Lsi04G011970 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTAAGAATAATAAAATAATGATCACTAAGGGAGTATAAAAAGAAGAAGGCATAGGAGATTGTTGTGTGTGTAAGTGTTTTATGGAAAGCAATCTCTAAAGAGTGAAACCATGTCTCTTGCTGGGAAGCTGGTGAGTGAATTAGAAATAAATGCATCTGCAGAGAAATACTACAAAGTTTTCAAAGATAAAGTTTCTCATGTTCCCAATATTTGCCCAACCATCTTCAATAAGGTTGAAGTTCATGAAGGTGATTGGGACAACCATGGCCATGGCTCAATCAAAATATGGAATTACATCCTCGGTAAGTATATAAACGATCACAACTACGCAACCTCGACCACCTCCACGACCACTCATTGTTTTATTTTTTTAAATTTGTTTTCATAAAAGTAACCTTTTTCTAATGCATCAATTTTTTTTTTTTTTCGTATATGATTGTTAAGATGGCAAGCCTGAAGTCTTCAAAGAACGAGTGGAATTTGATGATGAAAAGCTGGCGGTAACTTTGATCGGCTTGGAAGGAGATGTGTTCGAGCATTACAAAACCTTTAAGGGAATATATCAAGTTGTACCAAAGGATTCCGAGCATAGTTTGGCAATTTTGATCTTGGAATATGAGAAACTTAAAGAGGACTCGCCTTATCCATATAAGTACCTTGATGTCATGAATAAACTTACCAAGGACATCGAAGCACACCTTAAATAAAAGTCTTTTTTTTTTTTGTCGAAATCGAGCTTTCATCTCTCTGCCTATCTCCCTTATATTTTCTTTTGATGTCACGTGTGTCAAGTTTGAGTGGTCTATCTTTCTTATTATTATGCTTCTCTATGCTTAGAGAAGTAAATAATGATGAAAGCTCGAATATTATGTGTTCTTATAATATGATATAATGTTTTGAATAATTTCTATCCTCTGATCAATACAGTGTCTCATGATTTTTTTTTTAC ACTAAGAATAATAAAATAATGATCACTAAGGGAGTATAAAAAGAAGAAGGCATAGGAGATTGTTGTGTGTGTAAGTGTTTTATGGAAAGCAATCTCTAAAGAGTGAAACCATGTCTCTTGCTGGGAAGCTGGTGAGTGAATTAGAAATAAATGCATCTGCAGAGAAATACTACAAAGTTTTCAAAGATAAAGTTTCTCATGTTCCCAATATTTGCCCAACCATCTTCAATAAGGTTGAAGTTCATGAAGGTGATTGGGACAACCATGGCCATGGCTCAATCAAAATATGGAATTACATCCTCGATGGCAAGCCTGAAGTCTTCAAAGAACGAGTGGAATTTGATGATGAAAAGCTGGCGGTAACTTTGATCGGCTTGGAAGGAGATGTGTTCGAGCATTACAAAACCTTTAAGGGAATATATCAAGTTGTACCAAAGGATTCCGAGCATAGTTTGGCAATTTTGATCTTGGAATATGAGAAACTTAAAGAGGACTCGCCTTATCCATATAAGTACCTTGATGTCATGAATAAACTTACCAAGGACATCGAAGCACACCTTAAATAAAAGTCTTTTTTTTTTTTGTCGAAATCGAGCTTTCATCTCTCTGCCTATCTCCCTTATATTTTCTTTTGATGTCACGTGTGTCAAGTTTGAGTGGTCTATCTTTCTTATTATTATGCTTCTCTATGCTTAGAGAAGTAAATAATGATGAAAGCTCGAATATTATGTGTTCTTATAATATGATATAATGTTTTGAATAATTTCTATCCTCTGATCAATACAGTGTCTCATGATTTTTTTTTTAC ATGTCTCTTGCTGGGAAGCTGGTGAGTGAATTAGAAATAAATGCATCTGCAGAGAAATACTACAAAGTTTTCAAAGATAAAGTTTCTCATGTTCCCAATATTTGCCCAACCATCTTCAATAAGGTTGAAGTTCATGAAGGTGATTGGGACAACCATGGCCATGGCTCAATCAAAATATGGAATTACATCCTCGATGGCAAGCCTGAAGTCTTCAAAGAACGAGTGGAATTTGATGATGAAAAGCTGGCGGTAACTTTGATCGGCTTGGAAGGAGATGTGTTCGAGCATTACAAAACCTTTAAGGGAATATATCAAGTTGTACCAAAGGATTCCGAGCATAGTTTGGCAATTTTGATCTTGGAATATGAGAAACTTAAAGAGGACTCGCCTTATCCATATAAGTACCTTGATGTCATGAATAAACTTACCAAGGACATCGAAGCACACCTTAAATAA MSLAGKLVSELEINASAEKYYKVFKDKVSHVPNICPTIFNKVEVHEGDWDNHGHGSIKIWNYILDGKPEVFKERVEFDDEKLAVTLIGLEGDVFEHYKTFKGIYQVVPKDSEHSLAILILEYEKLKEDSPYPYKYLDVMNKLTKDIEAHLK Homology
BLAST of Lsi04G011970 vs. ExPASy Swiss-Prot
Match: Q9ZVF3 (MLP-like protein 328 OS=Arabidopsis thaliana OX=3702 GN=MLP328 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.4e-28 Identity = 60/150 (40.00%), Postives = 90/150 (60.00%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy Swiss-Prot
Match: Q9ZVF2 (MLP-like protein 329 OS=Arabidopsis thaliana OX=3702 GN=MLP329 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.4e-27 Identity = 59/150 (39.33%), Postives = 89/150 (59.33%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24 Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23 Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy Swiss-Prot
Match: P19825 (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23 Identity = 58/151 (38.41%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy TrEMBL
Match: A0A5A7T1C3 (MLP-like protein 328 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00030 PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70 Identity = 132/151 (87.42%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy TrEMBL
Match: A0A1S3BPF9 (MLP-like protein 328 OS=Cucumis melo OX=3656 GN=LOC103491905 PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70 Identity = 132/151 (87.42%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy TrEMBL
Match: A0A0A0KIU7 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G040500 PE=3 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 5.0e-68 Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy TrEMBL
Match: A0A6J1D9N8 (MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111018321 PE=3 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 7.3e-67 Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Lsi04G011970 vs. ExPASy TrEMBL
Match: A0A5A7V0Y8 (MLP-like protein 328 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00460 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66 Identity = 123/151 (81.46%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of Lsi04G011970 vs. NCBI nr
Match: XP_038877379.1 (MLP-like protein 328 [Benincasa hispida]) HSP 1 Score: 292.4 bits (747), Expect = 2.3e-75 Identity = 136/151 (90.07%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of Lsi04G011970 vs. NCBI nr
Match: XP_008450247.1 (PREDICTED: MLP-like protein 328 [Cucumis melo] >KAA0035387.1 MLP-like protein 328 [Cucumis melo var. makuwa] >TYK08661.1 MLP-like protein 328 [Cucumis melo var. makuwa]) HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70 Identity = 132/151 (87.42%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Lsi04G011970 vs. NCBI nr
Match: XP_004142319.1 (MLP-like protein 328 [Cucumis sativus] >KGN49645.1 hypothetical protein Csa_018498 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67 Identity = 128/151 (84.77%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of Lsi04G011970 vs. NCBI nr
Match: XP_038876398.1 (MLP-like protein 328 [Benincasa hispida]) HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67 Identity = 126/151 (83.44%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Lsi04G011970 vs. NCBI nr
Match: XP_022150052.1 (MLP-like protein 328 [Momordica charantia]) HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66 Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Lsi04G011970 vs. TAIR 10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32 Identity = 66/150 (44.00%), Postives = 96/150 (64.00%), Query Frame = 0
BLAST of Lsi04G011970 vs. TAIR 10
Match: AT4G14060.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 132.1 bits (331), Expect = 3.7e-31 Identity = 62/150 (41.33%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Lsi04G011970 vs. TAIR 10
Match: AT1G14940.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31 Identity = 68/157 (43.31%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of Lsi04G011970 vs. TAIR 10
Match: AT1G14950.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 4.1e-30 Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 0
BLAST of Lsi04G011970 vs. TAIR 10
Match: AT2G01520.1 (MLP-like protein 328 ) HSP 1 Score: 125.2 bits (313), Expect = 4.6e-29 Identity = 60/150 (40.00%), Postives = 90/150 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|