Lsi04G010900 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G010900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Differentiation-associated protein 1, putative isoform 2
Location	chr04: 13121095 .. 13123579 (+)
RNA-Seq Expression	Lsi04G010900
Synteny	Lsi04G010900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTCACTTTATTGAAAGTCAATCCATTGTGTTTGGGGATGCTAATATTATAATGTAAGTTTTAATTATTATACGTAAATTGGAATACTACTCAAGCATCTGAACTATATAATTAGTGGTGGGCTTGAGGGTTTCTTGGCTAAATTGAGATGTGTGGTGGGAACAGCCAAATCATAGAAAGTTTCTATATAAATCTGAATATACGGAAACTGAAGTGTTGGAATTAGGATCTGAGAAGCCAATCATTAGCCCAATGAAGGAAAGTTCTCCTTGGAAATATATGGGGTGCCTCACTTAGAATGGCAGCACCAAAGCACTATCCTAGGGTGAGAGGGAACATTGCAAAGAGAAGTTGATTTCTCAGCTTAGTCCTGTAACCCCTTTCAATGGTTTCATAAAATAGATTCGTCGTTTCGTTTCTATCTTTGAAGGACTAGTGATGGTAGAGATTATATTGTCTTTCATTGCTATGATAAACTTGAAAAGACATGTAAGATCAAGTACTGGGTGGTCGTCGAATCGTCACTGGATTTGAAAAATAGATGAATCTAATATGTAACAGCATAAGTCATACACAATGTTATGAGTCTATGACAATAGGAAAGACAAGAATGCGAATTGATAAACAAAACAAAAAAGTAAAGGCACAAAGATTGGTAACCCAGCTCAGTGCAATATCACCTACGTTTGGGGGCAGTGTGCCCGTTAGAAAGAGTTCAGTGATTACGATGAAGTAGTTATATGTTAAAGATCTTCTCCAAGGACTCTCATACACCCTACTCTTAGTGAATAATTTAAGTTCCCCCTAAGCTTGAGATTCCCTCTCTTGTTACACTAACACTCTTTCCACATCTTGTTTGAAACACACTTCAAATAATTTATTTAAGCTGTCCTAAGTATGAGATCCCCACAACATAAACACACTTAGACTCCTCTAAGTGTACAATAATCTTGTATTTGTGTACTGAAGCAACCAATAGGAGCAGACTTCTACAGCCAAGCCTTTCAAAACACTTGGCAACATCTTCCCAGAAAGTTCTATATCTCAGGGCTCTCACACTACAAACTTTTTATCCAAAAGAGGGGCTAACCCTAAAACAAGGTAAACAACCTTATATATATGAGCAGCTATGAAGATAACAACAGAAACGAAAAATATCTTCATCAAGAAAAAGAATGGAAAGTTGCTCCTGCGAATCAAAAAGACAAATAAGGAAAAAAAAAATCTTTCCAAACAAAGATTGCTTAGACGACAATAGAGCTCCTGACAAACCCAGGAACAAACTGCACAACATTTTGTCTGTAACAAAAAATTCAGCCAACTCAAGTGCAATAAGAGGATCCATCAAATACCTTGAAGCTTTCTCTCATGCCTTCTCATTTCTACTTTTTCAGCTACTGATTACTTTATTATATATCAACTGAATTCAATTTGATCTTGGTGATTGTGGTTTCCTTAATTATGTGTATTGATGTTCATCAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGAAGTGGACTGCAAAGAGGTCAATCTCTCAAAAAGCTGCCCCCTATCCTGCTAGAAATAGTTCTTTGATCTTCTTTTGCTATATGGTACACTTGGATGCTCATCTTTTGCTAGATGCCATACTCAGTAATGCTTGCATAGTCTTGAATGTACAAAAGCTTTTTGCTCAACATTTTGATTAGTGTAATATTGATTTTGTTTTTGAATCTTTGGACTCGTTTGATATCATTTGGAAAATTATGTAAAAATAAGTTGCAGATTAGATTATCGTTTTG

mRNA sequence

ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGAAGTGGACTGCAAAGAGGTCAATCTCTCAAAAAGCTGCCCCCTATCCTGCTAGAAATAGTTCTTTGATCTTCTTTTGCTATATGGTACACTTGGATGCTCATCTTTTGCTAGATGCCATACTCAGTAATGCTTGCATAGTCTTGAATGTACAAAAGCTTTTTGCTCAACATTTTGATTAGTGTAATATTGATTTTGTTTTTGAATCTTTGGACTCGTTTGATATCATTTGGAAAATTATGTAAAAATAAGTTGCAGATTAGATTATCGTTTTG

Coding sequence (CDS)

ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAAGGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATGACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAACGGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGTTCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAGCGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTCATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGA

Protein sequence

MKKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

Homology

[Close]

BLAST of Lsi04G010900 vs. ExPASy TrEMBL
Match: A0A5D3E421 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00660 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.2e-104
Identity = 214/242 (88.43%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 2   KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNE 61
           +K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNE
Sbjct: 9   EKWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNE 68

Query: 62  KGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVD 121
           KGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN D
Sbjct: 69  KGSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPD 128

Query: 122 TGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRL 181
           T SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRL
Sbjct: 129 TSSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRL 188

Query: 182 PEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN 241
           PEAP NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFN
Sbjct: 189 PEAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFN 248

Query: 242 EY 244
           EY
Sbjct: 249 EY 250

[Close]

BLAST of Lsi04G010900 vs. ExPASy TrEMBL
Match: A0A1S3BYZ3 (uncharacterized protein LOC103495120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495120 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.2e-104
Identity = 214/241 (88.80%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT
Sbjct: 75  GSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAP NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNE
Sbjct: 195 EAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. ExPASy TrEMBL
Match: A0A1S3BZJ0 (uncharacterized protein LOC103495120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495120 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.6e-103
Identity = 213/239 (89.12%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 5   QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGS 64
           QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS
Sbjct: 16  QVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEKGS 75

Query: 65  GITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGS 124
            ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT S
Sbjct: 76  EITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDTSS 135

Query: 125 SPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 184
           SPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA
Sbjct: 136 SPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 195

Query: 185 PTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 244
           P NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Sbjct: 196 PINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNEY 254

[Close]

BLAST of Lsi04G010900 vs. ExPASy TrEMBL
Match: A0A0A0KM52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G209990 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.5e-103
Identity = 212/241 (87.97%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KLQVTYKNVSRSSFPNVRKSTSICGTYYTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESSSQ  EASNGQ+LSSEQN DT
Sbjct: 75  GSEITGRTLSNDDSSALSQPPSNASAENGISQLNVNNESSSQLSEASNGQILSSEQNSDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDSQFTKKSSLTARERLRAARVLSRYNESKTSKSDMSSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAPTNLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNE
Sbjct: 195 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISSVMFATTYVVWKVGAIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. ExPASy TrEMBL
Match: A0A6J1CZJ1 (uncharacterized protein LOC111015920 OS=Momordica charantia OX=3673 GN=LOC111015920 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.2e-90
Identity = 196/242 (80.99%), Postives = 212/242 (87.60%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQ T +N+SR SF KV K T+F GTYGT RGIAKERR GLS SLAA GSNQVDTDTNEK
Sbjct: 15  KLQTTNENISRPSFPKVNKLTTFYGTYGT-RGIAKERRQGLSLSLAAAGSNQVDTDTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GSGITGRTL +D+SSA +Q P DASAE+ +SQL+V N  SS   EASNGQ LSS Q+  T
Sbjct: 75  GSGITGRTLPDDDSSAVNQPPLDASAESIVSQLSVNNNESSY--EASNGQGLSSNQSPGT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRY-NESKTSKSDMGSKVLEAIRESDRGKKRSRL 182
            SSPD QST+KSPLTARERLRAARVL+RY NESK SKSDMGSKVLEA+RE+D+GKKR+RL
Sbjct: 135 SSSPDSQSTRKSPLTARERLRAARVLSRYNNESKPSKSDMGSKVLEALRENDQGKKRTRL 194

Query: 183 PEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN 242
           PEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN
Sbjct: 195 PEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN 253

Query: 243 EY 244
           EY
Sbjct: 255 EY 253

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: XP_038893385.1 (uncharacterized protein LOC120082191 [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.7e-107
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQVTY+NVSR SFS VRKSTSF G YGT+RG  K+RR GLS SLAATGSNQVDTDTNEK
Sbjct: 15  KLQVTYENVSRPSFSNVRKSTSFRGMYGTIRGFGKDRRRGLSLSLAATGSNQVDTDTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSNDNSSA SQSPSDASA+NGISQLNVT++SSSQS EASNGQVLSS+QN DT
Sbjct: 75  GSEITGRTLSNDNSSALSQSPSDASADNGISQLNVTSKSSSQSSEASNGQVLSSDQNPDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPDLQSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDLQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAPTNLFDDSKRGMP+PGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE
Sbjct: 195 EAPTNLFDDSKRGMPEPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: KAA0035851.1 (uncharacterized protein E6C27_scaffold56G00140 [Cucumis melo var. makuwa] >TYK30300.1 uncharacterized protein E5676_scaffold344G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103
Identity = 214/242 (88.43%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 2   KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNE 61
           +K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNE
Sbjct: 9   EKWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNE 68

Query: 62  KGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVD 121
           KGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN D
Sbjct: 69  KGSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPD 128

Query: 122 TGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRL 181
           T SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRL
Sbjct: 129 TSSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRL 188

Query: 182 PEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFN 241
           PEAP NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFN
Sbjct: 189 PEAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFN 248

Query: 242 EY 244
           EY
Sbjct: 249 EY 250

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: XP_008454805.1 (PREDICTED: uncharacterized protein LOC103495120 isoform X1 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103
Identity = 214/241 (88.80%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KWQVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT
Sbjct: 75  GSEITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAP NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNE
Sbjct: 195 EAPINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: XP_008454806.1 (PREDICTED: uncharacterized protein LOC103495120 isoform X2 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 3.2e-103
Identity = 213/239 (89.12%), Postives = 218/239 (91.21%), Query Frame = 0


Query: 5   QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGS 64
           QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS
Sbjct: 16  QVTYENVSRSSFPNVRKSTSLCGTYCTTRGIAKERRRGLSLSLAATGSNQVDTNTNEKGS 75

Query: 65  GITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGS 124
            ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ  EASNGQVLSS QN DT S
Sbjct: 76  EITGRTLSNDNSSALSQSPSNASSENGISQLNVNNESSSQLSEASNGQVLSSVQNPDTSS 135

Query: 125 SPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 184
           SPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA
Sbjct: 136 SPDPQSTKKSPLTARERLRAARVLSRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEA 195

Query: 185 PTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY 244
           P NLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Sbjct: 196 PINLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISTVMFATTYIVWKVGGIHFNEY 254

[Close]

BLAST of Lsi04G010900 vs. NCBI nr
Match: XP_004148180.1 (uncharacterized protein LOC101222663 [Cucumis sativus] >KGN50673.1 hypothetical protein Csa_005812 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 7.2e-103
Identity = 212/241 (87.97%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 3   KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEK 62
           KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEK
Sbjct: 15  KLQVTYKNVSRSSFPNVRKSTSICGTYYTTRGIAKERRRGLSLSLAATGSNQVDTNTNEK 74

Query: 63  GSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDT 122
           GS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESSSQ  EASNGQ+LSSEQN DT
Sbjct: 75  GSEITGRTLSNDDSSALSQPPSNASAENGISQLNVNNESSSQLSEASNGQILSSEQNSDT 134

Query: 123 GSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLP 182
            SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLP
Sbjct: 135 SSSPDSQFTKKSSLTARERLRAARVLSRYNESKTSKSDMSSKVLEAIRESDRGKKRSRLP 194

Query: 183 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 242
           EAPTNLFDDSKRGMPKPGWTFQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNE
Sbjct: 195 EAPTNLFDDSKRGMPKPGWTFQFPGGSDLFFIVFSFVFISSVMFATTYVVWKVGAIHFNE 254

Query: 243 Y 244
           Y
Sbjct: 255 Y 255

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BLAST of Lsi04G010900 vs. TAIR 10
Match: AT3G56010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-36
Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 72  SNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQST 131
           +NDNS  ++   S +S++        +N+  S+S E+SNG                  + 
Sbjct: 54  TNDNSVTTTSVDSSSSSD--------SNKPVSESVESSNG------------------TA 113

Query: 132 KKSPLTARERLRAARVLNRYNES--KTSKSDMGSKVLEAIRESD-RGKKRSRLPEAPTNL 191
           KK+PLTARERLRAARVL+RY E+  K SK  MGS++L+ ++ESD + K++  LPEAPTN+
Sbjct: 114 KKAPLTARERLRAARVLSRYTEATPKPSKPKMGSQLLDVLKESDKKSKRKPGLPEAPTNM 173

Query: 192 FDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE 243
            DDS+RGMPK G TF  PGGSD+ +IAFSFVFISTVMFATT++VWK+GAIHFNE
Sbjct: 174 LDDSRRGMPKSGLTFDLPGGSDILIIAFSFVFISTVMFATTFLVWKLGAIHFNE 201

The following BLAST results are available for this feature:

BLAST of Lsi04G010900 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G010900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E421	9.2e-104	88.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BYZ3	9.2e-104	88.80	uncharacterized protein LOC103495120 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BZJ0	1.6e-103	89.12	uncharacterized protein LOC103495120 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KM52	3.5e-103	87.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G209990 PE=4 SV=1	[more]
A0A6J1CZJ1	1.2e-90	80.99	uncharacterized protein LOC111015920 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of Lsi04G010900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893385.1	1.7e-107	90.87	uncharacterized protein LOC120082191 [Benincasa hispida]	[more]
KAA0035851.1	1.9e-103	88.43	uncharacterized protein E6C27_scaffold56G00140 [Cucumis melo var. makuwa] >TYK30...	[more]
XP_008454805.1	1.9e-103	88.80	PREDICTED: uncharacterized protein LOC103495120 isoform X1 [Cucumis melo]	[more]
XP_008454806.1	3.2e-103	89.12	PREDICTED: uncharacterized protein LOC103495120 isoform X2 [Cucumis melo]	[more]
XP_004148180.1	7.2e-103	87.97	uncharacterized protein LOC101222663 [Cucumis sativus] >KGN50673.1 hypothetical ...	[more]

BLAST of Lsi04G010900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56010.1	1.6e-36	52.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..133
None	No IPR available	PANTHER	PTHR37233	TRANSMEMBRANE PROTEIN	coord: 3..243
None	No IPR available	PANTHER	PTHR37233:SF2	TRANSMEMBRANE PROTEIN	coord: 3..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010900.1	Lsi04G010900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane