Lsi04G012740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G012740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr04: 20100634 .. 20101543 (-)
RNA-Seq Expression	Lsi04G012740
Synteny	Lsi04G012740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCTGGTGGCCCTGTCAGAACGGTGCGATGTAAGGACTCTTCTTCAGACGAGCATCTTTTTCCATCCATCACGGTGGAGGAACATGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGATCACCATAAAAAGAAAGGCGGTGCCGGTTCTTTGTCACGGGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGTTTGTCCGCCGATCTAAAACATCTTTTGAAATCGTAGCAATTTCGTTCTCTGTTTTTCTTTTTCTGCGATTGATCTACTTCGATTATTCGATTGATGTTCTTTGAGTGTTGCAGGCGAAAAAGATCAGAAAAAGGAAAGCAAAAGAAAAGCAAAATTCGAAGAAGGAGAATCAAAGGCATCAAGCTCCGTTCTCAATTAGCAACAGCAGATCAAGAATCGCTTCAGATCTAAATTACCACAGCTCTTCTACCTGTTCTTCGCGTAGTTCGGCGCCATTTTCATCCTCGTCCTTCTGCAGTTCGTCTCCTTCCTCCTCGGAAATGAGCGACATATCATTCCGATTTTATCCAACTGCATCAAATCGACTGTTCAGACAAATTAATTTCAGAAAAATCTTTAGCAGTTGGTTCGTGCTACTGGTATGTCTTTTAAGCTTGGTATTATGGGGAAAAATCGGAGCTATTATCTCCACTTCGGTTTGGATCCTCTGTTTGTACCGGCGGAGGATCGGATTCAGGTTACCGGACGACACGGCCAGTGCAACGGTGATGAGTTACGGGGAATATAATAAGAAAAGAATCTCCATGGAAGGATTCCTGAAGACAGACCGTTTAGGTGCTCAGAATTCAATCTTACGCATCGATTGA

mRNA sequence

ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCTGGTGGCCCTGTCAGAACGGTGCGATGTAAGGACTCTTCTTCAGACGAGCATCTTTTTCCATCCATCACGGTGGAGGAACATGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGATCACCATAAAAAGAAAGGCGGTGCCGGTTCTTTGTCACGGGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGCGAAAAAGATCAGAAAAAGGAAAGCAAAAGAAAAGCAAAATTCGAAGAAGGAGAATCAAAGGCATCAAGCTCCGTTCTCAATTAGCAACAGCAGATCAAGAATCGCTTCAGATCTAAATTACCACAGCTCTTCTACCTGTTCTTCGCGTAGTTCGGCGCCATTTTCATCCTCGTCCTTCTGCAGTTCGTCTCCTTCCTCCTCGGAAATGAGCGACATATCATTCCGATTTTATCCAACTGCATCAAATCGACTGTTCAGACAAATTAATTTCAGAAAAATCTTTAGCAGTTGGTTCGTGCTACTGGTATGTCTTTTAAGCTTGGTATTATGGGGAAAAATCGGAGCTATTATCTCCACTTCGGTTTGGATCCTCTGTTTGTACCGGCGGAGGATCGGATTCAGGTTACCGGACGACACGGCCAGTGCAACGGTGATGAGTTACGGGGAATATAATAAGAAAAGAATCTCCATGGAAGGATTCCTGAAGACAGACCGTTTAGGTGCTCAGAATTCAATCTTACGCATCGATTGA

Coding sequence (CDS)

ATGGACTCCATTGCTGCAACCAAATCGAAGAAGAAGAACAAATTGTTTCCGTGTTTCCGAGCGGCGGCCTCTGGTGGCCCTGTCAGAACGGTGCGATGTAAGGACTCTTCTTCAGACGAGCATCTTTTTCCATCCATCACGGTGGAGGAACATGTGCGGCCGTTGGATGGAGGCGATGGAGATTCCGATCACCATAAAAAGAAAGGCGGTGCCGGTTCTTTGTCACGGGCGCTTAAGGCCGTCTTATTCGGAACTTCATTGGCGAAAAAGATCAGAAAAAGGAAAGCAAAAGAAAAGCAAAATTCGAAGAAGGAGAATCAAAGGCATCAAGCTCCGTTCTCAATTAGCAACAGCAGATCAAGAATCGCTTCAGATCTAAATTACCACAGCTCTTCTACCTGTTCTTCGCGTAGTTCGGCGCCATTTTCATCCTCGTCCTTCTGCAGTTCGTCTCCTTCCTCCTCGGAAATGAGCGACATATCATTCCGATTTTATCCAACTGCATCAAATCGACTGTTCAGACAAATTAATTTCAGAAAAATCTTTAGCAGTTGGTTCGTGCTACTGGTATGTCTTTTAAGCTTGGTATTATGGGGAAAAATCGGAGCTATTATCTCCACTTCGGTTTGGATCCTCTGTTTGTACCGGCGGAGGATCGGATTCAGGTTACCGGACGACACGGCCAGTGCAACGGTGATGAGTTACGGGGAATATAATAAGAAAAGAATCTCCATGGAAGGATTCCTGAAGACAGACCGTTTAGGTGCTCAGAATTCAATCTTACGCATCGATTGA

Protein sequence

MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDGDSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRSRIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNKKRISMEGFLKTDRLGAQNSILRID

Homology

[Close]

BLAST of Lsi04G012740 vs. ExPASy TrEMBL
Match: A0A5A7SZR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001060 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.7e-85
Identity = 192/267 (71.91%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           MDSIA  KSKKKNKLFPCFRAAASG     VR KD S D  +FP ITV+E+VRPL G DG
Sbjct: 1   MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSED--VFPFITVDENVRPLCGCDG 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKE-NQRHQAPFSISNSR 120
           DS H KKKG AG+LSRA KAVLFGTSLAKKIRKRKAKEK+NSK E NQ HQA  SI N  
Sbjct: 61  DSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRS 120

Query: 121 SRIASDLN-YHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINF 180
              + +LN YH+SST SSR+SAPFSSSSFCSSSP+SSEMS+ISFRFYP  SNRL RQIN 
Sbjct: 121 GTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINL 180

Query: 181 RKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEY 240
           RKI S WFVLLVCLL+L+LWGK+GAI+ TSVWILCLYRRR+G +      SA  MS GEY
Sbjct: 181 RKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMSSGEY 240

Query: 241 NKKRISMEGFLKTDR-LGAQNSILRID 265
            K+RI MEGFLK +R   AQNSILRID
Sbjct: 241 YKRRIGMEGFLKRERSSSAQNSILRID 261

[Close]

BLAST of Lsi04G012740 vs. ExPASy TrEMBL
Match: A0A6J1F8B9 (uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC111443063 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.7e-77
Identity = 179/264 (67.80%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           M+SI  TKSKK+NKLFPCFRAAASG PV        + +E +FP +TV ++V P+D GD 
Sbjct: 1   MESIVVTKSKKRNKLFPCFRAAASGSPV-----GHGAPEEQVFPFMTVRDNVLPVDRGDE 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRS 120
           DS   KKKGG G+ SRA++AV+FGTSLAKKI KRKAK  QNS KE+QRH AP S  +SRS
Sbjct: 61  DSSRWKKKGGRGAWSRAIRAVIFGTSLAKKIAKRKAKHYQNS-KESQRHLAP-SWFSSRS 120

Query: 121 RIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRK 180
           R  SDLNY + ST   RSS PFSS SF SSSPSS+E SD SFR YPTASNRL+ QINFRK
Sbjct: 121 RSGSDLNYRNYST---RSSEPFSSPSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180

Query: 181 IFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNK 240
           IFS WFVLLVCLLSLVLWGK GAII TSVW+LCLYR R  FR PDD AS   MS GEYN 
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCLYRWRFRFRSPDDKASTVAMSSGEYND 240

Query: 241 KRISMEGFLKTDRLGAQNSILRID 265
             I ME FLK DRL A+NS LRID
Sbjct: 241 IEI-MEEFLKRDRLAARNSTLRID 253

[Close]

BLAST of Lsi04G012740 vs. ExPASy TrEMBL
Match: A0A6J1IWY5 (uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480657 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.1e-73
Identity = 177/273 (64.84%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEE-------HVR 60
           MDS AATKSKK  K FPCFR+ AS  PVRTVR  D ++DE +FP + VEE       +V+
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSSPVRTVRGMD-AADEQVFPFMAVEERNGMMLHNVQ 60

Query: 61  PLDGGDGDSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPF 120
           P DG    S   KK GG G+LSRALKAVLFGTSLAKKIRKRK K+K+NS +ENQR Q   
Sbjct: 61  PFDGCGDVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKRKRKQKENSNEENQRRQLLS 120

Query: 121 SISNSRSRIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLF 180
           SIS SRS   SD N+ +SSTCSSR SAPFSS+SFCSSSP+SSE+++ISFRF+PTASNRLF
Sbjct: 121 SIS-SRS---SDPNFRNSSTCSSRISAPFSSTSFCSSSPTSSEINEISFRFHPTASNRLF 180

Query: 181 RQINFRKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILC--LYRRRIGFRLPDDTASAT 240
           RQIN R     WFVLLVCLLSLVLW KIGA + TS+WILC   YRR IGFR PDD ASA 
Sbjct: 181 RQINLRNTSRCWFVLLVCLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKASAA 240

Query: 241 VMSYGEYNKKRISMEGFLKTDRLGAQNSILRID 265
            MS  EY K+ I +EGFL  DR   +NSI  ID
Sbjct: 241 AMSSDEYRKRTI-LEGFLNRDRSAVRNSITHID 265

[Close]

BLAST of Lsi04G012740 vs. ExPASy TrEMBL
Match: A0A6J1IG36 (uncharacterized protein LOC111476924 OS=Cucurbita maxima OX=3661 GN=LOC111476924 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.8e-73
Identity = 176/264 (66.67%), Postives = 196/264 (74.24%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           M+SI  TKSKK+NKLFPCFRAAASG PV       S+  E +FP  TV ++V  +DGGD 
Sbjct: 1   MESIVVTKSKKRNKLFPCFRAAASGSPV-----GHSAPKEQVFPFTTVRDNVLLVDGGDE 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRS 120
           DS   KKKGG G+ SRA++AV+FG SLAKKI KRKAK+ QNS KE+QRH AP S  +SRS
Sbjct: 61  DSSRWKKKGGRGAWSRAVRAVIFGNSLAKKIGKRKAKQYQNS-KESQRHLAP-SWFSSRS 120

Query: 121 RIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRK 180
           R  SDLNY + ST   RSS PFSSSSF SSSPSS+E SD SFR YPTASNRL+ QINFRK
Sbjct: 121 RSGSDLNYRNYST---RSSEPFSSSSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180

Query: 181 IFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNK 240
           IFS WFVLLVCLLSLVLWGK GAII TSV ILC +R R GF  PDD AS   M  GEYN 
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVSILCFHRWRFGFGSPDDKASMAAMGSGEYND 240

Query: 241 KRISMEGFLKTDRLGAQNSILRID 265
             + ME FLK DRL A+NS LRID
Sbjct: 241 IDV-MEEFLKQDRLAARNSTLRID 253

[Close]

BLAST of Lsi04G012740 vs. ExPASy TrEMBL
Match: A0A6J1FRN0 (uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446618 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.5e-72
Identity = 175/273 (64.10%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEE-------HVR 60
           MDS AATKSKK  K FPCFR+ AS GPVRTVR   +++DE +FP + VEE       +V+
Sbjct: 1   MDSFAATKSKK--KFFPCFRSTASSGPVRTVRGM-NAADEQVFPFMAVEERNGMMLHNVQ 60

Query: 61  PLDGGDGDSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPF 120
           P DG    S   KK GG G+LSRALKAVLFGTSLAKKIRK+K K+K+NS +ENQR +   
Sbjct: 61  PFDGCGNVSGRQKKGGGGGALSRALKAVLFGTSLAKKIRKKKRKQKENSNEENQRRRLLS 120

Query: 121 SISNSRSRIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLF 180
           SIS SRS   SD N+ +SSTCSSR+SAPFSS+SFCSSSP+S E+ +ISFRF+PTASNRLF
Sbjct: 121 SIS-SRS---SDPNFRNSSTCSSRTSAPFSSASFCSSSPTSPEIKEISFRFHPTASNRLF 180

Query: 181 RQINFRKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILC--LYRRRIGFRLPDDTASAT 240
           RQIN RK    WFVLLV LLSLVLW KIGA + TS+WILC   YRR IGFR PDD ASA 
Sbjct: 181 RQINLRKTSRCWFVLLVGLLSLVLWEKIGATVCTSIWILCFHFYRREIGFRSPDDKASAA 240

Query: 241 VMSYGEYNKKRISMEGFLKTDRLGAQNSILRID 265
            MS  EY KKR  +EGFL  DR   +NSI  ID
Sbjct: 241 AMSSDEY-KKRTILEGFLNRDRSAVRNSITHID 265

[Close]

BLAST of Lsi04G012740 vs. NCBI nr
Match: XP_038900051.1 (uncharacterized protein LOC120087211 [Benincasa hispida])

HSP 1 Score: 411.4 bits (1056), Expect = 6.0e-111
Identity = 219/263 (83.27%), Postives = 233/263 (88.59%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           MDSI A KSKKKNKLFPCFRAAASGGPV T RCK+ +SDEH+FP ITV++ VR  DGGDG
Sbjct: 1   MDSITAIKSKKKNKLFPCFRAAASGGPVGTARCKEDASDEHIFPFITVDDGVRSFDGGDG 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRS 120
           DS H KKK G G+LSRA+KAVLFGTSLAKKIRKRKAKEKQNSK ENQRHQAPFSISN+RS
Sbjct: 61  DSGHRKKKNGGGALSRAVKAVLFGTSLAKKIRKRKAKEKQNSKTENQRHQAPFSISNNRS 120

Query: 121 RIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRK 180
           RIASDLNYH+SSTCSSR+SAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINF K
Sbjct: 121 RIASDLNYHNSSTCSSRTSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFGK 180

Query: 181 IFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNK 240
           IFS WF+LLVCLLSLVLWGKIGAII TSVWILCLYRRRIG +  DD  SA  MS GEY K
Sbjct: 181 IFSGWFLLLVCLLSLVLWGKIGAIICTSVWILCLYRRRIGLKSSDDKVSAGAMSSGEYYK 240

Query: 241 KRISMEGFLKTDRLGAQNSILRI 264
           +R+ MEGFLK D  GAQNSILRI
Sbjct: 241 RRVVMEGFLKRDHSGAQNSILRI 263

[Close]

BLAST of Lsi04G012740 vs. NCBI nr
Match: XP_011652374.1 (uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetical protein Csa_001877 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 4.9e-89
Identity = 197/267 (73.78%), Postives = 218/267 (81.65%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           MD+IA  K KKKNKLFPCFR+AASGG    VR KD S D  +FP ITV+E+VRPL GGDG
Sbjct: 1   MDAIATPKLKKKNKLFPCFRSAASGGGHVKVRSKDGSED--VFPFITVDENVRPLYGGDG 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKE-NQRHQAPFSISNSR 120
           DS H KKKG AG+ SRALKAVLFGTSLAKKIRKRK KE QNSKKE NQRHQAP SI N+R
Sbjct: 61  DSGHRKKKGSAGAFSRALKAVLFGTSLAKKIRKRKEKENQNSKKEINQRHQAPSSIGNNR 120

Query: 121 SRIASD-LN-YHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQIN 180
           SR ASD LN Y +SST SSR+SAPFSSSSFCSSSP+SSEMS+ISFRFYP  SNRL RQIN
Sbjct: 121 SRTASDNLNFYRNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQIN 180

Query: 181 FRKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGE 240
            +KIFS WFVL+VCLL+LVLWGK+GAI+ TSVWILCLYRRR+G +      SA   S GE
Sbjct: 181 LKKIFSGWFVLVVCLLNLVLWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVGTSSGE 240

Query: 241 YNKKRISMEGFLKTDRLGAQNSILRID 265
           Y+K+RI MEGFLK DR  AQNS+LRID
Sbjct: 241 YSKRRIGMEGFLKRDRSSAQNSMLRID 261

[Close]

BLAST of Lsi04G012740 vs. NCBI nr
Match: KAA0036754.1 (uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95821.1 uncharacterized protein E5676_scaffold110G001060 [Cucumis melo var. makuwa])

HSP 1 Score: 325.1 bits (832), Expect = 5.6e-85
Identity = 192/267 (71.91%), Postives = 211/267 (79.03%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           MDSIA  KSKKKNKLFPCFRAAASG     VR KD S D  +FP ITV+E+VRPL G DG
Sbjct: 1   MDSIATPKSKKKNKLFPCFRAAASGSGHVKVRSKDDSED--VFPFITVDENVRPLCGCDG 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKE-NQRHQAPFSISNSR 120
           DS H KKKG AG+LSRA KAVLFGTSLAKKIRKRKAKEK+NSK E NQ HQA  SI N  
Sbjct: 61  DSGHRKKKGSAGALSRAFKAVLFGTSLAKKIRKRKAKEKENSKNEINQMHQALSSIGNRS 120

Query: 121 SRIASDLN-YHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINF 180
              + +LN YH+SST SSR+SAPFSSSSFCSSSP+SSEMS+ISFRFYP  SNRL RQIN 
Sbjct: 121 GTASDNLNLYHNSSTRSSRTSAPFSSSSFCSSSPASSEMSEISFRFYPNGSNRLLRQINL 180

Query: 181 RKIFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEY 240
           RKI S WFVLLVCLL+L+LWGK+GAI+ TSVWILCLYRRR+G +      SA  MS GEY
Sbjct: 181 RKILSGWFVLLVCLLNLILWGKLGAIMCTSVWILCLYRRRMGLK----KGSAVAMSSGEY 240

Query: 241 NKKRISMEGFLKTDR-LGAQNSILRID 265
            K+RI MEGFLK +R   AQNSILRID
Sbjct: 241 YKRRIGMEGFLKRERSSSAQNSILRID 261

[Close]

BLAST of Lsi04G012740 vs. NCBI nr
Match: KAG6591997.1 (hypothetical protein SDJN03_14343, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.1 bits (767), Expect = 1.9e-77
Identity = 180/264 (68.18%), Postives = 200/264 (75.76%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           M+SI  TKSKK+NKLFPCFRAAASG PV        + +E +FP +TV ++V P+D GD 
Sbjct: 1   MESIVVTKSKKRNKLFPCFRAAASGSPV-----GHGAPEEQVFPFMTVRDNVLPVDRGDE 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRS 120
           DS   KKKGG G+ SRA++AV+FGTSLAKKI KRKAK  QNS KE+QRH AP S  +SRS
Sbjct: 61  DSSRWKKKGGRGAWSRAVRAVIFGTSLAKKIAKRKAKHYQNS-KESQRHLAP-SWFSSRS 120

Query: 121 RIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRK 180
           R  SDLNY + ST   RSS PFSSSSF SSSPSS+E SD SFR YPTASNRL+ QINFRK
Sbjct: 121 RSGSDLNYRNYST---RSSEPFSSSSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180

Query: 181 IFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNK 240
           IFS WFVLLVCLLSLVLWGK GAII TSVW+LC YR R GFR PDD AS   MS GEYN 
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCWYRWRFGFRSPDDKASTVAMSSGEYND 240

Query: 241 KRISMEGFLKTDRLGAQNSILRID 265
             I ME FLK DRL A+NS LRID
Sbjct: 241 IEI-MEEFLKRDRLAARNSTLRID 253

[Close]

BLAST of Lsi04G012740 vs. NCBI nr
Match: KAG7024872.1 (hypothetical protein SDJN02_13691 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.5 bits (763), Expect = 5.6e-77
Identity = 179/264 (67.80%), Postives = 200/264 (75.76%), Query Frame = 0


Query: 1   MDSIAATKSKKKNKLFPCFRAAASGGPVRTVRCKDSSSDEHLFPSITVEEHVRPLDGGDG 60
           M+SI  TKSKK+NKLFPCFRAAASG PV        + ++ +FP +TV ++V P+D GD 
Sbjct: 1   MESIVVTKSKKRNKLFPCFRAAASGSPV-----GHGAPEKQVFPFMTVRDNVLPVDRGDE 60

Query: 61  DSDHHKKKGGAGSLSRALKAVLFGTSLAKKIRKRKAKEKQNSKKENQRHQAPFSISNSRS 120
           DS   KKKGG G+ SRA++AV+FGTSLAKKI KRKAK  QNS KE+QRH AP S  +SRS
Sbjct: 61  DSSRWKKKGGRGAWSRAVRAVIFGTSLAKKIAKRKAKHYQNS-KESQRHLAP-SWFSSRS 120

Query: 121 RIASDLNYHSSSTCSSRSSAPFSSSSFCSSSPSSSEMSDISFRFYPTASNRLFRQINFRK 180
           R  SDLNY + ST   RSS PFSSSSF SSSPSS+E SD SFR YPTASNRL+ QINFRK
Sbjct: 121 RSGSDLNYRNYST---RSSEPFSSSSFYSSSPSSTEKSDSSFRLYPTASNRLYTQINFRK 180

Query: 181 IFSSWFVLLVCLLSLVLWGKIGAIISTSVWILCLYRRRIGFRLPDDTASATVMSYGEYNK 240
           IFS WFVLLVCLLSLVLWGK GAII TSVW+LC YR R GFR PDD AS   MS GEYN 
Sbjct: 181 IFSGWFVLLVCLLSLVLWGKTGAIICTSVWLLCWYRWRFGFRSPDDKASTVAMSSGEYND 240

Query: 241 KRISMEGFLKTDRLGAQNSILRID 265
             I ME FLK DRL A+NS LRID
Sbjct: 241 IEI-MEEFLKRDRLAARNSTLRID 253

The following BLAST results are available for this feature:

BLAST of Lsi04G012740 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G012740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZR0	2.7e-85	71.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F8B9	4.7e-77	67.80	uncharacterized protein LOC111443063 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A6J1IWY5	1.1e-73	64.84	uncharacterized protein LOC111480657 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IG36	1.8e-73	66.67	uncharacterized protein LOC111476924 OS=Cucurbita maxima OX=3661 GN=LOC111476924...	[more]
A0A6J1FRN0	3.5e-72	64.10	uncharacterized protein LOC111446618 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lsi04G012740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900051.1	6.0e-111	83.27	uncharacterized protein LOC120087211 [Benincasa hispida]	[more]
XP_011652374.1	4.9e-89	73.78	uncharacterized protein LOC105435019 [Cucumis sativus] >KAE8651304.1 hypothetica...	[more]
KAA0036754.1	5.6e-85	71.91	uncharacterized protein E6C27_scaffold20G00330 [Cucumis melo var. makuwa] >TYJ95...	[more]
KAG6591997.1	1.9e-77	68.18	hypothetical protein SDJN03_14343, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7024872.1	5.6e-77	67.80	hypothetical protein SDJN02_13691 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi04G012740 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..73
None	No IPR available	PANTHER	PTHR34379:SF6	PROTEIN, PUTATIVE-RELATED	coord: 2..253
IPR040411	Uncharacterized protein At5g23160-like	PANTHER	PTHR34379	OS07G0553800 PROTEIN	coord: 2..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G012740.1	Lsi04G012740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane