Lsi04G014320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G014320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein conserved in the green lineage and diatoms 27, chloroplastic
Location	chr04: 22056438 .. 22057624 (+)
RNA-Seq Expression	Lsi04G014320
Synteny	Lsi04G014320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATTTTTGGGCAACCAAAAACAGAGGAAAAACCGTTGGCCGGTCGTCGGGAACCAAACACATATGGCCGGAGTCATGTACATACTCCAGGTAAAACCGCCGCCGCCGACTTTTCTTCCGTCCGTGCCGAACTCCGGCCCACTAATTTCACCGTTCAGAAACCCTAGACCTCTCCACCTCCGAAATTCCGTTTCTAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAATAACGTGCCACCGGAAACCGACTGCCCTGTCCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCGCTCTTCATCGGACTGCCAGTTGCTTGGTTCGGCACCGTGGGAATCGAATCGGATCCATTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCAGTTGTTAGGATGTATCTCGGTTGGGCTTACATCGGTAACCGTCTCCTCAGTGCGACTGTCGAATGTAAATCCTCATTTCTGTGTTCTTACTATTAACCCTAAAATCGCAGTTCTTCGTTCAAAGATAGTACTGGATTCTTTACTCTTCATATCTAGTGAAAACATAAAAATTAATCATCGTTCTGAAAATTTCCTTTATACAGACGAAGAAACCGGATGGTACGACGGGCAGGTACACTCAGAAAGTTCTTCTTCTTCTTCTCATAGGATCAAGGTTCCATTTCATCTCTGAAATTAAGAGCTTATGTTTGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTAAGTAACCGAATTCTATTTAGACTTCCATAAATCCAAGTTTCAATTACGATTTGGAAATCTTATGGCGTATGAAACAGGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCGTCTTTGTTTGTGTCCATTGTTGTGCTCATCAACATTGATGGAGGCCAATTGCTAGGGCCTTTCTTCACCGGAAAATCTGCAGAAGATGACGGTGGCGGCAGAGTAATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCCGATGCGTTCTGTGGGCCTGGGGAACCTGATTTTCTTCAA

mRNA sequence

GGAATTTTTGGGCAACCAAAAACAGAGGAAAAACCGTTGGCCGGTCGTCGGGAACCAAACACATATGGCCGGAGTCATGTACATACTCCAGGTAAAACCGCCGCCGCCGACTTTTCTTCCGTCCGTGCCGAACTCCGGCCCACTAATTTCACCGTTCAGAAACCCTAGACCTCTCCACCTCCGAAATTCCGTTTCTAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAATAACGTGCCACCGGAAACCGACTGCCCTGTCCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCGCTCTTCATCGGACTGCCAGTTGCTTGGTTCGGCACCGTGGGAATCGAATCGGATCCATTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCAGTTGTTAGGATGTATCTCGGTTGGGCTTACATCGGTAACCGTCTCCTCAGTGCGACTACGAAGAAACCGGATGGTACGACGGGCAGGTACACTCAGAAAGTTCTTCTTCTTCTTCTCATAGGATCAAGGTTCCATTTCATCTCTGAAATTAAGAGCTTATGTTTGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCGTCTTTGTTTGTGTCCATTGTTGTGCTCATCAACATTGATGGAGGCCAATTGCTAGGGCCTTTCTTCACCGGAAAATCTGCAGAAGATGACGGTGGCGGCAGAGTAATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCCGATGCGTTCTGTGGGCCTGGGGAACCTGATTTTCTTCAA

Coding sequence (CDS)

