Lsi04G012300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G012300
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCACTA en-spm transposon protein
Locationchr04: 19113511 .. 19124594 (+)
RNA-Seq ExpressionLsi04G012300
SyntenyLsi04G012300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTTCAAAAAGGAATACGGCACTTCTTCTGCATCGATTGAAACGGCGCGTTTAAAACGCCTTAGCTTCAGTTGGCGCGTTGGTATATGAGCAATTAATTTTATATTTGGATAACAAAATTCTCTAATTTTATCTTTGTTAGCGGTAGAGTTTATCCTATTTGGCTATTATTTGGAATAGATTGTCTCACGTGCCCATGAAAGTTTCAAGATGATTTTGAAGTGATTTTTGTAAATAATTTTTTAAAAAAAATTAGAAAATTATTATAAACACCAAAAAAAAAAAAAAAAAAATATCAAACTATTTGTAAATATAGAAAAATTGCAATAGAATTTTACTGTTAAATTTTTTTTATATTTATAAATAGTTTGATTCATTTTTTTATATTTAAAGATATGCTATTTTTTATTAGAAAATTATTACTTTATTTCCCTCTATTTTTCTTTTTAAAATTCTTCTCTATTTTTATATTTTTCTCTAACTTTTACCATCCCTAATTTTTTTTTAAAAAATGTTTACCTCTAATTTTTTTAATTAAAAAACTATCATTTTTCTCACTTTCTACCTTGGTTTTTAACTCTAATTTTTTTTTCACTTTAGTTTATTTTATGAAAATTACTATAAATAGAAAAAATATCAAACTATTTATAAATATAGAAAAATTTCATTATTTATCAATTATAGAATTCTATCGTGATCTATCGCAGATAGATATGAAAATTTTTTATTTTTTAAATAATTTGACTCATTTTTCTATATTTGAAAATAGCCATTTATTTTAACTATTTTTCTAGTATTTTACTCTTAAAATTTTTTATTCCTCTCTCTTTCTTTAAAATTATTCATCAAAAAAATTTCTTATGCTCCCAAATTTTTTTATATCTCTTCAACTTTATTTCTGTCTTTATTAAATTTCTTTTCCACCTCCAACTCTTGTTTCAAATTTAAATGACTTGTACAAATACGAAACCGAGTATTAAACATTATTTGTAACACTTCTACAACACTCATTAGCTCAAAACACTTGTTCAAAAAGTTAATTTCAAACATTTCCTTAAGCCATCGAAAATCTCTTTTGATGGTTCAAAATCAATTTTAAAAATGTAGAACCAAATATTAAAATGATTGGATGAAAATCACTTTTAACAATCACTTATTAATAAATCAATTTTGTTAAAATCACTATTTCTAAAAACACTCTCAAACATGTTGGTTATGTTTGGAAGTGATTTTGGTATGGTCAAAATCACTCCCCTTTAAAATGATGATATTGGGCCTGAAATAAAATTGATTTTAAGAAAATCTAAGGGTGTGTTTGGGAGTGATAGTTGGAGTATTGATTTTAGAGAAGGAGATTTTGGAACAATTGATTTTGTAAAATTGATTTTTACAATCAAAATTATTGTTTGGTTTCAAACTTTTTAAGGTGATTTTCAAATATATAAAAGTGATTTTGAATTATTATGCTATTTTAAAAATAATTATAATAAATATCTAATTTTATTGATTTATTTTTTCATTTGTTTTATTCTTAAATTATTATATGCATGATTGATATGTGAGGTAAAAAAAATACACATAATAAAAACAAAAGAAAATTTAAAACATATATCTCATCCAATCTAGAAATGTTTGTATCATTACAAAATACTAAAACGAGATATTATCTATTGAAATATAAACTATATAACAAAAACATTAACGAGATATGAGAAGTCTTGCAATTTTCTCTCACTCCTCTTCCATCTTCCTTCAATAACAAGAAACTTCTCTTTCTTCAGCAACACTCAACTTGTTTCGGTCATTACTTGAAGGAAGCAAATCTTCATCATCGTCAAAAGGCTTGAACTTAAAGTCGGTTGTAGATTAATTCAAGTTTAGTTCCTTTATCCTATGGTGTTCCTTATTTCTAAGGTGACGTGATCATCCTATGTCTAGGCTTTTAGTCTCATATCCCTTTGTGACATCCACTTACACCCTAACCTTCTCAGCATTAGAGCTCTACTAGATCGTTAAATCAAATGGTCAGTTTAACTTACCGATTTTATCTTTTAAAATCAACAAAGAGAATGTGTTTACACAAAGTGATGTGAAGTGTCACATAACCTAAGTCATAACAATCCTAAGGCTTCCACATTGCCAAACCCCTAAAAATATTTAGCTCATGAATTTTGATAAAATAATCATCTTTATTAAATCATAAACCATAGTTACAATAAGAAGTTTGATTGATAGAATTTAAATTGGGAAATTAACAAAGAAAATAGTGTTGGAAAATAAAACAACTCAAAAGAATTTGGGCAAATCCTCAAGTGACAAGTCTTTCTCTAGGATGATTCCTCCTCTTTCAAGGAAGAATCGTGTCTTGACACACATTTATGTGGGAAGAGAAATCTTAGAGCCGCTATGCCTTAGAGGAACTTTCATTCTTAAGACTACTGACTTGAAACTTTGAGAAAATAGTGTTTGTTGAAATGAGTTTCTAGTTCCTTTTAGAACATAGCTTGGTTTTAGTTCTTTTGTTGTTTTTGGATTAAGATGAAAAATATTTTAGGTTGATTTTAAGTAAACATTATATTTAAATGGTTAGATTTTAATTTTTTATTGTTCTAAATATAGAAATTTTGAGAGAATGAATTAAGGAAGAAAGAAAAACAAACTAGGAAGAAGAGCTTGATATTTTGTAGAAAAATCTAGAAACTCATATATGGTTGTTGGGATTGAAGAACGTTACAAAACTAAAAATGTAAAATTTTTGTACTCTTAATTGTAATTAATGTAAAATCATTCATTTTTAGTTAATATATAGATATATGCATTAAACCGCCACAAACATAAGAATAATACTAATAATATGTCCCCAAAAATATTCCTTTGCTTTCATGTGAGTTTCATTAGTGTGTTTTTTTTCCTTTCAATAACAGAAATATTATTATGTTGAAGGTCTAGATAATAATACTCAACATATTCGCACAAGAACACCAACTTAATTTGTTCCTTATTTTCTATTATGGTTCATTTTGATTTGCTTTTTTCATATTACATCTCAAAGATGAGACTCCACTCATATTGTTTTCCCAATAGAAATTAATCATAATAGAACTATTTAGGTTGTTTTGGGAGTTAAGACTCCATTGGACACTTTTTAGGAACTTTTTAAGTTGTTTTTAGGGTGAAAATGTCACTTCGACACTCTTTAGGTTCTTTTTAGGTTGGTTTTTAGTTTGAAAGTCACACTTAAGCATTTTTAAGTTGTCTTGGGTGATAAAGTGTCATTTAGATACTTTTTAAGTTCTTTTTAGTTGGTTTTGAAAATCAAAAGGACACTTAGGAACTATTTAGGTTGTTTTGGGAGTTAAGAAGTCTCTTGAACACTTTTTGGAAACTTTTTAAGTTTTTTTTAGGGTGAAAGTGTCACTTAGACACTCTTTAAGTTCTTTTTCGGGTTGGTTTTGAGTTTGAAAGTCACATTTAGGCATTTTTAAGTTGTCTTGGGAGATAAAGTGTCATTTAGATACTCTTTAGGTTCTTTTTAGTTGGTTTTGAAAATCAAAAAGATACTTAGGAATTATTTTGGTTGTTTTGGGAGTTAACAAATCTCATGGGCACTTTGTAGGAACTTTTTAAGTTGTTACGAGGGTGAAAGTGTCTCTGAGACAATTTTTAGATTGGTTTTGAGTTTGAATGTCACATTTAGGCATTTTAAAGTTGTTTTAGGAGTTAAAGTGTCATTTAGACACTTTTTAGGTACTTTTTAGTTCCTAAAAGATATCCTTAAGTTTATCTAACTTCTTGCCCAAATTCTTATAAGGTTTAATTTTGTCCATTCTATTTGAAGATGAATAGGGACTGGATTAAATTTAAAAAATAGATTTTCAAGAGATTATATTGAAGGAGTTACTCAATTTATGGAAGTGGCAAAGAGGCATGTAAATGATGTAGGAAAAACTAGATGCCCATGTAAGAATTGCCAAAATTCAATGACACAATCATTAGATGGAGTAGAGCGACATTTATTTACGTACGGAATATCTCCTTTATATAGTAAATGAGTTTATCATGGAGAAGCAGCAAACTTAGCTCAATTTGAAAGAGGCGGTACTTATTCAGCAGGTAATGGATTAAGTAGGGAGTCTAATGCTGACGATGAGGACAATGACATTTTTTTTATCTTCTAATTGATTTGCAAGGGCCAATGATAACATAGGAAGAAAATGTTGACGTTGAAAAGTTTTTTTATGATGAAATTCTAGAGAATGTTGAAGAAATGAATACTAGTAACATTTTCTAGGAGTTGATGGATGAAGCACGTAACCAGTTGTACCCTGGATGTACCAAATTTTCCTCATTAAATTTTTTGGTGAAGTTGATGCATATCAAGGTTCTCAATAATTGGAGCAACAAATCGTTTAGTATGTTACTAGAGTTGCTAAAAAATGCATTTCCAATTGGTACATCTATACCTGGATCATTTTACAAAGAGAAAATTACGTGACTTAGGGCTAGGATATGATTCAATCCATGCTTGCAAATATGACTGTGTATTATTTTGGAAAGAACTAGCTAATTGTCAAATTTGTCTAGTATGTGGTGAATCTCGATATAAAACAAATAGTGGAAAGAGTAAGAAGATTCCAAATAAGGTTTTTTGTCACTTTCCATTAATACCGAGGTTGAAACGATTGTTTTTATCGAAACATATTGCTTTTGAGATGAGATGACATAAGGATAAACGAATTGATACGAATGATGTGTTACAACATCCAGCTGATGGTGCAAGATGGAAATACTTTGATAGAGAGTTTCCACAATTTGCTTCAGACTCGAGAAATGTTCGATTAGGATTAGATTCAGGCAGATTTAATCCATTTGGGAATATGAGTACAACCTATAGCATGTGGCCAGTAGTGTTTGTACTGTACAACTTGTCGCCTTGGAAGTGCATGAAAGAATCCAATTTCTTCATGTCTTTGCTTATACCTAGATCGAAGTCTCCTAAAAAAGAGATTGACGTATATTTGCAACCATTAATTGATGAGTTGAAACAATACGGAGCAAAGCTCATCTAGAGGGTTCCATAGCAGAAGGATCATTATGAACAAATGTTTGACCTTCTGCTCCATGTATCTAACAGGAATAGAAACAAGATTTAATAAAGATCCACAGAACGATGACTCAAGGAATGATCGATTTGTTTGTGGGGACTTTGAAGTATTTAAACAAAATGTGCGACCGATGGGGGGGGGGGGTCAGTTGTGAGGACGATATCTAAAGATGAGAAACGAATGTGGCATTGGTATGTATTAAACAACTGTTCTCAGATAAAACCTTATCGCATGTCCATTTTGGATAATTATAACTTCATATATTTTATTTTTGAGTTTAAATTTGTACATGTCTAAGTCAACCTTATTTCTTATATTTGTTATTATTACTAAACAGACAACATTTGAGATTGATTCGTATCAGAGGAGAGGATGAATTAGATTTATTTAGAAGACACCCATTAGAATTTTCTGATTGGTTTAGAGCACATGTAAGTGTTGTTCTCAAGTTCGAAATTTAGTTTTTAATGAGTTAATACTAAGTTATTTTAACCAACATAACATATGTAGATGTGTACTCATTACGTGAAAGATGTGAAGCATTTGATGATCTTTACTCAATAGCGTTGGGGCCTAATAATCAAGTTCGTACCTATAGTGGTTGCTTCATCAATGGAGCACGTTTTCATTACATAAAGCGTGACAATTGTCGGACTACCCAGAATAGTGGAATCATGACATATGGAGAAACCAAAAGTGATTAAACAAATTATTATGGTGTGTTGCAAGAGGTCTTAGACGCAGAATATCCTAAATGTAGACGTGTCTGCCTTTTCAAATGTAATTGATTTGACACGGATGTTAAGAAGAACAAATTTTGTTGTGATTTAGGGTTTAAGTTGATCAATGCTTCTCGTTTTTGGTACGCAGATGACCCATACATCTTAACTATGTAAGCCATACAAGTTTTCTACATTGACGACCCTAAACTTCGTAATAATTGGAAAATTGTGCAAATTGTCTAAAATAAACAAATATGGGACGTTCCAGAAGCTAAAGGATTAGAAAATGACAATATGGAGTTGTTAGAAGTAACTGGCTCGATTAGGGTTGATGAATCCATACACGATGTCACATTCTGTAGAGGCGACGTTGACCCTAGTGTTGTTGATCATCGAGAGATACATAATCAATTGAATATGAGTGCACCACCCCCAATCGATGACAACTTTATAAATGACAAACCAGAACATATAGAATCATCCACTGAAGAGAGCTTAGAAGGAATTCAATCTTTAGAATTTGATGAACAACATAGTGAATAAGAGTATAAAGTATGTAGTTAATAAATTTACCTATTAAATGTTATTTTTAAATTTAATCACTAAAATTTGATTTTGTAGTGCCATGGTACGTTCGGAATAGGTACAGATGGCATTGATTGAAGTTGAACATACGAACACTCCTGTATTGATTCTTCCACTAGGCAAGATGACCCTAGGGCATCAGGTATTAATATGATATGTATGTTTACTTACAATATGTTATTGAAGTTATCTAAAATTTGTATTTCTTTTAGGATCTCAATCACGATCTAAAAAGAAAGGTAGGCGTGTGAGAGGTCATGGTCGGAACATAGAATTGGATAGATATGTAGCTACACATGGAAAAATCAAGATTGACGTTGACGATGCTGTGAGAAAACCAATATGTGTTTTTGCCACCAAGTTTGTTTTGGCCATTGGTACTATAGTACGAAACACCATTCCATTGAGTTGTGAGAATTGGAAGGTTGTACCTATAGGAGTACGGGAACTCGTGATTGATAGGTTGGAGGTATGTTTGTATTTATTTTATACTTTTTAAGTTGTTTAAAATTTAAGAGTATACTTATACATGTATTATAGAATATGCATGCATATTTTGAGTTTGACTTAATAAAGATGGTTGTAAGGAAGTACTTGGAAGATAAGATGCAGTCAACCTTTAGGGAATATAGAGCAGACTTGCATAAAGAATACTGTGAATTTAAGGACCTTGTTGAAGCTCGTGCCAATCCACCCACAAGGTTAACGAAACCAACAGATTATAATATTTTGTGTGATCGATGGGAGTTAGATGATTGGAAGGTATGTTTTTCTCAGTTTAACATATAGTTTTACAATAATTTGGTACTAATTCCCATTACTGCTTGTATTAGAAAAAATAAGAGACGAACAAACGAAGTCGTTCCACTGTCCATTTCAACCACAAAACTGGGGCGTAGCCATTCCTCCAAGTTCAACATGAACTGGTAAAGTGCAATGTAATTATTTTTTTGTACCATGATCTCGTTGTTTATTACTAATTTTAATTATATTCATTTTATAGAAAGAAAAAAAAAGGTAGCGACGTTGACGAGGTGGAACTGTTCCACGAAAGTCATTTTCGTGAAAAGGGAGGATGGATCAATGATAAAGCAAAAGATGCATATGTAAGTTTTATTATCAAGGCTTGGTGAATTACTGTGTTATTTAATACATTTAATCTAACTAGGCATTTCATATAGCTCGAAATGCAAAAAAATCTTGACGCGTCAATTCAAGATGGTGTTCAGACAATCTCAAGTGTACAAGTGTGCAAGAAGGTATTGGATAGTCGATCAGCCCTGGTTTGTGACCCAAAATCTATAGCATCACCAACTAATACTGTGTCTTCTACACGTGACAAAGAGGAGAGGACAAAGATGATGGATGAACTAACAGATGTGAAGAAAAAATACGCAATGATGGTGGAACAAAATGAGGATTTAATTACTAAACTTAAAAAATGGGAAGATAGATGGTTCGACGTTAAAAAATTGTTGGTTCAAGAAAATGAAGGGGATGGAATTTCAAATACTTAGGTATTTTTTTAAAATTAAAGTTTAAGATTATGTGTGGCTATCATGCAGTTATTATAGCCAATTCATGCATTTAATGTCTTTATTGTATGCTTGAGTTGTAATGTGATGTGACTATCCTGCAGTTATGGTAGCCAATTCATGCATTTAGGGCCTTTATTATATACTTGAGTTGCTTTTGAATTGTGGCTATCCTGCAGTTATGGCAGCCAATCCATGCATTAGGAACTTTTTGAGTTGTTTTCAATGTGAAAGTATCACTTAGACACTCTTTAGATTCTTTTTTGGTTGGTTTGAGTTTCAAATTCACAATTGGGCATTTTAATGTTGTTTTGGGAGTTAAAGTGTCATTTAGGCACCTTTTGGGTACTTTTTAGGTGGTTTTTAAACACAAAAGGAAACTTAAGAACTATTTTGGTTATTTTGGGAGTTAACAAGTCTCTTGGGCACTTTTTAGGAACTTTTTGTGTTGTTTTGAAGGTGAAAGTGTCACTTAGACACTCTTTAGATTCTTTTTTGGTTGGTTTAAGTTTCAAATTCACACTTGGGCATTTTAATGTTGTTTTAAGAGTTAAAGTGTCATTTAGGCACCTTTTGGGTACTTTTTAGGTGGTTTTTAAACACAAAGGGACACTTAAGAACTATCTTGGTTATTTTGGGAGTTAACAAGTCTTTTGGGCACTTTTTAGGAACTTTTTGAGTTGTTTTGAAGGTGAAAGTGTCACTTAGACACTCTTTAGATTCTTTTTTGGTTGGTTTGAGTTTCAAATTCACATTTGGGCATTTTAATGTTGTTTTGGGAGTTAAAGTGTCATTTAGGCACCTTTTAGGCAACTAGGACATCAATGAAAGGGCAAACGATAGCTGACTTTTTAGCAGAGCTGACCCTGGCTGGTGTCGAGGCTGACTAAGGAAAAGCTGGGACAGAGATTTTATCATGATGTTCGGAGAACAGAGATCTTTAGTGGACCCTATCTGTCGATGGATCGTCTAACAAAAAAGGGTGTGGCGTAGGGATTTTGTTAGAATCCTAGATAGAGAATGGTACGAGTACGCCCTTAGATATAACTTTCAAGCATCAAATAACGAAGCAGAGTATGAGGCACTCATTGCAAGGTTAAGAGTTGCAAGAGAAGTAGAGATCTCTAAACTCTTAATCTTAAGTGACTCGCAATTAATTGTAAAACAGGTAACAGCAAAATACCATGCTAAAGAGCAGAGGATGGCGGCATATCTATCCAAGGTTAAAGAATTACTCGCCTCATTCCCAGCGCACGAAATCAGGCAAGTTTCGAGGTCACAAAACGCTAATGCAGATGTCTTAGCTCGGTTAGCAGCATCATATGAGACGGAGACAAGCATGATGGTACTAGTAGAAATCTTGTTCAAACCAAGTGTACATAAAGAAGACATAATGGACATTGAAGAACCAGATTCCACCAAGACTAAGAGTTTTAAGGCAAATGCTTATCCAGCTAGAATTGAGGTCGAGGCTGACCCTACTAGGACCGAGGCTGAGGCTAGGGTTAGAGAAAGAGATAATGACAAGGCTAGAAGAAATTCATCTTAGATGGATCCAATAATCAAGTATTTGAAAGATGAGAAATTACCCTAAAAAAAGGTAGAAGTTAGGCGATTGCAGAGGCAAGCATCATGCTACATCTTAAGCGACAATAAGCTCTATAAATGAAGTTATTCGTTGCCCATGTTAAAATGTCTTACACCTAGTGAAGCAGAACATGTGATGAAGGAAGTCCATGAAGGGGTATGTGGCAACCACTCTGGAGCTAGATCATTATGCCACAAGATTGTTAGACAAGGTTATTATTGGGTGACAATGCTTCGAGATGCGTGAAACTTCATGAGAGCATGTGACCTATGTTAGCACTATGCACCAATCCCAAGACAGCCACCTGAACCATTGACTAGCATCGTGAGTCCATGGTCTTTTGCACAGTAGGGAATGGACTTTATCGGTCCACTACCACAGGGCAAGGGACAAACTAAATTTGTTGTAGTGGCTATAGATTACTTCACAAAATGAGCTGAGGCGGAATCACTTGCAACTATAACGAAGAAGAACGTTACCAGATTCGTTTGGAAGAATATTGTGTGTCGATTTGGGATTCCCAAAACGATCATCACGAATAATGGAAAGCAGTTCGACAATGCAGCATTTAGTAAACTTTGCACAGACCTAAACATCAAGCATCGACGTTCATCCCCAGCGCATCCCCAAGCAAATGGGCAGGTGCAAGCAGTCAATAAAATAATCAAATTAAATCTGAAGACAAAACTGGAAGGGTTGAAAGGATTATGGGCAGAAGAATTACCAAGCATGTTATGGGCGTATAGTACAACAATAAGAACATCCACAGGGGAAACCCCTTTCTCCCTTTCTTTTGGGATTAAAGTGGTGGTTCCGGTTGAGATTGGGATGCCCTCACTGAGAGTGAAACAATTCAATCCCCAAGAAAATGAAACCTCAATGAGGTTAAACTTAGATTTGTTAGAAGAACACTGAGAAACAGCACGTCTACGCGTAGCCGAGTATAAAAATAGAAGCACAAGATCTACAATACAACCGTGAGAATGCGAAGCTTTAAGGAAGGAGAACTGGTAATAAGGAAGGTGATACAAAACACTCGAGATCCAACTGCAAGAGCGCTCGAACCAACATGGAAAGGACCATACCAAGTAATTAGAATAGTCAGACCTGACACATATGCATTAGCAGACCAATAGGGGAGAACTCTCCATCATCTGTGGAATGCATAACACCTGAAAATTTATTATCAGTAAGTCATTTTAGGATCATTCTAAACTCAAAGTGTGGCAAGAAGATACAAGCCTTGATCTCGGCCTCAACCGAGGTCGATCCTGGAAAGATGTTGAATAAAGCACACCCTAGCCAAGTGAGCGGAAGGAAGATCTTCAAGCAGATCTAAGAAAAGATATCAGATAACAAGAGAAATTGGATGGGATGGCATAGCATGGATCGGGACAAACACTGCTTAGCCTCGGTACCAAGACCTAGGCTGTCACCAAGATTTCATCTTTCAGGGAATAGGAAAGTTGAAGACATACAATATGATGATATGCAACATGGATAGACTGGATACTAACTGGCCTTGGTGCCAAGGCCGAGTCTAA

mRNA sequence

ATGGAGGTACAGATGGCATTGATTGAAGTTGAACATACGAACACTCCTGTATTGATTCTTCCACTAGGCAAGATGACCCTAGGGCATCAGAAAAAAAAAGGTAGCGACGTTGACGAGGTGGAACTGTTCCACGAAAGTCATTTTCGTGAAAAGGGAGGATGGATCAATGATAAAGCAAAAGATGCATATCTCGAAATGCAAAAAAATCTTGACGCGTCAATTCAAGATGGTGTTCAGACAATCTCAAGTGTACAAGTGTGCAAGAAGGTATTGGATAGTCGATCAGCCCTGGGAATAGGAAAGTTGAAGACATACAATATGATGATATGCAACATGGATAGACTGGATACTAACTGGCCTTGGTGCCAAGGCCGAGTCTAA

Coding sequence (CDS)

ATGGAGGTACAGATGGCATTGATTGAAGTTGAACATACGAACACTCCTGTATTGATTCTTCCACTAGGCAAGATGACCCTAGGGCATCAGAAAAAAAAAGGTAGCGACGTTGACGAGGTGGAACTGTTCCACGAAAGTCATTTTCGTGAAAAGGGAGGATGGATCAATGATAAAGCAAAAGATGCATATCTCGAAATGCAAAAAAATCTTGACGCGTCAATTCAAGATGGTGTTCAGACAATCTCAAGTGTACAAGTGTGCAAGAAGGTATTGGATAGTCGATCAGCCCTGGGAATAGGAAAGTTGAAGACATACAATATGATGATATGCAACATGGATAGACTGGATACTAACTGGCCTTGGTGCCAAGGCCGAGTCTAA

Protein sequence

MEVQMALIEVEHTNTPVLILPLGKMTLGHQKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRSALGIGKLKTYNMMICNMDRLDTNWPWCQGRV
Homology
[Close]
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match: A0A5A7US78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001230 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFR+K GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + CK 
Sbjct: 617 KKKKGCDVDEIEVFHETHFRKKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACKF 676

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 677 VLGSRS 682

[Close]
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match: A0A5D3E0V3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002850 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 531 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 590

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 591 VLGSRS 596

[Close]
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match: A0A5A7V6L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00290 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 346 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 405

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 406 VLGSRS 411

[Close]
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match: A0A5A7SWX9 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00370 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 571 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 630

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 631 VLGSRS 636

[Close]
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match: A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 31  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKV 90
           KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ V
Sbjct: 819 KKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEFV 878

Query: 91  LDSRS 96
           L SRS
Sbjct: 879 LGSRS 883

[Close]
BLAST of Lsi04G012300 vs. NCBI nr
Match: KAA0063743.1 (uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 346 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 405

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 406 VLGSRS 411

[Close]
BLAST of Lsi04G012300 vs. NCBI nr
Match: KAA0056379.1 (hypothetical protein E6C27_scaffold186G001230 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFR+K GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + CK 
Sbjct: 617 KKKKGCDVDEIEVFHETHFRKKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACKF 676

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 677 VLGSRS 682

[Close]
BLAST of Lsi04G012300 vs. NCBI nr
Match: TYK29140.1 (uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 531 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 590

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 591 VLGSRS 596

[Close]
BLAST of Lsi04G012300 vs. NCBI nr
Match: KAA0035762.1 (uncharacterized protein E6C27_scaffold403G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0 

Query: 30  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKK 89
           +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ 
Sbjct: 571 KKKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEF 630

Query: 90  VLDSRS 96
           VL SRS
Sbjct: 631 VLGSRS 636

[Close]
BLAST of Lsi04G012300 vs. NCBI nr
Match: KAA0040145.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-16
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 31  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKV 90
           KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ V
Sbjct: 819 KKKGCDVDEIEVFHETHFREKEGWINDKAKDAYLEMQRIITESTEAGVQTISTAKACEFV 878

Query: 91  LDSRS 96
           L SRS
Sbjct: 879 LGSRS 883

The following BLAST results are available for this feature:
BLAST of Lsi04G012300 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi04G012300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7US789.8e-1768.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3E0V39.8e-1768.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6L29.8e-1768.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SWX99.8e-1768.18DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TFG01.3e-1669.23Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw... [more]
BLAST of Lsi04G012300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063743.12.0e-1668.18uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa][more]
KAA0056379.12.0e-1668.18hypothetical protein E6C27_scaffold186G001230 [Cucumis melo var. makuwa][more]
TYK29140.12.0e-1668.18uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa][more]
KAA0035762.12.0e-1668.18uncharacterized protein E6C27_scaffold403G00370 [Cucumis melo var. makuwa][more]
KAA0040145.12.6e-1669.23transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa][more]
BLAST of Lsi04G012300 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G012300.1Lsi04G012300.1mRNA