTCGAGCATAAATCGTACAACCTTTTTACATGCAACTGCCATTCCTTTATTGCCAATTGTCTGAACCGTCTTTGTTACGATGGATCAATGAGTTGGAACATGATAAATGTAGCAGCTCTAATTCTGTTCAAGGGACATTGGGTTAATGGCATGTCAATTGTAAGATCATTCCTTCCCTTTATACTGGTGGTCTGCCTGGGCATTGCCATGGTTGGATGGCCCTTCTTGATTGGTCTGTTTTCGCTTCCTCTCCTTTTGGTTGGTTGGTTTGTTCTGGGTACTTACTGTATAAAAAGCCTGTTGGAATGTTAGATTTGGTTGAACATTTGCAGTTGAGAAATCACTGAGTGATTGTTCTCTATCCATTCTTGCTTGCAACTTGGAGAGAGTATTTGTTTATATAGTTGAACTTTGGACTAAGAGCAACATTGAGTTTCATATAATGTATAGAAAGGTACTATTTTGATTATTTTGAAAGCTTCAGGTTCTGGTGGATAACAATTTTATTTTTAGTTCTGTTTTTTAAATTTATGTTGGGTTATTCCTAATCTTTTTTTACTATGGTTTTCACTTATGTTACCAAAACACTACTTGAATTCCTAATCTAGTTATCTAGTTATAAAAACAAAAGACATTATTTTTTCAGTTTTATTTTAAAAAGAATAACTTAGTGTATGAAAACTTGGATAGAAAATATATTAGTAGAAGTAGTGTTTATAAGTTCAATTTTTTAAAAACTAAAAATAAAAGAATTTAGGCTCTATTTGATAACCCTTTGGTTTTTGAAAATTAAACCTATAAACTCTCCTTCCATTCTTAAGGATTTGTTTGGATTGACTTTCTAAATGTTTAAATTAGTACTTGTAAAAAAAGTGTTTATAAACACTTAGAAAATCAATCCAAACGGTCATAAATTTATGGCTTCTCATCTACTTTTTACCATTGTTTTAAAAAATTAGGCTAAATTTTGAAAACTAAAAAAAGTAGTTTTTAAAAATTTGTTTTTGTTTTTTAAATTTAGCTAAGATTATAACTCTTGTACTCTAAGTAAAATGTTGGAAAAAAGAGGCTTAATTTTTAAAAACGAAATGGTTATTAAATGAGGTATAAATGGTTATGAAAGAGGGTCTTATCTATTTTAAGAGAATTGAAAATGATTTAGTTAGAGTTTTTCTCATTGGCTCATGTTCGTATTTCTATAATATAGTATAATACAATAGTACTTTCATAAGTTAGAGTTTTTCCTTCATTACTCTCTTATGTTTGCACTCCTTGCTGCTCTCTCTCTCTCTCGATACTCTTCACTCTATCACTTTTGCTCGTTTTCTTTTTTAAACTTTCATTAATTGATGCGCTAGGTGCAAGACATAGTTCTGTGACAATATATTTTTATTAAAAAACTAGGGAAAATGCCATTACAATCCAAAATCCGAAATTTGGAGTGATTTTTATGAAAACTCCATTTTTTCTTTCAACAATTTCACTTAAATAAACGTCATTTAGGATTAACTCAATGATAAGCCAACCAAATCAGGGTCGATTTAAATTAATGATATTTAACGTTTGCAAGATAATGATAACCTAATTTTGAAAAAGGTGATTGATATTCAATGTAATGAATAAATTAGTTATATTAGGTTAGTTGTTCAAACGTTCACTTTAAGCCAAGTTTAATCAAATTTGTAGTGGACTTGGGCTAACCTTTGAACTTCCGGCATGTAATGAGGGTGAAGTAGAGCAACAAAAATAACCGTATATTGTCAAATGCAGTAAAGTGCGTTCTCGATGGTCTCACGGCAACAAATCACTGATAACCGTCCGATTGGTCACCGGCGAAAATGTTCTATCCCTCAGACCGATTGAACATCCCAATCTCAGCTGATTTCGCCTCGAAAATTCCAAAGAAAATCCTGTATCCGAATGGACCCAATCTATACTTGGTTCGATCAAATCCAAGTCATCGATCCCTAGTCATACGGATTCACCGCCCCAGAATCCCAACTCTAACCGACCCACCTACGAACTTTCGCAGCTGATCATTTACACGTTTCCAACTGTGGCCACAATCCAGCTCTCTCGGCCATTCTTTTGCTCTGTTTTCTGCTATTCCAATTTCTTCACTCGGGGCATGTCCTCTTCGCCGTCTCCGAATGCGAACGATGAGGAAGCTGTTCGAAGGAACCGAATTCTCTCCAGCAAGCTGTATTTTGATGTTCCTTCTTCAAAGGTACTGGAGTAAAGTTCGGTTAATCTCAGTTTGCATGTAAGCTGATTCCAGGTGTCGTATGTACTCATGTGTATTTCTGGATTTGGGTGAAAACAGGTTCCGGTGATATATTCCTCATTGTACGACATCTCATTTCTTGGAATAGAGAAGTTGTAAGTAACTGGTGCTTTATTTTAGTTCATATTCTTAAGAACTCTTTCATCGTGACGTTTTGATAGATAGTTAGATATCTCTTGTTTGTTCCATCTCTTTCCTGTTTTGTTTGTGTTCTCAATCATGCGATATTCAGAATTCATGGGGAGTCCGTTCGGTTTCTTCACAATTTTAACATTCTATTGTTCTAAGTCGGTAAGTTTTTACTTGGAAATCATATCTGTAGGCATCCATTTGATTCGAAGAAATGGGGTCGTGTATGCCAATTCCTTATTGCGGCTGGAGTTCTAAGGAAAGATCAAATCATCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTGGTGTGTTTTTAGATTCCACCTTTTCTGTTAACTTTATGTACACGTGCTATTAGTAGTTTGGTACATTCGCGCTCTCCCTCCGTCTTTTTCTCCATGAATTCTCAAATTGCAAAAACCACGAACCTGTAGTACAACTGCTTATTTGAAGTATAATTGAAAAGGCCTATCTTGGTAATTGTCATTCATGTGAGAAGACTAAACTAACTTATTCACGAATTTTAGTAATTTGACAATGAAACATGTCACTGGTAATATTTGACCAGGTACATCCGGAATCATACTTGAATAGTCTGAAGAACAGTTCGAATGTTGCTAAGATTATTGAGGTATTGCAGCATATCCTCTTGCTTTGTGAGTCATCTTGTTGCCTTGACCTATAATTTGGTTTAGTTAAACATTATCCGCCGTGAAGGTAACTAGTTACTCGTTAATTTTGTTTATAATTTTAAGTTCAAGTCCCTTTTTCAAAGACATGGTGAGAATTGTAATATATGAAAGCCTCAGATGTTTCATTTTTAAAAGGTTGAATATGCGTTGAGTTGTATTATTTTTCCCTTTCCTAGATTCAATTTCTGGTTGTAATCTTTTCAATTTTGATAGATCTGAACTACTACAATATAGGTCCCTCCTGTTGCATTGTTTCCTCACTGTCTTGTTAAGGAGAAAGTTCAACGTCCATTTCGTAACCAGGTGGATTAGATGGTTCATCTCAAATTATTCTCCTCTCCCTTCTTTCATGTCAAATTTAAAATGGCTCGTAATTGTTGTGTGCTGCTGCAGGTTGGAGGGAGCATATTAGCTGGAAAAATAGCAAAAGAGAGAGGATGGGCCATCAATGTAGGAGGTGGTTTTCACCATTGTTCAGCAGAACAAGGAGGGGGATTTTGTGTGTATGCAGATATTTCTCTGTGTATACACTACGCCTTTGTTCAGCTAAATATATCAAGGTATACTGTGCATAAACTTGCACCACGATGGCTTAAAGGAACTCATACAGTGTTGAGTTTTGTTGAATAGCAAGTACTTGTGGTAATTAAGCCTTATCCTAGCGATATTCAACATTTTCAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGTATGGCAATTTATTTTTCCAGTAATAGCTTTTAATTGGTTCTCTTCTGGAATGCTAACGGGTTTATCTATACTAGCAGGACGAGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTGTAAGTTACTCTGATATTCCATGCACCATCTCTGGATGAAATTATTGATTCTGCTGTTGTGTTTGCCCTCTTGTTAGTCTTTTTAAGTGATGCCAATTTTCTATTTCCATCTCATTTTCAAAGTCCCTATCACCATTTTAATTGAGCATAGAAATTTTGTTTGACTCTCTCTCTCTGTATGTTTGCGTATGTTAGGATTATGAGGCTAGAAGATGCGTTGATCAGAAAGTTGAAGTAGTTGTAAGTAATGCTTGTTATGGAAATAGATTCTGTTTGTTTCTCTTTTTGCCCGCATGTTTCATGGATACATTTTCTCATGCAGAGTGGGACCACAACAAGTGAATACTTGAAGAAATTAGATGAAGCACTCGAGGTAGGGTAGCTTTCCTTAAATTCATTTGTTAATGTAATTGTTTATCGATTACCTTTGTTTATTTTTAAAATTTTCTTTCAATGAAAGTTCGGTTTATTGTAACTAAAAAAAAATTATATTACTTCATTGTTTCAAAATATTGAAACTTCTCTTAGCCTTTTACCCTTTGAGGGTTTCAAGTTTTGGGAAAGAGCGATTTATTTGTTTGTCAAGTCTCTGCTAATTTTCACCATGTTAATGGTAGGTTGCTGCCAGTTCATATGATCCAGAATTAATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTAGGCTTGTTAAAGGTAACTATGTCTTCCCCCACATTAGTTCTGCAAGAATTTGATTCCTCCTTTCTCACTTTCTGGTTAGGGCAAAAAGTTTGTCGGTTGTCGTGTTGGATTATATACACACTGATTTGCAGATTAGTGCTGAGGGAATAGCCAAGAGAGATGAAAAGGTTTTCAGATTTGCCTGTGCGAGGAACATTCCCATTGTGATGCTGACGTCAGGTCTTTTCCCCTAACATGAATATGTCAATGAAGTTTATTGAATATGCTCCTTTTTTATTATGCTTGACCCTTCTCTCTTGTAAAATATAAAAAGTACACCCATCCATCCTTTTTATTTAATACTAACTTTTAACTCTTTGACCAAGTGGTAAAATATCTAATTGGACCCTTTTTAATTTCATATGTATATAATTATTATATACCTTTTTTATTTAGAAGTCTCTCTTATCAAAACTGACTTTACATCTTTCTCATTTTTATTCAACTTCAATTCTTAATATTACGTTTATCCCTCAGCATAGATGTCTCTCTTAAATCATAACTTTTGGTGGTATCTTGAGATTTAAATGACTAAGAGTTTGAATATTACATTTATTGTCAACGAAATTATTTTCTTGCCAACTATAAAATATTTCTTGGTAGTATGAAATTTTATCTCGATAATGGGAAAAAAGTATCTCATGAAGAGAAGTTCTTGTCAATAGGGAAAAAAAATCCTGGAAAAAGATAAGAAATTTGTACCCAAAACCTTATGTGATTGGTAGAAAATAGAGACATTATGGAATGATGAGAGATTGCTCAAATAACAGGGTACTTTTGCCATTTCAGACCACTTCAATCAATCAACTTTATGTTTTGCTGACTCCATTGTACTCTTGGAGTAATGTTTATTAATCGATGATTTTCAAATTCAACTTTCAGGCGGTTACATGAAATCTAGCGCTAAAGTCATTGCTGATTCAATTGAAAATCTCTCCAAGCGAAGTTTAATCGATACAGAAAGCTCTACAGGCAGAATGTAGTCACCGAGTGAGCTACTTTGTATTCCTGTCTTATTAAGTCAGTAGCATGAACCATTTGGCACGGCTTTACTTTAATCACATGACTTGTATGAATATGTATATAGTTGGAGCAGAACTGTGTTCCAGTATTGTGGCATGAAAGAGATGCATTATTGTGGCGTACACTTTGGTACTTATTTGTTAAAAACTGAAGCCTCTGAAAAATAATATCAGTAAACACATATCAGCAAGTTATTTCATAAAACAAAGCAACTTACTAAACACAATGAACAGCAGACCAAGGATCAGTAACCAATAGAATCGAGTACAAGAGGAAACTGGAAAGGGAAGGAGATAGAACACACAATCTTATAGTAGTTCAATCAAAGAAAAGATCTACATCCTCTCACACTTTCATTCTGATTTTCACAGTATATATACAAGAAATTCAGAGACACCCTCTTCTGAGCTAGCCCAATTAACGTACTGAATTCTTAGCATACTTACACAATCGTCTTCTTCAATGTCTCAGTGATACAAGAGCGCTATACAGAGTGCACTAAAACCTCTCTCTCCCTTTCTCACACCCACTCACCCCAAATTCACCAATCTTCTATTCTCCAGCATATTAGGTTCTCAAATGGTCATCATAAAGCACGTATTGGTAGAGAAAATATCACTTAGCCATTTTGACAGTATCATGTGAATAATGTTTACATATCAGCTCCACAACGCCAGCTCATCTAAGATTGGACTACAAGAAAAGTTTGACTCTAGTTATCAAAATTCCAACATTGTTTAGGAATGATTACAAGTATAGGAACAAAAATAATCCCTTTGATTAGAGAACCTGACAAGAGTTGCACTGTTCTTTGAAATTCTCTTTTCCCTTGGTTATCAGGAATGGAAATTGGATGTGAGTAACAGAATAAGAGTTTGGTTGATGTCGACTCAACATCGTTAATTGAACATAAATATAAATTGGCTTTAAAATCTGCCTTTTTATTCAAATTCTTGAAATTCCCGACTGTTGGGAAGTCCTTGCTCGAAATCATGGAAATTGATTAATCAATTCATTTGAATTTCTTAGACTTTTAAGATAATATAATATTGAACTTAACGATCTAACAGTGGTTTAGTTGATTTTCTTAACACTTAAGTACACATCAAGTGACTGTTGGAGGTGAGTGACTTTTTTTTTTTTATAAAAAAAATACTGTTTAGATGATCTATATTTAGATGGTCTCTGGTTAGCATGTAGATAAAAGGTAGATTTCATAACTTTTGAGTCTATAGCCACTAAGTGTTGATCTTGCGGTACAAAGATAGGTGAAAAAAAGAGGTAAAGGAACGTCGAGGAAATGAGTTTGAACTCAAAGGTACCTGTCTAAGATATTAAAATTTTATGAATCTTCTTCTTTGTTGGATTAGATCATTCCTTGTCTAACTGATCATTTACGATAAGGAGGATTAATTTCAAGACAATGACTTGAAGTTTTTTTTGGTGTGGAACTGTGTAGTACAATCAGATATTGTATGTTTCGTGAAATGAAGAGTTGTCTCGTGAGATGAGTTTGATATATCAATTTAAAGACGAAAAAAAAAACTGTAGCGGTGAGCCAGTTATCCTTGGACAAGTATGAAAAGAAAGTGAAGGAAATCAGTGTGCTAGAGGTTGAGGCTGAATATAGTAATGGGGTAAAGGGTAGGATGGGTGAAATCCAAGGCAAGTCGACGGGAAAACCCAAGTCCTAGTGGGATGAGTGAGGACAAAAGCAGCATTGAGTTTGATTGGAGGCAGAGAAAGGCAGACATTATAAGCCTGAGATTGATGTCTCATCCCCAATGGCTTATGTAAGCCCACCGACACTAACACTAACACCAACACCAAAACCAACAACAAAACCCCTTCCCTTTTACTCCTTCCTCCAATGCCTCTTCTCAACTCCCACCAACTCTAAACTCTTTTCTTCACTCTTGGGTTTCCTCCAGACTGTCCCTTGACCCCACTTTCCCATTTTTCTATCTAATAATCCCCAACACACAAAATCTTTTAAAAAAATATTGTAATCAAACCTACTTGAGAATGAGATTTGTTAGAATAAGAAACCAAGTTTTGTTCTTGTAAAACTGTTATAGTCAAAGTCAAACAAGCCCCGGCTGTGTTTGAGACTGAACCAGAAGTTTCTGGATCACAGACCAGACATGTTTAAAGCTGTCTCTTATCTTTTTCTCTTAACTCTTGTATTGATATAAGAAACCATGTACTGGATGAAGATAACTCATTATCACTATGCTTTATCATATCAAACATCCAACTTTATTAATACTTAAATCTTATATTGTATTTATATTCTTTCTATCCTTTTCTTTTCTTGTTTATTTTTTTAGGTTAAAGTGTGAAGAATCCTGCAAAGAGGAGTTAAGATCACGCAGGAGTTTGTTATACATTTCACATGATCCACGAATCTCCATCTTTTCCTTTCCAACGTTTAACACTGCCCCTTTTACATTTTTAGCCCTTCCCCTCTCTTTCTCTCTCTTTTTTATGATTTATGAATTATGCAATTTGAGTCTGAAAAGTCTGAATCCACACAGCTGTGTTTGAATTGTGTATCACAATAGGTTTACACAGTCTAATTTTTATTTGCAAGTTTGTGAGATTAACAAGCTCAATTTCAATATTCGAGACTATATAGAAAATCTTATTTTTGAGCCAGATGTCATTAGGGCATTGAAAAATGGGAACTTTTATGAGGCATAGCATTTATAAATCTGCAGAAAGTTGTGAACTTTTTGATCCCCCACATGACAGCTAGCTAGATAGATGGTATGCAGCAAAGTTGAATAAATTGTTATGAATATTTGATGGATAAATAACAATGGTTGTATTGGTCAAAACTCAAATATGAGTTTTGTGTTATATTGTTATTGTTGCTGCTACCACCTCGGTAAGCGTAAGACCTAAATTTAAATGACTCTTAGTCTTGTCTTCTTTCTCATTAAAACATACAAAATAGCTTCTCTAAGCAGCCTCCTTTCATGAACCTTCCTCATATAGTTATTGTGTCTCAGGTTCGTTGAATCCCTATCAGATGCAAACATTCAATTTCATACCTTATGATAATCAAAATCTAATCGTATAATTAGATATTGAGTCACTAGCTAATCACACATTACCAAACATGCAAAATGTTTTGATTAAAGAGGAATAGAAAGGAAAAAGAAAATGAATTCATATACAAATAATCAACCAATACATATATTGGAATATTCTAGAAAATTTAATTTTAATTTTAGCTCAAGGTTTAAAAGAGTTAAGAGTAGAATTAGGATTTTAGTAGATCAAGATTGATGTTAGTTCTTTTTCAAAAAAAAAAAAAAATAGTTTAAATTTCACTATCTCATTGCTTCAACCTATTCTCTACTCTAATATAAATATTTGAATATGAGTTCAATTCATGGTATTTTATATATCTATTATCATTACTAATAATTTGAATAAGAAAATGATCATATTGAGACTTAGACCTAAAAATTATTTTGCGTTCATAGTCAACGGATTAATATATTATGAATACAACCATATGCATTAATATATCTATAACTTCCATAATTCTTTTATAGCATTATATAAGTATCTATTAAGCTATTGACTAATTCTACAATGGAGGCAAGTAAACTCATGTAATATCTTATTTACAACATGATATCAACAAACTTTAGCAACATTCTCGAAAAGAGATTGTTGGTGCTCGGATCTTGTCTACGTTGGGTTTGTGAGTGCTTGATGGCCTTGACCTCCAGCTCGTTTCCCTTTGGTCTGGTCTTGATCTTGTCCAAATTGACCTGCATAAGAGATTCTCGCATTGATGTGGTGTTGAGCTCACTACACTCCGATGCTTAAGTTAGTATTATGAATGATTCAACTAAGCATTAAAAGAAGAAAGGTTTGATCTCTCCTTTTGAGATTGCTTGTGTTTGAGTGAGGCTATTCATGAGTTAGTCCTCTGGCACATGCTCGCGGTTGTATGTGACGACAGGGGTGTGAGGGACGTTTCTAGCGCTCAAAGTAGTAGGGTGTTAGTTCGGCCTCAATTCCCCTATATATGCTTTTTTTTCCCTATACTTTTTGGGCTTTGAATCTAGCCTTGGACAACCCTCAAAGAAATAATTATCTGGTAAATCAATTAAGGACGAGTTGGATTGACTTTTTCAAGTGTTTAAATATACTTTCTTTTCTTTTCACTTTAGAAACATATCTTTAGCACATAAAAAGTGAATCCAAAATAGTCATGGGTAAGAAAATTTTTTATTTATTTATTTTTAGTTAAGTAGAATAAACAATTATCAGAAATCCCAAGGGCATAGTTGTCAAAAAACAAAAGTGGGTCCCGCATGCATCTAGTTGTTCATGTGTGTTTGTGTCCTAGTTTTAGCAGATATTATATATAGAGATCCATTCGTCAGCAAAATGGCATAAGAGACTCCCGGAAATTGTAGCTGTTGTTGTATGTGTGTCATTGAAATGGTTAGAGAAATATTAGAAACAGAATAGATGTAAACATTGATGTAATGGCGGCGAAGAAAACGTCACCGTTGCAGGGATTAGAAGCAGATGAATACCAAGAGCTTGAACCTCTCATTCAAACTTACCACAAATTTGAAGCTTTTCCTAACACTACCACTTCCCTCATTACCCAACGCATCGATGCTCCTCTTGACGCCGTCTGGCCCTTCGTTCGCAGCTTCGATAATCCCCAGAAGTATAAACACTTCATCAAAAGCTGTAACATGTCAGGTCAGCTTTTAAATATTACGACATTTCAAGTGTTCAAAAATATTTTTTTTCTTTTTTTTTTTTTAACAAAGAATTTAATATAGACATTTCAAACAGACAGGTTGTCTAAATTAGGGCATAATTTACGAGAATGATAAGAATAGTTTGATTCTATGTTGAACTAGACGCGTTTGAACTGATTTTGAAACGGTTAATATTACTATGTCGTGTTTAAACCATTCTTAAACATTACCTTTAATATTAGTTTAGGCTCTGTTTTGTTTTTAATTTTCTCAAAATTCAGAATAGTTTTCTCCCACTATCCCAAATTTTGAATCCTGGGTTTTTTCAAGTTAAATTTTAAAAACATTTTTTTTTTTTTTTTTTTTTATTTGGTTTTGAGGAACAGTAAGTTTTAAAAGCTAAATTGTTACCAAAATCTTAGTATTTAGTTTCACTTTGAAATATCATTTTTATTTTGAAGTAATTTTGAATACGGTGACAAAAGTGATTTTTTAAGTGTTTAAACACTCTAATAAAATTATTTGTTTTAAACAGCAGGGGATGGCGGGGTGGGGAGCATCAGAGAGGTGACGGTGGTCTCCGGCCTTCCGGCGTCGACAAGCACAGAAAGGCTAGAGATTTTGGACGACGAGAAGCATATTTTGAGCTTCAGGGTGGTCGGAGGAGAGCACCGGCTGAACAATTACCGATCAGTGACGTCGGTGAACGAGTTCAACAAAGACGGCAAAGTTTACACCGTCGTTTTGGAGTCTTACATCGTCGACATACCGGAAGGAAACACCGGCGAGGACACCAAAATGTTTGTCGACACTGTCATCAAATTGAATCTTCAAAAACTTGCTGGAGTTGCCACAGCCTCTCTGCATGAACATGAATAGGAGTGGCGGCAGCGCCGCCGGAGGATACTCTGCCGGCGGCAGATGGGATGGGACTTTTTTTTCTTTTTTTTCCCTTTAATGTTTGTATGATGATTAGTGGTGGATCGGTATGTTTTTTGCAAGTTGAATTTTATTTTTAGCTTGTTCTAATTTATTGGGTCCGCCGATAATGGATTGGTTGGGAGAATTAGAAGAGATGATATTATTCAGATTATATATATATATATATATATATTTTGGACAAATATTGTCTTAATTGATGTTTTATCAATAAAAGATTTGATGGGTTTTTTTTCTTTCTTTTATGTTTTGTGGGAAATTTTTTAGTATAGAAATTACTATAAACACAGAAAAAATGTCAAACTATTTAC

mRNA sequence

ATGAAGCCGGAAGCAGTTTATGATGTTGAACTTATCAGTTCTTCGCAGAGCATAAAACATGAATTTTGGCCTCTAGATCCAATTGATCCGGTTCAAGCAAAGTTCCCGTGCTGTTTGGTTTGGACTCCTCTTCCTGTTGTCTCTTGGTTGGCACCTTTCATTGGCCATGTTGGGATTTGCAGGGAGGATGGAATCATTTTAGATTTCGCAGGATCGAATTTTGTGAATACCAATGATTTTGCATTTGGTTCTGTTGCAAGATACCATCAACTCGACAGAGAAAAATGTTGCTTCCCCACGAGCTTAGCTGCACATAAATGTAAGCAGGGCTACCAGCATTCAGAGTATGGAACTGCCATTACCTGGGACGATGGCCTCCAATCAAGTACACGGTATTTCGAGCATAAATCGTACAACCTTTTTACATGCAACTGCCATTCCTTTATTGCCAATTGTCTGAACCGTCTTTGTTACGATGGATCAATGAGTTGGAACATGATAAATGTAGCAGCTCTAATTCTGTTCAAGGGACATTGGGTTAATGGCATGTCAATTGTAAGATCATTCCTTCCCTTTATACTGGTGGTCTGCCTGGGCATTGCCATGGTTGGATGGCCCTTCTTGATTGGTCTGTTTTCGCTTCCTCTCCTTTTGGTTGGTTGGTTTGTTCTGGAAAATCCTGTATCCGAATGGACCCAATCTATACTTGGTTCGATCAAATCCAAGTCATCGATCCCTAGTCATACGGATTCACCGCCCCAGAATCCCAACTCTAACCGACCCACCTACGAACTTTCGCAGCTGATCATTTACACGTTTCCAACTGTGGCCACAATCCAGCTCTCTCGGCCATTCTTTTGCTCTGTTTTCTGCTATTCCAATTTCTTCACTCGGGGCATGTCCTCTTCGCCGTCTCCGAATGCGAACGATGAGGAAGCTGTTCGAAGGAACCGAATTCTCTCCAGCAAGCTGTATTTTGATGTTCCTTCTTCAAAGGTTCCGGTGATATATTCCTCATTGTACGACATCTCATTTCTTGGAATAGAGAAGTTGCATCCATTTGATTCGAAGAAATGGGGTCGTGTATGCCAATTCCTTATTGCGGCTGGAGTTCTAAGGAAAGATCAAATCATCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTGGTACATCCGGAATCATACTTGAATAGTCTGAAGAACAGTTCGAATGTTGCTAAGATTATTGAGGTCCCTCCTGTTGCATTGTTTCCTCACTGTCTTGTTAAGGAGAAAGTTCAACGTCCATTTCGTAACCAGGTTGGAGGGAGCATATTAGCTGGAAAAATAGCAAAAGAGAGAGGATGGGCCATCAATGTAGGAGGTGGTTTTCACCATTGTTCAGCAGAACAAGGAGGGGGATTTTGTGTGTATGCAGATATTTCTCTGTGTATACACTACGCCTTTGTTCAGCTAAATATATCAAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGACGAGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTAGTGGGACCACAACAAGTGAATACTTGAAGAAATTAGATGAAGCACTCGAGGTTGCTGCCAGTTCATATGATCCAGAATTAATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTAGGCTTGTTAAAGATTAGTGCTGAGGGAATAGCCAAGAGAGATGAAAAGGTTTTCAGATTTGCCTGTGCGAGGAACATTCCCATTGTGATGCTGACGTCAGGCGGTTACATGAAATCTAGCGCTAAAGTCATTGCTGATTCAATTGAAAATCTCTCCAAGCGAAGTTTAATCGATACAGAAAGCTCTACAGGCAGAATGGTAGGATGGGTGAAATCCAAGGCAAGTCGACGGGAAAACCCAAGTCCTAGTGGGATGAGTGAGGACAAAAGCAGCATTGAGTTTGATTGGAGGCAGAGAAAGGCAGACATTATAAGCCTGAGATTGATGTCTCATCCCCAATGGCTTATAAACAGAATAGATGTAAACATTGATGTAATGGCGGCGAAGAAAACGTCACCGTTGCAGGGATTAGAAGCAGATGAATACCAAGAGCTTGAACCTCTCATTCAAACTTACCACAAATTTGAAGCTTTTCCTAACACTACCACTTCCCTCATTACCCAACGCATCGATGCTCCTCTTGACGCCGTCTGGCCCTTCGTTCGCAGCTTCGATAATCCCCAGAAGTATAAACACTTCATCAAAAGCTGTAACATGTCAGGGGATGGCGGGGTGGGGAGCATCAGAGAGGTGACGGTGGTCTCCGGCCTTCCGGCGTCGACAAGCACAGAAAGGCTAGAGATTTTGGACGACGAGAAGCATATTTTGAGCTTCAGGGTGGTCGGAGGAGAGCACCGGCTGAACAATTACCGATCAGTGACGTCGGTGAACGAGTTCAACAAAGACGGCAAAGTTTACACCGTCGTTTTGGAGTCTTACATCGTCGACATACCGGAAGGAAACACCGGCGAGGACACCAAAATGTTTGTCGACACTGTCATCAAATTGAATCTTCAAAAACTTGCTGGAGTTGCCACAGCCTCTCTGCATGAACATGAATAGGAGTGGCGGCAGCGCCGCCGGAGGATACTCTGCCGGCGGCAGATGGGATGGGACTTTTTTTTCTTTTTTTTCCCTTTAATGTTTGTATGATGATTAGTGGTGGATCGGTATGTTTTTTGCAAGTTGAATTTTATTTTTAGCTTGTTCTAATTTATTGGGTCCGCCGATAATGGATTGGTTGGGAGAATTAGAAGAGATGATATTATTCAGATTATATATATATATATATATATATTTTGGACAAATATTGTCTTAATTGATGTTTTATCAATAAAAGATTTGATGGGTTTTTTTTCTTTCTTTTATGTTTTGTGGGAAATTTTTTAGTATAGAAATTACTATAAACACAGAAAAAATGTCAAACTATTTAC

Coding sequence (CDS)

ATGAAGCCGGAAGCAGTTTATGATGTTGAACTTATCAGTTCTTCGCAGAGCATAAAACATGAATTTTGGCCTCTAGATCCAATTGATCCGGTTCAAGCAAAGTTCCCGTGCTGTTTGGTTTGGACTCCTCTTCCTGTTGTCTCTTGGTTGGCACCTTTCATTGGCCATGTTGGGATTTGCAGGGAGGATGGAATCATTTTAGATTTCGCAGGATCGAATTTTGTGAATACCAATGATTTTGCATTTGGTTCTGTTGCAAGATACCATCAACTCGACAGAGAAAAATGTTGCTTCCCCACGAGCTTAGCTGCACATAAATGTAAGCAGGGCTACCAGCATTCAGAGTATGGAACTGCCATTACCTGGGACGATGGCCTCCAATCAAGTACACGGTATTTCGAGCATAAATCGTACAACCTTTTTACATGCAACTGCCATTCCTTTATTGCCAATTGTCTGAACCGTCTTTGTTACGATGGATCAATGAGTTGGAACATGATAAATGTAGCAGCTCTAATTCTGTTCAAGGGACATTGGGTTAATGGCATGTCAATTGTAAGATCATTCCTTCCCTTTATACTGGTGGTCTGCCTGGGCATTGCCATGGTTGGATGGCCCTTCTTGATTGGTCTGTTTTCGCTTCCTCTCCTTTTGGTTGGTTGGTTTGTTCTGGAAAATCCTGTATCCGAATGGACCCAATCTATACTTGGTTCGATCAAATCCAAGTCATCGATCCCTAGTCATACGGATTCACCGCCCCAGAATCCCAACTCTAACCGACCCACCTACGAACTTTCGCAGCTGATCATTTACACGTTTCCAACTGTGGCCACAATCCAGCTCTCTCGGCCATTCTTTTGCTCTGTTTTCTGCTATTCCAATTTCTTCACTCGGGGCATGTCCTCTTCGCCGTCTCCGAATGCGAACGATGAGGAAGCTGTTCGAAGGAACCGAATTCTCTCCAGCAAGCTGTATTTTGATGTTCCTTCTTCAAAGGTTCCGGTGATATATTCCTCATTGTACGACATCTCATTTCTTGGAATAGAGAAGTTGCATCCATTTGATTCGAAGAAATGGGGTCGTGTATGCCAATTCCTTATTGCGGCTGGAGTTCTAAGGAAAGATCAAATCATCGAGCCTTTGGAAGCTAAGAAGAATGATCTTCTTGTGGTACATCCGGAATCATACTTGAATAGTCTGAAGAACAGTTCGAATGTTGCTAAGATTATTGAGGTCCCTCCTGTTGCATTGTTTCCTCACTGTCTTGTTAAGGAGAAAGTTCAACGTCCATTTCGTAACCAGGTTGGAGGGAGCATATTAGCTGGAAAAATAGCAAAAGAGAGAGGATGGGCCATCAATGTAGGAGGTGGTTTTCACCATTGTTCAGCAGAACAAGGAGGGGGATTTTGTGTGTATGCAGATATTTCTCTGTGTATACACTACGCCTTTGTTCAGCTAAATATATCAAGGGTAATGATTATTGATCTTGATGCCCATCAAGGAAATGGCCATGAAATGGATTTTGCCCATGATAGACGAGTATATATTCTTGATATGTTCAATCCTGGAATATATCCATTTAGTGGGACCACAACAAGTGAATACTTGAAGAAATTAGATGAAGCACTCGAGGTTGCTGCCAGTTCATATGATCCAGAATTAATTGTTTACAATGCTGGGACTGATATTCTAGATGGAGATCCTCTAGGCTTGTTAAAGATTAGTGCTGAGGGAATAGCCAAGAGAGATGAAAAGGTTTTCAGATTTGCCTGTGCGAGGAACATTCCCATTGTGATGCTGACGTCAGGCGGTTACATGAAATCTAGCGCTAAAGTCATTGCTGATTCAATTGAAAATCTCTCCAAGCGAAGTTTAATCGATACAGAAAGCTCTACAGGCAGAATGGTAGGATGGGTGAAATCCAAGGCAAGTCGACGGGAAAACCCAAGTCCTAGTGGGATGAGTGAGGACAAAAGCAGCATTGAGTTTGATTGGAGGCAGAGAAAGGCAGACATTATAAGCCTGAGATTGATGTCTCATCCCCAATGGCTTATAAACAGAATAGATGTAAACATTGATGTAATGGCGGCGAAGAAAACGTCACCGTTGCAGGGATTAGAAGCAGATGAATACCAAGAGCTTGAACCTCTCATTCAAACTTACCACAAATTTGAAGCTTTTCCTAACACTACCACTTCCCTCATTACCCAACGCATCGATGCTCCTCTTGACGCCGTCTGGCCCTTCGTTCGCAGCTTCGATAATCCCCAGAAGTATAAACACTTCATCAAAAGCTGTAACATGTCAGGGGATGGCGGGGTGGGGAGCATCAGAGAGGTGACGGTGGTCTCCGGCCTTCCGGCGTCGACAAGCACAGAAAGGCTAGAGATTTTGGACGACGAGAAGCATATTTTGAGCTTCAGGGTGGTCGGAGGAGAGCACCGGCTGAACAATTACCGATCAGTGACGTCGGTGAACGAGTTCAACAAAGACGGCAAAGTTTACACCGTCGTTTTGGAGTCTTACATCGTCGACATACCGGAAGGAAACACCGGCGAGGACACCAAAATGTTTGTCGACACTGTCATCAAATTGAATCTTCAAAAACTTGCTGGAGTTGCCACAGCCTCTCTGCATGAACATGAATAG

Protein sequence

MKPEAVYDVELISSSQSIKHEFWPLDPIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGICREDGIILDFAGSNFVNTNDFAFGSVARYHQLDREKCCFPTSLAAHKCKQGYQHSEYGTAITWDDGLQSSTRYFEHKSYNLFTCNCHSFIANCLNRLCYDGSMSWNMINVAALILFKGHWVNGMSIVRSFLPFILVVCLGIAMVGWPFLIGLFSLPLLLVGWFVLENPVSEWTQSILGSIKSKSSIPSHTDSPPQNPNSNRPTYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGMSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFSGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRMVGWVKSKASRRENPSPSGMSEDKSSIEFDWRQRKADIISLRLMSHPQWLINRIDVNIDVMAAKKTSPLQGLEADEYQELEPLIQTYHKFEAFPNTTTSLITQRIDAPLDAVWPFVRSFDNPQKYKHFIKSCNMSGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHILSFRVVGGEHRLNNYRSVTSVNEFNKDGKVYTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAGVATASLHEHE

Homology

[Close]

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot
Match: Q944K3 (Histone deacetylase 2 OS=Arabidopsis thaliana OX=3702 GN=HDA2 PE=2 SV=2)

HSP 1 Score: 487.3 bits (1253), Expect = 3.7e-136
Identity = 248/382 (64.92%), Postives = 292/382 (76.44%), Query Frame = 0


Query: 262 TYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGMSSSPSPNANDEEAVRRNRILS 321
           T +L+  +++TF           F   VF +     R    S    A   EA+RR RIL+
Sbjct: 14  TRDLAIYLLFTF-----------FAIKVFKFLFSCNRTSEISSFSMATHPEALRRERILN 73

Query: 322 SKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEPL 381
           SKLYFDVP SKV +IYSS YDISF+GIEKLHPFDS KWGRVC+FL++ G L +  I+EPL
Sbjct: 74  SKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPL 133

Query: 382 EAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSILA 441
           EA K DLLVVH E+YLNSLK+S+ VA+I EV PVA FP+ LV++KV  PFR QVGG+ILA
Sbjct: 134 EASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKVLYPFRKQVGGTILA 193

Query: 442 GKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQG 501
            K+A ERGWAIN+GGGFHHC+AE+GGGFC +ADISLCIH+AF++L ISRVMIIDLDAHQG
Sbjct: 194 AKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQG 253

Query: 502 NGHEMDFAHDRRVYILDMFNPGIYPF---------------SGTTTSEYLKKLDEALEVA 561
           NGHE D   D RVYILDM+NP IYPF               SGTTT EYL+KLDEALEVA
Sbjct: 254 NGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVA 313

Query: 562 ASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGGYM 621
           + ++ PEL++YNAGTDILDGDPLGLLKIS +GI  RDEKVFRFA  +NIP+VMLTSGGYM
Sbjct: 314 SRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYM 373

Query: 622 KSSAKVIADSIENLSKRSLIDT 629
           KSSA+VIADSIENLS++ LI T
Sbjct: 374 KSSARVIADSIENLSRQGLIQT 384

[Close]

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot
Match: Q9GKU5 (Histone deacetylase 11 OS=Macaca fascicularis OX=9541 GN=HDAC11 PE=2 SV=2)

HSP 1 Score: 346.3 bits (887), Expect = 1.0e-93
Identity = 174/326 (53.37%), Postives = 224/326 (68.71%), Query Frame = 0


Query: 321 SSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEP 380
           +++LY  VP ++ P++YS  Y+I+F+G+EKLHPFD+ KWG+V  FL    +L    ++E 
Sbjct: 4   TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63

Query: 381 LEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSIL 440
            EA + DLLVVH   YLN LK S  VA I E+PPV   P+ LV+ KV RP R Q GG+I+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 441 AGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 500
           AGK+A ERGWAINVGGGFHHCS+++GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 501 QGNGHEMDFAHDRRVYILDMFNPGIYPFS---------------GTTTSEYLKKLDEALE 560
           QGNGHE DF  D+RVYI+D++N  IYP                 GT   EYL K++  +E
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIE 243

Query: 561 VAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGG 620
            +   + P+++VYNAGTDIL+GD LG L IS  GI KRDE VFR    R++PI+M+TSGG
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGG 303

Query: 621 YMKSSAKVIADSIENLSKRSLIDTES 631
           Y K +A++IADSI NL    LI  ES
Sbjct: 304 YQKRTARIIADSILNLFGLGLIGPES 329

[Close]

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot
Match: Q96DB2 (Histone deacetylase 11 OS=Homo sapiens OX=9606 GN=HDAC11 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.9e-93
Identity = 173/326 (53.07%), Postives = 223/326 (68.40%), Query Frame = 0


Query: 321 SSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEP 380
           +++LY  VP ++ P++YS  Y+I+F+G+EKLHPFD+ KWG+V  FL    +L    ++E 
Sbjct: 4   TTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEA 63

Query: 381 LEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSIL 440
            EA + DLLVVH   YLN LK S  VA I E+PPV   P+ LV+ KV RP R Q GG+I+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 441 AGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 500
           AGK+A ERGWAINVGGGFHHCS+++GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 501 QGNGHEMDFAHDRRVYILDMFNPGIYPFS---------------GTTTSEYLKKLDEALE 560
           QGNGHE DF  D+RVYI+D++N  IYP                 GT   EYL K++  ++
Sbjct: 184 QGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIK 243

Query: 561 VAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGG 620
            +   + P+++VYNAGTDIL+GD LG L IS  GI KRDE VFR    R +PI+M+TSGG
Sbjct: 244 KSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGG 303

Query: 621 YMKSSAKVIADSIENLSKRSLIDTES 631
           Y K +A++IADSI NL    LI  ES
Sbjct: 304 YQKRTARIIADSILNLFGLGLIGPES 329

[Close]

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot
Match: Q91WA3 (Histone deacetylase 11 OS=Mus musculus OX=10090 GN=Hdac11 PE=1 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.5e-92
Identity = 172/325 (52.92%), Postives = 222/325 (68.31%), Query Frame = 0


Query: 321 SSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEP 380
           +++LY  VP  + P++YS  Y+I+F+G+EKLHPFD+ KWG+V  FL    +L    ++E 
Sbjct: 4   ATQLYQHVPEKRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDGMLVEA 63

Query: 381 LEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSIL 440
            EA + DLLVVH   YLN LK S  VA I E+PPV   P+ LV+ KV RP R Q GG+I+
Sbjct: 64  REASEEDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIM 123

Query: 441 AGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQL-NISRVMIIDLDAH 500
           AGK+A ERGWAINVGGGFHHCS+++GGGFC YADI+L I + F ++  ISR  IIDLDAH
Sbjct: 124 AGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAH 183

Query: 501 QGNGHEMDFAHDRRVYILDMFNPGIYPFS---------------GTTTSEYLKKLDEALE 560
           QGNGHE DF  D+RVYI+D++N  IYP                 GT   EYL+K++  + 
Sbjct: 184 QGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKEAIRRKVELEWGTEDEEYLEKVERNVR 243

Query: 561 VAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGG 620
            +   + P+++VYNAGTD+L+GD LG L IS  GI KRDE VFR   A +IPI+M+TSGG
Sbjct: 244 RSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGG 303

Query: 621 YMKSSAKVIADSIENLSKRSLIDTE 630
           Y K +A++IADSI NL    LI  E
Sbjct: 304 YQKRTARIIADSILNLHDLGLIGPE 328

[Close]

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 8.5e-88
Identity = 141/221 (63.80%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 4   EAVYDVELISSSQSIKHEFWPLDPIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGICRED 63
           + V  V + S  ++ + + WPL  ID  ++KFPCC+VWTPLPVVSWLAPFIGH+G+CRED
Sbjct: 20  DRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCRED 79

Query: 64  GIILDFAGSNFVNTNDFAFGSVARYHQLDREKCCFPTSLAAHKCKQGYQHSEYGTAITWD 123
           G+ILDFAGSNF+N +DFAFG  ARY QLDR KCC P ++  H CK G++H+++GTA TWD
Sbjct: 80  GVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWD 139

Query: 124 DGLQSSTRYFEHKSYNLFTCNCHSFIANCLNRLCYDGSMSWNMINVAALILFKGHWVNGM 183
           + L SSTR FEHK+YN+FTCNCHSF+ANCLNRLCY GSM WNM+NVA L++ KG W+NG 
Sbjct: 140 NALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGS 199

Query: 184 SIVRSFLPFILVVCLGIAMVGWPFLIGLFSLPLLLVGWFVL 225
           S+VRSFLP  +V  LG+ +VGWPFLIGL S  LLL  WF++
Sbjct: 200 SVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFII 240

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BLAST of Lsi04G014330 vs. ExPASy TrEMBL
Match: A0A5D3D9B1 (Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002220 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 2.0e-177
Identity = 321/351 (91.45%), Postives = 328/351 (93.45%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SPNAN+ E VRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPNANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+VKEKVQRPFRNQVGGSILAGK+AKE+GWAINVGGGFHHCSAEQGGGFCVYADISLCI
Sbjct: 121 HCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRM 636
           KVFRFA ARNIPIVMLTSGGYMKSSAKVIADSIENLSK+ LIDTESS  RM
Sbjct: 301 KVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSPDRM 351

[Close]

BLAST of Lsi04G014330 vs. ExPASy TrEMBL
Match: A0A1S3BUF6 (Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103493650 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 2.0e-177
Identity = 321/351 (91.45%), Postives = 328/351 (93.45%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SPNAN+ E VRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPNANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+VKEKVQRPFRNQVGGSILAGK+AKE+GWAINVGGGFHHCSAEQGGGFCVYADISLCI
Sbjct: 121 HCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRM 636
           KVFRFA ARNIPIVMLTSGGYMKSSAKVIADSIENLSK+ LIDTESS  RM
Sbjct: 301 KVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSPDRM 351

[Close]

BLAST of Lsi04G014330 vs. ExPASy TrEMBL
Match: A0A0A0L030 (Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_4G645990 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 2.5e-175
Identity = 317/350 (90.57%), Postives = 327/350 (93.43%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SP+AND EAVRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPDANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQII+PLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+VKEKVQRPFRNQVGGSILAGK+AKE+GWAINVGGGFHHCSAE+GGGFCVYADISLCI
Sbjct: 121 HCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNIS+ MIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGR 635
           KVFRFA ARNIPIVMLTSGGYMKSSAKVIADSIENLSK+ LIDTESS  R
Sbjct: 301 KVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSPHR 350

[Close]

BLAST of Lsi04G014330 vs. ExPASy TrEMBL
Match: A0A6J1CF45 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 6.2e-166
Identity = 300/350 (85.71%), Postives = 316/350 (90.29%), Query Frame = 0


Query: 300 MSSSPSP-NANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKK 359
           MSSS SP N ND E  RR+RILS+KLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKK
Sbjct: 1   MSSSSSPENGNDPETARRDRILSTKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKK 60

Query: 360 WGRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALF 419
           W RVCQFL+AAGVLRKDQI+EPLEAKKNDLLVVHP+SYL+SLKNS NVAKIIEVPPVA+F
Sbjct: 61  WRRVCQFLVAAGVLRKDQIVEPLEAKKNDLLVVHPQSYLDSLKNSLNVAKIIEVPPVAVF 120

Query: 420 PHCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLC 479
           PHC+VK KVQRPFRNQVGG+ILA K+AKERGWAINVGGGFHHCSAE GGGFCVYADISLC
Sbjct: 121 PHCIVKNKVQRPFRNQVGGTILAAKLAKERGWAINVGGGFHHCSAELGGGFCVYADISLC 180

Query: 480 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF----------- 539
           IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF           
Sbjct: 181 IHYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQK 240

Query: 540 ----SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRD 599
               SGT TSEYLKKL+EALE+AA+SYDP+LIVYNAGTDILDGDPLGLLKISA GIA RD
Sbjct: 241 VEVDSGTKTSEYLKKLEEALEIAATSYDPDLIVYNAGTDILDGDPLGLLKISAGGIAMRD 300

Query: 600 EKVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTG 634
           EKVF+FA  RNIPIVMLTSGGYMKSSAKVIADSIENLSK+SLIDT SS G
Sbjct: 301 EKVFKFARTRNIPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTGSSPG 350

[Close]

BLAST of Lsi04G014330 vs. ExPASy TrEMBL
Match: A0A6J1J4E1 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111481226 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 2.9e-163
Identity = 293/344 (85.17%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 307 NANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFL 366
           ++ND E VRR+RILSSKLYFDVPSSKVPVIYSS Y+ISFLGIEKLHPFDSKKWGRVCQFL
Sbjct: 2   SSNDAETVRRDRILSSKLYFDVPSSKVPVIYSSSYNISFLGIEKLHPFDSKKWGRVCQFL 61

Query: 367 IAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEK 426
           +AAGV+RKDQIIEPLEAK NDLLVVH ESYLNSLKNS NVAKIIEVPPVALFPHC+VKEK
Sbjct: 62  VAAGVIRKDQIIEPLEAKMNDLLVVHTESYLNSLKNSLNVAKIIEVPPVALFPHCIVKEK 121

Query: 427 VQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQL 486
           V+RPFRNQVGGSILA K+AK RGWAINVGGGFHHCSAEQGGGFC+YADI+LCIHYAFVQL
Sbjct: 122 VERPFRNQVGGSILAAKVAKGRGWAINVGGGFHHCSAEQGGGFCMYADITLCIHYAFVQL 181

Query: 487 NISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF---------------SGTT 546
           NIS VMIIDLDAHQGNGHE DF+HD RVYILDMFNP IYPF               SGTT
Sbjct: 182 NISSVMIIDLDAHQGNGHEKDFSHDSRVYILDMFNPEIYPFDYEARRCINQKVEVVSGTT 241

Query: 547 TSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFAC 606
           TSEYLKKL+EALEVA++SYDPELIVYNAGTDILDGDPLGLLKISA+GIA+RDEKVFRFA 
Sbjct: 242 TSEYLKKLEEALEVASTSYDPELIVYNAGTDILDGDPLGLLKISADGIARRDEKVFRFAR 301

Query: 607 ARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRM 636
           AR IPIVMLTSGGYMKSSAKVIADSIENLSK++LIDT S+ GRM
Sbjct: 302 ARRIPIVMLTSGGYMKSSAKVIADSIENLSKQNLIDTGSTPGRM 345

[Close]

BLAST of Lsi04G014330 vs. NCBI nr
Match: KAG7037723.1 (Histone deacetylase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1271.9 bits (3290), Expect = 0.0e+00
Identity = 659/898 (73.39%), Postives = 705/898 (78.51%), Query Frame = 0


Query: 1   MKPEAVYDVELISSSQSIKHEFWPLDPIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC 60
           M P+AVYDVEL+SS++SIKHE WPLD IDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC
Sbjct: 9   MMPQAVYDVELVSSTKSIKHELWPLDAIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC 68

Query: 61  REDGIILDFAGSNFVNTNDFAFGSVARYHQLDREKCCFPTSLAAHKCKQGYQHSEYGTAI 120
           REDG+ILDFAGSNFVNTNDFAFG VARY QLDREKCCFPTSLAAHKCKQGYQHS++GTAI
Sbjct: 69  REDGVILDFAGSNFVNTNDFAFGPVARYLQLDREKCCFPTSLAAHKCKQGYQHSQFGTAI 128

Query: 121 TWDDGLQSSTRYFEHKSYNLFTCNCHSFIANCLNRLCYDGSMSWNMINVAALILFKGHWV 180
           TWDDGLQSS RY EHKSYNLFTCNCHSF+ANCLNR CYDGSMSWNMINVAALIL+KGHWV
Sbjct: 129 TWDDGLQSSKRYLEHKSYNLFTCNCHSFVANCLNRACYDGSMSWNMINVAALILWKGHWV 188

Query: 181 NGMSIVRSFLPFILVVCLGIAMVGWPFLIGLFSLPLLLVGWFVLENPVSEWTQSILGSIK 240
           +GMSI                                                       
Sbjct: 189 DGMSI------------------------------------------------------- 248

Query: 241 SKSSIPSHTDSPPQNPNSNRPTYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGM 300
                                      L  Y F  VA I  SRPF   +FC + FFTR M
Sbjct: 249 ---------------------------LTAYLFSIVAIILRSRPFSGPIFCCATFFTRIM 308

Query: 301 SSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWG 360
           SS  +      E VRR+RILSSKLYFDVPSSKVPVIYSS Y+ISFLGIEKLHPFDSKKWG
Sbjct: 309 SSDAA------ETVRRDRILSSKLYFDVPSSKVPVIYSSSYNISFLGIEKLHPFDSKKWG 368

Query: 361 RVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPH 420
           RVCQFL+AAGV+RKDQIIEPLEAK NDLLVVH ESYLNSLKNS NVAKIIEVPPVALFPH
Sbjct: 369 RVCQFLVAAGVIRKDQIIEPLEAKMNDLLVVHTESYLNSLKNSLNVAKIIEVPPVALFPH 428

Query: 421 CLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIH 480
           C+VKEKV+RPFRNQVGGSILA K+AK RGWAINVGGGFHHCSAE+GGGFC+YADI+LCIH
Sbjct: 429 CIVKEKVERPFRNQVGGSILAAKVAKGRGWAINVGGGFHHCSAERGGGFCMYADITLCIH 488

Query: 481 YAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------- 540
           YAFVQLNIS VMIIDLDAHQGNGHE DF+HD RVYILDMFNP IYPF             
Sbjct: 489 YAFVQLNISSVMIIDLDAHQGNGHEKDFSHDSRVYILDMFNPEIYPFDYEARRCINQKVE 548

Query: 541 --SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEK 600
             SGT TSEYLKKL+EALEVA++SYDPELIVYNAGTDILDGDPLGLLKIS +GIA+RDEK
Sbjct: 549 VVSGTRTSEYLKKLEEALEVASTSYDPELIVYNAGTDILDGDPLGLLKISVDGIARRDEK 608

Query: 601 VFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRMVGWVKSKASR 660
           VFRFA AR+IPIVMLTSGGYMKSSAKVIADSIENLSK++LIDT SS GRM   +K + SR
Sbjct: 609 VFRFARARSIPIVMLTSGGYMKSSAKVIADSIENLSKQNLIDTGSSPGRM---LKCEKSR 668

Query: 661 RENPSPSGMSEDKSSIEFDWRQRKADIISLRLMSHPQWLINRIDVNIDVMAAKKTSPLQG 720
           +E   P                RK  + +  +  +  W          VMA +KTSPLQG
Sbjct: 669 KEESLP---------------YRKRRLYNTEIHVNFIWF---------VMAMEKTSPLQG 728

Query: 721 LEADEYQELEPLIQTYHKFEAFPNTTTSLITQRIDAPLDAVWPFVRSFDNPQKYKHFIKS 780
           LEA+E+QELEPLIQ+YHKFEA PNTTTSLITQRIDAPL AVWPFVRSFDNPQKYKHF+KS
Sbjct: 729 LEAEEFQELEPLIQSYHKFEASPNTTTSLITQRIDAPLHAVWPFVRSFDNPQKYKHFVKS 788

Query: 781 CNMS-GDGGVGSIREVTVVSGLPASTSTERLEILDDEKHILSFRVVGGEHRLNNYRSVTS 840
           CNMS GDGGVGSIREVTVVSGLPASTSTERLEILD+EKHILSFRVVGGEHRLNNYRSVTS
Sbjct: 789 CNMSAGDGGVGSIREVTVVSGLPASTSTERLEILDEEKHILSFRVVGGEHRLNNYRSVTS 791

Query: 841 VNEFNKDGKVYTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAGVATASLHEHE 883
           VNEFNKDGK+YTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAG A ASLH HE
Sbjct: 849 VNEFNKDGKIYTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAGAAIASLHGHE 791

[Close]

BLAST of Lsi04G014330 vs. NCBI nr
Match: KAG6608382.1 (Histone deacetylase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 884.8 bits (2285), Expect = 6.2e-253
Identity = 447/620 (72.10%), Postives = 479/620 (77.26%), Query Frame = 0


Query: 1   MKPEAVYDVELISSSQSIKHEFWPLDPIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC 60
           M P+AVYDVEL+SS++SIKHE WPLD IDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MMPQAVYDVELVSSTKSIKHELWPLDAIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGIC 60

Query: 61  REDGIILDFAGSNFVNTNDFAFGSVARYHQLDREKCCFPTSLAAHKCKQGYQHSEYGTAI 120
           REDG+ILDFAGSNFVNTNDFAFG VARY QLDREKCCFPTSLAAHKCKQGYQHS++GTAI
Sbjct: 61  REDGVILDFAGSNFVNTNDFAFGPVARYLQLDREKCCFPTSLAAHKCKQGYQHSQFGTAI 120

Query: 121 TWDDGLQSSTRYFEHKSYNLFTCNCHSFIANCLNRLCYDGSMSWNMINVAALILFKGHWV 180
           TWDDGLQSS RY EHKSYNLFTCNCHSF+ANCLNR CYDGSMSWNMINVAALIL+KGHWV
Sbjct: 121 TWDDGLQSSKRYLEHKSYNLFTCNCHSFVANCLNRACYDGSMSWNMINVAALILWKGHWV 180

Query: 181 NGMSIVRSFLPFILVVCLGIAMVGWPFLIGLFSLPLLLVGWFVLENPVSEWTQSILGSIK 240
           +GMSI                                                       
Sbjct: 181 DGMSI------------------------------------------------------- 240

Query: 241 SKSSIPSHTDSPPQNPNSNRPTYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGM 300
                                      L +Y F  VA I  SRPF   +FC + FFTR M
Sbjct: 241 ---------------------------LTVYLFSIVAIIVRSRPFSGPIFCCATFFTRIM 300

Query: 301 SSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWG 360
           SS  +      E VRR+RILSSKLYFDVPSSKVPVIYSS Y+ISFLGIEKLHPFDSKKWG
Sbjct: 301 SSDAA------ETVRRDRILSSKLYFDVPSSKVPVIYSSSYNISFLGIEKLHPFDSKKWG 360

Query: 361 RVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPH 420
           RVCQFL+AAGV+RKDQIIEPLEAK NDLLVVH ESYLNSLKNS NVAKIIEVPPVALFPH
Sbjct: 361 RVCQFLVAAGVIRKDQIIEPLEAKMNDLLVVHTESYLNSLKNSLNVAKIIEVPPVALFPH 420

Query: 421 CLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIH 480
           C+VKEKV+RPFRNQVGGSILA K+AK RGWAINVGGGFHHCSAE+GGGFC+YADI+LCIH
Sbjct: 421 CIVKEKVERPFRNQVGGSILAAKVAKGRGWAINVGGGFHHCSAERGGGFCMYADITLCIH 480

Query: 481 YAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------- 540
           YAFVQLNIS VMIIDLDAHQGNGHE DF+HD RVYILDMFNP IYPF             
Sbjct: 481 YAFVQLNISSVMIIDLDAHQGNGHEKDFSHDSRVYILDMFNPEIYPFDYEARRCINQKVE 532

Query: 541 --SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEK 600
             SGT TSEYLKKL+EALEVA++SYDPELIVYNAGTDILDGDPLGLLKISA+GIA+RDEK
Sbjct: 541 VVSGTRTSEYLKKLEEALEVASTSYDPELIVYNAGTDILDGDPLGLLKISADGIARRDEK 532

Query: 601 VFRFACARNIPIVMLTSGGY 606
           VFRFA AR+IPIVMLTS  +
Sbjct: 601 VFRFARARSIPIVMLTSAKF 532

[Close]

BLAST of Lsi04G014330 vs. NCBI nr
Match: XP_008452709.1 (PREDICTED: histone deacetylase 2 [Cucumis melo] >KAA0064492.1 histone deacetylase 2 [Cucumis melo var. makuwa] >TYK20098.1 histone deacetylase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 632.9 bits (1631), Expect = 4.2e-177
Identity = 321/351 (91.45%), Postives = 328/351 (93.45%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SPNAN+ E VRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPNANNGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+VKEKVQRPFRNQVGGSILAGK+AKE+GWAINVGGGFHHCSAEQGGGFCVYADISLCI
Sbjct: 121 HCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAEQGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGRM 636
           KVFRFA ARNIPIVMLTSGGYMKSSAKVIADSIENLSK+ LIDTESS  RM
Sbjct: 301 KVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSPDRM 351

[Close]

BLAST of Lsi04G014330 vs. NCBI nr
Match: XP_038899967.1 (histone deacetylase 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 627.1 bits (1616), Expect = 2.3e-175
Identity = 317/350 (90.57%), Postives = 327/350 (93.43%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SPNAND E VRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPNANDGETVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQIIEP EAKKNDLLVVH ESYL+SLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIEPFEAKKNDLLVVHSESYLDSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+V+EKVQRPFRNQVGGSILAGK+AKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI
Sbjct: 121 HCVVEEKVQRPFRNQVGGSILAGKVAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNISRVMI+DLDAHQGNGHEMDFA+DRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISRVMIVDLDAHQGNGHEMDFAYDRRVYILDMFNPGIYPFDHEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGR 635
           KVFRFA ARN+PIVMLTSGGYMKSSAKVIADSIENLSK+SLIDTESS GR
Sbjct: 301 KVFRFARARNVPIVMLTSGGYMKSSAKVIADSIENLSKQSLIDTESSPGR 350

[Close]

BLAST of Lsi04G014330 vs. NCBI nr
Match: XP_004141312.1 (histone deacetylase 2 isoform X2 [Cucumis sativus] >KGN55325.1 hypothetical protein Csa_012457 [Cucumis sativus])

HSP 1 Score: 625.9 bits (1613), Expect = 5.2e-175
Identity = 317/350 (90.57%), Postives = 327/350 (93.43%), Query Frame = 0


Query: 300 MSSSPSPNANDEEAVRRNRILSSKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKW 359
           MSSS SP+AND EAVRR+RILSSKLYFDVPSSKVPVIYSS YDISFLGIEKLHPFDSKKW
Sbjct: 1   MSSSLSPDANDGEAVRRDRILSSKLYFDVPSSKVPVIYSSSYDISFLGIEKLHPFDSKKW 60

Query: 360 GRVCQFLIAAGVLRKDQIIEPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 419
           GRVCQFLIAAGVLRKDQII+PLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP
Sbjct: 61  GRVCQFLIAAGVLRKDQIIKPLEAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFP 120

Query: 420 HCLVKEKVQRPFRNQVGGSILAGKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCI 479
           HC+VKEKVQRPFRNQVGGSILAGK+AKE+GWAINVGGGFHHCSAE+GGGFCVYADISLCI
Sbjct: 121 HCVVKEKVQRPFRNQVGGSILAGKVAKEKGWAINVGGGFHHCSAERGGGFCVYADISLCI 180

Query: 480 HYAFVQLNISRVMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF------------ 539
           HYAFVQLNIS+ MIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPF            
Sbjct: 181 HYAFVQLNISKAMIIDLDAHQGNGHEMDFAHDRRVYILDMFNPGIYPFDYEARRCIDQKV 240

Query: 540 ---SGTTTSEYLKKLDEALEVAASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 599
              SGTTTSEYLKKLDEALEVAA+SYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE
Sbjct: 241 EVVSGTTTSEYLKKLDEALEVAATSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDE 300

Query: 600 KVFRFACARNIPIVMLTSGGYMKSSAKVIADSIENLSKRSLIDTESSTGR 635
           KVFRFA ARNIPIVMLTSGGYMKSSAKVIADSIENLSK+ LIDTESS  R
Sbjct: 301 KVFRFARARNIPIVMLTSGGYMKSSAKVIADSIENLSKQRLIDTESSPHR 350

[Close]

BLAST of Lsi04G014330 vs. TAIR 10
Match: AT5G26040.2 (histone deacetylase 2 )

HSP 1 Score: 487.3 bits (1253), Expect = 2.7e-137
Identity = 248/382 (64.92%), Postives = 292/382 (76.44%), Query Frame = 0


Query: 262 TYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGMSSSPSPNANDEEAVRRNRILS 321
           T +L+  +++TF           F   VF +     R    S    A   EA+RR RIL+
Sbjct: 14  TRDLAIYLLFTF-----------FAIKVFKFLFSCNRTSEISSFSMATHPEALRRERILN 73

Query: 322 SKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEPL 381
           SKLYFDVP SKV +IYSS YDISF+GIEKLHPFDS KWGRVC+FL++ G L +  I+EPL
Sbjct: 74  SKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPL 133

Query: 382 EAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSILA 441
           EA K DLLVVH E+YLNSLK+S+ VA+I EV PVA FP+ LV++KV  PFR QVGG+ILA
Sbjct: 134 EASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKVLYPFRKQVGGTILA 193

Query: 442 GKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQG 501
            K+A ERGWAIN+GGGFHHC+AE+GGGFC +ADISLCIH+AF++L ISRVMIIDLDAHQG
Sbjct: 194 AKLATERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQG 253

Query: 502 NGHEMDFAHDRRVYILDMFNPGIYPF---------------SGTTTSEYLKKLDEALEVA 561
           NGHE D   D RVYILDM+NP IYPF               SGTTT EYL+KLDEALEVA
Sbjct: 254 NGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVA 313

Query: 562 ASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGGYM 621
           + ++ PEL++YNAGTDILDGDPLGLLKIS +GI  RDEKVFRFA  +NIP+VMLTSGGYM
Sbjct: 314 SRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYM 373

Query: 622 KSSAKVIADSIENLSKRSLIDT 629
           KSSA+VIADSIENLS++ LI T
Sbjct: 374 KSSARVIADSIENLSRQGLIQT 384

[Close]

BLAST of Lsi04G014330 vs. TAIR 10
Match: AT5G26040.1 (histone deacetylase 2 )

HSP 1 Score: 426.0 bits (1094), Expect = 7.3e-119
Identity = 226/382 (59.16%), Postives = 266/382 (69.63%), Query Frame = 0


Query: 262 TYELSQLIIYTFPTVATIQLSRPFFCSVFCYSNFFTRGMSSSPSPNANDEEAVRRNRILS 321
           T +L+  +++TF           F   VF +     R    S    A   EA+RR RIL+
Sbjct: 14  TRDLAIYLLFTF-----------FAIKVFKFLFSCNRTSEISSFSMATHPEALRRERILN 73

Query: 322 SKLYFDVPSSKVPVIYSSLYDISFLGIEKLHPFDSKKWGRVCQFLIAAGVLRKDQIIEPL 381
           SKLYFDVP SKV +IYSS YDISF+GIEKLHPFDS KWGRVC+FL++ G L +  I+EPL
Sbjct: 74  SKLYFDVPLSKVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPL 133

Query: 382 EAKKNDLLVVHPESYLNSLKNSSNVAKIIEVPPVALFPHCLVKEKVQRPFRNQVGGSILA 441
           EA K DLLVVH E+YLNSLK+S+ VA+I EV PVA FP+ LV++KV  PFR QVGG+ILA
Sbjct: 134 EASKIDLLVVHSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKVLYPFRKQVGGTILA 193

Query: 442 GKIAKERGWAINVGGGFHHCSAEQGGGFCVYADISLCIHYAFVQLNISRVMIIDLDAHQG 501
            K+A ERGWAIN+GGGFHHC+AE+G                            DLDAHQG
Sbjct: 194 AKLATERGWAINIGGGFHHCTAERG----------------------------DLDAHQG 253

Query: 502 NGHEMDFAHDRRVYILDMFNPGIYPF---------------SGTTTSEYLKKLDEALEVA 561
           NGHE D   D RVYILDM+NP IYPF               SGTTT EYL+KLDEALEVA
Sbjct: 254 NGHETDLGDDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVA 313

Query: 562 ASSYDPELIVYNAGTDILDGDPLGLLKISAEGIAKRDEKVFRFACARNIPIVMLTSGGYM 621
           + ++ PEL++YNAGTDILDGDPLGLLKIS +GI  RDEKVFRFA  +NIP+VMLTSGGYM
Sbjct: 314 SRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYM 356

Query: 622 KSSAKVIADSIENLSKRSLIDT 629
           KSSA+VIADSIENLS++ LI T
Sbjct: 374 KSSARVIADSIENLSRQGLIQT 356

[Close]

BLAST of Lsi04G014330 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 326.6 bits (836), Expect = 6.0e-89
Identity = 141/221 (63.80%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 4   EAVYDVELISSSQSIKHEFWPLDPIDPVQAKFPCCLVWTPLPVVSWLAPFIGHVGICRED 63
           + V  V + S  ++ + + WPL  ID  ++KFPCC+VWTPLPVVSWLAPFIGH+G+CRED
Sbjct: 20  DRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCRED 79

Query: 64  GIILDFAGSNFVNTNDFAFGSVARYHQLDREKCCFPTSLAAHKCKQGYQHSEYGTAITWD 123
           G+ILDFAGSNF+N +DFAFG  ARY QLDR KCC P ++  H CK G++H+++GTA TWD
Sbjct: 80  GVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWD 139

Query: 124 DGLQSSTRYFEHKSYNLFTCNCHSFIANCLNRLCYDGSMSWNMINVAALILFKGHWVNGM 183
           + L SSTR FEHK+YN+FTCNCHSF+ANCLNRLCY GSM WNM+NVA L++ KG W+NG 
Sbjct: 140 NALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGS 199

Query: 184 SIVRSFLPFILVVCLGIAMVGWPFLIGLFSLPLLLVGWFVL 225
           S+VRSFLP  +V  LG+ +VGWPFLIGL S  LLL  WF++
Sbjct: 200 SVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFII 240

[Close]

BLAST of Lsi04G014330 vs. TAIR 10
Match: AT2G26040.1 (PYR1-like 2 )

HSP 1 Score: 257.7 bits (657), Expect = 3.4e-68
Identity = 130/184 (70.65%), Postives = 152/184 (82.61%), Query Frame = 0


Query: 703 LQGLEADEYQELEPLIQTYHKFEAFPNTTTSLITQRIDAPLDAVWPFVRSFDNPQKYKHF 762
           ++GL  +E + LEP+I+TYH+FE  P T TSLITQRI AP   VWP +R FDNP++YKHF
Sbjct: 7   VKGLTDEEQKTLEPVIKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHF 66

Query: 763 IKSCNM-SGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHILSFRVVGGEHRLNNYRS 822
           +K C + SGDG VGS+REVTV+SGLPASTSTERLE +DD+  +LSFRVVGGEHRL NY+S
Sbjct: 67  VKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKS 126

Query: 823 VTSVNEF-NKD-GKVYTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAGVAT-ASL 882
           VTSVNEF N+D GKVYTVVLESY VDIPEGNT EDTKMFVDTV+KLNLQKL   AT A +
Sbjct: 127 VTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNLQKLGVAATSAPM 186

[Close]

BLAST of Lsi04G014330 vs. TAIR 10
Match: AT1G73000.1 (PYR1-like 3 )

HSP 1 Score: 234.6 bits (597), Expect = 3.1e-61
Identity = 120/184 (65.22%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 705 GLEADEYQELEPLIQTYHKFEAFPNTTTSLITQRIDAPLDAVWPFVRSFDNPQKYKHFIK 764
           GL  DE+  L+ +I+T+H F   PNT TSLI  R+DAP  A+W FVR F NP KYKHFIK
Sbjct: 24  GLTKDEFSTLDSIIRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIK 83

Query: 765 SCNMSGDGG------VGSIREVTVVSGLPASTSTERLEILDDEKHILSFRVVGGEHRLNN 824
           SC +  +G       VG+IREV+VVSGLPASTS E LE+LD+EK ILSFRV+GGEHRLNN
Sbjct: 84  SCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNN 143

Query: 825 YRSVTSVNEF-----NKDGKVYTVVLESYIVDIPEGNTGEDTKMFVDTVIKLNLQKLAGV 878
           YRSVTSVNEF     +K  +VY+VVLESYIVDIP+GNT EDT+MFVDTV+K NLQ LA +
Sbjct: 144 YRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVI 203

The following BLAST results are available for this feature:

BLAST of Lsi04G014330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944K3	3.7e-136	64.92	Histone deacetylase 2 OS=Arabidopsis thaliana OX=3702 GN=HDA2 PE=2 SV=2	[more]
Q9GKU5	1.0e-93	53.37	Histone deacetylase 11 OS=Macaca fascicularis OX=9541 GN=HDAC11 PE=2 SV=2	[more]
Q96DB2	3.9e-93	53.07	Histone deacetylase 11 OS=Homo sapiens OX=9606 GN=HDAC11 PE=1 SV=1	[more]
Q91WA3	2.5e-92	52.92	Histone deacetylase 11 OS=Mus musculus OX=10090 GN=Hdac11 PE=1 SV=1	[more]
F4ITL6	8.5e-88	63.80	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of Lsi04G014330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9B1	2.0e-177	91.45	Histone deacetylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G...	[more]
A0A1S3BUF6	2.0e-177	91.45	Histone deacetylase OS=Cucumis melo OX=3656 GN=LOC103493650 PE=4 SV=1	[more]
A0A0A0L030	2.5e-175	90.57	Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_4G645990 PE=4 SV=1	[more]
A0A6J1CF45	6.2e-166	85.71	Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111010925 PE=4 SV=1	[more]
A0A6J1J4E1	2.9e-163	85.17	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111481226 PE=4 SV=1	[more]

BLAST of Lsi04G014330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037723.1	0.0e+00	73.39	Histone deacetylase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608382.1	6.2e-253	72.10	Histone deacetylase 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008452709.1	4.2e-177	91.45	PREDICTED: histone deacetylase 2 [Cucumis melo] >KAA0064492.1 histone deacetylas...	[more]
XP_038899967.1	2.3e-175	90.57	histone deacetylase 2 isoform X2 [Benincasa hispida]	[more]
XP_004141312.1	5.2e-175	90.57	histone deacetylase 2 isoform X2 [Cucumis sativus] >KGN55325.1 hypothetical prot...	[more]

BLAST of Lsi04G014330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26040.2	2.7e-137	64.92	histone deacetylase 2	[more]
AT5G26040.1	7.3e-119	59.16	histone deacetylase 2	[more]
AT2G26070.1	6.0e-89	63.80	Protein of unknown function (DUF778)	[more]
AT2G26040.1	3.4e-68	70.65	PYR1-like 2	[more]
AT1G73000.1	3.1e-61	65.22	PYR1-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase family	PRINTS	PR01270	HDASUPER	coord: 456..479 score: 36.14 coord: 552..562 score: 41.61 coord: 490..505 score: 52.04
IPR037138	Histone deacetylase domain superfamily	GENE3D	3.40.800.20	Histone deacetylase domain	coord: 335..661 e-value: 5.8E-56 score: 192.0
IPR019587	Polyketide cyclase/dehydrase	PFAM	PF10604	Polyketide_cyc2	coord: 736..873 e-value: 2.6E-14 score: 53.7
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 693..882 e-value: 4.5E-88 score: 295.9
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 352..531 e-value: 4.1E-32 score: 111.8
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 44..93 e-value: 3.1E-20 score: 73.4 coord: 94..179 e-value: 3.1E-22 score: 79.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 639..660
None	No IPR available	PANTHER	PTHR43497	HISTONE DEACETYLASE 11	coord: 308..631
None	No IPR available	PANTHER	PTHR43497:SF2	HISTONE DEACETYLASE 11	coord: 308..631
None	No IPR available	CDD	cd07821	PYR_PYL_RCAR_like	coord: 732..874 e-value: 8.14615E-32 score: 118.966
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 732..875
IPR044150	Histone deacetylase 11	CDD	cd09993	HDAC_classIV	coord: 352..620 e-value: 8.64877E-120 score: 362.586
IPR023696	Ureohydrolase domain superfamily	SUPERFAMILY	52768	Arginase/deacetylase	coord: 330..615

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014330.1	Lsi04G014330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0016575	histone deacetylation
cellular_component	GO:0000118	histone deacetylase complex
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function	GO:0004407	histone deacetylase activity