ATGGCCGGAGTCATGTACATACTCCAGGTAAAACCGCCGCCGCCGACTTTTCTTCCGTCCGTGCCGAACTCCGGCCCACTAATTTCACCGTTCAGAAACCCTAGACCTCTCCACCTCCGAAATTCCGTTTCTAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAATAACGTGCCACCGGAAACCGACTGCCCTGTCCCGCCGGAACAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCCGCTGGAGACATCGTTGAGTACTGTTCTCGATTGGTCGCCACCGGCGCTTCCTTCGCGCTCTTCATCGGACTGCCAGTTGCTTGGTTCGGCACCGTGGGAATCGAATCGGATCCATTGAAACGATTTCTTTGCGCTGTTTCGAGTGGGATTTTGTTCGTCACGATTGCAGTTGTTAGGATGTATCTCGGTTGGGCTTACATCGGTAACCGTCTCCTCAGTGCGACTACGAAGAAACCGGATGGTACGACGGGCAGGTACACTCAGAAAGTTCTTCTTCTTCTTCTCATAGGATCAAGGTTCCATTTCATCTCTGAAATTAAGAGCTTATGTTTGCAGATTTGGGTAAAAACCGCCCAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCGTCTTTGTTTGTGTCCATTGTTGTGCTCATCAACATTGATGGAGGCCAATTGCTAGGGCCTTTCTTCACCGGAAAATCTGCAGAAGATGACGGTGGCGGCAGAGTAATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCCGATGCGTTCTGTGGGCCTGGGGAACCTGATTTTCTTCAA

Protein sequence

MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFLQ

Homology

[Close]

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 47  SLSFSFRKGNNVPPETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASF 106
           S+SFS   G +  P ++  VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 107 ALFIGLPVAWFGTVGIESDPLKRFLCAVSSGILF-VTIAVVRMYLGWAYIGNRLLSATTK 166
              +G+PVA   +     +PL RF+ A  +G LF V++ V+R+YLGW+Y+G+RLLSA   
Sbjct: 130 FTVLGVPVA-AASFNPSREPL-RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVI- 189

Query: 167 KPDGTTGRYTQKVLLLLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLS 226
            P   +G Y                         Q+WVK  +VLARDRLLGSY VKPV+ 
Sbjct: 190 -PYEESGWYDG-----------------------QMWVKPPEVLARDRLLGSYKVKPVIK 240

Query: 227 RLKYTLVSLAASLFVSIVVLI 247
            LK TL+   A L  + V+ +
Sbjct: 250 MLKQTLIGTGALLVSAFVLFV 240

[Close]

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.5e-17
Identity = 59/170 (34.71%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 62  TDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG 121
           T CP+P EQ P+NEYQ L+ S  F+W +  +  Y   L  T  S    +   + ++  + 
Sbjct: 3   TFCPIPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLF-TIYSIGFLLTFLITFYNDLF 62

Query: 122 IESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLL 181
           I   P+  F+  +  G   + + ++R+YLGW+YI  RLLSAT    +  +G Y       
Sbjct: 63  I-VHPVNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEE--SGWYDG----- 122

Query: 182 LLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTL 232
                             QIWVK+++VL +DRL+G Y V+PVL+RLK TL
Sbjct: 123 ------------------QIWVKSSEVLIQDRLIGIYQVRPVLNRLKQTL 145

[Close]

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 55/172 (31.98%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 64  CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIE 123
           CPVP EQ P+NEY +L  S+ F W       Y  ++  T  +   F+  PV       I 
Sbjct: 8   CPVPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKITITLIA-TCFLVSPVL-LSIFPIA 67

Query: 124 SDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLL 183
             PLK F        L     ++R+YLGW+Y+  RL+SAT                    
Sbjct: 68  KLPLKFFFSEFIISSLITCFILIRLYLGWSYVVKRLMSATV------------------- 127

Query: 184 IGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLA 236
                 F  E      QIWVK +++L +DR +G Y V P+L+++K TL  L+
Sbjct: 128 ------FYEESGWYDGQIWVKPSEILVKDRFIGLYEVFPLLNKIKNTLSCLS 152

[Close]

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.2e-13
Identity = 58/185 (31.35%), Postives = 84/185 (45.41%), Query Frame = 0


