Lsi04G013610 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAGATAATAGTTTTAATTAATTTTTTCCCTTAGGTTCCTAACAAACCCAAAACCCAAAAATTGCAACAGAATCCTCCCCTGTTTTTCCCATTCTCTGTCGACTCGTCGTTTTCTCCTTTAAACGCTTCTTAAGCTGTCTCCTCTTTTCCTTTTCCTTTTTCCTTTCATTTCCATTTCCCCTTCTATTCTTCCTTCTTCTTCTTCTTCGTCATCTTCCACCAGGTACTATCTCTTTCTAGAATCTCATCTCTGGAAGACTTCCTCTATTTATCTTCACGTTTGTTGGTCTAACTTGTTGATTCATTCGCTGTATGGTTGTAATTATTGCTCCAATTATCATCATCGCTATCTGAAATTTCCGCCGATTTTTTTTCGGCTTCACATGGCGTAGCTTGTTCTTGGAGATATAAGATCCGTGTTATTGCAATATTTTTGCGGCTTCTTCCTGTTTATTGTGTAATCTGAAATCGGAGAGTTGTGGTTGTGGATATAATTGCAGGTTCCAGTTCAATTTGGGTAGTTGGGCAGCTCCACGGGCATGTGAGGAACGGCTTATTCCTTCCACGTATTTAACCATAGCTACTAGATATTGTTTGTTAGTTTTCTTTCTTCTTTCTTCCATTTTGATCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTAGACAATATGGGCTATCTGAATTCAGTCTTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCACCTGTAAGCGGCGGAGGACTAAGGTAGATTCGTAGTTTTTTGTTTGTAAATCTGCCTGGTGGATTCATAGCTGTTTGGATTGATTTGTGGTTTTGTTTTAATTTCGATTTCGAAAGAACAGAATCTTATTAAAGTTTCATCGTGCTTTCTGAGTAATATTATTCCTTATTGTGTAATCGATTGGGTTTTGTAATTTATCGATGTTTATTTAAAGTGCCTTTAATTTGAGATTCCTTGATGATTATCTTCTTCTCTGAAACTTATGCGTAGTCCCTTCGTCAATTCAAGTTTGCGATTGACTGGCAAGGATAATGTTGATTTGAAGTACCCCTGGCTCCAGTTGAAGGAATAAATCTCAATTTGAGGACGGTGGAGGTTGAAGTTTTTTCTGATGTGGTTTTATTGTTAGATAGATGGTTTTGATTGTAGGGCGTTCTTGGATTGTTTCTTTAATTTCTCTACATATTTAAGAATTTGATTGTTTAATTTTCATTATGAGTCATTAGAGAATAGAACCTTCGGTATACTGAAAATATCTTTTTACTTGATGCAGTCAGAATGGAAAATTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATAGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTTGATGGTATGTCAAATTTTTGGTCGCTCATCAATGTTTATATCTAATTTGTATTACAGATATGGTGATTTCTGGTGATATACAGCTATATTTTGATATGTATTAAATCTTTCTCCCGAGGCTGCTCTTACATCTGGTAATCTCAAGGAAGAATTCTAAATTTTTCCCTTTTGTGGTCTCAGGTCATGGCGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTCAGTAACTTGATCAGGCATCCAAAGTTCATATCAGATACCAAATCCGCTATAGGTATGTTGCTTATTTTGTTCTCATTGTAAGCCTAATCTTCTTTAATTTGCTCCCTAACTAAGAGATGATTGTTCTTGCACAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGCTTACTTGTTGCAAATGTGGGTGACTCTAGAGCCGTTATTTGCCGGGGTGGCACTGGTGAGAATGTTCATTCATTTCCATGTTTTTTTTCTGAGGGTTTCCCGACCTTCTCCTCTTTTTGAAGTTTGGTTGATCATAGTTTGTAAACTTGTTGCTGCATAGTTTCATGACAATGTTTTCTTTTAAATTCATATTCTGGTAGACCTGTTTGGTTATTGGAATTTCGTCTTTTAAGTAACGTGATCCAATTTTTTATTCTATAAAACATTGGAATGATTTTGGCGTAGACTACAAGTTTGTGAAAAGAATTATTGCATTGCAATTTTAGTATAGATGCAATACCAGATCTGATTCCTTCAATGATACTTTTACTTGCGGATTAGAGGCTATCCTTGTTCTTTCTTAGTATTAAGAGGAACATGGGACATGTTTTGAACTTTGAAGAAGGAAAGTCCCTTGATCGTTCTCCCTCCCTTACTCTCTGGTAATGGAAGCAGACCATCTTCTCTTCCATGGGAGTGTTTATAAAGTTGATAAAACAAAAAATCCTTCTTGCTTTTAATATATCAAAGATATGTCCCCTTCTTGCCGCCTTCGTTACCTGACTTTAGTTTCTGCCACTTCCTCCCCTTTTTTTTTCTATTGCAATTTCTGGATTATTATACAATGTTTTTTTAACTTTCCATATATATGATTAATATTTGACTATTTTACATATATGATTAATATATGACATTTCTTATCTCAATGCCAGTAAGGATTTGTTAAACCTGAACGATTAAATGCTTGTAACTCTTTAACCTCAGTTTCAATTATTTTACCCTAATATCTTTTATTTTTATATAGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACAACGAATTGAGGATGCTGGAGGATTTGTGATGTGGGCTGGTGAGGTTATCATATCCTTTAGCGTAACTTTTAAATAGAGATGCTGATCGCATTTTAATCATTGGAAGCTCAATGAACAGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGTACATTTTACGCTGTCTTCAATATGTAGAGTAAATTGGTGTGACTATTCATAGAGACTGTTGCTTAACTGCATTATGGTGAAAAGAACGAAATATCAGGGAATATGCACCAAAATTAATTTGTATTATATGCATCATATATGACATTCATGTTCATGGATGGGGGGTGCATCAACATGAGTTACATCCGTATCTTACGTGAGAACTGTATCTTGTTTAATATAAGTGCAATTCTGTTCTGTTGATTAAGATGGAACTTTTTTCTTCAGGTAGATATAGAAACGCAACGGAGAACTAGTAACAATCCCACAATATTCCACACAAAACATTTGGTTTTACTTAAATTTTGCTTTAGGTTTTTTTGGAGCACAGAGTTCACTAAATTATGACCCCCTTTTATATTACATTTTCTTTCATGTCCATCTCTGTAGTTTGAGAAAAACAAATACGCTGAGATATAGAAAACTAAATAAGAATCTTCCATACAAATATGGCAGTGATGAGAAGCTTAAATTTTTAAATGATAAAAACTTCCGCAACTTCTGAGGTTTGGTTTGAAAAGAGTTCAATTGTTGTTCCTGGTTGATTTGAACTTTGAATCTTTTTTCCCTGACTTGCAATTTGTATTGGTCGATGCTTGTATATTATAAGTCTCTATCGTGGGAAGATGGTCGTATCTCTAAATCTAACATTCATATTCATTAGGATCCGTGTCTAACTTTTTAGATTCCACGAATTAACTTACAGGAGGAAAAGATTGATAGCTCACTCGAGTTTCTTATACTTGCAAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGTTTGCAAGTCCTTTCATTTCATTTACCGTCAATTTACAACTCTCAATTTTGATGTCAAATTGCAAGTGCTAGAAAACATCCATGACTCCTCGCGATCTGGTTGGTTGGTCGGAGCCTCATCTTGAACAGTAAAGTTTATCAAATGTTCTATTCCTTCTTCAGGAAGCTGTTGCAATGACTAAACCAATTCAGGACCCAGAAGAGGCAGCCAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGTGTCGTCGTTCGCTTCTTGGCAAATCAAGGAAGTCCCTCTCTTGGAACATCTGGGTAAGACTGATTTTCCTAGCTTTTCACCCTCTGGTTCTGACTCGTCCGAAAGTCTCAATATTACTTCGGTGATTCATAGTCAATAGGAAATTCCAGTAACATTGTTGATTGTACTTATAAAAAAAAAAGGATAGACATAACGAGAAGTTGTCAGGTTGGTTTTTGTGCAATATACGTGTCTTGAGTTGCTGCCTACATAGTCCTTAGCTTCCTGTCCGGAGGTTGTAGAAATGTGCAATTGGTTAATTTGTAAAGAGTCTTTAATGGAAGTGTTATTGTTTCTCTTGTCTTCAACCTTTCCTAAGGTGGCTTTTTTCTTCTTTTTTTTTTTTTCACTTCTTCCTCCTTTTGGGTTAGGTGTGATTTTTTTTTTTTTTAAAAAAATAGTATAACTTGGGGAATACAGTTGTATCAACTTTCTTTTCTGGTTGAGGGAATTTGATCCCACGAATTTTAAAGAAGGTACTAATATCTT CAAAAGATAATAGTTTTAATTAATTTTTTCCCTTAGGTTCCTAACAAACCCAAAACCCAAAAATTGCAACAGAATCCTCCCCTGTTTTTCCCATTCTCTGTCGACTCGTCGTTTTCTCCTTTAAACGCTTCTTAAGCTGTCTCCTCTTTTCCTTTTCCTTTTTCCTTTCATTTCCATTTCCCCTTCTATTCTTCCTTCTTCTTCTTCTTCGTCATCTTCCACCAGGTTCCAGTTCAATTTGGGTAGTTGGGCAGCTCCACGGGCATGTGAGGAACGGCTTATTCCTTCCACGTATTTAACCATAGCTACTAGATATTGTTTGTTAGTTTTCTTTCTTCTTTCTTCCATTTTGATCGAAGAGATTGGAGCTGGGCATTTTCAGAGCCTAGACAATATGGGCTATCTGAATTCAGTCTTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCACCTGTAAGCGGCGGAGGACTAAGTCCCTTCGTCAATTCAAGTTTGCGATTGACTGGCAAGGATAATGTTGATTTGAATCAGAATGGAAAATTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATAGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTTGATGGTCATGGCGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTCAGTAACTTGATCAGGCATCCAAAGTTCATATCAGATACCAAATCCGCTATAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGCTTACTTGTTGCAAATGTGGGTGACTCTAGAGCCGTTATTTGCCGGGGTGGCACTGGTGAGAATACTACAACCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACAACGAATTGAGGATGCTGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCACTCGAGTTTCTTATACTTGCAAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCAATGACTAAACCAATTCAGGACCCAGAAGAGGCAGCCAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGTGTCGTCGTTCGCTTCTTGGCAAATCAAGGAAGTCCCTCTCTTGGAACATCTGGGTAAGACTGATTTTCCTAGCTTTTCACCCTCTGGTTCTGACTCGTCCGAAAGTCTCAATATTACTTCGGTGATTCATAGTCAATAGGAAATTCCAGTAACATTGTTGATTGTACTTATAAAAAAAAAAGGATAGACATAACGAGAAGTTGTCAGGTTGGTTTTTGTGCAATATACGTGTCTTGAGTTGCTGCCTACATAGTCCTTAGCTTCCTGTCCGGAGGTTGTAGAAATGTGCAATTGGTTAATTTGTAAAGAGTCTTTAATGGAAGTGTTATTGTTTCTCTTGTCTTCAACCTTTCCTAAGGTGGCTTTTTTCTTCTTTTTTTTTTTTTCACTTCTTCCTCCTTTTGGGTTAGGTGTGATTTTTTTTTTTTTTAAAAAAATAGTATAACTTGGGGAATACAGTTGTATCAACTTTCTTTTCTGGTTGAGGGAATTTGATCCCACGAATTTTAAAGAAGGTACTAATATCTT ATGGGCTATCTGAATTCAGTCTTGTCTTGCTCGAGCCAGATTCATGCTGCTGAGGAGGCACCTGTAAGCGGCGGAGGACTAAGTCCCTTCGTCAATTCAAGTTTGCGATTGACTGGCAAGGATAATGTTGATTTGAATCAGAATGGAAAATTCAGCTACGGATATGCTAGCTCTCCAGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGAATAGATGGTGTGGAAGGAGAAATAGTTGGTCTATTTGGTGTTTTTGATGGTCATGGCGGAGCACGAGCTGCGGAGTATGTTAAGCACAATCTTTTCAGTAACTTGATCAGGCATCCAAAGTTCATATCAGATACCAAATCCGCTATAGCTGATGCATACAACCACACAGACACAGAATTTCTGAAGTCGGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGCTTACTTGTTGCAAATGTGGGTGACTCTAGAGCCGTTATTTGCCGGGGTGGCACTGGTGAGAATACTACAACCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACAACGAATTGAGGATGCTGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCACTCGAGTTTCTTATACTTGCAAGTGATGGACTGTGGGATGTCGTCTCTAATGAGGAAGCTGTTGCAATGACTAAACCAATTCAGGACCCAGAAGAGGCAGCCAAGAGGTTGATGCAAGAAGCATATCAGAGAGGCAGTGCAGATAACATTACTTGTGTCGTCGTTCGCTTCTTGGCAAATCAAGGAAGTCCCTCTCTTGGAACATCTGGGTAA MGYLNSVLSCSSQIHAAEEAPVSGGGLSPFVNSSLRLTGKDNVDLNQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTGENTTTIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMTKPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSLGTSG Homology
BLAST of Lsi04G013610 vs. ExPASy Swiss-Prot
Match: Q8RXV3 (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana OX=3702 GN=WIN2 PE=1 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 6.4e-139 Identity = 260/315 (82.54%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy Swiss-Prot
Match: Q4PSE8 (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana OX=3702 GN=At5g24940 PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.1e-126 Identity = 237/315 (75.24%), Postives = 263/315 (83.49%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy Swiss-Prot
Match: Q8LAY8 (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana OX=3702 GN=At5g10740 PE=2 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.1e-125 Identity = 237/311 (76.21%), Postives = 258/311 (82.96%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy Swiss-Prot
Match: Q67UX7 (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0149800 PE=2 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 2.0e-124 Identity = 231/299 (77.26%), Postives = 255/299 (85.28%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy Swiss-Prot
Match: Q7XR06 (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0659500 PE=2 SV=2) HSP 1 Score: 434.9 bits (1117), Expect = 7.9e-121 Identity = 227/309 (73.46%), Postives = 255/309 (82.52%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy TrEMBL
Match: A0A5D3D967 (Protein-serine/threonine phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001480 PE=3 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154 Identity = 288/316 (91.14%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy TrEMBL
Match: A0A1S3BUQ3 (Protein-serine/threonine phosphatase OS=Cucumis melo OX=3656 GN=LOC103493724 PE=3 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154 Identity = 288/316 (91.14%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy TrEMBL
Match: A0A6J1C9U7 (Protein-serine/threonine phosphatase OS=Momordica charantia OX=3673 GN=LOC111009644 PE=3 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 7.4e-154 Identity = 288/316 (91.14%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy TrEMBL
Match: A0A0A0L0A3 (Protein-serine/threonine phosphatase OS=Cucumis sativus OX=3659 GN=Csa_4G651230 PE=3 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.8e-153 Identity = 287/316 (90.82%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of Lsi04G013610 vs. ExPASy TrEMBL
Match: A0A6J1FLU1 (Protein-serine/threonine phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111446593 PE=3 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151 Identity = 284/316 (89.87%), Postives = 288/316 (91.14%), Query Frame = 0
BLAST of Lsi04G013610 vs. NCBI nr
Match: XP_038898932.1 (probable protein phosphatase 2C 59 [Benincasa hispida] >XP_038898933.1 probable protein phosphatase 2C 59 [Benincasa hispida]) HSP 1 Score: 554.7 bits (1428), Expect = 5.2e-154 Identity = 289/316 (91.46%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. NCBI nr
Match: XP_008452813.1 (PREDICTED: probable protein phosphatase 2C 59 [Cucumis melo] >KAA0064560.1 putative protein phosphatase 2C 59 [Cucumis melo var. makuwa] >TYK20030.1 putative protein phosphatase 2C 59 [Cucumis melo var. makuwa]) HSP 1 Score: 553.5 bits (1425), Expect = 1.2e-153 Identity = 288/316 (91.14%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. NCBI nr
Match: XP_022138481.1 (probable protein phosphatase 2C 59 [Momordica charantia] >XP_022138485.1 probable protein phosphatase 2C 59 [Momordica charantia]) HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153 Identity = 288/316 (91.14%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Lsi04G013610 vs. NCBI nr
Match: XP_011654214.1 (probable protein phosphatase 2C 59 [Cucumis sativus] >KGN55405.1 hypothetical protein Csa_012704 [Cucumis sativus]) HSP 1 Score: 551.2 bits (1419), Expect = 5.8e-153 Identity = 287/316 (90.82%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of Lsi04G013610 vs. NCBI nr
Match: XP_023524320.1 (probable protein phosphatase 2C 59 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 549.3 bits (1414), Expect = 2.2e-152 Identity = 286/316 (90.51%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of Lsi04G013610 vs. TAIR 10
Match: AT4G31750.1 (HOPW1-1-interacting 2 ) HSP 1 Score: 495.0 bits (1273), Expect = 4.6e-140 Identity = 260/315 (82.54%), Postives = 274/315 (86.98%), Query Frame = 0
BLAST of Lsi04G013610 vs. TAIR 10
Match: AT5G24940.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 453.4 bits (1165), Expect = 1.5e-127 Identity = 237/315 (75.24%), Postives = 263/315 (83.49%), Query Frame = 0
BLAST of Lsi04G013610 vs. TAIR 10
Match: AT5G10740.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 449.5 bits (1155), Expect = 2.2e-126 Identity = 237/311 (76.21%), Postives = 258/311 (82.96%), Query Frame = 0
BLAST of Lsi04G013610 vs. TAIR 10
Match: AT1G43900.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 339.3 bits (869), Expect = 3.2e-93 Identity = 171/295 (57.97%), Postives = 219/295 (74.24%), Query Frame = 0
BLAST of Lsi04G013610 vs. TAIR 10
Match: AT5G53140.1 (Protein phosphatase 2C family protein ) HSP 1 Score: 320.1 bits (819), Expect = 2.0e-87 Identity = 156/271 (57.56%), Postives = 210/271 (77.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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