Lsi04G011420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G011420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEncodes a protein whose expression is responsive to nematode infection.
Locationchr04: 15762418 .. 15767937 (+)
RNA-Seq ExpressionLsi04G011420
SyntenyLsi04G011420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAAACGCCCGCCCACCACCATCTTCCTCTCTCTCTTTTTTTCAAAACTCTTTCCCTTTTGGCCGCCATGGGAAACACCTTTGGAGTCAAGAAGACGGTGAAGGTCATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGATTCAAGCTGGAGATGTCGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGTTCGAGCAAAGCCATTAGAGCTCCATCAGAAGCTCAGTACGAAGAGACTTTATTTCCTCGTAGAACTGCCTAAAGTTCCAAAAGAACAGGTTTGAAACTAAAGAGTTTAAGTTGATAGGTTAGAGTAACCTAATGTTTTATTCGTATTCATAACATTTCCTCCCTTTTTAGAACTCGAGCATTACCATTGAGACCCGACAAATAGTTGTTTCCATGTAAATTTAATGTTATATTAGTACTATTTTTTTTTAACATAGGCTCCACGACGAGTACGGTCGGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCAGCATCGGACCTAACTATCATGAAACCAAAGAGTGTATTAGCGGAGGAGGGTGGTGGAGAGAATGAGGGATCGGGATCGGGATCAGGATCAGGAGCGACACGGGTGAAGGTACGGTTGCCGAAGGCCGAGGTGGAAAGGTTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGTTTGTGGAAATGATCACAAGGAGAAGGAGAAGAAGGATATCATCAAGCCACGTGAGGTGCGTGTGCCTTTTATTTTACTTCTTTTAAATATTGCAATTTACAATATTCATAAAATTTCTAAGTCCATTTTGATGTGTAATGAATTTTATAAGTTAAAAATATATATACAAAAAAAATGGTTAGATTATTTTCAAATTTTATTTGCATATCAATTAATGTTGTGCTAATTTTTTTGGGGACAAAATTTATATTTTTAAAAATAAAGAATTAAAAATATAGAACCCTTATCCATTATGCCCTACATAGTAGATAAAGCCAGAAGGTCATCTAATAGTATATTCAAAAGTGAATTTAAAGCTTTTATCAAATAATTAATGAAAAATTAACGGATTTGAGAAAAAAAAATTGAAAGTTTATATGGAATTTAAAAGAACTAAAATAAATTAAAACCATCAATATAAAAAATATTAAAAATACACTATTACTTCTTGAATTACCAAGCTTTATTACAAAATTGGCAAATAATGGATTTTTTTTTTAAATTCATGTGTGTAACCATTACAACAAAATATTTCAGCTTTCTCATTTACTTTTGAAGTAGAATGTTTAAAAATACTTGAAAAGAAGACCAAAATATTACAAAGGTAAAAATATTCATGTGGGCTAATTCTATTAAAAATTAAAAATTTAATTAATTTAACACATGAGATTAAAATGAACAAATATATGTATACAGATATAACTATACACTCATTAATATTAATTTAAAAATGTAATCAATATTTAATTGGGTTTTTGGTTCTCAAGTAGTTGCACTTTAAAAAAATGAAAGAGTTAGTGACTATAAATTAATTAAATTAAAGATGTAAATTAAAATAGAGGACACCAAGTTGACTCCCTCACCATCCAATGAGTCAATTTTTGTTTGATTTGTGCTTCCTAGAATTTTCCTTTTTCTATTTTAAAAAAATAAGTTACCGTTAAATTAAGAATATTGAAAACTATATAAAATTACTACCAATAATTAGTTTTAAAGTGTATTCGAAGTCGATTTTGAGGGAGTTAAAATGGTTTTGAAGAATCTTTAACTGTTTTAAAAAATTAGACTCTACAACTTTTAGATTGTCGTAAAATGAGATATATTATTTTTTAAATAAATTTTTAATTTACAATTTTATCCTTCAAAATTAAGATTTATTTTATATGTCTAGTATCTTTCTCACATCATCAAAAATTTTTCCTAATTTTTAATAAGTTGAATGCAACAAGTTTTTCTTACATCATACCATATTAATTTTTTAAAATTAAACCCATTTCCAACTTAATAATTAATGTAAAAGAAAATATAATATAATATTGTGAGCAATGATTTTTTTTTTTTTTTTTTGAAGTGCAACATGGGCAATGATTTAAAACACTATAAATTATAAGAAAATTATAATTTTTATTAGTCAGATATATTTAAATTTAAAAAAATTTCAGAGATAGAAAAAATGTCAAATTATTTACAAAAAAAATAGTAAAAGAATACTGATAGACATGGATACACTTCTATCAGCATTTATGAGTAATAAACTTCTATCATTTCTATCACTGATAGACTTCTATCAGCATCTATCACATCTATTTAAAAAATTTGCTATTTTATGTAAATAGTTTCTCTTATTTTTCTATTTTTAAAATTTTCTCTTTTAAGTTATTATATCTAAAACATAGTCATTTATATTTATTTACCAAACACTATAGTCCAAACTTACAAAACCCTAATTTAGTTCATATTATATTTTTAAAAATATAATTATCAACGATTATTTTAAAAGATATAGTAATTTTGAAATAAGTGACAAATTTATTCTTCATAAAAATTAAATAACTTTAAATCTACTCAGTAGAATGATAATGATTTCATTAACGATATTTAATCGAATTAGGATACACCAAGTTGACTCTCACTATCGAATTTGTCAAATTTTGTTTTAATTAGTTGCTTTGTCATCTAACCCATTAATCACAAATTTCTTAGTGTAGCCATCTAATTTGATTACATCTCTTTCATAGAATTTTCTACCCTCAAATTGTTGATATTTCAACTTTCATATGATTCCATGGTTAATTAATATTATTGTTTTTTTTTTTTTGGTCATTGATATGGTTTTTATTTGATTATTAAATTATATTTCAAAATTTTACCCTATTATTCTTGGGTTTTGAACCTAGGTTTTCTTTGGTCTTAAGTCAAAATGTTACATTTTTACTCGAGTTTGATTTGAGTTTTGATTTTATTGTAGATTTCAAAATTTTACCTTTTTAATTCAGAAGACTCTGGTTCTTTTTTGTATTTCTATTAATAAATTTAAAAGAATTAAATTAATTATAAATAAATAGCTTTCATTAATTTTTGTCAATATTAAAATTAATTAACAACTTTACTTCCTAAGTATTTTAAATTAATTAATTAAAAGTATTGAGGATCAAAAGTGAGGTACTATTGAAAAATTCAGAGGTAGATCAAATGAAAACAAAAATCAAAACTCAGGAGTAAAAATATAACCTTTGAAACTTATGGAACAAATGAAATTGAAAATTCAAAACAAAAATGTTGAAATCTAAATAAATACAATATTCAAAGTTGAAAACTTAAATGTAAAAAATGTAACATTTGAAACTTATGGACTAAATAGAAATTAAACATTCCAAAACAAAAATATAACATAATCAAAAGAAAACTATGCTCAAAATTTAATGATTTTTTGTTTGAAAAGCAAAATTTAATTAGAAATTTTTTTGGGTTCTTTCAAATATAGAAAACTAAGTTAAACTATTTACAAAAAATAGCAAGAAAAACACTTATAGACGTTGATGGACTTGTATCAGCATCTATCAGTGATAGACTTCTATCATTTATATCACTAATAGACTTTGATAGACTTCTATCCGCGTCTATCACAACTATAAAAAAAATTTGCTATTTTGTATAAATAGTTTTTTTATTTTTCTATTTTTAAAAATTCTCCATTTAATTGCTCAAACCTGAAAAGGTATTTTTCTCAAATAGTTTTCTTAAAGAAAATAATTCATTAGTTCCTAATAATTTTCTTTTTCCATGGTTTCTAATAATCATTTACTATATTAAAATTTCAAATCTACCCTTAATTCGGATTGTAACTGTCCCACTATTAATTACAATATTTTCTTATGGCGAAGCGATCATTGCTTCCATCTCTTTCATATAGAATTTTCTACTCACGAATCATTGATACAAGCTTTTGTTTTGTTTCATAAATAATTATTATTTCTTTCTATATATCTTTTACATTATTATATTAAAAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTGAGTTATCAACAAACATGTATGTTGGAGATCAACTTTAAATTACCTTTGTTTTATATATAAATTTTAAAAAATATTTAATAAATATTTAAACTTTAATCTCAAATAAGTGTCCGAATTTTTCTAATAGATTATTGACCTATTAAATTTTTTTCTTTTAACATTCATAAACTCATTAACTAGACAAAAAATGAAAATTTATAGGTCTGGCTTAAAATTTAGTTCTATATCTAATAAATTGGCTATTTTTTTTTTACTTTTCTTAATATATAAATCTATATCCAATCAAATTTTTTTAATATATCTAATCAATCGATTAATCTTGAAAGTTGAGTATTAAAGTTGTAAATTAATCAAAGGTATAGTTAAATGTCTTATTCATTGATTTATGTTGGGATTTGTTTGAGATATAGTTAAAGACCTATTTTTAAGTTGTACTAATTCAAAATTTTAAATCATAAGCCATTAATAATGATATCGTTTTGTATATTTAAATAGAGGATGCAAAATTGACAGTCACCATATAGTCAAGTCAATTTTTGCTTTATTATTGCTTTGTCTGCCAAACCCATTTATTTCAATCTTATCATAATGTGGCCATTTTAATTCTGTCTTTTCCTTACAATATTCTTCCATCATATAGTTGATACAATTAACCTTTAATTATTAGTTTTTCTTCCTTTTTCCTTTTTGTTAAAAAAAAAAAAGTATTTATGACTAGGTATAGCGTTTTAACGGTGGGGCAAATATATTTTGTGCGATTTGATTCTCTTTTTTATTTTTAATTTTATTTTTTGTTTTTTTTAAAATATGTGGGAAGAAATGAATCTCTGTCATTAAAGTTAATAGTTCATATTTAAGGTTAGTTAAGCTAATTTTTTAAGTTGGACACACTCTTGGAACATAGATTTGAGCTTATTTTATTTTATTTTATTCTTTTTATTTTAATTTTATTTAGAACTTAGTATTTCTCATTTTTGGACTATTGTTTAGATTTTGAAACATTTTTAAGTGATGGGAAAGTTAAAATGGTAAAATATTAATATTGTTTTTTTTTTCTTTGTTTTATATAAAATTTTAAAAAAAGAATGGGTTGAAAATGCAGAAGCGACGTGTGAGTTTTATGACGACAATGGAAGTTGGAACTCAGATTGCAGTAACATCTTAGCTAACACAAGAACGACAAGATTCATGAACAAATTCATTAAAGTGATACAGTGACGATCTTTCGAGGGTACTACACGTTACGTCCTTCACTTCTACTTAAAGTATTTGAATCTTGAACAAGCTTTTGTAGAATATAGCTAGATTTACTGCCCTTTATATATACCCATGTACTTATAATTAACTTCATGGTATATATATATATATATATATATATATATATATATATAT

mRNA sequence

CTTAAACGCCCGCCCACCACCATCTTCCTCTCTCTCTTTTTTTCAAAACTCTTTCCCTTTTGGCCGCCATGGGAAACACCTTTGGAGTCAAGAAGACGGTGAAGGTCATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGATTCAAGCTGGAGATGTCGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGTTCGAGCAAAGCCATTAGAGCTCCATCAGAAGCTCAGTACGAAGAGACTTTATTTCCTCGTAGAACTGCCTAAAGTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCGGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCAGCATCGGACCTAACTATCATGAAACCAAAGAGTGTATTAGCGGAGGAGGGTGGTGGAGAGAATGAGGGATCGGGATCGGGATCAGGATCAGGAGCGACACGGGTGAAGGTACGGTTGCCGAAGGCCGAGGTGGAAAGGTTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGTTTGTGGAAATGATCACAAGGAGAAGGAGAAGAAGGATATCATCAAGCCACGTGAGGTGCGTGTGCCTTTTATTTTACTTCTTTTAAATATTGCAATTTACAATATTCATAAAATTTCTAAGTCCATTTTGATGTAAGCGACGTGTGAGTTTTATGACGACAATGGAAGTTGGAACTCAGATTGCAGTAACATCTTAGCTAACACAAGAACGACAAGATTCATGAACAAATTCATTAAAGTGATACAGTGACGATCTTTCGAGGGTACTACACGTTACGTCCTTCACTTCTACTTAAAGTATTTGAATCTTGAACAAGCTTTTGTAGAATATAGCTAGATTTACTGCCCTTTATATATACCCATGTACTTATAATTAACTTCATGGTATATATATATATATATATATATATATATATATATATAT

Coding sequence (CDS)

ATGGGAAACACCTTTGGAGTCAAGAAGACGGTGAAGGTCATGAACATCTCCGGCGAGACGATGAAACTAAACACCCCGATTCAAGCTGGAGATGTCGTCAAGGATTATCCCGGCTTTGTTCTACTCGAATCCGAGGCCGTGAAGCACTACGGAGTTCGAGCAAAGCCATTAGAGCTCCATCAGAAGCTCAGTACGAAGAGACTTTATTTCCTCGTAGAACTGCCTAAAGTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCGGCGATCAACATGAGCGCGAAGGATAGGCTAGAGAGCTTGATGTTGGCACGACGGTCAGCATCGGACCTAACTATCATGAAACCAAAGAGTGTATTAGCGGAGGAGGGTGGTGGAGAGAATGAGGGATCGGGATCGGGATCAGGATCAGGAGCGACACGGGTGAAGGTACGGTTGCCGAAGGCCGAGGTGGAAAGGTTGTTGAAGGAGAGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGTTTGTGGAAATGATCACAAGGAGAAGGAGAAGAAGGATATCATCAAGCCACGTGAGGTGCGTGTGCCTTTTATTTTACTTCTTTTAAATATTGCAATTTACAATATTCATAAAATTTCTAAGTCCATTTTGATGTAA

Protein sequence

MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELHQKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVLAEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCGNDHKEKEKKDIIKPREVRVPFILLLLNIAIYNIHKISKSILM
Homology
BLAST of Lsi04G011420 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-36
Identity = 96/217 (44.24%), Postives = 137/217 (63.13%), Query Frame = 0

Query: 1   MGNTFGVK-KTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  VK K  KVM I GET ++ TP+ A +V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L  K+ YFLVELPK+P E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEA-AERIM 180
           +TI +       +GG   +G G   G G T V++RLP++++ +L++E+ ++A A AE+I+
Sbjct: 121 VTIGR------SDGG---DGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL 180

Query: 181 GLYKTRENVCGN-----DHKEKEKKDIIKPREVRVPF 202
           G+Y  R    G      D + +     IK RE +V F
Sbjct: 181 GIYMERSGELGGGRGGVDGRRELGSGEIKAREKQVSF 208

BLAST of Lsi04G011420 vs. ExPASy TrEMBL
Match: A0A1S3C0K8 (uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.6e-91
Identity = 182/198 (91.92%), Postives = 188/198 (94.95%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTP+Q GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCG 180
            EEGGGE+E    GSGSGATRVKVRLPKAEVERLLKE KDEAEAAERIMGLYKTRE+VC 
Sbjct: 121 TEEGGGESE----GSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCE 180

Query: 181 NDHKEKEKKDIIKPREVR 199
           NDHKEKEKKDIIKPRE R
Sbjct: 181 NDHKEKEKKDIIKPREKR 194

BLAST of Lsi04G011420 vs. ExPASy TrEMBL
Match: A0A1S3BZC7 (uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.1e-91
Identity = 181/196 (92.35%), Postives = 187/196 (95.41%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTP+Q GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCG 180
            EEGGGE+E    GSGSGATRVKVRLPKAEVERLLKE KDEAEAAERIMGLYKTRE+VC 
Sbjct: 121 TEEGGGESE----GSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCE 180

Query: 181 NDHKEKEKKDIIKPRE 197
           NDHKEKEKKDIIKPRE
Sbjct: 181 NDHKEKEKKDIIKPRE 192

BLAST of Lsi04G011420 vs. ExPASy TrEMBL
Match: A0A6J1FSC9 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-78
Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  P+QA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLY--KTRENV 180
           AEEGG + E      GS ATRVKVRLPKAEVER+LKESKDEAEAAERIMGLY  K RE+V
Sbjct: 121 AEEGGEQRE------GSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESV 180

Query: 181 CGNDHK-EKEKKDIIKPREVR 199
           C N+ K EKEK  IIKPRE R
Sbjct: 181 CQNERKMEKEKDVIIKPREKR 195

BLAST of Lsi04G011420 vs. ExPASy TrEMBL
Match: A0A6J1FVP5 (uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.7e-78
Identity = 166/199 (83.42%), Postives = 177/199 (88.94%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  P+QA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLY--KTRENV 180
           AEEGG + E      GS ATRVKVRLPKAEVER+LKESKDEAEAAERIMGLY  K RE+V
Sbjct: 121 AEEGGEQRE------GSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESV 180

Query: 181 CGNDHK-EKEKKDIIKPRE 197
           C N+ K EKEK  IIKPRE
Sbjct: 181 CQNERKMEKEKDVIIKPRE 193

BLAST of Lsi04G011420 vs. ExPASy TrEMBL
Match: A0A6J1JB09 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484144 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 6.0e-78
Identity = 167/201 (83.08%), Postives = 175/201 (87.06%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG+KKT KVM +SG+T+KL  P+QA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGLKKTAKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKVPKEQAPRRVRS INMSAKDRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSEINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLY--KTRENV 180
           AEEG GE E      GS ATRVKVRLPKAEVER+LKES+DEAEAAERIMGLY  K  ENV
Sbjct: 121 AEEGSGEKE------GSEATRVKVRLPKAEVERVLKESRDEAEAAERIMGLYMAKATENV 180

Query: 181 CGNDHK-EKEKKDIIKPREVR 199
           C N  K EKEK  IIKPRE R
Sbjct: 181 CQNGQKMEKEKDVIIKPREKR 195

BLAST of Lsi04G011420 vs. NCBI nr
Match: XP_038891934.1 (uncharacterized protein At1g66480 [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 187/198 (94.44%), Postives = 193/198 (97.47%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMNISGETMKLNTP+QAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPKV KEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKVSKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCG 180
           AEEGGGE++GSGSGSG+ ATRVKVRLPKAEVERLLKE KDEAEAAERIMGLYKTRENVC 
Sbjct: 121 AEEGGGESDGSGSGSGA-ATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRENVCE 180

Query: 181 NDHKEKEKKDIIKPREVR 199
           NDHK++EKKDIIKPRE R
Sbjct: 181 NDHKDEEKKDIIKPREKR 197

BLAST of Lsi04G011420 vs. NCBI nr
Match: XP_008454773.1 (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo])

HSP 1 Score: 344.4 bits (882), Expect = 7.5e-91
Identity = 182/198 (91.92%), Postives = 188/198 (94.95%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTP+Q GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCG 180
            EEGGGE+E    GSGSGATRVKVRLPKAEVERLLKE KDEAEAAERIMGLYKTRE+VC 
Sbjct: 121 TEEGGGESE----GSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCE 180

Query: 181 NDHKEKEKKDIIKPREVR 199
           NDHKEKEKKDIIKPRE R
Sbjct: 181 NDHKEKEKKDIIKPREKR 194

BLAST of Lsi04G011420 vs. NCBI nr
Match: XP_008454771.1 (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo])

HSP 1 Score: 343.2 bits (879), Expect = 1.7e-90
Identity = 181/196 (92.35%), Postives = 187/196 (95.41%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGET+KLNTP+Q GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LPK+PKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVCG 180
            EEGGGE+E    GSGSGATRVKVRLPKAEVERLLKE KDEAEAAERIMGLYKTRE+VC 
Sbjct: 121 TEEGGGESE----GSGSGATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCE 180

Query: 181 NDHKEKEKKDIIKPRE 197
           NDHKEKEKKDIIKPRE
Sbjct: 181 NDHKEKEKKDIIKPRE 192

BLAST of Lsi04G011420 vs. NCBI nr
Match: XP_004140437.1 (uncharacterized protein At1g66480 [Cucumis sativus] >KGN50757.2 hypothetical protein Csa_021521 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.7e-85
Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGETMKL TP+QAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLV+LP++PKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120

Query: 121 AEEGGGENEGSGSGSGSGA-TRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRENVC 180
            EEGGGE+E    GS SGA TRVK+RLPKAEVERLLKE KDEAEAAERIMGLYKTREN  
Sbjct: 121 TEEGGGESE---EGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAY 180

Query: 181 GNDHKEKE-KKDIIKPREVR 199
            NDHKEKE KKDIIKPRE R
Sbjct: 181 ENDHKEKEIKKDIIKPREKR 197

BLAST of Lsi04G011420 vs. NCBI nr
Match: XP_022942789.1 (uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 3.3e-78
Identity = 167/201 (83.08%), Postives = 178/201 (88.56%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  P+QA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           QKLSTKRLYFLVELPK+PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKSVL
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLY--KTRENV 180
           AEEGG + E      GS ATRVKVRLPKAEVER+LKESKDEAEAAERIMGLY  K RE+V
Sbjct: 121 AEEGGEQRE------GSEATRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESV 180

Query: 181 CGNDHK-EKEKKDIIKPREVR 199
           C N+ K EKEK  IIKPRE R
Sbjct: 181 CQNERKMEKEKDVIIKPREKR 195

BLAST of Lsi04G011420 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 177.9 bits (450), Expect = 8.7e-45
Identity = 101/176 (57.39%), Postives = 126/176 (71.59%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVM I GET KL TP+ A +V+KD+PG VLL+SE+VKHYG RAKPLE  
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q+L  KRLYF+VE     KE  PRRVRS I++SAK+RLESLMLARRS+SDL+I+KP    
Sbjct: 61  QRLEAKRLYFVVE---PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKPPGGW 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLYKTRE 177
             E   E EG+         RVKVR+PKAE+E+L+KE   EAEA ++I  L+  ++
Sbjct: 121 TTE---EEEGA-------VRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQ 163

BLAST of Lsi04G011420 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 94/171 (54.97%), Postives = 126/171 (73.68%), Query Frame = 0

Query: 1   MGNTFGVKKTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT  +MNI+GE+ KL TP++AG VVKD+PG VLLESEAVK  G+RAKPLE H
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QKLSTKRLYFLVELPKVPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120
           Q L +KR+YF+VELP+  KE+ PRRVRS I MSAK+RLE+L L+RRS+SDL++MK K+ +
Sbjct: 61  QNLESKRIYFMVELPRTWKERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTEV 120

Query: 121 AEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGL 172
            +E   E E S          VK++LPK ++E+L KES+  ++ + +I  L
Sbjct: 121 NDE---EREVSS---------VKLKLPKWKIEKLRKESESGSDFSNKITQL 159

BLAST of Lsi04G011420 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37
Identity = 96/217 (44.24%), Postives = 137/217 (63.13%), Query Frame = 0

Query: 1   MGNTFGVK-KTVKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  VK K  KVM I GET ++ TP+ A +V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L  K+ YFLVELPK+P E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSVLAEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEA-AERIM 180
           +TI +       +GG   +G G   G G T V++RLP++++ +L++E+ ++A A AE+I+
Sbjct: 121 VTIGR------SDGG---DGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL 180

Query: 181 GLYKTRENVCGN-----DHKEKEKKDIIKPREVRVPF 202
           G+Y  R    G      D + +     IK RE +V F
Sbjct: 181 GIYMERSGELGGGRGGVDGRRELGSGEIKAREKQVSF 208

BLAST of Lsi04G011420 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 131.3 bits (329), Expect = 9.3e-31
Identity = 81/176 (46.02%), Postives = 110/176 (62.50%), Query Frame = 0

Query: 1   MGNTFGVKKT-VKVMNISGETMKLNTPIQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGNT  V++  VKVM I G+  +L TP+ A D  K+YPGFVLL+SE VK  GVRAKPLE 
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  HQKLSTKRLYFLVELPKVPKEQ--APRRVRSA-INMSAKDRLESLMLARRSASDLTIMKP 120
           +Q L     YFLV+LP V K      RRV S  I++ AK+RLE LML+RR+ SD+     
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDV----- 120

Query: 121 KSVLAEEGGGENEGSGSGSGSGATRVKVRLPKAEVERLLKESKDEAEAAERIMGLY 173
                  G   ++  G G   G TRV++RLP++++ +L++ES D +E A +I+  Y
Sbjct: 121 -------GAARSDVVGDGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAY 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6NLC82.5e-3644.24Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P... [more]
Match NameE-valueIdentityDescription
A0A1S3C0K83.6e-9191.92uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A1S3BZC78.1e-9192.35uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A6J1FSC91.6e-7883.08uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1FVP52.7e-7883.42uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1JB096.0e-7883.08uncharacterized protein At1g66480 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
Match NameE-valueIdentityDescription
XP_038891934.12.1e-9394.44uncharacterized protein At1g66480 [Benincasa hispida][more]
XP_008454773.17.5e-9191.92PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo][more]
XP_008454771.11.7e-9092.35PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo][more]
XP_004140437.14.7e-8589.00uncharacterized protein At1g66480 [Cucumis sativus] >KGN50757.2 hypothetical pro... [more]
XP_022942789.13.3e-7883.08uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G01340.18.7e-4557.39Encodes a protein whose expression is responsive to nematode infection. [more]
AT1G71015.12.1e-4354.97unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G66480.11.8e-3744.24plastid movement impaired 2 [more]
AT5G37840.19.3e-3146.02BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..142
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..187
NoneNo IPR availablePANTHERPTHR33148:SF3PLASTID MOVEMENT IMPAIRED PROTEINcoord: 1..187
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..167
e-value: 1.9E-19
score: 70.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G011420.1Lsi04G011420.1mRNA