Query: 62  TDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG 121
           T CPVP EQ P++EY +L  S+ F W       Y  ++        L +  P+       
Sbjct: 6   TQCPVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVS-PIL-LSIFP 65

Query: 122 IESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLL 181
           I   PLK F     +  L     ++R+YLGW+Y+  RL+SAT                  
Sbjct: 66  ITKLPLKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATV----------------- 125

Query: 182 LLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVS 241
                   F  E      QIWVK +++L +DR +G Y V P+L+++K TL  L  SL +S
Sbjct: 126 --------FYEESGWYDGQIWVKPSEILLKDRFIGLYEVFPLLNKIKNTLSFL--SLMIS 161

Query: 242 IVVLI 247
             VL+
Sbjct: 186 GPVLL 161

[Close]

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 51/166 (30.72%), Postives = 72/166 (43.37%), Query Frame = 0


Query: 63  DCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGI 122
           +CPVP  QLPINEY  L++++ FSWA      Y   L+       LF  +       +  
Sbjct: 2   NCPVPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCI------CLNF 61

Query: 123 ESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLL 182
                +  L ++    LF+ +  +R YLG+ YI  RLL +    P   +  Y        
Sbjct: 62  LDSKYETGLYSLILSTLFICLICLRTYLGFRYIYVRLLKSAL--PYEESSWYDG------ 121

Query: 183 LIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLK 229
                            Q+WVK    L +DRL+  YTV P+LSRLK
Sbjct: 122 -----------------QVWVKNINYLIKDRLVADYTVLPILSRLK 136

[Close]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL
Match: A0A5D3D958 (DUF1230 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002200 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.4e-124
Identity = 237/294 (80.61%), Postives = 248/294 (84.35%), Query Frame = 0


Query: 5   MYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDC 64
           MYIL    PPPTFL S PNS PLI PF N RPLHLRNSVSRISLSFSFRKG+NVPPET C
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 65  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIES 124
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG+ES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 125 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLI 184
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y          
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG-------- 180

Query: 185 GSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVV 244
                          QIWVKTAQVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVV
Sbjct: 181 ---------------QIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVV 240

Query: 245 LINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFL 299
           LINIDGG+LLGPFFTGKSA ++ GGRV+PG+YSDESARSFEPDAFCGPGE D L
Sbjct: 241 LINIDGGELLGPFFTGKSAANEDGGRVVPGIYSDESARSFEPDAFCGPGELDLL 269

[Close]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL
Match: A0A1S3BTX6 (uncharacterized protein ycf36 OS=Cucumis melo OX=3656 GN=LOC103493654 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 4.4e-124
Identity = 237/294 (80.61%), Postives = 248/294 (84.35%), Query Frame = 0


Query: 5   MYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDC 64
           MYIL    PPPTFL S PNS PLI PF N RPLHLRNSVSRISLSFSFRKG+NVPPET C
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 65  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIES 124
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG+ES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 125 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLI 184
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y          
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG-------- 180

Query: 185 GSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVV 244
                          QIWVKTAQVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVV
Sbjct: 181 ---------------QIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVV 240

Query: 245 LINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFL 299
           LINIDGG+LLGPFFTGKSA ++ GGRV+PG+YSDESARSFEPDAFCGPGE D L
Sbjct: 241 LINIDGGELLGPFFTGKSAANEDGGRVVPGIYSDESARSFEPDAFCGPGELDLL 269

[Close]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL
Match: A0A6J1CQK2 (uncharacterized protein ycf36 OS=Momordica charantia OX=3673 GN=LOC111013808 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.6e-121
Identity = 232/294 (78.91%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 1   MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPP 60
           MAGVMYI+    PP  F PS PN  P+ISPF NPRPLHLRNS+SRISLSFSFRKGNN+PP
Sbjct: 1   MAGVMYIVPANAPPRAFFPSAPNFRPIISPFINPRPLHLRNSLSRISLSFSFRKGNNMPP 60

Query: 61  ETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120
           ET CPVPPEQ PINEYQTLSTSFPFSWA+GDIVEYCSRLVATGASFALF+GLP+ WFGTV
Sbjct: 61  ETGCPVPPEQQPINEYQTLSTSFPFSWASGDIVEYCSRLVATGASFALFVGLPITWFGTV 120

Query: 121 GIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLL 180
           G+ESDPLKR LCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y      
Sbjct: 121 GVESDPLKRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG---- 180

Query: 181 LLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV 240
                              QIWVKTAQVLARDRLLGSYTVKPVL+RLKYTLV+LAASLFV
Sbjct: 181 -------------------QIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVTLAASLFV 240

Query: 241 SIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGE 295
           SIVVLINIDGGQLLGP FTGKSAE D GGRVIPGVYSDESARSFEPDAFCGPGE
Sbjct: 241 SIVVLINIDGGQLLGPLFTGKSAEVD-GGRVIPGVYSDESARSFEPDAFCGPGE 268

[Close]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL
Match: A0A0A0L3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 6.0e-121
Identity = 234/294 (79.59%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 5   MYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDC 64
           MYIL     PPTFL SVPNS PLISPF N R LHLRNSVSR+ LSFSFRKG+NVPPET C
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 65  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIES 124
           PVPPEQLPINEYQTLS SFPFSWAAGDIVE+CSRLVATGASFALFIGLPVAWFGTVG+ES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 125 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLI 184
           DPLK  LCAVSSGILFVTIAV+RMYLGWAY+GNRLLSAT +  +  TG Y          
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEE--TGWYDG-------- 180

Query: 185 GSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVV 244
                          QIWVKTAQVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVV
Sbjct: 181 ---------------QIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVV 240

Query: 245 LINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFL 299
           LINIDGG+LLGPFFTGKSA +DGGGRVIPGVYSDESARSFEPDAFCGPGE D L
Sbjct: 241 LINIDGGELLGPFFTGKSAANDGGGRVIPGVYSDESARSFEPDAFCGPGEHDLL 269

[Close]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL
Match: A0A6J1FDI1 (uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443023 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.3e-119
Identity = 229/292 (78.42%), Postives = 238/292 (81.51%), Query Frame = 0


Query: 5   MYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDC 64
           MYIL  KP P TF PS PN  PLISPF+NPRP HLRNS SRISLSFSFRKGNN+P +T C
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 65  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIES 124
           PVPPEQLPINEYQTLSTSFPFSWA GDIVEYCSRLVATGASFALFIGLPVAWFGTVG+ES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 125 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLI 184
           DPL R LCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y          
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG-------- 180

Query: 185 GSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVV 244
                          QIWVKTA+VLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSI+V
Sbjct: 181 ---------------QIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIV 240

Query: 245 LINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPD 297
           LINIDG QLLGPFFTGK A DD   RVIPGVYSDESARSFEPDAFCG GE D
Sbjct: 241 LINIDGSQLLGPFFTGKYAADDSSSRVIPGVYSDESARSFEPDAFCGRGEDD 267

[Close]

BLAST of Lsi04G014320 vs. NCBI nr
Match: XP_038898551.1 (uncharacterized protein ycf36 isoform X3 [Benincasa hispida])

HSP 1 Score: 474.2 bits (1219), Expect = 8.5e-130
Identity = 246/299 (82.27%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 1   MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPP 60
           M GV+YIL  K PP TFLPS PNS P ISPF+NP PLHLRNSVSRISLSFSFRKG+N+PP
Sbjct: 1   MTGVLYILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPP 60

Query: 61  ETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120
           ET CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV
Sbjct: 61  ETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120

Query: 121 GIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLL 180
           G+ESDPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y      
Sbjct: 121 GVESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWY------ 180

Query: 181 LLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV 240
                       + +SLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV
Sbjct: 181 ------------DGQSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV 240

Query: 241 SIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFLQ 300
           SIVVL+NIDGGQLLGPFFTGK A DDG GRVIPGVYSDESARSFEPDAFCG GE D +Q
Sbjct: 241 SIVVLVNIDGGQLLGPFFTGKYAADDGSGRVIPGVYSDESARSFEPDAFCGAGEADLVQ 279

[Close]

BLAST of Lsi04G014320 vs. NCBI nr
Match: XP_038898549.1 (uncharacterized protein ycf36 isoform X1 [Benincasa hispida])

HSP 1 Score: 474.2 bits (1219), Expect = 8.5e-130
Identity = 247/302 (81.79%), Postives = 258/302 (85.43%), Query Frame = 0


Query: 1   MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPP 60
           M GV+YIL  K PP TFLPS PNS P ISPF+NP PLHLRNSVSRISLSFSFRKG+N+PP
Sbjct: 1   MTGVLYILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPP 60

Query: 61  ETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120
           ET CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV
Sbjct: 61  ETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120

Query: 121 GIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTK---KPDGTTGRYTQK 180
           G+ESDPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +     D  TG Y   
Sbjct: 121 GVESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYFLYTDEETGWY--- 180

Query: 181 VLLLLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS 240
                          + +SLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS
Sbjct: 181 ---------------DGQSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS 240

Query: 241 LFVSIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDF 300
           LFVSIVVL+NIDGGQLLGPFFTGK A DDG GRVIPGVYSDESARSFEPDAFCG GE D 
Sbjct: 241 LFVSIVVLVNIDGGQLLGPFFTGKYAADDGSGRVIPGVYSDESARSFEPDAFCGAGEADL 284

[Close]

BLAST of Lsi04G014320 vs. NCBI nr
Match: XP_038898550.1 (uncharacterized protein ycf36 isoform X2 [Benincasa hispida])

HSP 1 Score: 464.2 bits (1193), Expect = 8.8e-127
Identity = 243/302 (80.46%), Postives = 252/302 (83.44%), Query Frame = 0


Query: 1   MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPP 60
           M GV+YIL  K PP TFLPS PNS P ISPF+NP PLHLRNSVSRISLSFSFRKG+N+PP
Sbjct: 1   MTGVLYILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPP 60

Query: 61  ETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120
           ET CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV
Sbjct: 61  ETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120

Query: 121 GIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTK---KPDGTTGRYTQK 180
           G+ESDPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +     D  TG Y   
Sbjct: 121 GVESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYFLYTDEETGWYDG- 180

Query: 181 VLLLLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS 240
                                 QIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS
Sbjct: 181 ----------------------QIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAAS 240

Query: 241 LFVSIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDF 300
           LFVSIVVL+NIDGGQLLGPFFTGK A DDG GRVIPGVYSDESARSFEPDAFCG GE D 
Sbjct: 241 LFVSIVVLVNIDGGQLLGPFFTGKYAADDGSGRVIPGVYSDESARSFEPDAFCGAGEADL 279

[Close]

BLAST of Lsi04G014320 vs. NCBI nr
Match: XP_038898552.1 (uncharacterized protein ycf36 isoform X4 [Benincasa hispida])

HSP 1 Score: 464.2 bits (1193), Expect = 8.8e-127
Identity = 242/299 (80.94%), Postives = 252/299 (84.28%), Query Frame = 0


Query: 1   MAGVMYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPP 60
           M GV+YIL  K PP TFLPS PNS P ISPF+NP PLHLRNSVSRISLSFSFRKG+N+PP
Sbjct: 1   MTGVLYILPGKAPPRTFLPSGPNSRPSISPFKNPGPLHLRNSVSRISLSFSFRKGSNMPP 60

Query: 61  ETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120
           ET CPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV
Sbjct: 61  ETGCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTV 120

Query: 121 GIESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLL 180
           G+ESDPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y      
Sbjct: 121 GVESDPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG---- 180

Query: 181 LLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV 240
                              QIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV
Sbjct: 181 -------------------QIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFV 240

Query: 241 SIVVLINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFLQ 300
           SIVVL+NIDGGQLLGPFFTGK A DDG GRVIPGVYSDESARSFEPDAFCG GE D +Q
Sbjct: 241 SIVVLVNIDGGQLLGPFFTGKYAADDGSGRVIPGVYSDESARSFEPDAFCGAGEADLVQ 274

[Close]

BLAST of Lsi04G014320 vs. NCBI nr
Match: XP_008452715.1 (PREDICTED: uncharacterized protein ycf36 [Cucumis melo] >KAA0064494.1 DUF1230 domain-containing protein [Cucumis melo var. makuwa] >TYK20096.1 DUF1230 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.1 bits (1167), Expect = 9.1e-124
Identity = 237/294 (80.61%), Postives = 248/294 (84.35%), Query Frame = 0


Query: 5   MYILQVKPPPPTFLPSVPNSGPLISPFRNPRPLHLRNSVSRISLSFSFRKGNNVPPETDC 64
           MYIL    PPPTFL S PNS PLI PF N RPLHLRNSVSRISLSFSFRKG+NVPPET C
Sbjct: 1   MYILLGTAPPPTFLLSAPNSRPLILPFTNTRPLHLRNSVSRISLSFSFRKGSNVPPETGC 60

Query: 65  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIES 124
           PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVG+ES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 125 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLI 184
           DPLKRFLCAVSSGILFVTIAVVRMYLGWAY+GNRLLSAT +  +  TG Y          
Sbjct: 121 DPLKRFLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG-------- 180

Query: 185 GSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVV 244
                          QIWVKTAQVLARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSIVV
Sbjct: 181 ---------------QIWVKTAQVLARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVV 240

Query: 245 LINIDGGQLLGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFL 299
           LINIDGG+LLGPFFTGKSA ++ GGRV+PG+YSDESARSFEPDAFCGPGE D L
Sbjct: 241 LINIDGGELLGPFFTGKSAANEDGGRVVPGIYSDESARSFEPDAFCGPGELDLL 269

[Close]

BLAST of Lsi04G014320 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 248.4 bits (633), Expect = 7.1e-66
Identity = 141/285 (49.47%), Postives = 181/285 (63.51%), Query Frame = 0


Query: 22  PNSGPLISPFRNPRPLH--------LRNSVSRISLSFSFRKGNNVPPETDCPVPPEQLPI 81
           P +  L  P R+ R LH        L++S+ +     S  +     PETDCPVPPEQ PI
Sbjct: 11  PITSSLKPPSRHRRFLHHNLSPKTPLQSSLIKFGAENSEPQPPRPLPETDCPVPPEQQPI 70

Query: 82  NEYQTLSTSFPFSWAAGDIVEYCSRLVATGASFALFIGLPVAWFGTVGIESDPLKRFLCA 141
           NEYQ+LSTSFPFSWA+GD++EY +RL  TGASFA F+GLPV+WFG++G E +P+KR L A
Sbjct: 71  NEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEYEPVKRILAA 130

Query: 142 VSSGILFVTIAVVRMYLGWAYIGNRLLSATTKKPDGTTGRYTQKVLLLLLIGSRFHFISE 201
            SSGI  VT+AVVRMYLGWAY+GNRLLSAT +  +  TG Y                   
Sbjct: 131 SSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEE--TGWYDG----------------- 190

Query: 202 IKSLCLQIWVKTAQVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIVVLINIDGGQL 261
                 Q+WVKT +VLARDRLLGS++VKPVL+RLK TLV L     +S++++IN+    +
Sbjct: 191 ------QVWVKTPEVLARDRLLGSFSVKPVLARLKNTLVILG----LSLILVINLGDSPI 250

Query: 262 LGPFFTGKSAEDDGGGRVIPGVYSDESARSFEPDAFCGPGEPDFL 299
              + T +    D     IPG Y+DE+AR+FEP+AFCG    D L
Sbjct: 251 ATSYRTYRDPR-DRSSLPIPGAYNDETARTFEPEAFCGEPSSDLL 265

[Close]

BLAST of Lsi04G014320 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22
Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 0


Query: 47  SLSFSFRKGNNVPPETDCPVPPEQLPINEYQTLSTSFPFSWAAGDIVEYCSRLVATGASF 106
           S+SFS   G +  P ++  VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 107 ALFIGLPVAWFGTVGIESDPLKRFLCAVSSGILF-VTIAVVRMYLGWAYIGNRLLSATTK 166
              +G+PVA   +     +PL RF+ A  +G LF V++ V+R+YLGW+Y+G+RLLSA   
Sbjct: 130 FTVLGVPVA-AASFNPSREPL-RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVI- 189

Query: 167 KPDGTTGRYTQKVLLLLLIGSRFHFISEIKSLCLQIWVKTAQVLARDRLLGSYTVKPVLS 226
            P   +G Y                         Q+WVK  +VLARDRLLGSY VKPV+ 
Sbjct: 190 -PYEESGWYDG-----------------------QMWVKPPEVLARDRLLGSYKVKPVIK 240

Query: 227 RLKYTLVSLAASLFVSIVVLI 247
            LK TL+   A L  + V+ +
Sbjct: 250 MLKQTLIGTGALLVSAFVLFV 240

The following BLAST results are available for this feature:

BLAST of Lsi04G014320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	1.8e-21	36.82	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P48276	4.5e-17	34.71	Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1	[more]
P51273	1.0e-13	31.98	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]
Q1XDL3	5.2e-13	31.35	Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1	[more]
O78501	1.8e-10	30.72	Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1	[more]

BLAST of Lsi04G014320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D958	4.4e-124	80.61	DUF1230 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BTX6	4.4e-124	80.61	uncharacterized protein ycf36 OS=Cucumis melo OX=3656 GN=LOC103493654 PE=4 SV=1	[more]
A0A6J1CQK2	1.6e-121	78.91	uncharacterized protein ycf36 OS=Momordica charantia OX=3673 GN=LOC111013808 PE=...	[more]
A0A0A0L3Z3	6.0e-121	79.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1	[more]
A0A6J1FDI1	3.3e-119	78.42	uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lsi04G014320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898551.1	8.5e-130	82.27	uncharacterized protein ycf36 isoform X3 [Benincasa hispida]	[more]
XP_038898549.1	8.5e-130	81.79	uncharacterized protein ycf36 isoform X1 [Benincasa hispida]	[more]
XP_038898550.1	8.8e-127	80.46	uncharacterized protein ycf36 isoform X2 [Benincasa hispida]	[more]
XP_038898552.1	8.8e-127	80.94	uncharacterized protein ycf36 isoform X4 [Benincasa hispida]	[more]
XP_008452715.1	9.1e-124	80.61	PREDICTED: uncharacterized protein ycf36 [Cucumis melo] >KAA0064494.1 DUF1230 do...	[more]

BLAST of Lsi04G014320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11840.1	7.1e-66	49.47	Protein of unknown function (DUF1230)	[more]
AT5G67370.1	1.3e-22	36.82	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 64..163 e-value: 2.7E-26 score: 92.4 coord: 200..232 e-value: 1.5E-8 score: 34.8
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 17..166
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 200..296
None	No IPR available	PANTHER	PTHR34214:SF1	OS05G0539900 PROTEIN	coord: 17..166
None	No IPR available	PANTHER	PTHR34214:SF1	OS05G0539900 PROTEIN	coord: 200..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G014320.1	Lsi04G014320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid