Lsi04G013670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G013670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box domain-containing protein
Location	chr04: 21455677 .. 21461050 (+)
RNA-Seq Expression	Lsi04G013670
Synteny	Lsi04G013670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTGATGGTGTTCGTGGTGATTGGGGGGTGACTCGGAAGAGGAAGAGAAATGAGGGAGAAAACAACATGTTGAGCAACTTCTCTTTGGATGATCTCAACCAAGACATTCTCGAGAGGGTGCTTTCGAGGCTACCGACCTCGGCATTCTTTCGCCTGTCTTCAGTGTGCAAAAGATGGAAATCGGTTGCAGCTTCTTCAAGCTTCAAGTCTGCGTGCTCGGACATTTCTGCACGCGACCCCTGGTTTTTCATGGTTGATCCACATCTCAACCGCTCGATTGTTTTCGATTCGACTGAGAAAAATTGGAAGAAACTTAACTATCCAAACCTACTTCAGAATCGTCATCTCGACTCGATGCCTGTTGCAGCCACTGGTGGTTTGATCTGTTTTCGCAATTCATCGGGAAACTTTATTGTGTCCAATCCTTTAACAGGCTCCTGTAGCGAGCTTCCTCCTGTGGATCTTGACCAGAAAAATCAATCTCTTCATGCTATTGTGATGAGTGCAGACCCTGACGGTTGTAAGGGCTCTTACAAGCTTGTGTTGGTCTATGGCCAAGTTCCAAAGCTTCGGTTCAAAGTCTACCGTTCGACCACGGGTTGCTGGGATGACGATGTTACCTTGAGTCGAAAAGTTGATGATTCTATCGATTTCAACTTCAATGATGATACTGTTGTGTACTTCCTGAGTCGGACAGGAAATGTAGTGTCCACAAACATGCAGAGAAGCCCATCCAAGCAATACTCATCGGTCATTACAAACAAGAGCGGAGAGGATACCGTTTATTTCATTAGCTCTTCCGGGACTATCATGGCTTGTAATCTGAGCAAGAGATGCTTTGTGGAGTACCCCAGGCTCTTGCCTGTCTTTTCAGAGTATTCTATCGATGTTGTTGAGTGTCGAGGTGAGATGTTAGTTGTTATGTTGTCTGAGTTTCTCGAAACTGCAAGCCTTAGAGTTTGGAGATACAACGAGGAAGCTCGAACTTGGCATCAAATTGCAGCATTGCCTCCTGCAATGTCACACGAGTGGTACGGCAAGAAGGTTGATATTAACTGTGTTGGAGCTGGTGACCAGATACTCATATGCATGAACTCGAATGAACTTTATACGTATCTACTGTGCGATCTCATCGAGAATCAGTGGACTGTATTGCCGAAATGCTATACGAATGGTGAAGCTGTGGAGTTTATGTCTGCCTTTTCATTTGAGCCTAGAATTGAGGCTTCTGTATGACATGAGAAGGAGATAAACATCATCGACTCCAACTGGTTATTAATTATTTTTTCTTTCATATAAACAAATTGTTCTATAGGTGTTTAGTTCTGTAAGCTTTCCTATTTGTTTTTGAATTCTTTGTTTTTCTTAGCTGACTTAGCTAATGAAATTCAAGAAGTTGAGAATAGAAGAGGAGGGAGAGATGTAGATTCTTTCTTAATAACCTGCTGGTTTATATCCTAATAGTAATAGTACGCCAATTTTACTGTTCAGTCTGTAACTTTCTTTTGATTTTCAGTAGATAAAGGCTGTTTTTTCTTACAGAGAAGGTAAATGCTTTACTTTTATTGTAAAAAATCTACTGTTCAGTTGAAAAATTACCTCAACTCAGCTCTGCATCTGCTTTTGAGTTCCTCAGTTGTGAAACTTTGTTCCAATTGGATGAATTGCAGCATAAGGTTGTACCTTTACTCTGAAAAGGCTGCAATATGAATAGGCAAATCTCTGTAATGTTGTCCTGTCAACAAACCATTCTTTCACAATAAGTTTAGTTCATCCCATTCAACAATGAAATGATATAAACTTAAATTAATATTAATGTTTGACAGGTCAATAAGGGCTTTGTAAATATGAATAATGAAGAACTTAAACGAGAATTAAGTTCAAATTTTGGTAGTGTGAGAATAGTTAATACACATAAACTAGCCTAAATTCTTGTGATATAAAAAGTAACTTTATTCCATTAAAAAAAGAGAAAAGAGAAGATTATATTTTACTTAAAAAAAGAGAAGATTATATTACAAGCTTAGTATTTCAACTTTTAGATTCATGTCAACTAGGTAAGTATTTGAATTTTTATTTGAATTTTTAATTTTGTGTGTCTAATTGATTGTTGATTTTTTTAAAGGCTTACAAATTAATAGGTTGAGACCGTAATAAGTCCTTGAACTTAAAATTGTCTAACAATCTTTTACTGTTTAAACAAATCATAGTTGGGCATTTTGATTGAAAGTACTGAAAAAATATAGAAAAGGTAAAACTTGTTTACATTGTTTGGGTTTGTTTTATTTATTTATTTTTTTACAAGAGCTCATATAGTGGGATAGGAAAACGGAATATGTTCTTTATTCGGAATTTTTTTTTTGGGTACAAATGACCTTAGTTCACAGTAATAATGTTGTATTTTCCAAATGTTTGAAATAATGAAGTATGATCATCTGCTGTTGCCAGACCACATTAAAATCGTGTTACACGGAAAAAGAAATGTATTTTTTTGGGTTTTGTTTATAATAAGCATGACCTTAGTTTCACAATATTAATGTCGTTTTCCTCGAATTTTGAAAATGATGAAGTATGATCATTTGTCACTGCCATATCGTATTAAGATCGTGTTAAAGTTATTCGTACAATAATGTCATTTCCCTCATGCTCTACCTCCTTGCTTTGCTCTCACACGCTAGGGCTCTTCTTCCTTCATTTCCTCGTGCGCACGCTCTTCCTTGCTCTCTTACTCACATTCGTCATTTCGAACCCTCGTTAATAGTATGTGAGATGCAAAATTTATAATTAATATGCTCCGGCAATGAGAGGAGATCATAATTCATTATTGTCAATGGACAAAAGCCATTACAAATCCAAAATTTGGTCATGGTACAAAATCTTTTAACTATTTTAACCCTAAATGTCATTTAAAAAAAGAGAGTAAAGATTATTGAAAATCTTCGTCGCTACGGCTACATCCACGCGCGGGGGCTGGCGGTCGCGTATCGTCAACAGCGTAGCGTCGGCCGGGTCGGATTCGTCATTGTGATTACCCCTTCCTCAAGAAATTCTCAGATTCATTGAGTTTCGAGTTATAAATTCGTAAAGAGGACAAAATTTTATATCAGTCGAGGAATTAGAAATGGAATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGACTTGGGGAAGAAACAGAGATTCGAGGAAGCAATTTCCACCATTATTTCTCTGCTTCGAAATCGATATCCTACTGCTTCTCCTTCACTACGCAAATCGGTCTTTCATCCTCCTCCTCTTTTTGTTCAATTTTGTTGTCTCTTAATACTTCTCGATCTTTATTTCATTCCATTGTTCCATTTTGTGTGAATTTGTTCCGTTATGTCTTTTTTTCCTGAGAGAAATTCGTAATATGCGTGAAATCTTGGAGGTTTCTACTAGTATGGTGATATATTCTTTCGTTTGAATCTGATTTTTTCTCTGCGGAGTTGAATTGTTGAATATTCATTATTTGATGGCAGTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTCAAGCTTTTTCAGTTTTCTTTAACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCGTAGCTCAGGCCAAGGAAATTCTGCACCAAATCGACAATCCATCTCCGGCTTCACAAAGTAATTCATCAAATGGAGGTACTAGTTAAGATGCATTTCTTTCCATACAAAAACACTTTTTAGTTTTTCATTAAATTAGTTGGCTATTTGTTGAAATGTTCTTATCTTGATTCAGGATATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAATGGCTGGTGCAGTCAAATCTCTTGACAGCCGCCGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAAGTCTGGCTGAGAACAGCAACACTTCTGAGAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAATTCTATAGATGGGGTAATGTTTGTTTCCTATCTCTCAGAGTACTTCTTCATGTTTGTTTGAGAATTACTTGTTTAGAATATATATACAGATATTGCGCGGTTCGAGTGGTCCGACGTCTTCTTTTATTTAAGACTGATCTTCCTACTAATGGTGGTGATTTTACATGGTTAAATATATATGTTTCTAGTATGAAATATTGACTGTAAACTCCAACAATGTCTTTTCTTCCCCAATTGATAGGAATAACTTGGGTGTTGGATTTCATATATCAAATTATTATCCAAATTCACATGTTTGCTTAAACTTTTGGATTGATGGGTGATTTTAACACTACTTTCTTCATAGTTCATATCATACTCGGAGCAAATTTGTTATTTTTGTAATGGAGAGAAAATGAAGGATGTGCTTGTATCAGTCTCATGGTTCAAATTTGTATGAGTTGATTGTTGTTACCATTTCTATCAGATGTAGCACTTTGTGCAGATCCATGTAGATCAATAGTCCATATCCATATAGATCAATAGTTCCAATTTGTGGGATTCTGACATTGTTTTTCAAATGGTTAAATCATTTGAGTAGCTGTAGTATAACATATTTCTTTTCTGTCTAATTAGTTCCTGGATTTGGACACGGCTAGTGGACCACCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTACCATAACAGATGAAGTTCTTGCGAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTAGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGTAATATGCTAACTTGATTGGTGTCTGTTAATGCTAAAAACTCAACTCTTATTTAGTTTAAACGCGTCCTATGCTTAAGCTCGGAATTTGTTGTAGGATGAGCATAACTCTTGCCCGATCTGTCGACATGAATTGCCCACCGATGACCACGCATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCTGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGAATGGTATTGCAATGCCTTGTATCAGGGAGTCAATTTCCAAGTGATGTATGATAAAGGTATTTTATTATGATTTTTCTGGACTTGATGTTGAAGCTTCGTTTTTTAGTCATTATTTTATAGCAGAAACTATGGAGCACAGTTTTCATCTATGCTTCTTTGTCATTAAATTGCCACAATATTTTTTGTTCTATTGATTGGTTGATACGGATCTGTTTAGTTTTGGCAAATGCAAAAGGTAAATTCATATATAGAATCCATTAAATCT

mRNA sequence

ATGGAGCTTGATGGTGTTCGTGGTGATTGGGGGGTGACTCGGAAGAGGAAGAGAAATGAGGGAGAAAACAACATGTTGAGCAACTTCTCTTTGGATGATCTCAACCAAGACATTCTCGAGAGGGTGCTTTCGAGGCTACCGACCTCGGCATTCTTTCGCCTGTCTTCAGTGTGCAAAAGATGGAAATCGGTTGCAGCTTCTTCAAGCTTCAAGTCTGCGTGCTCGGACATTTCTGCACGCGACCCCTGGTTTTTCATGGTTGATCCACATCTCAACCGCTCGATTGTTTTCGATTCGACTGAGAAAAATTGGAAGAAACTTAACTATCCAAACCTACTTCAGAATCGTCATCTCGACTCGATGCCTGTTGCAGCCACTGGTGGTTTGATCTGTTTTCGCAATTCATCGGGAAACTTTATTGTGTCCAATCCTTTAACAGGCTCCTGTAGCGAGCTTCCTCCTGTGGATCTTGACCAGAAAAATCAATCTCTTCATGCTATTGTGATGAGTGCAGACCCTGACGGTTGTAAGGGCTCTTACAAGCTTGTGTTGGTCTATGGCCAAGTTCCAAAGCTTCGGTTCAAAGTCTACCGTTCGACCACGGGTTGCTGGGATGACGATGTTACCTTGAGTCGAAAAGTTGATGATTCTATCGATTTCAACTTCAATGATGATACTGTTGTGTACTTCCTGAGTCGGACAGGAAATGTAGTGTCCACAAACATGCAGAGAAGCCCATCCAAGCAATACTCATCGGTCATTACAAACAAGAGCGGAGAGGATACCGTTTATTTCATTAGCTCTTCCGGGACTATCATGGCTTGTAATCTGAGCAAGAGATGCTTTGTGGAGTACCCCAGGCTCTTGCCTGTCTTTTCAGAGTATTCTATCGATGTTGTTGAGTGTCGAGGTGAGATGTTAGTTGTTATGTTGTCTGAGTTTCTCGAAACTGCAAGCCTTAGAGTTTGGAGATACAACGAGGAAGCTCGAACTTGGCATCAAATTGCAGCATTGCCTCCTGCAATGTCACACGAGTGGTACGGCAAGAAGGTTGATATTAACTGTGTTGGAGCTGGTGACCAGATACTCATATGCATGAACTCGAATGAACTTTATACGTATCTACTGTGCGATCTCATCGAGAATCAGTGGACTGTATTGCCGAAATGCTATACGAATGGTGAAGCTGTGGAGTTTATGTCTGCCTTTTCATTTGAGCCTAGAATTGAGGCTTCTTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTCAAGCTTTTTCAGTTTTCTTTAACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCGTAGCTCAGGCCAAGGAAATTCTGCACCAAATCGACAATCCATCTCCGGCTTCACAAAGTAATTCATCAAATGGAGGATATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAATGGCTGGTGCAGTCAAATCTCTTGACAGCCGCCGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAAGTCTGGCTGAGAACAGCAACACTTCTGAGAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAATTCTATAGATGGGTTCCTGGATTTGGACACGGCTAGTGGACCACCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTACCATAACAGATGAAGTTCTTGCGAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTAGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGATGAGCATAACTCTTGCCCGATCTGTCGACATGAATTGCCCACCGATGACCACGCATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCTGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGAATGGTATTGCAATGCCTTGTATCAGGGAGTCAATTTCCAAGTGATGTATGATAAAGGTATTTTATTATGATTTTTCTGGACTTGATGTTGAAGCTTCGTTTTTTAGTCATTATTTTATAGCAGAAACTATGGAGCACAGTTTTCATCTATGCTTCTTTGTCATTAAATTGCCACAATATTTTTTGTTCTATTGATTGGTTGATACGGATCTGTTTAGTTTTGGCAAATGCAAAAGGTAAATTCATATATAGAATCCATTAAATCT

Coding sequence (CDS)

ATGGAGCTTGATGGTGTTCGTGGTGATTGGGGGGTGACTCGGAAGAGGAAGAGAAATGAGGGAGAAAACAACATGTTGAGCAACTTCTCTTTGGATGATCTCAACCAAGACATTCTCGAGAGGGTGCTTTCGAGGCTACCGACCTCGGCATTCTTTCGCCTGTCTTCAGTGTGCAAAAGATGGAAATCGGTTGCAGCTTCTTCAAGCTTCAAGTCTGCGTGCTCGGACATTTCTGCACGCGACCCCTGGTTTTTCATGGTTGATCCACATCTCAACCGCTCGATTGTTTTCGATTCGACTGAGAAAAATTGGAAGAAACTTAACTATCCAAACCTACTTCAGAATCGTCATCTCGACTCGATGCCTGTTGCAGCCACTGGTGGTTTGATCTGTTTTCGCAATTCATCGGGAAACTTTATTGTGTCCAATCCTTTAACAGGCTCCTGTAGCGAGCTTCCTCCTGTGGATCTTGACCAGAAAAATCAATCTCTTCATGCTATTGTGATGAGTGCAGACCCTGACGGTTGTAAGGGCTCTTACAAGCTTGTGTTGGTCTATGGCCAAGTTCCAAAGCTTCGGTTCAAAGTCTACCGTTCGACCACGGGTTGCTGGGATGACGATGTTACCTTGAGTCGAAAAGTTGATGATTCTATCGATTTCAACTTCAATGATGATACTGTTGTGTACTTCCTGAGTCGGACAGGAAATGTAGTGTCCACAAACATGCAGAGAAGCCCATCCAAGCAATACTCATCGGTCATTACAAACAAGAGCGGAGAGGATACCGTTTATTTCATTAGCTCTTCCGGGACTATCATGGCTTGTAATCTGAGCAAGAGATGCTTTGTGGAGTACCCCAGGCTCTTGCCTGTCTTTTCAGAGTATTCTATCGATGTTGTTGAGTGTCGAGGTGAGATGTTAGTTGTTATGTTGTCTGAGTTTCTCGAAACTGCAAGCCTTAGAGTTTGGAGATACAACGAGGAAGCTCGAACTTGGCATCAAATTGCAGCATTGCCTCCTGCAATGTCACACGAGTGGTACGGCAAGAAGGTTGATATTAACTGTGTTGGAGCTGGTGACCAGATACTCATATGCATGAACTCGAATGAACTTTATACGTATCTACTGTGCGATCTCATCGAGAATCAGTGGACTGTATTGCCGAAATGCTATACGAATGGTGAAGCTGTGGAGTTTATGTCTGCCTTTTCATTTGAGCCTAGAATTGAGGCTTCTTTCTATTCCGTAATTTGCCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTCAAGCTTTTTCAGTTTTCTTTAACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCGTAGCTCAGGCCAAGGAAATTCTGCACCAAATCGACAATCCATCTCCGGCTTCACAAAGTAATTCATCAAATGGAGGATATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAATGGCTGGTGCAGTCAAATCTCTTGACAGCCGCCGCAGCTGCGCTATCTAATGCTGAATCTTCTCAAAGTCTGGCTGAGAACAGCAACACTTCTGAGAATGCTACTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAATTCTATAGATGGGTTCCTGGATTTGGACACGGCTAGTGGACCACCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTCGCAAAACTTCCTGTAATTACCATAACAGATGAAGTTCTTGCGAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTAGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGATGAGCATAACTCTTGCCCGATCTGTCGACATGAATTGCCCACCGATGACCACGCATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCTGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGGTGGTGAATATATGTATATTTGA

Protein sequence

MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDSMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSYKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVSTNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVVECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGDQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEASFYSVICRVATVLKTRFTAPGFWLSGLKLFQFSLTLLSDHSERQHLEACVAQAKEILHQIDNPSPASQSNSSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAESSQSLAENSNTSENATNILQALIENLDNSIDGFLDLDTASGPPRVPPASKEVVAKLPVITITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHAYESWKEREKEAEEERKGAANAVRGGEYMYI

Homology

[Close]

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot
Match: Q9SMZ3 (F-box only protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBX13 PE=2 SV=2)

HSP 1 Score: 414.1 bits (1063), Expect = 3.1e-114
Identity = 222/415 (53.49%), Postives = 287/415 (69.16%), Query Frame = 0


Query: 13  TRKRKRNEGENNML----SNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKRWKSVAASS 72
           T KRK  + E + +    S F +DDLN D+LERVLS LPTS FFR+SSVCKRWKS   S 
Sbjct: 45  TGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSK 104

Query: 73  SFKSACSDISARDPWFFMVDPHLN-RSIVFDSTEKNWKKLNYPNLLQNRHLDSMPVAATG 132
           SFK ACS I  RDPWFFM+D   N  S VFDSTE +WK LN  + L +   D +PVA++G
Sbjct: 105 SFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSG 164

Query: 133 GLICFRNS-SGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSYKLVLVY 192
           GL+C+R S SG+F++ NPLTGS  ++P  D +  N+ L A+ M+        SY LV + 
Sbjct: 165 GLLCYRCSISGDFLLRNPLTGSSRDIPSQD-NNNNKPLQAVAMTT-TTVTPSSYTLVTIS 224

Query: 193 GQVPKLRFKVYRSTTGCWDDDVTLS--RKVDDSIDFNFNDDT-VVYFLSRTGNVV--STN 252
           G++P L FK+Y S    W  D  L   +  D S+  +++ D+  VYFLS+ GNVV  S N
Sbjct: 225 GEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNN 284

Query: 253 MQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVVE 312
           +QRSPSKQYSSVIT     + VYF+SS GTI+AC+L+KRCF E P+LLP F EYSID+VE
Sbjct: 285 LQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVE 344

Query: 313 CRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCV-GAGD 372
           C G M V++LSEF E+ASLR+WR +   R W Q+  LPPA+SHE YGKK DINCV GAG+
Sbjct: 345 CEGTMYVILLSEFFESASLRIWRLDNN-REWVQVGMLPPALSHELYGKKGDINCVGGAGN 404

Query: 373 QILICMNSN--ELY-TYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           +IL+C N++  E+Y  Y + DL+  +W  LPKC+ +GEAV+F+SA SF+PRIEA+
Sbjct: 405 KILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEAT 456

[Close]

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot
Match: Q8RXD3 (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-93
Identity = 175/274 (63.87%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 404 SFEPRIEASFYSVICRVATVLKTRFTAPGFWLSGLKLFQFSLTLLSDHSERQHLEACVAQ 463
           S  P +   FY V+ RVATVLKTR+TA GFW++GL LF+ +  L+SD SE++HL++CVAQ
Sbjct: 48  SSSPSLRKQFYIVVSRVATVLKTRYTATGFWVAGLSLFEEAERLVSDASEKKHLKSCVAQ 107

Query: 464 AKEILHQIDNPSPASQSNSSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAES 523
           AKE L ++DN     Q   S+ GYLFEGHLTVD EPPQPQWLVQ NL+ +A A++   ES
Sbjct: 108 AKEQLSEVDN-----QPTESSQGYLFEGHLTVDREPPQPQWLVQQNLM-SAFASIVGGES 167

Query: 524 SQSLAENSNTSENATNILQALIENLDNSIDGFLDLDTASGPPRVPPASKEVVAKLPVITI 583
           S    E  NT     N++Q LI  LD  I   LD     GPPR PPASKEVV KLPVI  
Sbjct: 168 SNGPTE--NTIGETANLMQELINGLDMIIPDILD---DGGPPRAPPASKEVVEKLPVIIF 227

Query: 584 TDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT 643
           T+E+L K G + +C IC+ENL + DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT
Sbjct: 228 TEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT 287

Query: 644 DDHAYESWKEREKEAEEERKGAANAVRGGEYMYI 678
           DD  YE+WKEREKEAEEERKGA NAVRGGEYMY+
Sbjct: 288 DDQKYENWKEREKEAEEERKGAENAVRGGEYMYV 310

[Close]

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot
Match: Q9FZK1 (F-box only protein 6 OS=Arabidopsis thaliana OX=3702 GN=FBX6 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-25
Identity = 92/366 (25.14%), Postives = 163/366 (44.54%), Query Frame = 0


Query: 36  QDILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFKSACSDISARDPWFFMV-DPHLNRS 95
           QD+ E V+SRLP + FF+  +VC++W ++  S SF    +++    PWF+ +   ++N  
Sbjct: 122 QDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSG 181

Query: 96  IVFDSTEKNWKKLNYPNLLQNRHLDSMPVAATGGLICFRN-SSGNFIVSNPLTGSCSELP 155
            V+D + K W     P L +   +  +P+A+ GGL+CF +    NF VSNPLT S  ELP
Sbjct: 182 QVYDPSLKKWHHPIIPALPKKSIV--LPMASAGGLVCFLDIGHRNFYVSNPLTKSFRELP 241

Query: 156 PVDLDQKNQSLHAIVMSADPDGCKGSYKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRK 215
                 K  S  A+ M+ + +     YK++ V  +     ++VY S +  W    T+   
Sbjct: 242 ARSF--KVWSRVAVGMTLNGNSTSHGYKVLWVGCEG---EYEVYDSLSNVWTKRGTIPSN 301

Query: 216 VDDSIDFNFND------DTVVYFLSRTGNVVSTNMQRSPSKQYSSVITNKSGEDTVYFIS 275
           +   +  NF         T+ + L+    ++S +M     KQ+                 
Sbjct: 302 IKLPVLLNFKSQPVAIHSTLYFMLTDPEGILSYDMVSGKWKQF----------------- 361

Query: 276 SSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVVECRGE--MLVVMLSEFLETASLRVWRY 335
                               ++P   + S   +   GE  MLV +L++   T  + +W  
Sbjct: 362 --------------------IIPGPPDLSDHTLAACGERLMLVGLLTKNAATC-VCIWEL 421

Query: 336 NEEARTWHQIAALPPAMSHEWYGKKVDINCVG-AGDQILICMNSNELYTYLLCDLIENQW 391
            +    W ++  +P     E+YGK + +NC+G  G  IL+ + S ++   +  + +  +W
Sbjct: 422 QKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLSLRSRQMNRLITYNAVTREW 442

[Close]

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot
Match: Q6GPV5 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-17
Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 568 PPASKEVVAKLPVITITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 627
           PPASK+VV  LP +T+T E   +    ++C +C       + +++LPC+H FH  C+ PW
Sbjct: 53  PPASKKVVESLPKVTVTPE---QADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPW 112

Query: 628 LDEHNSCPICRHELPTDDHAYESWKEREKEAEEERKGAANAVRGGEY 675
           L + NSCP+CRHELPTD   YE +K+ EK   ++++     + G  Y
Sbjct: 113 LGKTNSCPLCRHELPTDSPDYEEFKQ-EKARRQQKEHRLECLHGAMY 155

[Close]

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-17
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 568 PPASKEVVAKLPVITITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPW 627
           PPASK  +  LP + +T ++L       QCA+C +       ++++PCKH FH  CL PW
Sbjct: 189 PPASKSAIDALPTVKVTKDMLK--SEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPW 248

Query: 628 LDEHNSCPICRHELPTDDHAYES 651
           L+ HNSCP+CR ELPTDD  YE+
Sbjct: 249 LELHNSCPVCRFELPTDDPDYEN 269

[Close]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL
Match: A0A5A7VE16 (F-box only protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001540 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 9.7e-228
Identity = 390/413 (94.43%), Postives = 401/413 (97.09%), Query Frame = 0


Query: 1   MEL-DGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60
           MEL D   GD GVTRKRKR +GENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK
Sbjct: 1   MELVDARGGDLGVTRKRKRYDGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60

Query: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLD 120
           RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQN HLD
Sbjct: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNHHLD 120

Query: 121 SMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGS 180
           SMPVAA+GGLICFRNS GNF+VSNPLTGSCSELPPVDLDQK+QSLHAIVMSADPDGCKGS
Sbjct: 121 SMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSADPDGCKGS 180

Query: 181 YKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240
           YKLVLVYGQVPKLRFKVY STTGCWD+DV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVS
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 241 TNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300
           TNMQRSPSKQYSSV+TNK+GEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNKNGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300

Query: 301 VECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360
           VECRGEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAG
Sbjct: 301 VECRGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 361 DQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           DQILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEA+
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAT 413

[Close]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL
Match: A0A1S3BVJ2 (F-box only protein 13 OS=Cucumis melo OX=3656 GN=LOC103493720 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 9.7e-228
Identity = 390/413 (94.43%), Postives = 401/413 (97.09%), Query Frame = 0


Query: 1   MEL-DGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60
           MEL D   GD GVTRKRKR +GENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK
Sbjct: 1   MELVDARGGDLGVTRKRKRYDGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60

Query: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLD 120
           RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQN HLD
Sbjct: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNHHLD 120

Query: 121 SMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGS 180
           SMPVAA+GGLICFRNS GNF+VSNPLTGSCSELPPVDLDQK+QSLHAIVMSADPDGCKGS
Sbjct: 121 SMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSADPDGCKGS 180

Query: 181 YKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240
           YKLVLVYGQVPKLRFKVY STTGCWD+DV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVS
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 241 TNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300
           TNMQRSPSKQYSSV+TNK+GEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNKNGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300

Query: 301 VECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360
           VECRGEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAG
Sbjct: 301 VECRGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 361 DQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           DQILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEA+
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAT 413

[Close]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL
Match: A0A0A0L096 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G650190 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 6.9e-226
Identity = 385/413 (93.22%), Postives = 400/413 (96.85%), Query Frame = 0


Query: 1   MEL-DGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60
           MEL D   GD GVTRKRKRN+GENN LSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK
Sbjct: 1   MELVDARGGDLGVTRKRKRNDGENNTLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60

Query: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLD 120
           RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQN HLD
Sbjct: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNHHLD 120

Query: 121 SMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGS 180
           SMPVAA+GGLICFRNS GNF+VSNPLTGSCSELPPVDLDQK+QSLHAIVMS DPDGCKGS
Sbjct: 121 SMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSEDPDGCKGS 180

Query: 181 YKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240
           YKLVLVYGQVPKLRFKVY STTGCWD+DV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVS
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 241 TNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300
           TNMQRSPSKQYSSV+TN++GEDTVYFISSSGTIMACNL+K+CFVEYPRLLPVFSEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNRNGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDV 300

Query: 301 VECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360
           VEC+GEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAG
Sbjct: 301 VECQGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 361 DQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           DQILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEA+
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAT 413

[Close]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL
Match: A0A6J1F7Z8 (F-box only protein 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442977 PE=4 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 2.1e-222
Identity = 377/411 (91.73%), Postives = 396/411 (96.35%), Query Frame = 0


Query: 1   MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60
           MEL  V GD GVTRKRKRN+GENNMLSNFSLD+LNQDILERVLSRLPTSAFFRLSSVCKR
Sbjct: 1   MELGDVHGDLGVTRKRKRNDGENNMLSNFSLDNLNQDILERVLSRLPTSAFFRLSSVCKR 60

Query: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDS 120
           WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYP+LLQN HLDS
Sbjct: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPHLLQNHHLDS 120

Query: 121 MPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180
           +PVAA+GGLICFRNS+GNFIV+NPLTGSCSELPPVDLDQK QSLHAIVM+ADP GCKGSY
Sbjct: 121 IPVAASGGLICFRNSAGNFIVTNPLTGSCSELPPVDLDQKKQSLHAIVMNADPGGCKGSY 180

Query: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240
           K+VLVYGQ+PKLRFKVY STTGCWDDDVTLSRKVDDSIDFNFNDDT VYFLSRTGNVVST
Sbjct: 181 KIVLVYGQLPKLRFKVYHSTTGCWDDDVTLSRKVDDSIDFNFNDDTGVYFLSRTGNVVST 240

Query: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVV 300
           NMQRSPSKQYSSV+TNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRL+PVFSEYSIDVV
Sbjct: 241 NMQRSPSKQYSSVVTNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLMPVFSEYSIDVV 300

Query: 301 ECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360
            C+GEMLVVMLSEFLETASLRVWRY+EE+RTWHQIAALPPAMSHEWYGKK+DINCVGAGD
Sbjct: 301 ACQGEMLVVMLSEFLETASLRVWRYDEESRTWHQIAALPPAMSHEWYGKKIDINCVGAGD 360

Query: 361 QILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEA 412
           QIL+CMNSNE  TYLLC+L+ENQWT L KCY NGEAVEFMSAFSFEPRIEA
Sbjct: 361 QILVCMNSNEHCTYLLCNLVENQWTELQKCYMNGEAVEFMSAFSFEPRIEA 411

[Close]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL
Match: A0A6J1INV1 (F-box only protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111477227 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 4.8e-219
Identity = 371/411 (90.27%), Postives = 393/411 (95.62%), Query Frame = 0


Query: 1   MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60
           MEL  V G  GVTRKRKRN+GENNMLSNFSLD+LNQDILERVLSRLPTSAFFRLSSVCKR
Sbjct: 1   MELGDVHGGLGVTRKRKRNDGENNMLSNFSLDNLNQDILERVLSRLPTSAFFRLSSVCKR 60

Query: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDS 120
           WKSVAASSSFKSACSDISAR+PWFFMVDPHLNRSIVFDSTEKNWKKLNYP+LLQN HLDS
Sbjct: 61  WKSVAASSSFKSACSDISARNPWFFMVDPHLNRSIVFDSTEKNWKKLNYPHLLQNHHLDS 120

Query: 121 MPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180
           +PVAA+GGLICFRNS+GNFIV+NPLTGSCSELPPVDLDQK QSLHAIVM+ADP GCKGSY
Sbjct: 121 IPVAASGGLICFRNSAGNFIVTNPLTGSCSELPPVDLDQKKQSLHAIVMNADPGGCKGSY 180

Query: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240
           K+VLVYGQ+PKLRFKVY STTGCWDDDVTLSRKVDDSIDFNFNDDT VYFLSRTGNVVST
Sbjct: 181 KIVLVYGQLPKLRFKVYHSTTGCWDDDVTLSRKVDDSIDFNFNDDTGVYFLSRTGNVVST 240

Query: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVV 300
           NMQRSPSKQYSSV+TNK GEDTVYFISSSGTIMACNLSKRCF+EYPRL+PVFSEYSIDVV
Sbjct: 241 NMQRSPSKQYSSVVTNKRGEDTVYFISSSGTIMACNLSKRCFIEYPRLMPVFSEYSIDVV 300

Query: 301 ECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360
            C+GEMLVVMLSEFLETASLRVWR++EE+RTWHQIAALPPAMSHEWYGKK+DINCVGAGD
Sbjct: 301 ACQGEMLVVMLSEFLETASLRVWRHDEESRTWHQIAALPPAMSHEWYGKKIDINCVGAGD 360

Query: 361 QILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEA 412
           QIL+CMNSNE  TYLLC+L+ENQWT L KCY NGEAVEFMSA SFEPRIEA
Sbjct: 361 QILVCMNSNEHCTYLLCNLVENQWTELQKCYMNGEAVEFMSALSFEPRIEA 411

[Close]

BLAST of Lsi04G013670 vs. NCBI nr
Match: XP_038900148.1 (F-box only protein 13 [Benincasa hispida] >XP_038900150.1 F-box only protein 13 [Benincasa hispida])

HSP 1 Score: 802.0 bits (2070), Expect = 4.0e-228
Identity = 391/412 (94.90%), Postives = 399/412 (96.84%), Query Frame = 0


Query: 1   MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60
           MEL   RGD GVTRKRKRN+GEN M SNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR
Sbjct: 1   MELGDARGDLGVTRKRKRNDGENTMFSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60

Query: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDS 120
           WKSVAASSSFKSACSDISARDPWFFMVDPHLN+SIVFDSTE NWKKLNYPNLLQNRH  S
Sbjct: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNQSIVFDSTENNWKKLNYPNLLQNRHHYS 120

Query: 121 MPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180
           MPVAA+GGLICFRNSS NFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY
Sbjct: 121 MPVAASGGLICFRNSSRNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180

Query: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240
           KLVLVYGQVPKLRFKVYRSTTGCWDDDV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVST
Sbjct: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240

Query: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVV 300
           NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSID+V
Sbjct: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDLV 300

Query: 301 ECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360
           EC+GEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD
Sbjct: 301 ECQGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360

Query: 361 QILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           QILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEAS
Sbjct: 361 QILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAS 412

[Close]

BLAST of Lsi04G013670 vs. NCBI nr
Match: XP_008452809.1 (PREDICTED: F-box only protein 13 [Cucumis melo] >KAA0064556.1 F-box only protein 13 [Cucumis melo var. makuwa] >TYK20034.1 F-box only protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 799.7 bits (2064), Expect = 2.0e-227
Identity = 390/413 (94.43%), Postives = 401/413 (97.09%), Query Frame = 0


Query: 1   MEL-DGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60
           MEL D   GD GVTRKRKR +GENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK
Sbjct: 1   MELVDARGGDLGVTRKRKRYDGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60

Query: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLD 120
           RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQN HLD
Sbjct: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNHHLD 120

Query: 121 SMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGS 180
           SMPVAA+GGLICFRNS GNF+VSNPLTGSCSELPPVDLDQK+QSLHAIVMSADPDGCKGS
Sbjct: 121 SMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSADPDGCKGS 180

Query: 181 YKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240
           YKLVLVYGQVPKLRFKVY STTGCWD+DV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVS
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 241 TNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300
           TNMQRSPSKQYSSV+TNK+GEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNKNGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300

Query: 301 VECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360
           VECRGEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAG
Sbjct: 301 VECRGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 361 DQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           DQILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEA+
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAT 413

[Close]

BLAST of Lsi04G013670 vs. NCBI nr
Match: XP_004141357.1 (F-box only protein 13 [Cucumis sativus] >KGN55400.1 hypothetical protein Csa_012566 [Cucumis sativus])

HSP 1 Score: 793.5 bits (2048), Expect = 1.4e-225
Identity = 385/413 (93.22%), Postives = 400/413 (96.85%), Query Frame = 0


Query: 1   MEL-DGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60
           MEL D   GD GVTRKRKRN+GENN LSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK
Sbjct: 1   MELVDARGGDLGVTRKRKRNDGENNTLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCK 60

Query: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLD 120
           RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQN HLD
Sbjct: 61  RWKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNHHLD 120

Query: 121 SMPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGS 180
           SMPVAA+GGLICFRNS GNF+VSNPLTGSCSELPPVDLDQK+QSLHAIVMS DPDGCKGS
Sbjct: 121 SMPVAASGGLICFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSEDPDGCKGS 180

Query: 181 YKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240
           YKLVLVYGQVPKLRFKVY STTGCWD+DV LSRKVDDSIDFNFNDDTVVYFLSRTGNVVS
Sbjct: 181 YKLVLVYGQVPKLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVS 240

Query: 241 TNMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDV 300
           TNMQRSPSKQYSSV+TN++GEDTVYFISSSGTIMACNL+K+CFVEYPRLLPVFSEYSIDV
Sbjct: 241 TNMQRSPSKQYSSVVTNRNGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDV 300

Query: 301 VECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360
           VEC+GEMLVVMLSEFLETASLRVWRY+EEARTWHQIAALPPAMSHEWYGKKVDINCVGAG
Sbjct: 301 VECQGEMLVVMLSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAG 360

Query: 361 DQILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           DQILICMNSN+LYTYLLCDL+ENQWT LPKCY NGEAVEFMSAFSFEPRIEA+
Sbjct: 361 DQILICMNSNDLYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEAT 413

[Close]

BLAST of Lsi04G013670 vs. NCBI nr
Match: XP_022936324.1 (F-box only protein 13-like [Cucurbita moschata])

HSP 1 Score: 781.9 bits (2018), Expect = 4.3e-222
Identity = 377/411 (91.73%), Postives = 396/411 (96.35%), Query Frame = 0


Query: 1   MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60
           MEL  V GD GVTRKRKRN+GENNMLSNFSLD+LNQDILERVLSRLPTSAFFRLSSVCKR
Sbjct: 1   MELGDVHGDLGVTRKRKRNDGENNMLSNFSLDNLNQDILERVLSRLPTSAFFRLSSVCKR 60

Query: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDS 120
           WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYP+LLQN HLDS
Sbjct: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPHLLQNHHLDS 120

Query: 121 MPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180
           +PVAA+GGLICFRNS+GNFIV+NPLTGSCSELPPVDLDQK QSLHAIVM+ADP GCKGSY
Sbjct: 121 IPVAASGGLICFRNSAGNFIVTNPLTGSCSELPPVDLDQKKQSLHAIVMNADPGGCKGSY 180

Query: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240
           K+VLVYGQ+PKLRFKVY STTGCWDDDVTLSRKVDDSIDFNFNDDT VYFLSRTGNVVST
Sbjct: 181 KIVLVYGQLPKLRFKVYHSTTGCWDDDVTLSRKVDDSIDFNFNDDTGVYFLSRTGNVVST 240

Query: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVV 300
           NMQRSPSKQYSSV+TNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRL+PVFSEYSIDVV
Sbjct: 241 NMQRSPSKQYSSVVTNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLMPVFSEYSIDVV 300

Query: 301 ECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360
            C+GEMLVVMLSEFLETASLRVWRY+EE+RTWHQIAALPPAMSHEWYGKK+DINCVGAGD
Sbjct: 301 ACQGEMLVVMLSEFLETASLRVWRYDEESRTWHQIAALPPAMSHEWYGKKIDINCVGAGD 360

Query: 361 QILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEA 412
           QIL+CMNSNE  TYLLC+L+ENQWT L KCY NGEAVEFMSAFSFEPRIEA
Sbjct: 361 QILVCMNSNEHCTYLLCNLVENQWTELQKCYMNGEAVEFMSAFSFEPRIEA 411

[Close]

BLAST of Lsi04G013670 vs. NCBI nr
Match: KAG6591505.1 (F-box only protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 776.9 bits (2005), Expect = 1.4e-220
Identity = 375/411 (91.24%), Postives = 394/411 (95.86%), Query Frame = 0


Query: 1   MELDGVRGDWGVTRKRKRNEGENNMLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKR 60
           MEL  V G  GVTRKRKRN+GENNMLS FSLD+LNQDILERVLSRLPTSAFFRLSSVCKR
Sbjct: 1   MELGDVHGGLGVTRKRKRNDGENNMLSTFSLDNLNQDILERVLSRLPTSAFFRLSSVCKR 60

Query: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQNRHLDS 120
           WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYP+LLQN HLDS
Sbjct: 61  WKSVAASSSFKSACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPHLLQNHHLDS 120

Query: 121 MPVAATGGLICFRNSSGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSY 180
           +PVAA+GGLICFRNS+GNFIV+NPLTGSCSELPPVDLDQK QSLHAIVM+ADP GCKGSY
Sbjct: 121 IPVAASGGLICFRNSAGNFIVTNPLTGSCSELPPVDLDQKKQSLHAIVMNADPGGCKGSY 180

Query: 181 KLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRKVDDSIDFNFNDDTVVYFLSRTGNVVST 240
           K+VLVYGQ+PKLRFKVY STTGCWDDDVTLSRKVDDSIDFNFNDDT VYFLSRTGNVVST
Sbjct: 181 KIVLVYGQLPKLRFKVYHSTTGCWDDDVTLSRKVDDSIDFNFNDDTGVYFLSRTGNVVST 240

Query: 241 NMQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVV 300
           NMQRSPSKQYSSV+TNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRL+PVFSEYSIDVV
Sbjct: 241 NMQRSPSKQYSSVVTNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLMPVFSEYSIDVV 300

Query: 301 ECRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGD 360
            C+GEMLVVMLSEFLETASLRVWRY+EE+RTWHQIAALPPAMSHEWYGKK+DINCVGAGD
Sbjct: 301 ACQGEMLVVMLSEFLETASLRVWRYDEESRTWHQIAALPPAMSHEWYGKKIDINCVGAGD 360

Query: 361 QILICMNSNELYTYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEA 412
           QIL+CMNSNE  TYLLC+L+ENQWT L KCY NGEAVEFMSAFSFEPRIEA
Sbjct: 361 QILVCMNSNEHCTYLLCNLVENQWTELQKCYMNGEAVEFMSAFSFEPRIEA 411

[Close]

BLAST of Lsi04G013670 vs. TAIR 10
Match: AT4G33160.1 (F-box family protein )

HSP 1 Score: 414.1 bits (1063), Expect = 2.2e-115
Identity = 222/415 (53.49%), Postives = 287/415 (69.16%), Query Frame = 0


Query: 13  TRKRKRNEGENNML----SNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKRWKSVAASS 72
           T KRK  + E + +    S F +DDLN D+LERVLS LPTS FFR+SSVCKRWKS   S 
Sbjct: 45  TGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSK 104

Query: 73  SFKSACSDISARDPWFFMVDPHLN-RSIVFDSTEKNWKKLNYPNLLQNRHLDSMPVAATG 132
           SFK ACS I  RDPWFFM+D   N  S VFDSTE +WK LN  + L +   D +PVA++G
Sbjct: 105 SFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSG 164

Query: 133 GLICFRNS-SGNFIVSNPLTGSCSELPPVDLDQKNQSLHAIVMSADPDGCKGSYKLVLVY 192
           GL+C+R S SG+F++ NPLTGS  ++P  D +  N+ L A+ M+        SY LV + 
Sbjct: 165 GLLCYRCSISGDFLLRNPLTGSSRDIPSQD-NNNNKPLQAVAMTT-TTVTPSSYTLVTIS 224

Query: 193 GQVPKLRFKVYRSTTGCWDDDVTLS--RKVDDSIDFNFNDDT-VVYFLSRTGNVV--STN 252
           G++P L FK+Y S    W  D  L   +  D S+  +++ D+  VYFLS+ GNVV  S N
Sbjct: 225 GEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNN 284

Query: 253 MQRSPSKQYSSVITNKSGEDTVYFISSSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVVE 312
           +QRSPSKQYSSVIT     + VYF+SS GTI+AC+L+KRCF E P+LLP F EYSID+VE
Sbjct: 285 LQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVE 344

Query: 313 CRGEMLVVMLSEFLETASLRVWRYNEEARTWHQIAALPPAMSHEWYGKKVDINCV-GAGD 372
           C G M V++LSEF E+ASLR+WR +   R W Q+  LPPA+SHE YGKK DINCV GAG+
Sbjct: 345 CEGTMYVILLSEFFESASLRIWRLDNN-REWVQVGMLPPALSHELYGKKGDINCVGGAGN 404

Query: 373 QILICMNSN--ELY-TYLLCDLIENQWTVLPKCYTNGEAVEFMSAFSFEPRIEAS 413
           +IL+C N++  E+Y  Y + DL+  +W  LPKC+ +GEAV+F+SA SF+PRIEA+
Sbjct: 405 KILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEAT 456

[Close]

BLAST of Lsi04G013670 vs. TAIR 10
Match: AT5G20910.1 (RING/U-box superfamily protein )

HSP 1 Score: 344.4 bits (882), Expect = 2.1e-94
Identity = 175/274 (63.87%), Postives = 204/274 (74.45%), Query Frame = 0


Query: 404 SFEPRIEASFYSVICRVATVLKTRFTAPGFWLSGLKLFQFSLTLLSDHSERQHLEACVAQ 463
           S  P +   FY V+ RVATVLKTR+TA GFW++GL LF+ +  L+SD SE++HL++CVAQ
Sbjct: 48  SSSPSLRKQFYIVVSRVATVLKTRYTATGFWVAGLSLFEEAERLVSDASEKKHLKSCVAQ 107

Query: 464 AKEILHQIDNPSPASQSNSSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAES 523
           AKE L ++DN     Q   S+ GYLFEGHLTVD EPPQPQWLVQ NL+ +A A++   ES
Sbjct: 108 AKEQLSEVDN-----QPTESSQGYLFEGHLTVDREPPQPQWLVQQNLM-SAFASIVGGES 167

Query: 524 SQSLAENSNTSENATNILQALIENLDNSIDGFLDLDTASGPPRVPPASKEVVAKLPVITI 583
           S    E  NT     N++Q LI  LD  I   LD     GPPR PPASKEVV KLPVI  
Sbjct: 168 SNGPTE--NTIGETANLMQELINGLDMIIPDILD---DGGPPRAPPASKEVVEKLPVIIF 227

Query: 584 TDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT 643
           T+E+L K G + +C IC+ENL + DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT
Sbjct: 228 TEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPT 287

Query: 644 DDHAYESWKEREKEAEEERKGAANAVRGGEYMYI 678
           DD  YE+WKEREKEAEEERKGA NAVRGGEYMY+
Sbjct: 288 DDQKYENWKEREKEAEEERKGAENAVRGGEYMYV 310

[Close]

BLAST of Lsi04G013670 vs. TAIR 10
Match: AT1G27340.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-26
Identity = 92/366 (25.14%), Postives = 163/366 (44.54%), Query Frame = 0


Query: 36  QDILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFKSACSDISARDPWFFMV-DPHLNRS 95
           QD+ E V+SRLP + FF+  +VC++W ++  S SF    +++    PWF+ +   ++N  
Sbjct: 122 QDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSG 181

Query: 96  IVFDSTEKNWKKLNYPNLLQNRHLDSMPVAATGGLICFRN-SSGNFIVSNPLTGSCSELP 155
            V+D + K W     P L +   +  +P+A+ GGL+CF +    NF VSNPLT S  ELP
Sbjct: 182 QVYDPSLKKWHHPIIPALPKKSIV--LPMASAGGLVCFLDIGHRNFYVSNPLTKSFRELP 241

Query: 156 PVDLDQKNQSLHAIVMSADPDGCKGSYKLVLVYGQVPKLRFKVYRSTTGCWDDDVTLSRK 215
                 K  S  A+ M+ + +     YK++ V  +     ++VY S +  W    T+   
Sbjct: 242 ARSF--KVWSRVAVGMTLNGNSTSHGYKVLWVGCEG---EYEVYDSLSNVWTKRGTIPSN 301

Query: 216 VDDSIDFNFND------DTVVYFLSRTGNVVSTNMQRSPSKQYSSVITNKSGEDTVYFIS 275
           +   +  NF         T+ + L+    ++S +M     KQ+                 
Sbjct: 302 IKLPVLLNFKSQPVAIHSTLYFMLTDPEGILSYDMVSGKWKQF----------------- 361

Query: 276 SSGTIMACNLSKRCFVEYPRLLPVFSEYSIDVVECRGE--MLVVMLSEFLETASLRVWRY 335
                               ++P   + S   +   GE  MLV +L++   T  + +W  
Sbjct: 362 --------------------IIPGPPDLSDHTLAACGERLMLVGLLTKNAATC-VCIWEL 421

Query: 336 NEEARTWHQIAALPPAMSHEWYGKKVDINCVG-AGDQILICMNSNELYTYLLCDLIENQW 391
            +    W ++  +P     E+YGK + +NC+G  G  IL+ + S ++   +  + +  +W
Sbjct: 422 QKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLSLRSRQMNRLITYNAVTREW 442

[Close]

BLAST of Lsi04G013670 vs. TAIR 10
Match: AT5G15820.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.0e-19
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 550 NSIDGFLDL----------DTASGPPRVPPASKEVVAKLPVITITDEVLAKLGRDVQCAI 609
           +S+DG+  +          D  +G    PPASK VV  LP + +T E L+ +   + CAI
Sbjct: 236 DSVDGYAPMDYNAIIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSSV--SIVCAI 295

Query: 610 CRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHAYE 650
           C++ +   +K++ LPCKH +H  C+ PWL   N+CP+CRHELPTDD  YE
Sbjct: 296 CKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDDLEYE 343

[Close]

BLAST of Lsi04G013670 vs. TAIR 10
Match: AT3G02340.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-19
Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 559 DTASGPPRVPPASKEVVAKLPVITITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHT 618
           D  +G    PPA+K V+  LPV+ +  E L K G +V CA+C++ + V++K++ LPC H 
Sbjct: 299 DDETGIRGNPPAAKSVIQDLPVVELAVEELDK-GNNV-CAVCKDEMLVEEKVRRLPCSHF 358

Query: 619 FHPPCLKPWLDEHNSCPICRHELPTDDHAYESWKEREKEAEEERKGAANAVRGGEY 675
           +H  C+ PWL   N+CP+CR+ELPTDD  Y    ER K +E    G A  V  G Y
Sbjct: 359 YHGECIIPWLGIRNTCPVCRYELPTDDLEY----ERHKSSERGDTGLARNVLPGRY 408

The following BLAST results are available for this feature:

BLAST of Lsi04G013670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMZ3	3.1e-114	53.49	F-box only protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBX13 PE=2 SV=2	[more]
Q8RXD3	3.0e-93	63.87	E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV...	[more]
Q9FZK1	3.5e-25	25.14	F-box only protein 6 OS=Arabidopsis thaliana OX=3702 GN=FBX6 PE=2 SV=1	[more]
Q6GPV5	2.1e-17	40.19	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1	[more]
Q8LPN7	2.1e-17	46.99	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of Lsi04G013670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VE16	9.7e-228	94.43	F-box only protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A1S3BVJ2	9.7e-228	94.43	F-box only protein 13 OS=Cucumis melo OX=3656 GN=LOC103493720 PE=4 SV=1	[more]
A0A0A0L096	6.9e-226	93.22	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G650190 PE=4 ...	[more]
A0A6J1F7Z8	2.1e-222	91.73	F-box only protein 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442977 PE=4 SV...	[more]
A0A6J1INV1	4.8e-219	90.27	F-box only protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111477227 PE=4 SV=1	[more]

BLAST of Lsi04G013670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900148.1	4.0e-228	94.90	F-box only protein 13 [Benincasa hispida] >XP_038900150.1 F-box only protein 13 ...	[more]
XP_008452809.1	2.0e-227	94.43	PREDICTED: F-box only protein 13 [Cucumis melo] >KAA0064556.1 F-box only protein...	[more]
XP_004141357.1	1.4e-225	93.22	F-box only protein 13 [Cucumis sativus] >KGN55400.1 hypothetical protein Csa_012...	[more]
XP_022936324.1	4.3e-222	91.73	F-box only protein 13-like [Cucurbita moschata]	[more]
KAG6591505.1	1.4e-220	91.24	F-box only protein 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi04G013670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33160.1	2.2e-115	53.49	F-box family protein	[more]
AT5G20910.1	2.1e-94	63.87	RING/U-box superfamily protein	[more]
AT1G27340.1	2.5e-26	25.14	Galactose oxidase/kelch repeat superfamily protein	[more]
AT5G15820.1	1.0e-19	41.82	RING/U-box superfamily protein	[more]
AT3G02340.1	1.3e-19	43.10	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 648..668
None	No IPR available	GENE3D	1.20.1280.50		coord: 24..72 e-value: 1.3E-8 score: 36.6
None	No IPR available	PANTHER	PTHR46301	F-BOX/KELCH-REPEAT PROTEIN	coord: 25..412
None	No IPR available	PANTHER	PTHR46301:SF40	F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN	coord: 25..412
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 591..644
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 34..74 e-value: 1.2E-5 score: 34.8
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 29..70 e-value: 3.4E-8 score: 33.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 28..73 score: 11.828977
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 597..637 e-value: 1.7E-6 score: 37.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 596..638 e-value: 2.1E-12 score: 47.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 597..638 score: 12.666314
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 560..644 e-value: 1.2E-20 score: 74.9
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 94..341
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 23..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G013670.1	Lsi04G013670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding