Lsi04G013540 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G013540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr04: 21288519 .. 21292346 (-)
RNA-Seq ExpressionLsi04G013540
SyntenyLsi04G013540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTATCTCTCTAGCTAAATTCATTATCCCGCTCTTCCGTCTACTAAGATCTCTATCATTTACATCTTTTTTCAATTTGACAAATTTCTGGAAAAAAAAATGAAGAAAATTTCTAAATGTTATTTAAAATTAATGAATACATTTGCTTACATTTTTGTGATGTGTTGAAAATATTCATATCAGACTTTCCCGTTTACAGATGTCGATGTTCACATTAGTAGCTTTTTTTTTATTAACCACCATGGATTGACCTAGTAGTAAATAAGCGGGCCTTTTTTTCTTTTGAATTACAGGAAATGATTCAATCTCGAACTGGCCTGACTATTTGAGAGACATAACCATGATAAAAGGCTTAACAAATCATGGGTTCAATCCATAGTGGCTATTTACTTAGGATTAAAGTCAGCTTACGTGCGCATGTCAACTAATCTTATAGGACTAACCTATCTATCTCTACAATATTTAGATGTTAAGAAAACCCATAGAATATTAAATCCTATCAAATTCGTGTTTCCTATTTAGGTCACTGCTTGGAAATTTTTTTTTGTTATATTTAAGACCTTTTTAACTTATAAATGTTAACAAAGATCTCTTGGACTTTCTTTTGTACCAAAGACAGGTTAAATTTTTATTTAAAGTGAAATTTTCAGTTGGTTCATGCAGGTATTATCACGCATCACAAAGCTAACGATGTCAAAGAAGTTGAATCAAACCACTTTGTGTGAGCCAAATCAATATGAAGTGATGACTGAACAGAACAAATTTTACTAAAATTCAGAAATATTATACATATCTGTACTTCAAAAAACATTAGAACAGAAACAAGCCTGTGCAATTGAGTCGCACGCTGACTGCTAAAATACAATAGAAATCATGAGACGAAGCAACCTTTTTCATTTTCACTATGAAATTATCTCTAAAACTGCGCTACGACCTATTCTTCTTTTTTTTTTAAAAAAAAAATGAATGAAAAATAATAGCTTGACCTTACAGACCAGGCAGCACCCAATCAAACTATTTAGAGATGGGGGGTTCTCCCAACCACTTGGCCCGGTAGCCTGTTCCCTTACAGTCGGAGCAACGCATAGAGCCCTGAAAAATGATGCCAAACAAAATTGAAACTGAGTACTTTTCTTTTCTTTTTATTTTTGTAGGGTACAATTGGACTAGGGAAATTCAAACACGTGTGTGAAATGAACCATACTTGATTTTGTGAAACCGAGTATTTTTAAGGTACTGCAATTGAAAGTAACTAATACTTATTCAGTAAATATCTCTTAATAAATAATAAAGAAATTTTCATAAATAAAAAAAATGTTAAACTATTTATAAAAAATAGCAAAAACAAATCACTAATAGACATTGATAGACTTCTATCACAGTCTATCATTGATAGACCATGATCATTTATCGCAACTATCTACAAATATTAATATTTTGTGTAAATAATTTTCCTTATTTTTTTCTCTTTTTAAAAATTCTCCTAAATAATACTTATTCAGTAAATATCTCTAAAATTGACCACTTCCTAAATGTTAAAACTAGAAGAAAAAACAATGTAGTGAGAAAGTATTACATGAATTTGAATTTAAATTGTATTTAGTATAGCACATGGGAGGATTTTAGATGATTAAAGCGTTTCTTTAAAAAAATTAATAAATAAAACTTACTTTAAAAGTGGATTAATTCTTAATCTATTTTTGAACAAAATACATGAAAAGTTATTCAAAATTAACTTCAAAGTGTCCGTTTAAAAAAAAAAGACCTCAAAGTGATCAACCGAAAATCCTTTATACAGTGAAGGAAAAAAAAACATACTCATGGATTACATGATCGTTTTTTAATGTAGCGTAACCATACAAAATTGTTATTTAAAACACTTTTTAAAGTAGGTAAGATGTAAATAATAATAATAATAATAAAATAGGCGTGGGTGTAAGGAAGTTAGTAATAGAAAGTGTACAGAGAGAATGGGGGAAGAATGCTAGAAAATGTCAACTGTGAAGTTGAGTGATGAGTGCTAGTAGCGTTCAAAAAGTAAGGTAAAAAACTTGGCAAAAGAAAATAAATAGAGGTACAAAAAGGAAAGTATGCACTGAAGGACGAAGGCCAAGACATTCGAGCCAAAAATAGAAGCACACTGATTTCTTATAGCCAATATGGGCAATGTATAACTCAACTAGTTCAAGACAGACCTTGGCGGTCTAGGGTTTAAAATAGTGTTCTAACAAGGTAAAAAAGCGTTACGAAGTCCGCATTTGATAACGGTTTGATTTTTTTAATTTTTGGTTTTGAAAATGGTACTTATTTTCTCACAATTTCTTAATACAAATTTACATCTTTCCTATGTGAACTTTTGAATTCTTAGCCAAATTATATATGTATATAATAAAAAATGAAAAACAACGACAAATTTTTAAACACTACTTGATTTAGTTTTCAAAACATAGTTTAAATTTTGAGTACAATCCTCAAAATGTAGACAACAAAACAAAGAAACTAGATGAAAGTAATACTTATCACTTAATTTTTAAAAATCAAAGGTTTATCGAACCTAAATTATCCAGATTAAATTTAAGAGCCTTCAAAGTATGTAAAAGCGCTTTCAGTCATAATACTTGAGGGAGAGAGCTCTTAATAATTTAAAAAGTTATTTCTAGTGGTTAAAAACACTTTGACCTGCCTCAAATGTTATGTAATATGTAGGAGTACAGGTTAAAAATACTTAAAAAATAAAAAATAAATAAAATAAAAGTAGTAATTTGGACTTAAACGCTCATTCTTAAATACTTTCTACCCACACTTTCTCACGCTAGCTCATGATTTTACATATTTATCTCACCAATTTCTATACGCACTAAAATACTGTAACTTAGTTTTAATCCTTTTTTTTTTTTTACTGGTTTGTCCATTCTAAAAATATTTGTTTTAAGTATTAATTATTACAAAAATACTTTTAATTAGATAAAAACACCACAAATTGTTCTACTATTAACATATTTATCAAACACCACAAATTGTTCTACTATTAACATATTTATCAAACACCACAAATTGTTCTACTATTAACATATTTATCTGATATATTTCTATAAAAGCACTTCATAGCATGATAACAACAGCAAACACACCGTGAAGGGGGTTCAAAACACATCCAATGATCCAAGAAAAGAAAAGGTAGAGATCAAACCAGTTTCGTGATTACCTTGCCAGCACAAATGACACAGCTAGTGTTTCTGGAAGGAACTTGACAAAGCATATTATCTCCGAGAATAAAGAAGCCAGTTCCTGTACACCATTTACACTCAACATGTCCATTTGAGTTGCAAGAAGAGCAGCAAATAGGCGTTGGTTGCTGTCAACGTATAATTAGGGTTGTTAGACTTTTCATGATGTCGCATTCAATTCATCTTAAGTTCGAACAGGAACACATGGAATGACGGAATAGTTTTTTCTTCTAAATATTGTAAATCATGTTGCAATAAGATTAAATATGATGAACAGGAAACAAATATAAGCTATAGTTCCAAAGAATTTGAATATTCTCCTACTAAGTTTGTAAAGACAGATGTTAATTTTAAACTGCAATATCATGACAGAAGAATCATAGGAAATTCATCGGTTCCTACGCCTGATCATGTTACGGCAGAAAAAGAACGTTAGCACTTGAACCTGCGCGCGTTATGTTATGAGGACTGGTTTCTAATCTTTGCAGACTACGTTAGGTTCAGCGGATCACGATTAGGCATTTTGCGGTTCCTCTTCCTCCTCCTGACTACGAAAACGTAGGAACAGAATGTAAGCAAACAGGCTCGTTGAATTAG

mRNA sequence

ATGCAGGGTACAATTGGACTAGGGAAATTCAAACACCATGATAACAACAGCAAACACACCGTGAAGGGGGTTCAAAACACATCCAATGATCCAAGAAAAGAAAAGGTTCAGCGGATCACGATTAGGCATTTTGCGGTTCCTCTTCCTCCTCCTGACTACGAAAACGTAGGAACAGAATGTAAGCAAACAGGCTCGTTGAATTAG

Coding sequence (CDS)

ATGCAGGGTACAATTGGACTAGGGAAATTCAAACACCATGATAACAACAGCAAACACACCGTGAAGGGGGTTCAAAACACATCCAATGATCCAAGAAAAGAAAAGGTTCAGCGGATCACGATTAGGCATTTTGCGGTTCCTCTTCCTCCTCCTGACTACGAAAACGTAGGAACAGAATGTAAGCAAACAGGCTCGTTGAATTAG

Protein sequence

MQGTIGLGKFKHHDNNSKHTVKGVQNTSNDPRKEKVQRITIRHFAVPLPPPDYENVGTECKQTGSLN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G013540.1Lsi04G013540.1mRNA