Lsi04G013060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G013060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Beta-glucosidase
Location	chr04: 20751540 .. 20754699 (+)
RNA-Seq Expression	Lsi04G013060
Synteny	Lsi04G013060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTCTTTCTCCTCTACCTCTATTTTTATTTTTGTTTAAAATTTATTGAAGATCTTATGCCTTAACTAATTGAATTTTATCATTTACAAGTTGGCATGTTAAAATCAAAGTTAAGAACTAATAAAGAAATTTAAAAGGCCGTTTTCAATTATATTATTGATTAGACATACACATATACAACTAATACTTTATGACCTAAAGGGCGATAACATTAACTATTATTGTACAAGACTCTTTAAATAAAAATAAAGGCCAAGAACAAGCTCAAAATAGTTTAAATAAGAGAGGAAATAGTTCTTAAAAAATTGCATAAACAAATTACTGGGAAATTGTGAATTATTTGAAAAACTCAACTTCTAATCTTTTTTTATATTAAAAATGATAAAAGTGATAATTACAATTTTAAAATAATAAACTTCAAGAAATTAAATAAGTGTAGGTCTTCTATATTAACCTATGAGTATGTATGTGTTGAATTATTTTCATAATATTATTCGTAGTATATGACAAGTGATTTTGAGTTATTTAACGGATAATATCAAGTAATTTTGAAGATGGATTCATGACTTCTCATACAGAGACATGTCATGTTAGGCAGAAAACAACTCATTGGTCATGAGAATTATGGAAAAGAACTCTATGGTCAATATATATAAATATAAGACTATGGTCTCCAAAACACTATGTCTCGTTAGCATCCTATTTCCCATCTGAAGTTCTACTCAATCCGGTCTGATTTGTCTATCCATAGTTCCAAGTAACTTTAACATCTTTATAGATTTTAATTTTCTTCCATGCTTAGATCTTTTATCTCGATTGTTCTCTATGGTCATTGTAGAATAATCATGAGCTTGGATTTTATTATTTCTCAACATATGTATATCCTAAAGTTACCTTTTTATATGGTAGACTGGAGTAGCAACATTCTCTGTTGTTTCAAGAGGCTTGGAAGAAATCATTAACTATGCTAAAGAAAGGTATCCCAACAAGCCCATCTTTATCACAGAAAATGGTAAGTTAACACAAAAATATGATTGTATTTGTAATTACATTAGTGTGCCACGTCAAATTAAACTGTTCGGACTTGTTTATGAAACTATCGTATAAATAATTATTATGTTTGTATGTGAAAAATACTTGTTTTCAACGTTTTCTCAAGTACGACCGTTTTCTAAAACAGTTTTTTAAGTACTTTTTAAATTTATAACTAAATATTAGGAAAAATTTGAAATTTTATTTTAATTAATATAGCTATTTTTAAGATCTTGAAAAGTGCTTTCTTTTACTTTTCAGGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGTAAATAAATAGCCCCTTTATTACCTTTTCTATGTATTATCTCTTTTTCATTTTTAATCCAAGGTTTTAGGTATCCTTTATTTTAGAAAAATTATTTTCAACAATTTTGAGTGATTATCCCATATCTTTATTGGGAGAAGTTTATAGGCACTTTTTAGACCTAACTCAAGTATTTGACTTATAAATTTTTTTCAATCCAAACAACACTATTATTAAATAATGATTTCAACTTTTGAAGCATTTAAATTAGGTTGGTTTGAGTTGTTTTGATCATTTATTCAAATTTTTATTTTAAGAAAAATTAAAATATTAATATGTAAAACATCTTTTTAATTATTTTTTAGGGAAATTGTTGTGTATAGAAAAAAACAAAAGTAATTACACATATAGAAAAAAGTGCACTCCATGCTTTTGTATTTCTCACTTTTTTTTTCTATATGTGTAATTACTTTTATTTTTTTCCTATTTATGAAAAGCCTATTTTTTAATACTGAAATCAAACTATCAATACAATTACAATGTATATGATGAAAAGTAACCTTTCAAATAATTAAAAAAATATATTTAGTAGTTATCGGATAGTAAATAATAAAAAAATCATGAAATTAAATAACTTTGTAATAAGTATATGTATATGTATAATTGCTTGGAATGTAAAACAAATACTCTTTAAAATAAATAATAAGTTTGTCTTGCTTCCTAAATTTTCATTTATTTGAAGTCAATCAAATCCAACCTAAACTGTACGGATTGAGCTGGGTTGATTAGATTTTTCTAATCATCAATCTTTTTTAACACTTCTAATTTTCGCTTATAGTCGTTATTGTTTGGCCAACCAACTTAAACACATGTCCATAATGATACGATATTATCCATGTTGAATAATCTTAATCCATGCGATACTTAGGGCTTATTTCAATTGACTTTTTAAATGTGTACAAGTGCAAAAAAAAAAAAAATGTTTATAAACACTTAGAAAGTCAATCCAAACAAGTTCTTAGTCTCCATTTTCTAAAAAAGAGCTCATATATCTCAAATCTTTCCTATATTAAATAATGTAATTAATGTTTGATGTAATATCTATACCTTATGTAAGAATTAATAATAATAACAACATTTTTATGATAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAAGAATGCCAAATGCTTTTGGAAAAACTACTTTTATTCATGCTCGTGATTGAATCAATTTCATTAATGAGAAGAAATCATGTTCTAAAGTCCTTGTTGCTAAGAAAAATAATGACGGATGATCAACTTGATTAAATTTACTTATTATTTGTTTCCTTTTCTCTTTTTAGTGTATGGTGTTACTAAAAGAAATGTTATTCCTGGTCGAGGATTAAGAAACTCATTTATTTCTC

mRNA sequence

ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAAGAATGCCAAATGCTTTTGGAAAAACTACTTTTATTCATGCTCGTGATTGAATCAATTTCATTAATGAGAAGAAATCATGTTCTAAAGTCCTTGTTGCTAAGAAAAATAATGACGGATGATCAACTTGATTAAATTTACTTATTATTTGTTTCCTTTTCTCTTTTTAGTGTATGGTGTTACTAAAAGAAATGTTATTCCTGGTCGAGGATTAAGAAACTCATTTATTTCTC

Coding sequence (CDS)

ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAA

Protein sequence

MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASLAKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNLQQLAKSSSLLNTNASQSLMDA

Homology

[Close]

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot
Match: Q9SVS1 (Beta-glucosidase 47 OS=Arabidopsis thaliana OX=3702 GN=BGLU47 PE=3 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-27
Identity = 59/160 (36.88%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 3   RGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI----------- 62
           + +LD+IGIN Y++ Y KDCLHS C         +GF+   + +D + +           
Sbjct: 352 KNALDFIGINQYTSRYAKDCLHSVCEPGKGGSRAEGFVYANALKDGLRLGEPVGMEEMLM 411

Query: 63  ------RDLVRYSPSNG-DSDKVEDILNDTKRINYHKNYLASLAKATRNGGDVRGYFVWS 122
                 +++  Y   NG   +    +LND +R+ +  NYL +L +A R G DVRGYF WS
Sbjct: 412 YATERYKNITLYVTENGFGENNTGVLLNDYQRVKFMSNYLDALKRAMRKGADVRGYFAWS 471

Query: 123 LMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           L+DNFEW +GYT  +G+++VD  T +R P+LSA W+ + +
Sbjct: 472 LLDNFEWISGYTIRFGMYHVDFSTQERTPRLSASWYKNFI 511

[Close]

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot
Match: Q7XPY7 (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.1e-26
Identity = 69/176 (39.20%), Postives = 90/176 (51.14%), Query Frame = 0


Query: 6   LDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI---------RDLVR 65
           LD+IG+NHY+T Y KDC+ S C  +      + F  +   RD + I          D+ R
Sbjct: 326 LDFIGLNHYTTCYVKDCIFSPCEIDPVNADARVF--SLYERDGVPIGKATGAPFFHDVPR 385

Query: 66  ------------------------YSPSNGDSDKVEDILNDTKRINYHKNYLASLAKATR 125
                                   YS ++  +   +D  NDT RI Y + YL SLA A R
Sbjct: 386 GMEEAVTYYKQRYNNTPTYITENGYSQASNSNMTAKDFTNDTGRITYIQGYLISLASAIR 445

Query: 126 NGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
            G DVRGYFVWSL+D+FEW  GYT  +GL++V   TLKR PKLS  W+   L G+L
Sbjct: 446 KGADVRGYFVWSLLDDFEWNFGYTLRFGLYHVHYKTLKRTPKLSVDWYRKFLTGSL 499

[Close]

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot
Match: Q7XPY5 (Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU15 PE=5 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25
Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNC-------------------------SSEASYHP 60
           +++  +D+IGIN Y+ +Y KDC++S C                         ++ ++Y  
Sbjct: 170 LLQNKVDFIGINQYTAIYAKDCIYSPCALNTYEGNALVYTTGVRNGAKIGKPTAFSTYFV 229

Query: 61  IQGFLETTSSRDDISIRDLVRYSPSNGDSD----KVEDILNDTKRINYHKNYLASLAKAT 120
           +   +E+     +   +D   Y   NG S      +ED++ND +R+NY + YL  L+ A 
Sbjct: 230 VPESIESAVMYVNGRYKDTTIYITENGYSQHSDTNMEDLINDVERVNYLQGYLKYLSSAV 289

Query: 121 RNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 148
           R G +V GYF+WSL+DNFEW  GYT  +GL++VD  T +R PK+SA+W+   L G+
Sbjct: 290 RKGANVGGYFMWSLIDNFEWVFGYTIKFGLYHVDFDTQERIPKMSAKWYRDFLTGS 345

[Close]

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot
Match: Q7XSK0 (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 4.4e-25
Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 2   IRGSLDYIGINHYSTLYTKDCLHSNC-SSEASYHPIQGF--------LETTSSRDDI--- 61
           +R  LD+IG+NHY+TLY +DC+ S+C   + + H +           + T ++       
Sbjct: 325 LRYKLDFIGVNHYTTLYARDCMFSDCPQGQETQHALAAVTGESNGLPIGTPTAMPTFYVV 384

Query: 62  --SIRDLVRY----------------SPSNGDS-DKVEDILNDTKRINYHKNYLASLAKA 121
              I  +V+Y                    GDS    ED ++D  RI Y + YL  LAK 
Sbjct: 385 PDGIEKMVKYFMRRYNNLPMFITENGYAQGGDSYTDAEDWIDDEDRIEYLEGYLTKLAKV 444

Query: 122 TRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
            R+G DVRGYF WS++DNFEW  GYT  +GL+Y+D  T +R PKLSA W+   L
Sbjct: 445 IRDGADVRGYFAWSVVDNFEWLFGYTLRFGLYYIDYRTQERSPKLSALWYKEFL 498

[Close]

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot
Match: O80689 (Beta-glucosidase 45 OS=Arabidopsis thaliana OX=3702 GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-24
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL S C++       +G+      + +++I +L            
Sbjct: 337 DFVGINHYTSYFIQDCLTSACNTGHGAFKAEGYALKLDRKGNVTIGELTDVNWQHIDPTG 396

Query: 67  ----------RY--------SPSNGDSDKVE----DILNDTKRINYHKNYLASLAKATRN 126
                     RY            GD  K E    ++LNDTKRI Y   YL +L  A R+
Sbjct: 397 FHKMLNYLKDRYPNMPMFITENGFGDLQKPETTDKELLNDTKRIQYMSGYLEALQAAMRD 456

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           G +V+GYFVWSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +
Sbjct: 457 GANVKGYFVWSLLDNFEWLFGYKVRFGLFHVDLTTLKRSPKQSASWYKNYI 507

[Close]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL
Match: A0A6J1FBJ3 (beta-glucosidase 18-like OS=Cucurbita moschata OX=3662 GN=LOC111442578 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.1e-54
Identity = 116/200 (58.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +++GSLDYI +NHY+TLYTKDCLHS CS +A+  PI+GFL+TT  RD +SI D       
Sbjct: 334 VLKGSLDYIYVNHYTTLYTKDCLHSICSDDAN-RPIKGFLDTTGYRDGVSIGDPTGVDRF 393

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS  + D + VED++NDTKR+NYHK YLASL
Sbjct: 394 FVVPRGLEKIINYIKERYPDKPIYVTENGYSAPSSDGNNVEDMVNDTKRVNYHKKYLASL 453

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 168
           AKA RNG DVRGYF WSLMDNFEWA+GY   +GL YVDR TL+RRPKLSAQWFAS LGG+
Sbjct: 454 AKAMRNGADVRGYFAWSLMDNFEWADGYGTRFGLLYVDRQTLERRPKLSAQWFASFLGGH 513

[Close]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL
Match: A0A6J1IH03 (beta-glucosidase 18-like OS=Cucurbita maxima OX=3661 GN=LOC111476863 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.0e-54
Identity = 115/201 (57.21%), Postives = 137/201 (68.16%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +++GSLDYI +NHY+TL+TKDCLHS CS +A+  PI+GFL+TT  RD +SI D       
Sbjct: 334 ILKGSLDYIYVNHYTTLFTKDCLHSICSDDAN-RPIKGFLDTTGYRDGVSIGDPTGVDRF 393

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS  + DS+ VED++NDTKR+NYHK YLASL
Sbjct: 394 FVVPRGLEKIINYIKERYPDKPIFVTENGYSAPSTDSNNVEDMVNDTKRVNYHKKYLASL 453

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           AKA RNG DVRGYF WSLMDNFEWA+GY   +GL YVDR TL+RRPKLSAQWFAS LGG+
Sbjct: 454 AKAMRNGADVRGYFAWSLMDNFEWADGYGTRFGLLYVDRQTLERRPKLSAQWFASFLGGH 513

[Close]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL
Match: A0A1S3BVA7 (beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103493887 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 4.5e-49
Identity = 106/192 (55.21%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRD------- 60
           +I+GSLDYI +NHY+TLYTKDCLHS CS+     PI+GFL+TT  RD +SI D       
Sbjct: 343 IIKGSLDYICVNHYTTLYTKDCLHSPCSNGGD-RPIKGFLDTTGYRDSVSIGDPTGVDRF 402

Query: 61  ------------LVR--------------YSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                        +R              YS    D   +EDI+NDTKR+N+HKNYLASL
Sbjct: 403 FVVPRGLEKIINYIRQRYPNNPIVVTENGYSMPPSDGKTLEDIINDTKRVNFHKNYLASL 462

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 160
            +A RNG DVRGYFVWSLMDNFEW +G+T  +GL+YVD  TL+RRPKLSA WFAS LGGN
Sbjct: 463 VRAMRNGADVRGYFVWSLMDNFEWIDGFTTRFGLWYVDFQTLERRPKLSAHWFASFLGGN 522

[Close]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL
Match: A0A1S3BZ78 (beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103495056 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.9e-49
Identity = 105/201 (52.24%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +IRGSLD++ +NHY+T YTKDCLHS C S+   H I G+L TT+ RD +SI D       
Sbjct: 298 IIRGSLDFVCVNHYTTFYTKDCLHSPC-SDGGDHAITGYLNTTAYRDGVSIGDPTGIDVF 357

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS    + + VED++ DTKR+NYHK+YLASL
Sbjct: 358 FVVPRGLGKVINYIKERYPNKPIFVTENGYSMPQAEGNNVEDLIKDTKRVNYHKDYLASL 417

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           AKA R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 418 AKAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 477

[Close]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL
Match: A0A0A0LD30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852490 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 6.5e-48
Identity = 103/201 (51.24%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +IRGSLD+I +NHY+T YTKDCLHS C    + HP+ G+L TT+ RD +SI D       
Sbjct: 345 IIRGSLDFICVNHYTTFYTKDCLHSACFGGGN-HPVTGYLNTTAYRDGVSIGDPTGIDVF 404

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS    + ++ E ++ DTKR+NYHKNYLASL
Sbjct: 405 FVVPRGLGKVINYIKERYPNKPIFVTENGYSSPQSEGNETEVLIKDTKRVNYHKNYLASL 464

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A A R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 465 ANAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 524

[Close]

BLAST of Lsi04G013060 vs. NCBI nr
Match: XP_038891449.1 (probable inactive beta-glucosidase 14 isoform X1 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 142/200 (71.00%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 2   IRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIR--------- 61
           I+ SLDYIGINHY+TLYTKDCLHS CS E SYHPIQGFLETT  RDDISIR         
Sbjct: 330 IKESLDYIGINHYATLYTKDCLHSTCSFEGSYHPIQGFLETTWYRDDISIRETSEAAFVV 389

Query: 62  ------DLVRY-----------------SPSNGDSDKVEDILNDTKRINYHKNYLASLAK 121
                 +++ Y                 SP  G+ +KVEDILNDTKRI YHKNYLASLAK
Sbjct: 390 VPRGLEEIINYAKERYPNKPIFITENGCSPPLGNGNKVEDILNDTKRIYYHKNYLASLAK 449

Query: 122 ATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNLQ 170
           A RNGGDVRGYFVWSLMDNFEWANGYT  YGL YVDRHTLKRRPKLSAQWFAS LGGNLQ
Sbjct: 450 ALRNGGDVRGYFVWSLMDNFEWANGYTTRYGLLYVDRHTLKRRPKLSAQWFASFLGGNLQ 509

[Close]

BLAST of Lsi04G013060 vs. NCBI nr
Match: XP_038891450.1 (probable inactive beta-glucosidase 14 isoform X2 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 142/200 (71.00%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 2   IRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIR--------- 61
           I+ SLDYIGINHY+TLYTKDCLHS CS E SYHPIQGFLETT  RDDISIR         
Sbjct: 305 IKESLDYIGINHYATLYTKDCLHSTCSFEGSYHPIQGFLETTWYRDDISIRETSEAAFVV 364

Query: 62  ------DLVRY-----------------SPSNGDSDKVEDILNDTKRINYHKNYLASLAK 121
                 +++ Y                 SP  G+ +KVEDILNDTKRI YHKNYLASLAK
Sbjct: 365 VPRGLEEIINYAKERYPNKPIFITENGCSPPLGNGNKVEDILNDTKRIYYHKNYLASLAK 424

Query: 122 ATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNLQ 170
           A RNGGDVRGYFVWSLMDNFEWANGYT  YGL YVDRHTLKRRPKLSAQWFAS LGGNLQ
Sbjct: 425 ALRNGGDVRGYFVWSLMDNFEWANGYTTRYGLLYVDRHTLKRRPKLSAQWFASFLGGNLQ 484

[Close]

BLAST of Lsi04G013060 vs. NCBI nr
Match: XP_038891451.1 (beta-glucosidase 18-like isoform X3 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 142/200 (71.00%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 2   IRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIR--------- 61
           I+ SLDYIGINHY+TLYTKDCLHS CS E SYHPIQGFLETT  RDDISIR         
Sbjct: 258 IKESLDYIGINHYATLYTKDCLHSTCSFEGSYHPIQGFLETTWYRDDISIRETSEAAFVV 317

Query: 62  ------DLVRY-----------------SPSNGDSDKVEDILNDTKRINYHKNYLASLAK 121
                 +++ Y                 SP  G+ +KVEDILNDTKRI YHKNYLASLAK
Sbjct: 318 VPRGLEEIINYAKERYPNKPIFITENGCSPPLGNGNKVEDILNDTKRIYYHKNYLASLAK 377

Query: 122 ATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNLQ 170
           A RNGGDVRGYFVWSLMDNFEWANGYT  YGL YVDRHTLKRRPKLSAQWFAS LGGNLQ
Sbjct: 378 ALRNGGDVRGYFVWSLMDNFEWANGYTTRYGLLYVDRHTLKRRPKLSAQWFASFLGGNLQ 437

[Close]

BLAST of Lsi04G013060 vs. NCBI nr
Match: XP_038898507.1 (beta-glucosidase 18-like [Benincasa hispida])

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 128/202 (63.37%), Postives = 141/202 (69.80%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +IRGSLDYIGINHY+T YTKDCLHS C S+ SY PI+GF ETT+ RD +SI D       
Sbjct: 332 IIRGSLDYIGINHYTTFYTKDCLHSTC-SQGSYRPIKGFFETTAYRDGVSIGDPTGEARF 391

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YSP  GD +KVEDILNDTKR+NYHKNYL SL
Sbjct: 392 FVVPRGLEEIINYIKERYPNKSIFITENGYSPPQGDGNKVEDILNDTKRVNYHKNYLTSL 451

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 170
           AKA RNGGDVRGYFVWSLMDNFEW +GYT  +GL YVD HTL+RRPKLSAQWF S LGGN
Sbjct: 452 AKAMRNGGDVRGYFVWSLMDNFEWIDGYTTRFGLLYVDLHTLERRPKLSAQWFRSFLGGN 511

[Close]

BLAST of Lsi04G013060 vs. NCBI nr
Match: XP_038896554.1 (beta-glucosidase 18-like [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-55
Identity = 117/201 (58.21%), Postives = 134/201 (66.67%), Query Frame = 0


Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           ++RGSLDYI +NHY+T YTKDCLHS CS     HPI GFL TT  RD ++I D       
Sbjct: 467 ILRGSLDYICVNHYTTFYTKDCLHSACSYGGD-HPITGFLNTTGYRDGVAIGDPTGIDIF 526

Query: 61  ----------------------------RYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS   GD + VED++NDTKR+NYHKNYLASL
Sbjct: 527 FVVPRGLEKIINYIKRRYPKKPIFVTENGYSMPPGDGNTVEDMINDTKRVNYHKNYLASL 586

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A+A RNG DVRGYFVWSLMDNFEWA+GY   +GL YVD HTL+RRPKLSAQWFAS LGGN
Sbjct: 587 ARAIRNGADVRGYFVWSLMDNFEWADGYATRFGLLYVDLHTLERRPKLSAQWFASFLGGN 646

[Close]

BLAST of Lsi04G013060 vs. TAIR 10
Match: AT4G21760.1 (beta-glucosidase 47 )

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 59/160 (36.88%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 3   RGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI----------- 62
           + +LD+IGIN Y++ Y KDCLHS C         +GF+   + +D + +           
Sbjct: 352 KNALDFIGINQYTSRYAKDCLHSVCEPGKGGSRAEGFVYANALKDGLRLGEPVGMEEMLM 411

Query: 63  ------RDLVRYSPSNG-DSDKVEDILNDTKRINYHKNYLASLAKATRNGGDVRGYFVWS 122
                 +++  Y   NG   +    +LND +R+ +  NYL +L +A R G DVRGYF WS
Sbjct: 412 YATERYKNITLYVTENGFGENNTGVLLNDYQRVKFMSNYLDALKRAMRKGADVRGYFAWS 471

Query: 123 LMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           L+DNFEW +GYT  +G+++VD  T +R P+LSA W+ + +
Sbjct: 472 LLDNFEWISGYTIRFGMYHVDFSTQERTPRLSASWYKNFI 511

[Close]

BLAST of Lsi04G013060 vs. TAIR 10
Match: AT1G61810.1 (beta-glucosidase 45 )

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL S C++       +G+      + +++I +L            
Sbjct: 337 DFVGINHYTSYFIQDCLTSACNTGHGAFKAEGYALKLDRKGNVTIGELTDVNWQHIDPTG 396

Query: 67  ----------RY--------SPSNGDSDKVE----DILNDTKRINYHKNYLASLAKATRN 126
                     RY            GD  K E    ++LNDTKRI Y   YL +L  A R+
Sbjct: 397 FHKMLNYLKDRYPNMPMFITENGFGDLQKPETTDKELLNDTKRIQYMSGYLEALQAAMRD 456

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           G +V+GYFVWSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +
Sbjct: 457 GANVKGYFVWSLLDNFEWLFGYKVRFGLFHVDLTTLKRSPKQSASWYKNYI 507

[Close]

BLAST of Lsi04G013060 vs. TAIR 10
Match: AT1G61820.1 (beta glucosidase 46 )

HSP 1 Score: 111.3 bits (277), Expect = 7.6e-25
Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL + C+S       +G       + ++SI +L            
Sbjct: 334 DFLGINHYTSYFIQDCLITACNSGDGASKSEGLALKLDRKGNVSIGELTDVNWQHIDPNG 393

Query: 67  ----------------RYSPSNG------DSDKVEDILNDTKRINYHKNYLASLAKATRN 126
                            Y   NG          VE++L+DTKRI Y   YL +L  A R+
Sbjct: 394 FRKMLNYLKNRYHNIPMYITENGFGQLQKPETTVEELLHDTKRIQYLSGYLDALKAAMRD 453

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
           G +V+GYF WSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +  N+
Sbjct: 454 GANVKGYFAWSLLDNFEWLYGYKVRFGLFHVDFTTLKRTPKQSATWYKNFIEQNV 508

[Close]

BLAST of Lsi04G013060 vs. TAIR 10
Match: AT1G61820.3 (beta glucosidase 46 )

HSP 1 Score: 111.3 bits (277), Expect = 7.6e-25
Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL + C+S       +G       + ++SI +L            
Sbjct: 195 DFLGINHYTSYFIQDCLITACNSGDGASKSEGLALKLDRKGNVSIGELTDVNWQHIDPNG 254

Query: 67  ----------------RYSPSNG------DSDKVEDILNDTKRINYHKNYLASLAKATRN 126
                            Y   NG          VE++L+DTKRI Y   YL +L  A R+
Sbjct: 255 FRKMLNYLKNRYHNIPMYITENGFGQLQKPETTVEELLHDTKRIQYLSGYLDALKAAMRD 314

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
           G +V+GYF WSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +  N+
Sbjct: 315 GANVKGYFAWSLLDNFEWLYGYKVRFGLFHVDFTTLKRTPKQSATWYKNFIEQNV 369

[Close]

BLAST of Lsi04G013060 vs. TAIR 10
Match: AT5G54570.1 (beta glucosidase 41 )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 0


Query: 2   IRGSLDYIGINHYSTLYTKD-------CLHSNCSSEASYHPIQGFLETTSSRDDISI--- 61
           I+G+ DY+GINHY+TLY ++        +  + SS+++       + T+S R  ++I   
Sbjct: 328 IKGAFDYVGINHYTTLYARNDRTRIRKLILQDASSDSA-------VITSSFRGGVAIGER 387

Query: 62  --------------------RDLVRYSP----SNGDSDK------VEDILNDTKRINYHK 121
                               +D+    P     NG  +K      +E  L D KRI +H+
Sbjct: 388 AGSSWLHIVPWGIRKLAVYVKDIYGNPPVFITENGMDEKNSPFIDMEKALKDDKRIGFHR 447

Query: 122 NYLASLAKATRNGG-DVRGYFVWSLMDNFEWANGYTKGYGLFYVD-RHTLKRRPKLSAQW 165
           +YL++L+ A RN   DVRGYFVWSL+DN+EW +GYT  +G++YVD ++ L R PK SA+W
Sbjct: 448 DYLSNLSAAIRNDECDVRGYFVWSLLDNWEWNSGYTVRFGIYYVDYKNNLTRIPKASARW 507

The following BLAST results are available for this feature:

BLAST of Lsi04G013060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVS1	4.6e-27	36.88	Beta-glucosidase 47 OS=Arabidopsis thaliana OX=3702 GN=BGLU47 PE=3 SV=2	[more]
Q7XPY7	5.1e-26	39.20	Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q7XPY5	2.0e-25	34.09	Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU15 ...	[more]
Q7XSK0	4.4e-25	37.36	Beta-glucosidase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU18 PE=1 SV=2	[more]
O80689	2.8e-24	36.84	Beta-glucosidase 45 OS=Arabidopsis thaliana OX=3702 GN=BGLU45 PE=1 SV=1	[more]

BLAST of Lsi04G013060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBJ3	2.1e-54	58.00	beta-glucosidase 18-like OS=Cucurbita moschata OX=3662 GN=LOC111442578 PE=3 SV=1	[more]
A0A6J1IH03	6.0e-54	57.21	beta-glucosidase 18-like OS=Cucurbita maxima OX=3661 GN=LOC111476863 PE=3 SV=1	[more]
A0A1S3BVA7	4.5e-49	55.21	beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103493887 PE=3 SV=1	[more]
A0A1S3BZ78	5.9e-49	52.24	beta-glucosidase 18-like OS=Cucumis melo OX=3656 GN=LOC103495056 PE=3 SV=1	[more]
A0A0A0LD30	6.5e-48	51.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852490 PE=3 SV=1	[more]

BLAST of Lsi04G013060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891449.1	1.1e-68	71.00	probable inactive beta-glucosidase 14 isoform X1 [Benincasa hispida]	[more]
XP_038891450.1	1.1e-68	71.00	probable inactive beta-glucosidase 14 isoform X2 [Benincasa hispida]	[more]
XP_038891451.1	1.1e-68	71.00	beta-glucosidase 18-like isoform X3 [Benincasa hispida]	[more]
XP_038898507.1	1.8e-60	63.37	beta-glucosidase 18-like [Benincasa hispida]	[more]
XP_038896554.1	3.0e-55	58.21	beta-glucosidase 18-like [Benincasa hispida]	[more]

BLAST of Lsi04G013060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21760.1	3.3e-28	36.88	beta-glucosidase 47	[more]
AT1G61810.1	2.0e-25	36.84	beta-glucosidase 45	[more]
AT1G61820.1	7.6e-25	35.43	beta glucosidase 46	[more]
AT1G61820.3	7.6e-25	35.43	beta glucosidase 46	[more]
AT5G54570.1	1.9e-23	34.15	beta glucosidase 41	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001360	Glycoside hydrolase family 1	PRINTS	PR00131	GLHYDRLASE1	coord: 5..19 score: 37.24 coord: 94..111 score: 62.44 coord: 118..130 score: 39.9 coord: 73..84 score: 41.0
IPR001360	Glycoside hydrolase family 1	PFAM	PF00232	Glyco_hydro_1	coord: 64..144 e-value: 1.0E-28 score: 100.0
IPR001360	Glycoside hydrolase family 1	PANTHER	PTHR10353	GLYCOSYL HYDROLASE	coord: 64..151
IPR001360	Glycoside hydrolase family 1	PANTHER	PTHR10353	GLYCOSYL HYDROLASE	coord: 2..55
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..154 e-value: 2.6E-39 score: 136.8
None	No IPR available	PANTHER	PTHR10353:SF175	BETA-GLUCOSIDASE 18-LIKE	coord: 64..151
None	No IPR available	PANTHER	PTHR10353:SF175	BETA-GLUCOSIDASE 18-LIKE	coord: 2..55
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 2..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G013060.1	Lsi04G013060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds