Lsi04G013130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G013130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Beta-glucosidase
Location	chr04: 20847998 .. 20851064 (+)
RNA-Seq Expression	Lsi04G013130
Synteny	Lsi04G013130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGTTTCACTTTTTAGGCTAATTGAAAAAAAAATTATAGATGAAAGAAGAATGTGAGAATTTTAAAAGATTAAGGAAAATTTTAAAAATTGCTTGGTGGCCATCTGATATATTTAGCAAAAATTAAATTACAACTCTTTAAATATTAAAAAGAAATCTTATTTTTGGTTCATTCAGTTTCTAAGTTTTTTTTTTTTTTTCATTTGGTCATATTTAGACTTTTAACACCATACATTGTACATGGTAGGCCAAATCCAAACCAAATAATTGAAAACATTTTTTTAAAAATAATTGGAAATGTTGATATTCTTAAATTTTTTAAAAAAATAATAATCATAATTAGAACCTATAGTATTATGCTAGACAAGTGGCCAGATAGGTGAAAAAAAAATTAAAAACATGCTTTAAAATAAATTAAATAAAACTCAAATTAGTCATCATTGCTTAATTTATAAAGTGTATATCTTCGATAAAAAAAAGTTTAATGTTCAAATTTTCGTGTCTCATGTTATACCAAAAAAACAAATAATAATAATAATAACCTTGTGTGTTAGGTATAATACTTCTATATTATTATAGCATTTAAAAGTTTAAGGATTGTTTTTTGGGAAATTTTTATAAATAAAAAAAATGTCAAACTATTTATATAAAATAGCAAAAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGATCTTGATAGACTTCTATCAGCGTCTATCACAACTATTTAAAAATTTTGTTATTTTGTGTAAATAATTTACCTTATTTTTTTATTTTTAAAACTTCCTCTTGTTTGTTTTGTTTGTAGAATTCTTTCCCTTCGTGTACAATACAATATTTGCGAAAACATACTTTGAAGAAAAATTCAAAATATAATATTGGATCATTTTAATTTCTTATCGTTTCTTCTTGATACTCCATCACGAGTAACTTTTGATAAGAATACATTAGAAATCTTTTTAGAAATAAAAATACATCTCAAACAGGTAATTAGAGGTGCTTATATAAAATTTTCTTTTGGAACATGAATAGGGTGTATGATCCTATAGTGTATGGAGATTACCCTAAGGAAATACGAGAAATTTTAGGAAGCCAACTTCCAACTTTTTCAGAGTCGGAGAAAAATCTTATAAGAGGAAGCTTGGACTACATTTGTGTCAACCACTATACAACATTTTATACAAAAGATTGTATTCATTCTACCTGCTCTTACGGTGGAGATCATCCTATAAAAGGATTTCTTAACACTACGGGATATCGAGATGGTGTTTCCATTGGAGATCCAGTATGCTCTTTCCTCTCTCTTTAAAGTCTTGTCTTTATTTTAATTTCACCAAAATTTTAAAAAGTTCTATTTAATCCTTCATGTTTTAATAAGTTTCAAATTTAATACTTAAAGTTAAAATGTCATTAGGAACTAAACTAAAAATAGAAATGGTGATCATGATTTTATAATTATACGAAGGTAGTAATTAAGTGTAATAATATAAATATGTATATTATACGAATCGCTAGAAGTGAGCATAGTTTAATTATAATCGACATGTACTTAAAAAAAATGTTTAAATTCTTCTACCTCCATTTGTTATACTGAAAAAAAAATTATACAATACGTCCTTAGAAAAAGAAGTTAGAGTAAAACATGTTGAATGATTAAAATAAGAAGAAAAAAGTTTTAAAAATTGCATAAACTAATTGTTTGGAAATTGTGAATTATTTGAAGAAAACAATTCTGATTTTAGTTATTAAATTTGTTATATTGTATATGATAAACAAGTGATCATTAAAATTTCCAAATAATAATTTAAAAAAAACGTAGGACAAGAGATGAAAACTTCTTTACTAATAATATGTGAGTATGCAAGTGACGAGATTATCTTTTAAGTTTGTGAGCATAATTTAGTGATAATTGACGTGTACTACCTTCTTTCAAGTTGGATGTTCAAATATTCACTTCTCTACTTGTTATACTAAAAAGTAACAAGATTACCGTTTTATCTAACAGACAGGAATAGACATATTCTTTGTTGTTCCAAGAGGTTTGGAAAAAATCATTAACTATATCAAACAAAGGTATCCCAACAAGCCCATCTTTGTCACTGAAAATGGTAAGTTAAGTTAAGTTGAAAGCATGTGTATGATTAAAATTTTCATTATATTTAACCAAATTACTTACAAGTTTTAAGATATTGACTTTTTTTTAAAAGGATATTCTACACTACCAGACGATGGTAAGAAAGTTGAAGACATAATAAATGACACGAAACGAGTCAATTACCATAAGAACTACCTTGCTTCCTTGGCTAGAGCAATGAGGTAAATAAAAGGTTAAAGAACATTTTTGGTCCACGAGCTGTTAATTTAGTCTCTAAACTATAGTTGGTAATGATTTAGTTCATGTACTTTCAAATCTGTTACAATTTAATCCATAAATTTCAATAGGTAACAATTTAGTTCCTGTACTTTAAAAGTTGTAACAATTTAGTTAATCCATATCATGAAAAATATCATCTAAATTAACTATCTTTTTTATTATGTAATAACATTTTCTTGATAGTTTATTAAAAAAAAAAAAAAAAAATTGATCTCCGAACACAGTTTATTTTTTTACTAAATCCTAACAAAAGTTTTATAGGAAAAAGGTCATTACAAATTATAAAATATAGAGACTAAATTGTTACTTATTTATGTTGACTAAATATGTTATAAATTTGAAGTACAAAGACGAAATTAATGTATGGATTACATTATACATTATGTTATAAATTTTAGTGACATTTTATGACAGGAATGGAGCTGATGTGAGAGGGTATTTTGTATGGTCTTTAATGGACAACTTTGAATGGGCCGATGGGTATGCCAAGAGGTTTGGGCTTTTGTATGTGGACTTTCAGACACTTGAGCGACGGCCCAAACTTTCGGCCCAGTGGTTTGCTTCTTTCCTCGGCGGCAACCTTACTAAATCTTCCTCCATTCTAAATCAAAATGACTTCGATTCTCTGATGGATAATTAA

mRNA sequence

ATGGGCAAGGTGTATGATCCTATAGTGTATGGAGATTACCCTAAGGAAATACGAGAAATTTTAGGAAGCCAACTTCCAACTTTTTCAGAGTCGGAGAAAAATCTTATAAGAGGAAGCTTGGACTACATTTGTGTCAACCACTATACAACATTTTATACAAAAGATTGTATTCATTCTACCTGCTCTTACGGTGGAGATCATCCTATAAAAGGATTTCTTAACACTACGGGATATCGAGATGGTGTTTCCATTGGAGATCCAGATATTCTACACTACCAGACGATGACACTTGAGCGACGGCCCAAACTTTCGGCCCAGTGGTTTGCTTCTTTCCTCGGCGGCAACCTTACTAAATCTTCCTCCATTCTAAATCAAAATGACTTCGATTCTCTGATGGATAATTAA

Coding sequence (CDS)

ATGGGCAAGGTGTATGATCCTATAGTGTATGGAGATTACCCTAAGGAAATACGAGAAATTTTAGGAAGCCAACTTCCAACTTTTTCAGAGTCGGAGAAAAATCTTATAAGAGGAAGCTTGGACTACATTTGTGTCAACCACTATACAACATTTTATACAAAAGATTGTATTCATTCTACCTGCTCTTACGGTGGAGATCATCCTATAAAAGGATTTCTTAACACTACGGGATATCGAGATGGTGTTTCCATTGGAGATCCAGATATTCTACACTACCAGACGATGACACTTGAGCGACGGCCCAAACTTTCGGCCCAGTGGTTTGCTTCTTTCCTCGGCGGCAACCTTACTAAATCTTCCTCCATTCTAAATCAAAATGACTTCGATTCTCTGATGGATAATTAA

Protein sequence

MGKVYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSYGGDHPIKGFLNTTGYRDGVSIGDPDILHYQTMTLERRPKLSAQWFASFLGGNLTKSSSILNQNDFDSLMDN

Homology

[Close]

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot
Match: Q9SVS1 (Beta-glucosidase 47 OS=Arabidopsis thaliana OX=3702 GN=BGLU47 PE=3 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-16
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSYG- 65
           DP+V+G YP+E+REILG  LP F++ +    + +LD+I +N YT+ Y KDC+HS C  G 
Sbjct: 321 DPVVFGRYPREMREILGDDLPEFTKDDLKSSKNALDFIGINQYTSRYAKDCLHSVCEPGK 380

Query: 66  GDHPIKGFLNTTGYRDGVSIGDP----DILHYQT 95
           G    +GF+     +DG+ +G+P    ++L Y T
Sbjct: 381 GGSRAEGFVYANALKDGLRLGEPVGMEEMLMYAT 414

[Close]

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot
Match: Q7XPY5 (Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU15 PE=5 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-16
Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSYGG 65
           DPI +G+YP+E+REIL S LP F+  EK L++  +D+I +N YT  Y KDCI+S C+   
Sbjct: 141 DPIFFGEYPREMREILSSNLPKFTPEEKKLLQNKVDFIGINQYTAIYAKDCIYSPCAL-N 200

Query: 66  DHPIKGFLNTTGYRDGVSIGDP 88
            +     + TTG R+G  IG P
Sbjct: 201 TYEGNALVYTTGVRNGAKIGKP 221

[Close]

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot
Match: Q7XSK0 (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-16
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSYGG 65
           DP+VYGDYP E+R+ILG +LP+FS  ++  +R  LD+I VNHYTT Y +DC+ S C  G 
Sbjct: 295 DPLVYGDYPPEMRQILGGRLPSFSPEDRRKLRYKLDFIGVNHYTTLYARDCMFSDCPQGQ 354

Query: 66  DHPIKGFLNTTGYRDGVSIGDP 88
           +         TG  +G+ IG P
Sbjct: 355 ETQ-HALAAVTGESNGLPIGTP 375

[Close]

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot
Match: Q7XSK2 (Beta-glucosidase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU16 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGS-LDYICVNHYTTFYTKDCIHSTC--- 65
           DPI +GDYP+E+REIL S LP F+  EK L++ + +D+I +NHYT  Y KDCI+S C   
Sbjct: 296 DPIFFGDYPREMREILSSNLPKFTPEEKKLLQNNKVDFIGINHYTAIYAKDCIYSPCTLD 355

Query: 66  SYGGDHPIKGFLNTTGYRDGVSIGDPDILH 92
           +Y G+      +   G R+G  IG P  LH
Sbjct: 356 TYEGN----ALVYAIGRRNGKIIGKPTALH 381

[Close]

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot
Match: Q84YK7 (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.0e-14
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 2   GKVYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTC 61
           G   DPIV+GDYP  +R+++G +LP F+  +  L++GS D+I +N+YTT Y K  +    
Sbjct: 289 GWFMDPIVFGDYPGTMRKLVGDRLPKFTAEQSELVKGSYDFIGLNYYTTNYAKSVLRRPS 348

Query: 62  SYGGDHPIKGFLNTTGYRDGVSIGDP 88
                +    ++N T YR+GV IG P
Sbjct: 349 KLKPAYATDNWVNQTAYRNGVPIGPP 374

[Close]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL
Match: A0A1S3BZ78 (beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103495056 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40
Identity = 101/232 (43.53%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE++EILGSQLP+FS+ EKN+IRGSLD++CVNHYTTFYTKDC+HS CS 
Sbjct: 267 VYDPIVYGDYPKEMQEILGSQLPSFSDIEKNIIRGSLDFVCVNHYTTFYTKDCLHSPCSD 326

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGDH I G+LNTT YRDGVSIGDP                                    
Sbjct: 327 GGDHAITGYLNTTAYRDGVSIGDPTGIDVFFVVPRGLGKVINYIKERYPNKPIFVTENGY 386

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 387 SMPQAEGNNVEDLIKDTKRVNYHKDYLASLAKAMRDGADVRGYFVWSLIDNFEWADGYDT 446

[Close]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL
Match: A0A0A0LD30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852490 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.1e-40
Identity = 100/232 (43.10%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+REILGSQLP+FS+ EK++IRGSLD+ICVNHYTTFYTKDC+HS C  
Sbjct: 314 VYDPIVYGDYPKEMREILGSQLPSFSDVEKDIIRGSLDFICVNHYTTFYTKDCLHSACFG 373

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GG+HP+ G+LNTT YRDGVSIGDP                                    
Sbjct: 374 GGNHPVTGYLNTTAYRDGVSIGDPTGIDVFFVVPRGLGKVINYIKERYPNKPIFVTENGY 433

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 434 SSPQSEGNETEVLIKDTKRVNYHKNYLASLANAMRDGADVRGYFVWSLIDNFEWADGYDT 493

[Close]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL
Match: K4GMG6 (Beta-glucosidase (Fragment) OS=Cucumis sativus OX=3659 GN=BG1 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 99/232 (42.67%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+REILGSQLP+FS+ EK++IRGSLD+ICVNHYTTFYTKDC+HS C  
Sbjct: 106 VYDPIVYGDYPKEMREILGSQLPSFSDVEKDIIRGSLDFICVNHYTTFYTKDCLHSACFG 165

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           G +HP+ G+LNTT YRDGVSIGDP                                    
Sbjct: 166 GRNHPVTGYLNTTAYRDGVSIGDPTGIDVFFVVPRGLGKVINYIKERYPNKPIFVTENGY 225

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 226 SSPQSEGNETEVLIKDTKRVNYHKNYLASLANAMRDGADVRGYFVWSLIDNFEWADGYDT 285

[Close]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL
Match: A0A0A0L4S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638400 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 96/227 (42.29%), Postives = 109/227 (48.02%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+RE+ GSQLP+FS +EKN+I+GSLDYICVNHYTT Y KDC+HS CS 
Sbjct: 295 VYDPIVYGDYPKEMREVFGSQLPSFSNTEKNIIKGSLDYICVNHYTTLYAKDCLHSPCSN 354

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGD PIKGFL+T GYR+ VSIGDP                                    
Sbjct: 355 GGDRPIKGFLDTMGYRNSVSIGDPTGMDRFFVVPRGLEKTINYINQRYPNKPIFVTENGY 414

Query: 124 ------------------------------------------------------------ 133
                                                                       
Sbjct: 415 STPPSDGNKVEDIINDTKRVNFHRNYLASLVRAMRNGADVRGYFVWSLMDNLEWIHGFNT 474

[Close]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL
Match: A0A1S3BVA7 (beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103493887 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.1e-37
Identity = 100/230 (43.48%), Postives = 115/230 (50.00%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+RE+ GSQLP+FS++EK++I+GSLDYICVNHYTT YTKDC+HS CS 
Sbjct: 312 VYDPIVYGDYPKEMREVFGSQLPSFSKTEKSIIKGSLDYICVNHYTTLYTKDCLHSPCSN 371

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGD PIKGFL+TTGYRD VSIGDP                                    
Sbjct: 372 GGDRPIKGFLDTTGYRDSVSIGDPTGVDRFFVVPRGLEKIINYIRQRYPNNPIVVTENGY 431

