Lsi04G013990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G013990
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPlant regulator RWP-RK
Locationchr04: 21780036 .. 21781656 (+)
RNA-Seq ExpressionLsi04G013990
SyntenyLsi04G013990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAATCTTCAAACAGTTGTTTGTGTCAAAAAGGTGAAGCAAGAAGCTGCGGAGGATTGGGACGAGACGATGCCGTTACCTGGAGATGTAATTGAAGGGGTTGCAGAAGGCGATGACGATGAGCTGTTCATATCGGCCAAAGCCAAGGCTGATCTCAGTTCGCATCTGGGCAAGATCAGCCAACAGTTTGAGATTGTGTGGTTGAAGGTGAAGCGTGGAGATGCCACACTTAAGCTTCGAGCACGCATCATCCAAGAGAAGGCATCAATTTTGCACAGAAAATTCACCATCCGGGCGGCAACTGATGATCGACATGTCGCGATACTCGGGGATCTCACCTTGGACCAGTGCTGTGAACTGCAAGGTGAGTTTGCTTTACTCCATTGTTGTTTTATAAGGTGCCAACTTGAATTGAAAACATAAATTGATGTTGCAGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTTAACAGAAGAGGTGTAAAGTATGAATGGAGCAAGAAACTTGACGTGCATCTTCCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCATGCCGCTGAAAGGCGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTGGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAACTCAGGTGATACGCATATCGACTTCATTTTCGTAGACCTTAACTCCGGTCGCTCCTTAACATCCCATCTGCAAATCCAATGTCGTTTCTCACTTGCTAGTTTGTTTAAAAAAATTCTTCATATGAAGGAGAAAAATCGGAACACAGGAAAAGAATCATGGTGGAGCAAGCAGCAAACCAACACTTCAAACCTGCAGGTTGTGCATGGAATAAGGCTATGGTTTCTACCTGGAGTATCAGAAGTTGCACTTGAAATGATTCCTGCACCGGGGGAAGTTCGTTTCGGAATGGATATCCAAAGAACCGAAGAGGTAATTAGAGACCCAATTTGTAACGTTCCTGTTTTCTGTTTCACATTCTTTGTTTCATAGTTCAGTTACATGAAGAAATAAGAAACTAAAGAGAGTAATAATACAGAAACGATGAAGAAAATCACATTTCATTAAGAACAGCAATTAAGAAACAGGAAAAATAGACTAAACAACAAGGCCTGATTAACTTTTTCAAGTTTTTCAAGAAAACTTGTATTACTGAAGAAATCCAAATATGCTTACAAGAAAAACTAAGAGACCTGATGCCTGCTGGCGTTTTGATGCAGGGTTTCATCTGTGTCAGTTCGGTGACAAAAGGTTCCGCGGCTGACCGTTGTGGGCTTGGCAGCCTCTTGGAAGAGGCAAAGGCAACCAACTATCTCCTGTTGATTTCCCGATTAGAAGGAAAGAGCGTAATCCCATCAAACGTAAGCTCTACTGGCCTAATTCACTGCTGTGACCAAGCCGAGATAAGAAGCACTCTTGTTTCTGCAATGGATAGAATGGATACTGTGAGACTCCATATCATGGCTTTGCCTGATAGTTCTGATGCTCAAGCAAATGAAACCTCTAATAATAAGCTTCAAACAACCCGAAAATTTCTCCCTTAA

mRNA sequence

ATGATTGTTTGTGTCAAAAAGGTGAAGCAAGAAGCTGCGGAGGATTGGGACGAGACGATGCCGTTACCTGGAGATGTAATTGAAGGGGTTGCAGAAGGCGATGACGATGAGCTGTTCATATCGGCCAAAGCCAAGGCTGATCTCAGTTCGCATCTGGGCAAGATCAGCCAACAGTTTGAGATTGTGTGGTTGAAGGTGAAGCGTGGAGATGCCACACTTAAGCTTCGAGCACGCATCATCCAAGAGAAGGCATCAATTTTGCACAGAAAATTCACCATCCGGGCGGCAACTGATGATCGACATGTCGCGATACTCGGGGATCTCACCTTGGACCAGTGCTGTGAACTGCAAGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTTAACAGAAGAGGTGTAAAGTATGAATGGAGCAAGAAACTTGACGTGCATCTTCCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCATGCCGCTGAAAGGCGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTGGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAACTCAGGAGAAAAATCGGAACACAGGAAAAGAATCATGGTGGAGCAAGCAGCAAACCAACACTTCAAACCTGCAGGTTGTGCATGGAATAAGGCTATGGTTTCTACCTGGAGTATCAGAAGTTGCACTTGAAATGATTCCTGCACCGGGGGAAGTTCGTTTCGGAATGGATATCCAAAGAACCGAAGAGAAAACTTGTATTACTGAAGAAATCCAAATATGCTTACAAGAAAAACTAAGAGACCTGATGCCTGCTGGCGTTTTGATGCAGGGTTTCATCTGTGTCAGTTCGGTGACAAAAGGTTCCGCGGCTGACCGTTGTGGGCTTGGCAGCCTCTTGGAAGAGGCAAAGGCAACCAACTATCTCCTGTTGATTTCCCGATTAGAAGGAAAGAGCGTAATCCCATCAAACGTAAGCTCTACTGGCCTAATTCACTGCTGTGACCAAGCCGAGATAAGAAGCACTCTTGTTTCTGCAATGGATAGAATGGATACTGTGAGACTCCATATCATGGCTTTGCCTGATAGTTCTGATGCTCAAGCAAATGAAACCTCTAATAATAAGCTTCAAACAACCCGAAAATTTCTCCCTTAA

Coding sequence (CDS)

ATGATTGTTTGTGTCAAAAAGGTGAAGCAAGAAGCTGCGGAGGATTGGGACGAGACGATGCCGTTACCTGGAGATGTAATTGAAGGGGTTGCAGAAGGCGATGACGATGAGCTGTTCATATCGGCCAAAGCCAAGGCTGATCTCAGTTCGCATCTGGGCAAGATCAGCCAACAGTTTGAGATTGTGTGGTTGAAGGTGAAGCGTGGAGATGCCACACTTAAGCTTCGAGCACGCATCATCCAAGAGAAGGCATCAATTTTGCACAGAAAATTCACCATCCGGGCGGCAACTGATGATCGACATGTCGCGATACTCGGGGATCTCACCTTGGACCAGTGCTGTGAACTGCAAGAAATGAGTAGAAGAATATCAAACCCGGATGGTGCAGAATTTAACAGAAGAGGTGTAAAGTATGAATGGAGCAAGAAACTTGACGTGCATCTTCCCGACCATCGTTCTTCGGTCATAAGCTCCATCCTGTTCATGCCGCTGAAAGGCGAGCACTCCATGGAGGCCACGACTAGCCGGTGTATGGCCTGGTTTTGTGCTGCAGTTTCTTCAGGAGCACCTCTGGTCTTTGTCAATATTCAATCAGAACAGATAGTTAATGTAACTCAGGAGAAAAATCGGAACACAGGAAAAGAATCATGGTGGAGCAAGCAGCAAACCAACACTTCAAACCTGCAGGTTGTGCATGGAATAAGGCTATGGTTTCTACCTGGAGTATCAGAAGTTGCACTTGAAATGATTCCTGCACCGGGGGAAGTTCGTTTCGGAATGGATATCCAAAGAACCGAAGAGAAAACTTGTATTACTGAAGAAATCCAAATATGCTTACAAGAAAAACTAAGAGACCTGATGCCTGCTGGCGTTTTGATGCAGGGTTTCATCTGTGTCAGTTCGGTGACAAAAGGTTCCGCGGCTGACCGTTGTGGGCTTGGCAGCCTCTTGGAAGAGGCAAAGGCAACCAACTATCTCCTGTTGATTTCCCGATTAGAAGGAAAGAGCGTAATCCCATCAAACGTAAGCTCTACTGGCCTAATTCACTGCTGTGACCAAGCCGAGATAAGAAGCACTCTTGTTTCTGCAATGGATAGAATGGATACTGTGAGACTCCATATCATGGCTTTGCCTGATAGTTCTGATGCTCAAGCAAATGAAACCTCTAATAATAAGCTTCAAACAACCCGAAAATTTCTCCCTTAA

Protein sequence

MIVCVKKVKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVKRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP
Homology
BLAST of Lsi04G013990 vs. ExPASy TrEMBL
Match: A0A5A7VBB9 (Plant regulator RWP-RK OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001890 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 2.0e-188
Identity = 343/400 (85.75%), Postives = 360/400 (90.00%), Query Frame = 0

Query: 2   IVCVKKVKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEI 61
           +VCVKKVKQEA EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+
Sbjct: 7   VVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEV 66

Query: 62  VWLKVKRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSR 121
           VWLKVKRGDATLKLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSR
Sbjct: 67  VWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSR 126

Query: 122 RISNPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 181
           RISN +G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWF
Sbjct: 127 RISNLNGGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWF 186

Query: 182 CAAVSSGAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPG 241
           CAAVSSGAPLVFVNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPG
Sbjct: 187 CAAVSSGAPLVFVNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPG 246

Query: 242 VSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSS 301
           VSEV LEMIPAPG+VRFGMDIQRTEE                           GFICVSS
Sbjct: 247 VSEVGLEMIPAPGDVRFGMDIQRTEE---------------------------GFICVSS 306

Query: 302 VTKGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 361
           VTKGSAADRCGLGSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV
Sbjct: 307 VTKGSAADRCGLGSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 366

Query: 362 SAMDRMDTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           SAMDRMD+VRLHIMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 367 SAMDRMDSVRLHIMALPDSSDAQANETS--KLQTTRKFVP 377

BLAST of Lsi04G013990 vs. ExPASy TrEMBL
Match: A0A1S4DZ94 (uncharacterized protein LOC103493899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493899 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 337/394 (85.53%), Postives = 354/394 (89.85%), Query Frame = 0

Query: 8   VKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVK 67
           +KQEA EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+VWLKVK
Sbjct: 38  LKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVK 97

Query: 68  RGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPD 127
           RGDATLKLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSRRISN +
Sbjct: 98  RGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLN 157

Query: 128 GAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSS 187
           G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSS
Sbjct: 158 GGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSS 217

Query: 188 GAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVAL 247
           GAPLVFVNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPGVSEV L
Sbjct: 218 GAPLVFVNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGL 277

Query: 248 EMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSA 307
           EMIPAPG+VRFGMDIQRTEE                           GFICVSSVTKGSA
Sbjct: 278 EMIPAPGDVRFGMDIQRTEE---------------------------GFICVSSVTKGSA 337

Query: 308 ADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 367
           ADRCGLGSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM
Sbjct: 338 ADRCGLGSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 397

Query: 368 DTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           D+VRLHIMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 398 DSVRLHIMALPDSSDAQANETS--KLQTTRKFVP 402

BLAST of Lsi04G013990 vs. ExPASy TrEMBL
Match: A0A1S4DZB9 (uncharacterized protein LOC103493899 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493899 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 2.1e-182
Identity = 333/388 (85.82%), Postives = 349/388 (89.95%), Query Frame = 0

Query: 14  EDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVKRGDATL 73
           EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+VWLKVKRGDATL
Sbjct: 2   EDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVKRGDATL 61

Query: 74  KLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPDGAEFNR 133
           KLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSRRISN +G EFNR
Sbjct: 62  KLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLNGGEFNR 121

Query: 134 RGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVF 193
           RGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVF
Sbjct: 122 RGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSSGAPLVF 181

Query: 194 VNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVALEMIPAP 253
           VNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPGVSEV LEMIPAP
Sbjct: 182 VNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGLEMIPAP 241

Query: 254 GEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSAADRCGL 313
           G+VRFGMDIQRTEE                           GFICVSSVTKGSAADRCGL
Sbjct: 242 GDVRFGMDIQRTEE---------------------------GFICVSSVTKGSAADRCGL 301

Query: 314 GSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDTVRLH 373
           GSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMD+VRLH
Sbjct: 302 GSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLH 360

Query: 374 IMALPDSSDAQANETSNNKLQTTRKFLP 402
           IMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 362 IMALPDSSDAQANETS--KLQTTRKFVP 360

BLAST of Lsi04G013990 vs. ExPASy TrEMBL
Match: A0A1S4DZA7 (uncharacterized protein LOC103493899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493899 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.8e-181
Identity = 334/394 (84.77%), Postives = 351/394 (89.09%), Query Frame = 0

Query: 8   VKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVK 67
           +KQEA EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+VWLKVK
Sbjct: 38  LKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVK 97

Query: 68  RGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPD 127
           RGDATLKLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSRRISN +
Sbjct: 98  RGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLN 157

Query: 128 GAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSS 187
           G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSS
Sbjct: 158 GGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSS 217

Query: 188 GAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVAL 247
           GAPLVFVNIQSEQIVN   +KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPGVSEV L
Sbjct: 218 GAPLVFVNIQSEQIVN---KKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGL 277

Query: 248 EMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSA 307
           EMIPAPG+VRFGMDIQRTEE                           GFICVSSVTKGSA
Sbjct: 278 EMIPAPGDVRFGMDIQRTEE---------------------------GFICVSSVTKGSA 337

Query: 308 ADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 367
           ADRCGLGSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM
Sbjct: 338 ADRCGLGSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 397

Query: 368 DTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           D+VRLHIMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 398 DSVRLHIMALPDSSDAQANETS--KLQTTRKFVP 399

BLAST of Lsi04G013990 vs. ExPASy TrEMBL
Match: A0A0A0L0T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646370 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.9e-181
Identity = 333/388 (85.82%), Postives = 348/388 (89.69%), Query Frame = 0

Query: 14  EDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVKRGDATL 73
           EDWDETMPLPGDVIEGVAEGD+DELF+SAKAKADLSS LG+I+QQFE+VWLKVKRGDATL
Sbjct: 2   EDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEVVWLKVKRGDATL 61

Query: 74  KLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPDGAEFNR 133
           KLRARIIQEKASIL RKFTIRAATDDRHVAILGDLTLDQC ELQEMSRRISN +G EFNR
Sbjct: 62  KLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSELQEMSRRISNLNGGEFNR 121

Query: 134 RGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVF 193
           +GVKYEWSKKLD +LPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVF
Sbjct: 122 KGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVF 181

Query: 194 VNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVALEMIPAP 253
           VNIQSEQIVNVTQ+KNRNT KESWWSKQQ NT +L+VVHGIRLWFLPGVSEV LEMIPAP
Sbjct: 182 VNIQSEQIVNVTQKKNRNTRKESWWSKQQYNTPSLRVVHGIRLWFLPGVSEVGLEMIPAP 241

Query: 254 GEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSAADRCGL 313
           G+VRFGMDIQRTEE                           GFICVSSVTKGSAADRCGL
Sbjct: 242 GDVRFGMDIQRTEE---------------------------GFICVSSVTKGSAADRCGL 301

Query: 314 GSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDTVRLH 373
           GSLLEEA +TNYLLLISRLEG+SVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMD+VRLH
Sbjct: 302 GSLLEEAMSTNYLLLISRLEGRSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLH 360

Query: 374 IMALPDSSDAQANETSNNKLQTTRKFLP 402
           IMALPDSSDAQANETS  KLQTTRKFLP
Sbjct: 362 IMALPDSSDAQANETS--KLQTTRKFLP 360

BLAST of Lsi04G013990 vs. NCBI nr
Match: XP_038896661.1 (uncharacterized protein LOC120084924 [Benincasa hispida])

HSP 1 Score: 679.5 bits (1752), Expect = 1.8e-191
Identity = 351/400 (87.75%), Postives = 360/400 (90.00%), Query Frame = 0

Query: 2   IVCVKKVKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEI 61
           +VCVKKVKQEA EDWDETMPLPGDVIEGVAEGD+DELFISAKAKADLSSHLGKI+QQFE+
Sbjct: 7   VVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFISAKAKADLSSHLGKINQQFEV 66

Query: 62  VWLKVKRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSR 121
           VWLKVKRGDATLKLRARIIQEKASIL RKFTIRAATDDRHVAILGDLTLDQC ELQEMSR
Sbjct: 67  VWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSELQEMSR 126

Query: 122 RISNPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 181
           RISN DG EFNRRGVKYEWSKKLD+HLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF
Sbjct: 127 RISNLDGKEFNRRGVKYEWSKKLDLHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 186

Query: 182 CAAVSSGAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPG 241
           CAAVSSGAPLVFVNIQ+EQIVNVTQ++NRNTGKESWWSKQQ NT NL+VVHGIRLWFLPG
Sbjct: 187 CAAVSSGAPLVFVNIQTEQIVNVTQKRNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPG 246

Query: 242 VSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSS 301
           VSEVALEMIP PGEVRFGMDIQRTEE                           GFICVSS
Sbjct: 247 VSEVALEMIPEPGEVRFGMDIQRTEE---------------------------GFICVSS 306

Query: 302 VTKGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 361
           VTKGSAADRCGLG LLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV
Sbjct: 307 VTKGSAADRCGLGRLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 366

Query: 362 SAMDRMDTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           SAMDRMD VRLHIMALPD SDAQANETS  KLQTTRKFLP
Sbjct: 367 SAMDRMDNVRLHIMALPDGSDAQANETS--KLQTTRKFLP 377

BLAST of Lsi04G013990 vs. NCBI nr
Match: KAA0064524.1 (Plant regulator RWP-RK [Cucumis melo var. makuwa] >TYK20066.1 Plant regulator RWP-RK [Cucumis melo var. makuwa])

HSP 1 Score: 668.3 bits (1723), Expect = 4.1e-188
Identity = 343/400 (85.75%), Postives = 360/400 (90.00%), Query Frame = 0

Query: 2   IVCVKKVKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEI 61
           +VCVKKVKQEA EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+
Sbjct: 7   VVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEV 66

Query: 62  VWLKVKRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSR 121
           VWLKVKRGDATLKLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSR
Sbjct: 67  VWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSR 126

Query: 122 RISNPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 181
           RISN +G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWF
Sbjct: 127 RISNLNGGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWF 186

Query: 182 CAAVSSGAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPG 241
           CAAVSSGAPLVFVNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPG
Sbjct: 187 CAAVSSGAPLVFVNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPG 246

Query: 242 VSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSS 301
           VSEV LEMIPAPG+VRFGMDIQRTEE                           GFICVSS
Sbjct: 247 VSEVGLEMIPAPGDVRFGMDIQRTEE---------------------------GFICVSS 306

Query: 302 VTKGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 361
           VTKGSAADRCGLGSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV
Sbjct: 307 VTKGSAADRCGLGSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 366

Query: 362 SAMDRMDTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           SAMDRMD+VRLHIMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 367 SAMDRMDSVRLHIMALPDSSDAQANETS--KLQTTRKFVP 377

BLAST of Lsi04G013990 vs. NCBI nr
Match: XP_011654193.1 (uncharacterized protein LOC105435315 [Cucumis sativus])

HSP 1 Score: 663.3 bits (1710), Expect = 1.3e-186
Identity = 343/400 (85.75%), Postives = 359/400 (89.75%), Query Frame = 0

Query: 2   IVCVKKVKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEI 61
           +VCVKKVKQEA EDWDETMPLPGDVIEGVAEGD+DELF+SAKAKADLSS LG+I+QQFE+
Sbjct: 7   VVCVKKVKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVSAKAKADLSSQLGRINQQFEV 66

Query: 62  VWLKVKRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSR 121
           VWLKVKRGDATLKLRARIIQEKASIL RKFTIRAATDDRHVAILGDLTLDQC ELQEMSR
Sbjct: 67  VWLKVKRGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAILGDLTLDQCSELQEMSR 126

Query: 122 RISNPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 181
           RISN +G EFNR+GVKYEWSKKLD +LPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF
Sbjct: 127 RISNLNGGEFNRKGVKYEWSKKLDQNLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWF 186

Query: 182 CAAVSSGAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPG 241
           CAAVSSGAPLVFVNIQSEQIVNVTQ+KNRNT KESWWSKQQ NT +L+VVHGIRLWFLPG
Sbjct: 187 CAAVSSGAPLVFVNIQSEQIVNVTQKKNRNTRKESWWSKQQYNTPSLRVVHGIRLWFLPG 246

Query: 242 VSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSS 301
           VSEV LEMIPAPG+VRFGMDIQRTEE                           GFICVSS
Sbjct: 247 VSEVGLEMIPAPGDVRFGMDIQRTEE---------------------------GFICVSS 306

Query: 302 VTKGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLV 361
           VTKGSAADRCGLGSLLEEA +TNYLLLISRLEG+SVIPSNVSSTGLIHCCDQAEIRSTLV
Sbjct: 307 VTKGSAADRCGLGSLLEEAMSTNYLLLISRLEGRSVIPSNVSSTGLIHCCDQAEIRSTLV 366

Query: 362 SAMDRMDTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           SAMDRMD+VRLHIMALPDSSDAQANETS  KLQTTRKFLP
Sbjct: 367 SAMDRMDSVRLHIMALPDSSDAQANETS--KLQTTRKFLP 377

BLAST of Lsi04G013990 vs. NCBI nr
Match: XP_016901311.1 (PREDICTED: uncharacterized protein LOC103493899 isoform X1 [Cucumis melo])

HSP 1 Score: 655.6 bits (1690), Expect = 2.8e-184
Identity = 337/394 (85.53%), Postives = 354/394 (89.85%), Query Frame = 0

Query: 8   VKQEAAEDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVK 67
           +KQEA EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+VWLKVK
Sbjct: 38  LKQEAMEDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVK 97

Query: 68  RGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPD 127
           RGDATLKLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSRRISN +
Sbjct: 98  RGDATLKLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLN 157

Query: 128 GAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSS 187
           G EFNRRGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSS
Sbjct: 158 GGEFNRRGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSS 217

Query: 188 GAPLVFVNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVAL 247
           GAPLVFVNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPGVSEV L
Sbjct: 218 GAPLVFVNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGL 277

Query: 248 EMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSA 307
           EMIPAPG+VRFGMDIQRTEE                           GFICVSSVTKGSA
Sbjct: 278 EMIPAPGDVRFGMDIQRTEE---------------------------GFICVSSVTKGSA 337

Query: 308 ADRCGLGSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 367
           ADRCGLGSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM
Sbjct: 338 ADRCGLGSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRM 397

Query: 368 DTVRLHIMALPDSSDAQANETSNNKLQTTRKFLP 402
           D+VRLHIMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 398 DSVRLHIMALPDSSDAQANETS--KLQTTRKFVP 402

BLAST of Lsi04G013990 vs. NCBI nr
Match: XP_016901313.1 (PREDICTED: uncharacterized protein LOC103493899 isoform X3 [Cucumis melo])

HSP 1 Score: 648.3 bits (1671), Expect = 4.4e-182
Identity = 333/388 (85.82%), Postives = 349/388 (89.95%), Query Frame = 0

Query: 14  EDWDETMPLPGDVIEGVAEGDDDELFISAKAKADLSSHLGKISQQFEIVWLKVKRGDATL 73
           EDWDETMPLPGDVIEGVAEGD+DELF+ AKAKADLSS LG+I+QQFE+VWLKVKRGDATL
Sbjct: 2   EDWDETMPLPGDVIEGVAEGDNDELFVLAKAKADLSSQLGRINQQFEVVWLKVKRGDATL 61

Query: 74  KLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEMSRRISNPDGAEFNR 133
           KLRARIIQEKASIL RKFTIRAATDDRHVA+LGDLTLDQC ELQEMSRRISN +G EFNR
Sbjct: 62  KLRARIIQEKASILQRKFTIRAATDDRHVAVLGDLTLDQCSELQEMSRRISNLNGGEFNR 121

Query: 134 RGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEHSMEATTSRCMAWFCAAVSSGAPLVF 193
           RGVKYEWSKKLD +LPDHRSS+ISSILFMPLKGEHS+EATTSRCMAWFCAAVSSGAPLVF
Sbjct: 122 RGVKYEWSKKLDQNLPDHRSSIISSILFMPLKGEHSLEATTSRCMAWFCAAVSSGAPLVF 181

Query: 194 VNIQSEQIVNVTQEKNRNTGKESWWSKQQTNTSNLQVVHGIRLWFLPGVSEVALEMIPAP 253
           VNIQSEQIVNVTQ+KNRNTGKESWWSKQQ NT NL+VVHGIRLWFLPGVSEV LEMIPAP
Sbjct: 182 VNIQSEQIVNVTQKKNRNTGKESWWSKQQNNTPNLRVVHGIRLWFLPGVSEVGLEMIPAP 241

Query: 254 GEVRFGMDIQRTEEKTCITEEIQICLQEKLRDLMPAGVLMQGFICVSSVTKGSAADRCGL 313
           G+VRFGMDIQRTEE                           GFICVSSVTKGSAADRCGL
Sbjct: 242 GDVRFGMDIQRTEE---------------------------GFICVSSVTKGSAADRCGL 301

Query: 314 GSLLEEAKATNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDTVRLH 373
           GSLLEEAK+TNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMD+VRLH
Sbjct: 302 GSLLEEAKSTNYLLLISRLEGKSVIPSNVSSTGLIHCCDQAEIRSTLVSAMDRMDSVRLH 360

Query: 374 IMALPDSSDAQANETSNNKLQTTRKFLP 402
           IMALPDSSDAQANETS  KLQTTRKF+P
Sbjct: 362 IMALPDSSDAQANETS--KLQTTRKFVP 360

BLAST of Lsi04G013990 vs. TAIR 10
Match: AT4G12070.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-26
Identity = 110/404 (27.23%), Postives = 165/404 (40.84%), Query Frame = 0

Query: 13  AEDWDETMPLPGDVIEGVAEGDD------DELFISAKAKADLSSHLGKISQQFEIVWLKV 72
           +E+W   M   GD++E +  G           F   KA      H    +++  IV ++V
Sbjct: 31  SEEWSGDMLQTGDIVEEIRIGSGPGSAIFKAPFKGGKAWLQKVLHNSFRNKETSIV-VRV 90

Query: 73  KRGDATLKLRARIIQEKASILHRKFTIRAATDDRHVAILGDLTLDQCCELQEM--SRRIS 132
           +RG       +  I    S   R++ +R+  D  +     D T   C  LQE   SR + 
Sbjct: 91  RRGSDDFSDLSACIVPNESAGKRQYMLRSIDDPNYTVGFSDRTESDCLGLQESRGSRMVE 150

Query: 133 NPDGAEFNRRGVKYEWSKKLDVHLPDHRSSVISSILFMPLKGEH--------SMEATTSR 192
               A+     V Y W +++   LP   SS   SILF+P    +         +E T +R
Sbjct: 151 ALVKAKLQDGYVSYPWERRMQEALPISGSSNFLSILFLPKASAYGRTGSRYNDLEDTLAR 210

Query: 193 CMAWFCAAVSSGAPLVFVNIQSEQI------------VNVTQEKN-RNTGKESWWSKQQT 252
             AW   + ++G P+VF+NIQ+E +            VN T   +  N    S +  +  
Sbjct: 211 ANAWLSCSQANGVPIVFMNIQTESLLTKISGETASATVNTTSLSDLSNLANTSLYGFEDY 270

Query: 253 NTSNLQVVHGIRLWFLPGVSEVALEMIPAPGEVRFGMDIQRTEEKTCITEEIQICLQEKL 312
           +  ++ VV  +RLWF P   E  LE+     + + G  I RTEE                
Sbjct: 271 HGVDIGVVRAVRLWFAPLGVEFPLEIKLKDDDTKLGFSISRTEE---------------- 330

Query: 313 RDLMPAGVLMQGFICVSSVT----KGSAADRCGLGSLLEEAKATNYLLLISRLEGKSVIP 372
                      GFI VSSVT    + + A R GL SL  EA   +  L++SR+  + V+P
Sbjct: 331 -----------GFIYVSSVTDHEDESAPAARSGLSSLYREAAKASRRLVVSRVGNQKVLP 390

Query: 373 SNVSSTGLIHCCDQAEIRSTLVSAMDRMDTVRLHIMALPDSSDA 384
             VSSTG I C D   +   L         + LH+     S+ A
Sbjct: 391 WMVSSTGAIRCYDTVSLSQKLSLHRHAKVHIGLHVFLWDSSATA 406

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VBB92.0e-18885.75Plant regulator RWP-RK OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S4DZ941.3e-18485.53uncharacterized protein LOC103493899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DZB92.1e-18285.82uncharacterized protein LOC103493899 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DZA71.8e-18184.77uncharacterized protein LOC103493899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L0T56.9e-18185.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646370 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_038896661.11.8e-19187.75uncharacterized protein LOC120084924 [Benincasa hispida][more]
KAA0064524.14.1e-18885.75Plant regulator RWP-RK [Cucumis melo var. makuwa] >TYK20066.1 Plant regulator RW... [more]
XP_011654193.11.3e-18685.75uncharacterized protein LOC105435315 [Cucumis sativus][more]
XP_016901311.12.8e-18485.53PREDICTED: uncharacterized protein LOC103493899 isoform X1 [Cucumis melo][more]
XP_016901313.14.4e-18285.82PREDICTED: uncharacterized protein LOC103493899 isoform X3 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT4G12070.11.5e-2627.23unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..401
NoneNo IPR availablePANTHERPTHR33984OS02G0717600 PROTEINcoord: 2..388
NoneNo IPR availablePANTHERPTHR33984:SF10PDZ DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 2..388

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G013990.1Lsi04G013990.1mRNA