Lsi04G010410 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G010410
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS1-like domain-containing protein
Locationchr04: 12193020 .. 12197889 (-)
RNA-Seq ExpressionLsi04G010410
SyntenyLsi04G010410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTTGTCTCAATTCGTGGTTCCAATCTAATCGAGGTATCTTTCTATTTCATCGATTATGCTCCCTCTCTCTGATTTTGTCAATTATTTACTTCACCATCTTGCGCATCTGCTATTGCCTACTGCGTTGCATCAATCAATCTGAATGAAAAACTTCTTTAATTGCAGTTAATTATCCACCGATGTTTTGTTTTCAAAATTAAAAATTGTAGGTTTTAATTCTTGCACGTTTGATTGTGGGGTTGCGTTGTGTATTTGAGATATTTGCAAACTATTTAAATAAATGATTCTGATACGCTTGTTGTGTTGCAATTTCTTTGTAGAAATCATACTTCTAGTTAACCATTCATATGGAGCAAGCCATAACCTGTGCAGTTTCTCTGTTTCATGTGCAATAATTTGTTCATTTCTTTATTTTGTAGGAAACCAGGATGTATATTATTTGCCAATTATTTTAAGCGGGCTACTTTATTTTGTATTTTGGAAAATCTTTAATACCATTTGTATTCCTTCATCATCTCTAGGTAATGGATGCACAAGGCGAGAAATCACTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGTATGTTCTATTACCCATTCTACTCAACTCATTGTTCCCATCGCATTAAATTGCCTTCCTAAGTAAGCAAGGTTCATTTTTTCTCACAGAAAGCTTTGTTTCTTTATTAAAAAAAAATCTACAAAATCAAGAGATCTTCTACTATCAAAAAGAAATGATAGAAGAAAAACAAAAGATCCCTTTTTGCATTTGCCTCACTCTTTATATCAAGGTTTTATGCAGTAAGCTTCACTGTGAACGTCTGGAAACTAGGCTATTTCATTTTCAGTGTTCTAGGAATTCATAAACTGCGGCTGTTGACTGTTAGTTATGACTGTTTCTTCCCCTTTCATTTAGTAGCTTTGACTATATTCATTATAACATAGAGATAGAGGTTATTTTGGATAATTTGTTAGGATCTCAATCTAACAACTAAAATTGTACTCCAATATTGAAGAGAAGTTATATTGCTCATAACCTTTCAGGAGGCTATCATATTGCTAATAGCCTTTCTAGAGGCTATCTCTCCCTCCTTTTGTTTTTTTTTTTTTGAAAAATAGACCGAACAGAAGGTCAGCTACACCTTGGTCTTCTGTTCCTAGAAGCCAAGCTGCCACTAGGGCATTGGCTACTCCAACATAAGGTTGCATCAAAACAAGGTGACCGGAGACTACAATGATGACACATTTGACGTTGCTGCAAACATTTCTTATGGTGATTGGATCGGGTTTAGAAATGGAGAGATTCGTGCTGTCGCCATGGAGGCTCTCCCACAATGACAATGGCATATGAGAACTTGTTCGACTTGACAAATCCCGCATCTAGGTTCTTGTTGTACACTACCTGTGTCGCAGGATTGGTCGTATTCTTCACAACATTGAGGATGGTAGTACCAACAGTGAGATCATTGTTGCTTTGACCCTACCATGTGATTGTCCATCCTCCACATTGATAGCCCAAGTTGTTGGCATGAGTCCCTGCAACTAGTGTCTTTCTAGCTTTTTTAGGAAGAGGAAGCAGTGACTCGTGACAGAGGGATCGTTCTTCAATAGCACAAGCGATTTTCTTACCGCCTCCCTAACCATTTCTCTATGTTTCTTGCTTCCAAGTTGGTTGGCTAGGCTGTTATTCGACAATGAGTTTTCAAAGAGACCCATAAGGAATTTTGTTCTTAATATCCTATGCATAGCATCATTGATCCTGCTCATTGGAATGATATTATTCTTCACCTGGTGAGTTAGTTCGTCGATGAACTCTATGTAGTTTTCAAGAACCATAATCATGTCAATTCCAGTACTAACTCTAGCTTGAACTGGATATGAAGAATTAGCATGTGGAGGAGAGGTGATCCTGCCAATCCTTTGCCAATCGAAAATGACAAAACCCTTGAACTTGAGCTTGTCCTTGAGGTAGCTAGTGATAAGGTCATGGTTGGCGTGCATTCTCACTCCATTCCAGCTCGAGTAAGATACCATTACTGTTGCAACTCCCCTCTTTTTATCGAGTTATAATATGCAGGCATGTGAATATTAAGCAATCCATTATAGTTAACCACAGTGTTATTTTCATTGATACTCCTAGTTGTGCCACCATCTACGAAGTGCTTAATACAGGCCTCGACATTTTGTTTTCCCGCAACAAAAGAAATCCCTTTTCGCGAATTAGAAGGAATTGCTCCTTGCAATCCAGGTATAATCTCAATCATTTGTTGAACAATCTTATGATCTTTGCTATAGCTCTCGTAGCATTGACCCCATCTAGGATCTCTGCACACCGCAATACATGGAGAAAAAACGTAAGGAATTCTAGTTGCTCTGATTTCAAGTGTTGTGGCATCCCCAATCCGCCTAAGAAGTTCCAAATCCCTAGTAACTCAAGACCAACAATTTGAGGAAAGATAGTGGCATTGTACACATTATTATGACCATGAACAACATCAATCCCATAAATCATAGGGATCTCAAGACGGGTGGCTAAAGGCCCCTATTGGATCTCATTCACCATATTGACCCAAGTCTCCGCCGTTGCTTTCTCCGCTAGTGCACTCCCTCCTCCGCTCAGTACACTCTCAATGAAATAGTTCTTCATGACGTCCGGGGTTGCAACTTTCTGTTCAATCTCAACCATTTGGCCAATTTTTTCTTCCAAAGTCATCCGACCCATAAGATCTTTGATTCTAGCACCCAATGGCTGTTTAGGGTCTTTGTATTTCAGGTAAGTTGCATCTGTAGTAACGGTCAGGCAGCAAAGCAGCAGCCAAAACCCCATCTAGGGTTTTAAGAACCGCATCATTTTGAGCTAGAATCAAAGATAATTCACAATGTGGTTAACTATCTCTCCCTCCTACAATTCACAATGGACTGATTTTCCAAAATTTTGTCTAATATATGAACTCCCCAACTCCCACTATTTATAACCACTCCACAAACTATCAAGTAATTATAATGTTAAATTACATGTCTAGTCTCTAAGCTTTTAAGTTTTTGTCCATTTGTTCCATGAACTTTAAAAGTATTTAATATGTCCCTGAACTTTTAGTTTCAGATTTGTATTTATTTGGTTCTTAAATTTATAAACTGCCTTATAGGTCCTTAAACTTTGAACTTTATGTCGCCTTTGAAATTTCAATTTTGTGTATAATAAGCCTTTGACCTATATAAGTTAATTTTTCATTTTATTAAAAAAATATGTTAGGAATCTATTAGACACAAAATTAAAAGTTGACTTGTTAGATATTTCTAAAGTTTAGGAATATTTTAGACATTTTTTAAATTTCATTGACCTTTTTGATACAGATTTGAAAGCTTAGGGACTAAACTTGTAATTTAACCTAATTATAATTATGCCACAATTAAGATTACTACTCTAACATAACTTTAGATCCTGCCTTTACTGATTGCTTCTGAAGTACTGAAATAGGTATTTGAAAGAAGTGTTGTTTGCTTTGCCATCATTGCAGGGAGTTTCGTTGTAGTTGATGAAAGTGGAAAGAAGAATGCTCTTGAATCTGGAAGCAAGGTGGCATGCATTGTTTCTCGAGTTCTATATTTTGAACAAGTTCGCGAGCTTCAAAAATCCCCAGAATGGTATGTTTTATTATATCAAATTTCAACGTATTCATTAAAATGGATTAGGCATTACTTGGTAAATTTTGGCGATTCTATTAATCGATGAAACAAATACGAGGGTCTTGCTTATGATCTAACAGATGTCCCTTTGCAAATATTTAGAAGCATGAAATTAACTTTGTTCTTAACTGTTGTGAAAAAGGTGAAGCAGATGGTTAATTTATTTATATGATTGAAATTCGATAAAGAAAACAACCAGATAGATATGCAACATTTTTATTTCTATTGCGTCTTGCACCAAAAAAATAGCTTGTTGGTATCACTATTACTAGTACATGTGGTGCCCTTGTGTCAATGCTTTTTTCTTCTACTACGGTGCAAGCTGAAACTGGAAATAAACCTACCACTCTAAATCATCCTAGGTTGGCCTAATGGCTAATATTGATCATGTAAATAATAAAATTAGAGAAAAATAGGGTCAATTCATGTCGGCCACCTATTTAAAATTTAATATATTACGAACTATCTTGACAATAAAAAAATGTAGTAGTCAGATTGTTTCATGAGAATGGTTAAAGTGCGCACACGTTGATCTGAACACACTCGGATATCCGATAAAACAATGGAAAATGTTAGTTGGTTTGGTTTGGATATCCGATATCCCTAGTCGTTCATGTGGGGAATTGATCTCCGAACAGAGATGAAAAATCCTCATGGAGACGTGGATGGGGTAGTGTATTCCAGTCCCAGCCCAGCCTGTTCTTAGATCTTAGAAAACTGGTTTCACGCACAACTTTTTGTTTTTCTAAAACTGGTAGGTTAATTTACCACACTATTTTTTTACCAATTATTGCAGGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAACTTGTATATTAATTTTAATTCCACACTTTTTGACTTAACAACTATGAATATTCATTTTGATCGTTTATTGTTAAATTTTAATTTTGTAAGTAACAGAAATTTCTGACTACCTAATTTTAAATCTGATATAATAAGTAATGATCTATGCAGTTTAGAATATCG

mRNA sequence

ATGCAGGAAACCAGGATGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAACTTGTATATTAATTTTAATTCCACACTTTTTGACTTAACAACTATGAATATTCATTTTGATCGTTTATTGTTAAATTTTAATTTTGTAAGTAACAGAAATTTCTGACTACCTAATTTTAAATCTGATATAATAAGTAATGATCTATGCAGTTTAGAATATCG

Coding sequence (CDS)

ATGCAGGAAACCAGGATGCCAGAAATCTTCAAGAATGCAATTGTTGGAGATCGAAATGAAAATCTGCAAGCACAGAATAATCGACAAGAAGAGGATGAGGTTGCTGAGGTCGACTCGAGTGATGATGATGGCCTTCCCCCTCTAGAAGCCAACACGAACAGAGCTAAACCATTAATATTACAACCAGATGCAGAATCAGAGTCTGATTCAGATTCTTAA

Protein sequence

MQETRMPEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS
Homology
[Close]
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match: A0A1S3C3W3 (probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGDRNENL+AQNN+ EED   EV+SSDDDGLPPLEANTNRAKPLILQPD ES
Sbjct: 107 PEIFKNAIVGDRNENLRAQNNQSEED---EVNSSDDDGLPPLEANTNRAKPLILQPDGES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match: A0A5D3DQ84 (Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00330 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGDRNENL+AQNN+ EED   EV+SSDDDGLPPLEANTNRAKPLILQPD ES
Sbjct: 107 PEIFKNAIVGDRNENLRAQNNQSEED---EVNSSDDDGLPPLEANTNRAKPLILQPDGES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match: A0A0A0KM30 (S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGDRNENLQAQNN+  ED   EV+SSDDDGLPPLEANTNRAKPLILQPDAES
Sbjct: 107 PEIFKNAIVGDRNENLQAQNNQPGED---EVNSSDDDGLPPLEANTNRAKPLILQPDAES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match: A0A6J1JNB5 (probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAI GD+NENLQA+NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+
Sbjct: 107 PEIFKNAITGDQNENLQAENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEET 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match: A0A6J1FVM0 (probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC111447695 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.1e-20
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAI GD+NENLQ +NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+
Sbjct: 107 PEIFKNAITGDQNENLQTENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEET 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. NCBI nr
Match: XP_038891512.1 (probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida])

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGD+NENLQAQNNR EEDEV EVDSSDDDGLPPLEANTNR KPLILQPD ES
Sbjct: 107 PEIFKNAIVGDQNENLQAQNNRPEEDEVTEVDSSDDDGLPPLEANTNRTKPLILQPDTES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 172

[Close]
BLAST of Lsi04G010410 vs. NCBI nr
Match: XP_038891513.1 (probable RNA-binding protein EIF1AD isoform X2 [Benincasa hispida])

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGD+NENLQAQNNR EEDEV EVDSSDDDGLPPLEANTNR KPLILQPD ES
Sbjct: 68  PEIFKNAIVGDQNENLQAQNNRPEEDEVTEVDSSDDDGLPPLEANTNRTKPLILQPDTES 127

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 128 ESDSDS 133

[Close]
BLAST of Lsi04G010410 vs. NCBI nr
Match: XP_004146450.1 (probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical protein Csa_005860 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGDRNENLQAQNN+  ED   EV+SSDDDGLPPLEANTNRAKPLILQPDAES
Sbjct: 107 PEIFKNAIVGDRNENLQAQNNQPGED---EVNSSDDDGLPPLEANTNRAKPLILQPDAES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. NCBI nr
Match: XP_008456911.1 (PREDICTED: probable RNA-binding protein EIF1AD [Cucumis melo] >XP_008456912.1 PREDICTED: probable RNA-binding protein EIF1AD [Cucumis melo] >TYK25826.1 putative RNA-binding protein EIF1AD [Cucumis melo var. makuwa])

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAIVGDRNENL+AQNN+ EED   EV+SSDDDGLPPLEANTNRAKPLILQPD ES
Sbjct: 107 PEIFKNAIVGDRNENLRAQNNQSEED---EVNSSDDDGLPPLEANTNRAKPLILQPDGES 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. NCBI nr
Match: XP_022991942.1 (probable RNA-binding protein EIF1AD [Cucurbita maxima])

HSP 1 Score: 107.5 bits (267), Expect = 5.0e-20
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 7   PEIFKNAIVGDRNENLQAQNNRQEEDEVAEVDSSDDDGLPPLEANTNRAKPLILQPDAES 66
           PEIFKNAI GD+NENLQA+NNRQEED   E+DSSDDDGLPPLEANTNRAKPLILQP+ E+
Sbjct: 107 PEIFKNAITGDQNENLQAENNRQEED---EIDSSDDDGLPPLEANTNRAKPLILQPEEET 166

Query: 67  ESDSDS 73
           ESDSDS
Sbjct: 167 ESDSDS 169

[Close]
BLAST of Lsi04G010410 vs. TAIR 10
Match: AT2G40780.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 50.1 bits (118), Expect = 8.9e-07
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 7   PEIFKNA--IVGDRNENLQAQNNRQEEDEVAEVDSS-DDDGLPPLEANTNRAKPLILQPD 66
           PEIFK+   I  +++  ++     Q ED+  EVDSS DDDG+PPL+ANTNR +P  ++ D
Sbjct: 107 PEIFKDTRPIPAEKSSPIE-----QHEDD-GEVDSSDDDDGMPPLQANTNRLRPFGVKCD 166

Query: 67  AESESDSDS 73
           AE++S SDS
Sbjct: 167 AETDSGSDS 169

[Close]
BLAST of Lsi04G010410 vs. TAIR 10
Match: AT2G40780.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 50.1 bits (118), Expect = 8.9e-07
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 7   PEIFKNA--IVGDRNENLQAQNNRQEEDEVAEVDSS-DDDGLPPLEANTNRAKPLILQPD 66
           PEIFK+   I  +++  ++     Q ED+  EVDSS DDDG+PPL+ANTNR +P  ++ D
Sbjct: 68  PEIFKDTRPIPAEKSSPIE-----QHEDD-GEVDSSDDDDGMPPLQANTNRLRPFGVKCD 127

Query: 67  AESESDSDS 73
           AE++S SDS
Sbjct: 128 AETDSGSDS 130

The following BLAST results are available for this feature:
BLAST of Lsi04G010410 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi04G010410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C3W31.4e-2087.88probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3... [more]
A0A5D3DQ841.4e-2087.88Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A0A0KM301.4e-2089.39S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=... [more]
A0A6J1JNB52.4e-2084.85probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 ... [more]
A0A6J1FVM07.1e-2083.33probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC11144769... [more]
BLAST of Lsi04G010410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891512.12.2e-2392.42probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida][more]
XP_038891513.12.2e-2392.42probable RNA-binding protein EIF1AD isoform X2 [Benincasa hispida][more]
XP_004146450.12.9e-2089.39probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical p... [more]
XP_008456911.12.9e-2087.88PREDICTED: probable RNA-binding protein EIF1AD [Cucumis melo] >XP_008456912.1 PR... [more]
XP_022991942.15.0e-2084.85probable RNA-binding protein EIF1AD [Cucurbita maxima][more]
BLAST of Lsi04G010410 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40780.18.9e-0749.28Nucleic acid-binding, OB-fold-like protein [more]
AT2G40780.28.9e-0749.28Nucleic acid-binding, OB-fold-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G010410.1Lsi04G010410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005634 nucleus
molecular_function GO:0003743 translation initiation factor activity