Lsi04G012600 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTTTGCTTTGAACAGATCGGTGGCGTGCCCTTGTCGCAGTTAAATGTATATATCTTCAACGACGCCAAAAGCTTGATGTACGATTTCCGCAAGTGCATGAGTCAAGTTATAATATAAAACGATTAAGTCCGAGTATCATTGCACTGAAGACCTTGTTACAACTCAAATACTAAGCTATTCAAGAATTGAATCGACTTTAGTTAAGGAATCAACTTCGAGTTTTGTTTTGAGAAAAGAAAATAAAGAAAGTAAAAGCAATTGAAAAATCAAGAGATCAAAGCGTTCTAGGGTGTAGACATCATTAATTACTTCATTAAATTAAGATTTAGGGTTTTCATGGAATTATAAGCAAACACTACAACAAAATATACATTTGATGACACTTGAATAGTAGCACATTTTGATAGGAGAGAGAAAAAACAGTTATTAAAGCTAATTTCACGCGTTTTTGGCGGGAAAAAACGGAGTTTTTCGGATTTTTTGAAATTAATCACTGTTTTTTTGTGACACTAATTCATGACACTAAATAATAGTCATTAAATGTAGGAATATGAAAAAGGCGCGATTTTGGCGGGAAGAGACGGAAAATTTCGGAATTCTCGACTATTATGACAGTTTTTTTGTGTCACCAATTTATGACGAGTGACGGTTTTTTAGAGTCATTAAATTGAAACAAAAAAAAGGCGGTTTTAGAAAAAAAAAAAAAAAATGAGAATTTTGGATTTTTAGAATTTTATGACCATTTTTTTAGTGTCATGAATATAGAACTTGAGTTAATTATCATTAAAGAGCATATTCATTGAATCTAATTCGAGTCCTATATTGATGACACTAAAAAACAATAAAACAAATTTAACAATCCAAAATTCTGATGATAGGCTAATTAATTTTAAATTCGAAAAATATTATTAGTGGTTAGTAAATTTTAATTTTAATACTAAATTTGTGTAATTTAATTATAGGAACCAAGATAGATTAGGGATTATGCTCATTTCGGATCAAAGAAATTATATGCGTGGGCAAAAAATTTTAATATCTACCAACACAAACTCTATGGGCATAAATCCTTAAGCCTAACAAACTATGTGGGCCCATATTTTAGTCTTAAGCCCAATTTTGATTTTTTCCCAAATTTTATTTTCCCCCTTCACTTTAGCTTTCCCTCTAACAAACCCCCCTCTCACGATTTCCCTCATCCTCTCCCTCTCACTCACAATCTTCATCTTCCTCTCCCTATCCCTCTCACAGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCGCCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCATAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGTCGCCGTCGCACGGCAGAAGTCCGCCGCCGCCGTCGCACAGAAGAAGTCCGCCGGCCCCGTCGTACAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCACCGTCGCACAGCAGCTGTCCGCCGCCGCCGTCGCACAGCAGATCCTCCACCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGGTGAAGCTGCCTTTTGATTAGCAAATTCTATGTCTAGATCATTGTTTCATTAACAAATTTTGGTTTAAAAATCTTATTTTTTTCCCCTTTTGATTTACTTATGTTGTCATGGCGTTTCTCAGAGGAAAGTAGAGACAAGGTTACTCTTTTGGTATCTAAAGTTAACATAGAAATTGCTTGGTTCTGGTGGTTTTGGTCATTGAAAAATTCTCTTTTTTGATTCTGATTTAGGTCCATTTTTCAAGTTTCTTCAGTTTATAATTATACAGTTATGGATTTTTTAAATTTGTTTATAACACTTGGGTGTTCTTTGTTTGTAGTTTAGACTTGATTGAAGGAGTTTAAAGTGAGGTTTACGGTTGCTTTGAGTAAGTTTGCTCATTTCGAACACTATTTGAGTTTTCAAATGAGGCTTCTAACTAAGTTCTTACCTTAAAACCTTGTTTTTATTGTTAAAAGACTTTTTTTAGTTAGTTTAGAAGTGCTTTAAATTGCATTTAGTAAGTGAATTTCTATTTGAAGAGTTTGTTTGTCATTTGATAATATGTTGTTGGTATATTTGTCTCATTCAAAAATTAGTTTAAAATGTTTCTTTGAGTGGAAAGTTCATGATTAATCATTGACATTGTTTTCTTTATGAGCTGGAACATTCATAATAACTAAATTTGTGTAAATGTCACATGAACCCTCTGTTGTAAGTTAGAATTTGTTCAAGATACATACCTTAATAAATAATCTAGAACATTTGCTTCTACTTGGTGCAACCTCTATAATGTCTTTTGTTTGTGCATATTGCCATCAATTGGGAATCTTTCAAGTTGGTTATTTGTAGCAAGTGGGTGGATTTGCACAAGTATTGCATCTATCTATGACTCTATGGCTTCGATCACTCTATTTTTCCTTTCATCAATGTTGTATTGACATGTATATTTGAATCCACTACTATGTGATTGTCATTAAGATACATCTACAACTTTACTGTCATAATTTGGGGTATTATGGTTGGTGTTTTTCTCATCTATTCTCTAATTTGTGAATTTGTTGTACTTTTGATAGGTTGTCATTGGTTGTTTAAGAGTTTTGTGTAAGAAACTTGTGTTAAATTTGGCTTCAATAATGTAAAACAGGGGTTGGAAGTGTTGGACAACAACTTCAATTGGTAGAGGTTTGGCAGTGTGAAGAGAGTTGGCAATTGTGCTGGAAAAGAATAAGCTTGGCGACGTTGTTTTTGTAAGTGAAACCTTAGCTTTACACTCTGAAATGAAAGAACTTAAACATGGGTAAATTTATGTTTGAGGTGGACATGCATATATCACCAAACGGACAATTATCCACTTTTTTAACATTTTAGGTTGTTTTGATAGTCGAAACAACACTTATGAACTTTTTTGAAACTTTCTTCATTTTCTTTGAATTGTAGACAATTATTTATTTGTGGGTATGAGAAGTCCTATCAGAAACTTCTTTATTAGTTTTCCTTCACAAGATTTTTGGGTATGGTCTCTGAATTCTTTGCATATATCAGCAAAGTTTTATGGCAAAAGACTAGTGATTTTAAGTTGATGATTATATATTTGTTGTAGTTGCATGTTACTTAAAAACCTAATTGAAAATGAGTGTAACTTAGTATCAAATAGTACATGTTTATATTTATTTTTTTGACTTGGTTGGGTGAAAAAATTTAGGAAACACCAACTCTGACTTATGTTTCTTCTTCTTAGCAACAAGGTCTTCACCTAGGCTTCATCCGCTTACTTTTCAGCTCACACTTACTTTGAACCAGGTTTATGTCTTTGACTTCTTCATTTTTTGTCAACATATCATTAAAATGCATCAAGATATATAGATAAACTGTTTCAATGCTCACCAAGTTTTGAAATTTTTTAACCAAATTACACGTGTACAATGTTCTTTTTATCAGGTTTCTTTTGGGGGAGGGGGGATTTGACAATAATTTAATTCTCTAATTTTCTGCAATGGACAAATCATGGATGATGAAAAACAGATTATCTAGAGAATATGAGTTGGGAGTTGAAACATTCATTGAATTTGGTTTGCATCATGGCAATGGTTCCAACTTGATTCGATGTCCATGTTTAAAATGTGGAAATCGTATATCTAAAGATGTTTCAATAGTTAGGGATCACTTGTATGTCACTTGTATGTTTCAATAGTTAGGGATCACTTTACAACTAATTTGGTTTATTATGCTATGTAATTCCTTTATTCTAATGTTATGATATTTGTTAATAGAAGGATGATAGAAAGTCAAACAAAGGTTTAGAAATTTTGTCATCGACACCTATTCAAAGTTCACCAGTTGCTTTACGTTGTTTACTTCGTGAGCTTCAACACATTGGCTCATCTATTCAAATGACTGTACCAATCGAAGTATTTGGTGTCCAACGCAAGTGTTGCATTTTGCTTGAGGTTTTACGAGATTTTTGTCATATGCGCCCAATATGCACTCCTTGTCTTGACGCATATATGATGTAAGTGATGTTAAAATAACAATTTTTAGCACTAAAAGATGTATATTGAGTGAAATATAAAGTTTAATTAATATTTTAGGTACTTATACAAATTGATGGAGAAATCAAACCTCTTGAGTTTGTACAAGTTTTTGGATGCTGGTTCGATCTCAATCTCAAGTTACAAAGAATCTCGAGCTAATTTGTTGTATTCAAGAATGCAAGGAATGGAATCAAATCAACTTCTCATCTTCCCTTACAATTCTGGGTATGTTTTATTTAATACATCGTATCAAATGTCGTGACAATAATATAATTGATGTTATGATCCTTATAATTTGTAGGAATCATTGGACATTGATCATTATTGATCAATCAAAAAGCAGCGTATTTTGGATGGACCCTTTAAAAAATCGACTTGACCAAGATATCATCGATGTGATTGGCATGTACGTATGTTACATATAGAATTTCACAACTTTAGTTAATGTGAATATAGAAAGTAGAAAGACATTATATATTTGAAATCATTCACAGGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGGTATATTATTTCGTAAACAACAAAATTTAGTGAGTTTATTCAATAAATATGTTCTTATTTAAGTAGCCTATGTTTTGTATTTTATACACACATGCAGTGTCCTAAGCAATCGGGGGTGGTTGAATGTGGATATTATGTCATGCGATATATGCGTGAGATAATATTACAATGAACCACGTCAATTTTAGAAATAGTACGTATTCAAATTTGAACCGATTTAACTAGGATTTTTAGTTCATGTGGCTTATTCGTTTTCTTTGTTTATAGATGAAAGACGTACCACCAAAATACTCACAAGATGATATTGATGTAGTGCGAAGTGAGTGGGCAGAGTATGTGGGATCACACATATTCTTTGCATAGGATTTGTGCCAACATTGGTAATGGGATCATGCGGAAAACAAACTATTGTGGATGAATTACTCCTATTTTGTTGCTCAATCTAGATTGGAATGCATTTTGCAAATGACTTTTTGTGGGGTCCGTAAGAATGACTTTAGATGATATGGTCCGTAAGAATGCATTAGGTGTCGTCGTTTTTGAGGTACTGTAAGATTCTTATTTATTTGATCTATTCTACATCTTCCATGTTTTTTTGTAAGAGTAATATTGTTATTTGCAACATGTTTTGTATTATATACTTTTTCCACTAACAATTTTATATGTTGGCTTCAATTTCTTGTTTGGACAAGGTTGGTAGTGGACACTTGATATTGCCTATGGCATTTTGAAAATGTTTGTTAGTAAAGAGGTAAAGATGAGCGTGTTGATTTCATTCTATATTTAACATGATTTTATTGCTCCTTAGGATACACGTTTAATCTTACTCTCTTATATTTTATGATTGTCCACAGTTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACGTAAGAAGTTTTGAAGTTGGAGTGTCTTTGGTGATTAAGAGGTATATCATATAA ATGCGTTTTGCTTTGAACAGATCGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCGCCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCATAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGTCGCCGTCGCACGGCAGAAGTCCGCCGCCGCCGTCGCACAGAAGAAGTCCGCCGGCCCCGTCGTACAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCACCGTCGCACAGCAGCTGTCCGCCGCCGCCGTCGCACAGCAGATCCTCCACCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGAAGGATGATAGAAAGTCAAACAAAGGTTTAGAAATTTTGTCATCGACACCTATTCAAAGTTCACCAGTTGCTTTACGTTGTTTACTTCGTGAGCTTCAACACATTGGCTCATCTATTCAAATGACTGTACCAATCGAAGTATTTGGTGTCCAACGCAAGTGTTGCATTTTGCTTGAGGTTTTACGAGATTTTTGTCATATGCGCCCAATATGCACTCCTTGTCTTGACGCATATATGATGTACTTATACAAATTGATGGAGAAATCAAACCTCTTGAGTTTGTACAAGTTTTTGGATGCTGGTTCGATCTCAATCTCAAGTTACAAAGAATCTCGAGCTAATTTGTTGTATTCAAGAATGCAAGGAATGGAATCAAATCAACTTCTCATCTTCCCTTACAATTCTGGGAATCATTGGACATTGATCATTATTGATCAATCAAAAAGCAGCGTATTTTGGATGGACCCTTTAAAAAATCGACTTGACCAAGATATCATCGATGTGATTGGCATGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGTTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACGTAAGAAGTTTTGAAGTTGGAGTGTCTTTGGTGATTAAGAGGTATATCATATAA ATGCGTTTTGCTTTGAACAGATCGCAGTTCGCGCAGAACATTTCTCCAGCAGTTTCGTCGCACAGCAGTGGTTCGCCGCCGCTGTCGCACAGCAGCAGTCCGCCGCCGACGTCGCACAGCAGCAGTCCGCTGCCGCCGTCGCATAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGTCGCCGTCGCACGGCAGAAGTCCGCCGCCGCCGTCGCACAGAAGAAGTCCGCCGGCCCCGTCGTACAGCAGAAGTTCGCCGCCGTCGTCGCACAGCAGATCCTCCGCCGCCACCGTCGCACAGCAGCTGTCCGCCGCCGCCGTCGCACAGCAGATCCTCCACCGCCGCAGTCGCACAGTAGATCCTCTGCCATCGCCGCCGCACAGCAGCTTCCGAAAGTCGCTGTTGTTTTCAGTAAGAAGGATGATAGAAAGTCAAACAAAGGTTTAGAAATTTTGTCATCGACACCTATTCAAAGTTCACCAGTTGCTTTACGTTGTTTACTTCGTGAGCTTCAACACATTGGCTCATCTATTCAAATGACTGTACCAATCGAAGTATTTGGTGTCCAACGCAAGTGTTGCATTTTGCTTGAGGTTTTACGAGATTTTTGTCATATGCGCCCAATATGCACTCCTTGTCTTGACGCATATATGATGTACTTATACAAATTGATGGAGAAATCAAACCTCTTGAGTTTGTACAAGTTTTTGGATGCTGGTTCGATCTCAATCTCAAGTTACAAAGAATCTCGAGCTAATTTGTTGTATTCAAGAATGCAAGGAATGGAATCAAATCAACTTCTCATCTTCCCTTACAATTCTGGGAATCATTGGACATTGATCATTATTGATCAATCAAAAAGCAGCGTATTTTGGATGGACCCTTTAAAAAATCGACTTGACCAAGATATCATCGATGTGATTGGCATGTCTTTCAAGAGTGTGAAAAAGAAGAAGCTTACTTGGAAATCAATCAAGTTGGTCTTTGAAATATTCGAGAAAGATGTTATGTGGAAAGAATACGCTCACGTAAGAAGTTTTGAAGTTGGAGTGTCTTTGGTGATTAAGAGGTATATCATATAA MRFALNRSQFAQNISPAVSSHSSGSPPLSHSSSPPPTSHSSSPLPPSHSRSSPPSSHSRSSAVAVARQKSAAAVAQKKSAGPVVQQKFAAVVAQQILRRHRRTAAVRRRRRTADPPPPQSHSRSSAIAAAQQLPKVAVVFSKKDDRKSNKGLEILSSTPIQSSPVALRCLLRELQHIGSSIQMTVPIEVFGVQRKCCILLEVLRDFCHMRPICTPCLDAYMMYLYKLMEKSNLLSLYKFLDAGSISISSYKESRANLLYSRMQGMESNQLLIFPYNSGNHWTLIIIDQSKSSVFWMDPLKNRLDQDIIDVIGMSFKSVKKKKLTWKSIKLVFEIFEKDVMWKEYAHVRSFEVGVSLVIKRYII Homology
BLAST of Lsi04G012600 vs. ExPASy TrEMBL
Match: A0A5D3D5Q6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00960 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. ExPASy TrEMBL
Match: A0A5D3CDJ5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00340 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. ExPASy TrEMBL
Match: A0A5A7TBT8 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001790 PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.4e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. ExPASy TrEMBL
Match: A0A5A7UJF8 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00380 PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.4e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. ExPASy TrEMBL
Match: A0A5D3CX60 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003330 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 9.9e-54 Identity = 104/188 (55.32%), Postives = 138/188 (73.40%), Query Frame = 0
BLAST of Lsi04G012600 vs. NCBI nr
Match: TYK08419.1 (uncharacterized protein E5676_scaffold654G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 223.8 bits (569), Expect = 2.4e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. NCBI nr
Match: TYJ96009.1 (uncharacterized protein E5676_scaffold2612G00150 [Cucumis melo var. makuwa] >TYK05706.1 uncharacterized protein E5676_scaffold98G001870 [Cucumis melo var. makuwa] >TYK18887.1 uncharacterized protein E5676_scaffold204G00960 [Cucumis melo var. makuwa] >TYK20366.1 uncharacterized protein E5676_scaffold228G00630 [Cucumis melo var. makuwa]) HSP 1 Score: 223.8 bits (569), Expect = 2.4e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. NCBI nr
Match: XP_031742395.1 (uncharacterized protein LOC116404337 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 4.1e-54 Identity = 103/188 (54.79%), Postives = 143/188 (76.06%), Query Frame = 0
BLAST of Lsi04G012600 vs. NCBI nr
Match: KAA0039081.1 (uncharacterized protein E6C27_scaffold84G001790 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 7.1e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of Lsi04G012600 vs. NCBI nr
Match: KAA0056083.1 (hypothetical protein E6C27_scaffold323G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 7.1e-54 Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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