Query: 124 -----------DIL---------------------------------------------- 132
                      DI+                                              
Sbjct: 432 SMPPSDGKTLEDIINDTKRVNFHKNYLASLVRAMRNGADVRGYFVWSLMDNFEWIDGFTT 491

[Close]

BLAST of Lsi04G013130 vs. NCBI nr
Match: XP_038896554.1 (beta-glucosidase 18-like [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 109/232 (46.98%), Postives = 122/232 (52.59%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+REILGSQLP+FS+ EKN++RGSLDYICVNHYTTFYTKDC+HS CSY
Sbjct: 436 VYDPIVYGDYPKEMREILGSQLPSFSDLEKNILRGSLDYICVNHYTTFYTKDCLHSACSY 495

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGDHPI GFLNTTGYRDGV+IGDP                                    
Sbjct: 496 GGDHPITGFLNTTGYRDGVAIGDPTGIDIFFVVPRGLEKIINYIKRRYPKKPIFVTENGY 555

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 556 SMPPGDGNTVEDMINDTKRVNYHKNYLASLARAIRNGADVRGYFVWSLMDNFEWADGYAT 615

[Close]

BLAST of Lsi04G013130 vs. NCBI nr
Match: XP_038899222.1 (beta-glucosidase 18-like isoform X2 [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 103/206 (50.00%), Postives = 119/206 (57.77%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+RE+ G+QLP+FS+SEKN+IRGSLDYICVNHYTT YTKDC++S CS 
Sbjct: 299 VYDPIVYGDYPKEMREVFGNQLPSFSDSEKNIIRGSLDYICVNHYTTLYTKDCLYSACSN 358

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGD PIKGFL+T GYRDGVSIGDP                                    
Sbjct: 359 GGDRPIKGFLDTMGYRDGVSIGDPTGVDRFFVVPRGLEKIINYIKQRYPNIPIYVTENGY 418

Query: 124 ------------------------------------DILHYQTMTLERRPKLSAQWFASF 135
                                                +L+    TLERRPKLSAQWFASF
Sbjct: 419 SMPPGDGNKVEDIINDIKRVNFHKNYLASLARAMRFGLLYVDLQTLERRPKLSAQWFASF 478

[Close]

BLAST of Lsi04G013130 vs. NCBI nr
Match: XP_038899221.1 (beta-glucosidase 18-like isoform X1 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 103/232 (44.40%), Postives = 119/232 (51.29%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+RE+ G+QLP+FS+SEKN+IRGSLDYICVNHYTT YTKDC++S CS 
Sbjct: 299 VYDPIVYGDYPKEMREVFGNQLPSFSDSEKNIIRGSLDYICVNHYTTLYTKDCLYSACSN 358

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGD PIKGFL+T GYRDGVSIGDP                                    
Sbjct: 359 GGDRPIKGFLDTMGYRDGVSIGDPTGVDRFFVVPRGLEKIINYIKQRYPNIPIYVTENGY 418

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 419 SMPPGDGNKVEDIINDIKRVNFHKNYLASLARAMSNGADVRGYFVWSLMDNFEWADGYAT 478

[Close]

BLAST of Lsi04G013130 vs. NCBI nr
Match: XP_008454703.2 (PREDICTED: beta-glucosidase 18-like [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 4.8e-40
Identity = 101/232 (43.53%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE++EILGSQLP+FS+ EKN+IRGSLD++CVNHYTTFYTKDC+HS CS 
Sbjct: 267 VYDPIVYGDYPKEMQEILGSQLPSFSDIEKNIIRGSLDFVCVNHYTTFYTKDCLHSPCSD 326

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GGDH I G+LNTT YRDGVSIGDP                                    
Sbjct: 327 GGDHAITGYLNTTAYRDGVSIGDPTGIDVFFVVPRGLGKVINYIKERYPNKPIFVTENGY 386

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 387 SMPQAEGNNVEDLIKDTKRVNYHKDYLASLAKAMRDGADVRGYFVWSLIDNFEWADGYDT 446

[Close]

BLAST of Lsi04G013130 vs. NCBI nr
Match: XP_011652391.1 (beta-glucosidase 18 isoform X2 [Cucumis sativus] >KGN60041.2 hypothetical protein Csa_002103 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 100/232 (43.10%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSY 63
           VYDPIVYGDYPKE+REILGSQLP+FS+ EK++IRGSLD+ICVNHYTTFYTKDC+HS C  
Sbjct: 306 VYDPIVYGDYPKEMREILGSQLPSFSDVEKDIIRGSLDFICVNHYTTFYTKDCLHSACFG 365

Query: 64  GGDHPIKGFLNTTGYRDGVSIGDP------------------------------------ 123
           GG+HP+ G+LNTT YRDGVSIGDP                                    
Sbjct: 366 GGNHPVTGYLNTTAYRDGVSIGDPTGIDVFFVVPRGLGKVINYIKERYPNKPIFVTENGY 425

Query: 124 ------------------------------------------------------------ 135
                                                                       
Sbjct: 426 SSPQSEGNETEVLIKDTKRVNYHKNYLASLANAMRDGADVRGYFVWSLIDNFEWADGYDT 485

[Close]

BLAST of Lsi04G013130 vs. TAIR 10
Match: AT4G21760.1 (beta-glucosidase 47 )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCIHSTCSYG- 65
           DP+V+G YP+E+REILG  LP F++ +    + +LD+I +N YT+ Y KDC+HS C  G 
Sbjct: 321 DPVVFGRYPREMREILGDDLPEFTKDDLKSSKNALDFIGINQYTSRYAKDCLHSVCEPGK 380

Query: 66  GDHPIKGFLNTTGYRDGVSIGDP----DILHYQT 95
           G    +GF+     +DG+ +G+P    ++L Y T
Sbjct: 381 GGSRAEGFVYANALKDGLRLGEPVGMEEMLMYAT 414

[Close]

BLAST of Lsi04G013130 vs. TAIR 10
Match: AT1G61810.1 (beta-glucosidase 45 )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESE-KNLIRGSLDYICVNHYTTFYTKDCIHSTCS 63
           + DP++YG YPKE+ +ILG  LP FS +E KNL +   D++ +NHYT+++ +DC+ S C+
Sbjct: 299 ILDPVIYGKYPKEMVDILGPALPQFSSNEVKNLEKSRADFVGINHYTSYFIQDCLTSACN 358

Query: 64  YG-GDHPIKGFLNTTGYRDGVSIGDPDILHYQ 94
            G G    +G+      +  V+IG+   +++Q
Sbjct: 359 TGHGAFKAEGYALKLDRKGNVTIGELTDVNWQ 390

[Close]

BLAST of Lsi04G013130 vs. TAIR 10
Match: AT1G61810.3 (beta-glucosidase 45 )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = 0


Query: 4   VYDPIVYGDYPKEIREILGSQLPTFSESE-KNLIRGSLDYICVNHYTTFYTKDCIHSTCS 63
           + DP++YG YPKE+ +ILG  LP FS +E KNL +   D++ +NHYT+++ +DC+ S C+
Sbjct: 299 ILDPVIYGKYPKEMVDILGPALPQFSSNEVKNLEKSRADFVGINHYTSYFIQDCLTSACN 358

Query: 64  YG-GDHPIKGFLNTTGYRDGVSIGDPDILHYQ 94
            G G    +G+      +  V+IG+   +++Q
Sbjct: 359 TGHGAFKAEGYALKLDRKGNVTIGELTDVNWQ 390

[Close]

BLAST of Lsi04G013130 vs. TAIR 10
Match: AT2G44480.1 (beta glucosidase 17 )

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 33/85 (38.82%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCI---HSTCS 65
           DPI YGDYPK +RE++G++LP F++ +  ++RGS D+  +N+YT+ Y +D +   ++  S
Sbjct: 304 DPITYGDYPKTMRELVGNRLPKFTKKQSKMVRGSFDFFGLNYYTSRYVEDVMFYANTNLS 363

Query: 66  YGGDHPIKGFLNTTGYRDGVSIGDP 88
           Y  D  +    N T  ++GV +G+P
Sbjct: 364 YTTDSRV----NQTTEKNGVPVGEP 384

[Close]

BLAST of Lsi04G013130 vs. TAIR 10
Match: AT2G44480.2 (beta glucosidase 17 )

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 33/85 (38.82%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 6   DPIVYGDYPKEIREILGSQLPTFSESEKNLIRGSLDYICVNHYTTFYTKDCI---HSTCS 65
           DPI YGDYPK +RE++G++LP F++ +  ++RGS D+  +N+YT+ Y +D +   ++  S
Sbjct: 202 DPITYGDYPKTMRELVGNRLPKFTKKQSKMVRGSFDFFGLNYYTSRYVEDVMFYANTNLS 261

Query: 66  YGGDHPIKGFLNTTGYRDGVSIGDP 88
           Y  D  +    N T  ++GV +G+P
Sbjct: 262 YTTDSRV----NQTTEKNGVPVGEP 282

The following BLAST results are available for this feature:

BLAST of Lsi04G013130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVS1	2.2e-16	41.49	Beta-glucosidase 47 OS=Arabidopsis thaliana OX=3702 GN=BGLU47 PE=3 SV=2	[more]
Q7XPY5	3.8e-16	46.34	Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU15 ...	[more]
Q7XSK0	3.8e-16	47.56	Beta-glucosidase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU18 PE=1 SV=2	[more]
Q7XSK2	1.5e-15	46.67	Beta-glucosidase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU16 PE=1 SV=2	[more]
Q84YK7	8.0e-14	39.53	Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1	[more]

BLAST of Lsi04G013130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZ78	2.3e-40	43.53	beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103495056 PE=3 SV=1	[more]
A0A0A0LD30	5.1e-40	43.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852490 PE=3 SV=1	[more]
K4GMG6	4.4e-39	42.67	Beta-glucosidase (Fragment) OS=Cucumis sativus OX=3659 GN=BG1 PE=2 SV=1	[more]
A0A0A0L4S1	1.3e-38	42.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G638400 PE=3 SV=1	[more]
A0A1S3BVA7	3.1e-37	43.48	beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103493887 PE=3 SV=1	[more]

BLAST of Lsi04G013130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896554.1	1.7e-45	46.98	beta-glucosidase 18-like [Benincasa hispida]	[more]
XP_038899222.1	1.1e-44	50.00	beta-glucosidase 18-like isoform X2 [Benincasa hispida]	[more]
XP_038899221.1	1.1e-41	44.40	beta-glucosidase 18-like isoform X1 [Benincasa hispida]	[more]
XP_008454703.2	4.8e-40	43.53	PREDICTED: beta-glucosidase 18-like [Cucumis melo]	[more]
XP_011652391.1	1.1e-39	43.10	beta-glucosidase 18 isoform X2 [Cucumis sativus] >KGN60041.2 hypothetical protei...	[more]

BLAST of Lsi04G013130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21760.1	1.6e-17	41.49	beta-glucosidase 47	[more]
AT1G61810.1	1.3e-14	38.04	beta-glucosidase 45	[more]
AT1G61810.3	1.3e-14	38.04	beta-glucosidase 45	[more]
AT2G44480.1	1.4e-13	38.82	beta glucosidase 17	[more]
AT2G44480.2	1.4e-13	38.82	beta glucosidase 17	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..92 e-value: 5.4E-17 score: 63.3
None	No IPR available	PANTHER	PTHR10353:SF175	BETA-GLUCOSIDASE 18-LIKE	coord: 2..88
IPR001360	Glycoside hydrolase family 1	PFAM	PF00232	Glyco_hydro_1	coord: 5..57 e-value: 5.6E-8 score: 31.6
IPR001360	Glycoside hydrolase family 1	PANTHER	PTHR10353	GLYCOSYL HYDROLASE	coord: 2..88
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G013130.1	Lsi04G013130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds