Lsi04G009880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G009880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionV-SNARE coiled-coil homology domain-containing protein
Locationchr04: 10696706 .. 10699483 (-)
RNA-Seq ExpressionLsi04G009880
SyntenyLsi04G009880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATCATGCCTAATTTAATATAGTTTGATAGCTTTGTATCATGAGTGGTTTACATTTACTTATTCCTATTATGATTTGAATTTACAGTTAAATGGGACTGAGTTTGCGGTTGTGTCTCTATTGATCTACGAAAATGCTTTCAGGTTTTTCTCCCAATATTATATTGTGTGTTATGAGGAGAATAGTGTCTTCTTCCTTTCAAGCTTTTAATCTCTTATAAGTTCATAGATGAAGTTGTGTCATCAGTCTGAGATGATATTCATCATATTTTAGGATTCCCGAGTCTCTGTCTTGCCTCCACGATAAAGTCCTTGCAGCTGCTGCAGAGGCCTCAGATTTCTTTTATCCAAACCAGAACAAACATGTAATATTGCTCTACTTTCTGGCCATTTTTCAATGTTTTTATAATTCTTCTGTCGGGAAGTGTGATTGCTGTTTTGTTTCTACTGTCCAAGGATGCTACTCCTTCTGGGATTTTAGATAGTGTTGTTAAGGGCTTCATGGGTGGTAAAGTGGAAAACGATGTGAACCCTTTTGGCCGATGTAAACTGAATGATGCACACCTGGACAGTTTGTTCTCATATCCTCCATTTTTAAAGCCCTCCAAAGGTGTCCCCGATGGGGAAGGCGTTATCGAGCTTGATATAGGTTCTCTTCTTGTGCTTTTATCGTACTCCTTCAGTACCTTTGTATCCTCTTTCTGAATTTGCATTTTGTTTCTGATGCAGATGATATTAATATTGATGAACCTTTAGTTGTGCGGTTTTCACCTAAGACAAGCAAGAATGAAAACGAAGGTATTGTTACTCTCATCTGCTGGTAGTTTCTTGATTTCTATTACATTTTACACTTATATTTCGACATTGATGAAGGCAAGAGATCAGAGAAGGAAAAGTTATTTGAAGGTGCTAGTATTGACTCACAACCTAAGATGAGGACAGCTGAAGAAATTAAGGCCAAATACAGAAAAGTTGGGGTATTAGTTATTGATGATTTGGAATTGTTTTTACCTTTCTCTAGTGAATCATAAATGTTCTCTGACTGCCAAAAGTCTTTCCAGAGTGCTTCTGCGGCAGCTGAAGAAGCCAGGAATAAGCTATTAGAACGCCAGCAAAAGCTTGATGTATGACTTTTTTTATTAGTGCCTTATTTTATTTTTACATCTTTCAATGCACATAATAGGTTTTGGTTGCACATGAGATACGAATATCACAAAATGCTGTTGAATTGAGTGATATATCGATTATTAACTGTTAGGTGTCAACTTTCAGATAGGGAAATATTGGAATTCGAAGCCTAACTTAAAGAAATTTAGATTCTTATAGCAAACTTGCGTTTGCTCCATGATTATTCTCAACTTTGGACTTCTGAAACAACTTAATGTAGCCATAGCCAACAGCAAAACACGTTAGGATAATCAATCACCACCATTGAACTAAAAAAATCATATCCAAACTTACCTTTGTTGTTTCTGTCCCTATTTCTGTAACTATAGTCCAGTTTGATTTGTCAAAACCATATATGAGATAGTCTACTATTCATTTAGTGCGGAATTCTAAGCATTCAGGATATCATATGAATTATTTTAGGGGAAAGGTAGACGAGTTTATGAAATAAAAAAGAAGAAAAAAGAAGCTAAATTACGGTTGCCAAGAACTGGAAACACATTGGTCTTTGATAGGAATGTTATTAGGATGAAATTAGGAATATTAATAAGGTATTAAGGATATGCTAGAAATTGGCTAATGAATTTGTGGAAAAGGATGAAGGTAGTCAATTGTTAGTTGATTTGGGCTTGAGTGATATCTCAAGTGGGGAGGTTCCAAGTATCATGGATGCTTGGAGAAGTATATAGGATGAAATTAGAAATATTATTAGAGTATTAAAGATATATTAGTAATCAGTTACGTTAAGGAAGTTGTCGTGATTTATTAAAAATAGAGGGATTATTAAAGGATGAAAGCACACATTAGTTTAGCTGGCTTAGGCATGAGTGACATTGCTCAAGCAGGACTGAGGGAAGACCCAAGTACTTCAAATTACTAGTTCTTTATCTTATATATTTAAATTTCATTCTAGTTGTTTCGATTCTATATGAATATGTCACAGATATTTTGGAAAACAATAATATCTGCAAAGCCAATAAAGAATCCGCCATACAATCAATGCAACCTCTTACTTTTCTTGTTGAATTGATACCAGAAACTCAGCGAACGAACTGAAGAACTGAAGAATGGAGCTGAGAACTTTGCAGATATGGCCAAAGAACTGGCCAAGAGAATGGAGAATCGTAAATGGTGGCAACTGTGAGATAACAGGGATTTGGACTTGGAAAGCAAGAATAAAGTTCTGGTTTCTTGCTAATATTGAACCAGCTTGTTGCATTCTCTGAAATGACAAATCTATAATCTGCCAAACGGTTCAACTAAAGTTTCACATCTGCATTGTGGCATCTTCTCTCTTCCAAATTGGTATATATTATATGCACACACAAAGGTCTTCTGTACACATTCTTTGTTTTTTAAGGAACATAGATGCATTGTCATTCATCTGTGAGGTAAACAAACATCTGAATTATAGGATGGGAAAAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGATAACAAAGATAGTCTTGTTCCCCTTCCAGTGGATATATAAATGTAATTTATCTTTGAGTTTGTATGAAAACAAATCTGTATAGTACTTCTTTGATTATTGATGAAAATATAAATTTTATTTGACTCGACTTTGAGATTGTTTGGGTG

mRNA sequence

ATGTTAAATGGGACTGAGTTTGCGGTTGTGTCTCTATTGATCTACGAAAATGCTTTCAGGATTCCCGAGTCTCTGTCTTGCCTCCACGATAAAGTCCTTGCAGCTGCTGCAGAGGCCTCAGATTTCTTTTATCCAAACCAGAACAAACATGATGCTACTCCTTCTGGGATTTTAGATAGTGTTGTTAAGGGCTTCATGGGTGGTAAAGTGGAAAACGATGTGAACCCTTTTGGCCGATGTAAACTGAATGATGCACACCTGGACAGTTTGTTCTCATATCCTCCATTTTTAAAGCCCTCCAAAGGTGTCCCCGATGGGGAAGGCGTTATCGAGCTTGATATAGATGATATTAATATTGATGAACCTTTAGTTGTGCGGTTTTCACCTAAGACAAGCAAGAATGAAAACGAAGGCAAGAGATCAGAGAAGGAAAAGTTATTTGAAGGTGCTAGTATTGACTCACAACCTAAGATGAGGACAGCTGAAGAAATTAAGGCCAAATACAGAAAAGTTGGGAGTGCTTCTGCGGCAGCTGAAGAAGCCAGGAATAAGCTATTAGAACGCCAGCAAAAGCTTGATAAACTCAGCGAACGAACTGAAGAACTGAAGAATGGAGCTGAGAACTTTGCAGATATGGCCAAAGAACTGGCCAAGAGAATGGAGAATCGTAAATGGTGGCAACTGTGAGATAACAGGGATTTGGACTTGGAAAGCAAGAATAAAGTTCTGGTTTCTTGCTAATATTGAACCAGCTTGTTGCATTCTCTGAAATGACAAATCTATAATCTGCCAAACGGTTCAACTAAAGTTTCACATCTGCATTGTGGCATCTTCTCTCTTCCAAATTGGTATATATTATATGCACACACAAAGGTCTTCTGTACACATTCTTTGTTTTTTAAGGAACATAGATGCATTGTCATTCATCTGTGAGGTAAACAAACATCTGAATTATAGGATGGGAAAAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGATAACAAAGATAGTCTTGTTCCCCTTCCAGTGGATATATAAATGTAATTTATCTTTGAGTTTGTATGAAAACAAATCTGTATAGTACTTCTTTGATTATTGATGAAAATATAAATTTTATTTGACTCGACTTTGAGATTGTTTGGGTG

Coding sequence (CDS)

ATGTTAAATGGGACTGAGTTTGCGGTTGTGTCTCTATTGATCTACGAAAATGCTTTCAGGATTCCCGAGTCTCTGTCTTGCCTCCACGATAAAGTCCTTGCAGCTGCTGCAGAGGCCTCAGATTTCTTTTATCCAAACCAGAACAAACATGATGCTACTCCTTCTGGGATTTTAGATAGTGTTGTTAAGGGCTTCATGGGTGGTAAAGTGGAAAACGATGTGAACCCTTTTGGCCGATGTAAACTGAATGATGCACACCTGGACAGTTTGTTCTCATATCCTCCATTTTTAAAGCCCTCCAAAGGTGTCCCCGATGGGGAAGGCGTTATCGAGCTTGATATAGATGATATTAATATTGATGAACCTTTAGTTGTGCGGTTTTCACCTAAGACAAGCAAGAATGAAAACGAAGGCAAGAGATCAGAGAAGGAAAAGTTATTTGAAGGTGCTAGTATTGACTCACAACCTAAGATGAGGACAGCTGAAGAAATTAAGGCCAAATACAGAAAAGTTGGGAGTGCTTCTGCGGCAGCTGAAGAAGCCAGGAATAAGCTATTAGAACGCCAGCAAAAGCTTGATAAACTCAGCGAACGAACTGAAGAACTGAAGAATGGAGCTGAGAACTTTGCAGATATGGCCAAAGAACTGGCCAAGAGAATGGAGAATCGTAAATGGTGGCAACTGTGA

Protein sequence

MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDSVVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINIDEPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEEARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Homology
[Close]
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match: A0A0A0KM47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G208460 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.4e-108
Identity = 206/228 (90.35%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE  D FY +QN H+AT SGI DS
Sbjct: 880  LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVWDNFYSSQNNHNATSSGIFDS 939

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGF GGKV NDV+ FG CKLNDAHL+SL+SYPPFLKPSKGV DG+GV+ELDIDDINID
Sbjct: 940  VVKGFKGGKVGNDVDRFGLCKLNDAHLESLYSYPPFLKPSKGVIDGQGVVELDIDDINID 999

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPK SKNENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 1000 EPLVVRFSPKASKNENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 1059

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1060 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 1107

[Close]
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match: A0A1S3CND2 (uncharacterized protein LOC103502872 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502872 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-107
Identity = 204/228 (89.47%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1   MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
           +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE SD FYP+QNKH+AT SGI DS
Sbjct: 743 LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVSDNFYPSQNKHNATSSGIFDS 802

Query: 61  VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
           VVKGF GGKVEN V+PF  CKLN AHL+SL+SYPPFLKPSKGV DG+ V+ELDIDDINID
Sbjct: 803 VVKGFKGGKVENVVDPFCLCKLNGAHLESLYSYPPFLKPSKGVIDGQDVVELDIDDINID 862

Query: 121 EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
           EPLVVRFSPK  +NENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 863 EPLVVRFSPKAIENENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 922

Query: 181 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
           ARNKLLERQQKLDKLS+RTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 923 ARNKLLERQQKLDKLSDRTEELKNGAENFADMAKELAKRMENRKWWQL 970

[Close]
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match: A0A5D3CRA9 (Lethal(2) giant larvae protein-like protein SRO77 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001440 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-107
Identity = 204/228 (89.47%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE SD FYP+QNKH+AT SGI DS
Sbjct: 877  LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVSDNFYPSQNKHNATSSGIFDS 936

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGF GGKVEN V+PF  CKLN AHL+SL+SYPPFLKPSKGV DG+ V+ELDIDDINID
Sbjct: 937  VVKGFKGGKVENVVDPFCLCKLNGAHLESLYSYPPFLKPSKGVIDGQDVVELDIDDINID 996

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPK  +NENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 997  EPLVVRFSPKAIENENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 1056

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLS+RTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1057 ARNKLLERQQKLDKLSDRTEELKNGAENFADMAKELAKRMENRKWWQL 1104

[Close]
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match: A0A5A7UAD3 (Lethal(2) giant larvae protein-like protein SRO77 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1184G00190 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-107
Identity = 204/228 (89.47%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE SD FYP+QNKH+AT SGI DS
Sbjct: 890  LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVSDNFYPSQNKHNATSSGIFDS 949

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGF GGKVEN V+PF  CKLN AHL+SL+SYPPFLKPSKGV DG+ V+ELDIDDINID
Sbjct: 950  VVKGFKGGKVENVVDPFCLCKLNGAHLESLYSYPPFLKPSKGVIDGQDVVELDIDDINID 1009

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPK  +NENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 1010 EPLVVRFSPKAIENENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 1069

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLS+RTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1070 ARNKLLERQQKLDKLSDRTEELKNGAENFADMAKELAKRMENRKWWQL 1117

[Close]
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match: A0A1S3CND9 (lethal(2) giant larvae protein homolog SRO77 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502872 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.9e-107
Identity = 204/228 (89.47%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE SD FYP+QNKH+AT SGI DS
Sbjct: 871  LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVSDNFYPSQNKHNATSSGIFDS 930

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGF GGKVEN V+PF  CKLN AHL+SL+SYPPFLKPSKGV DG+ V+ELDIDDINID
Sbjct: 931  VVKGFKGGKVENVVDPFCLCKLNGAHLESLYSYPPFLKPSKGVIDGQDVVELDIDDINID 990

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPK  +NENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 991  EPLVVRFSPKAIENENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 1050

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLS+RTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1051 ARNKLLERQQKLDKLSDRTEELKNGAENFADMAKELAKRMENRKWWQL 1098

[Close]
BLAST of Lsi04G009880 vs. NCBI nr
Match: XP_038892132.1 (uncharacterized protein LOC120081378 isoform X3 [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.3e-109
Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESL+CLHDKVLAAAAE SD FYP+QNKH++TP GIL S
Sbjct: 869  LLNGTEFAVVSLLIYENAFRIPESLACLHDKVLAAAAEVSDNFYPSQNKHNSTP-GILGS 928

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGFMGGKVE+DV+PFG CKLNDAHL+SLFSYPPFLKPSKGV DGE +IELDIDDI ID
Sbjct: 929  VVKGFMGGKVEHDVDPFGLCKLNDAHLESLFSYPPFLKPSKGVTDGEDIIELDIDDIKID 988

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPKTSKNENEGKRSEKEKLFE AS DSQPKMRTAEEIKAKYRKVGS SAAAEE
Sbjct: 989  EPLVVRFSPKTSKNENEGKRSEKEKLFEDASTDSQPKMRTAEEIKAKYRKVGSTSAAAEE 1048

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1049 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 1095

[Close]
BLAST of Lsi04G009880 vs. NCBI nr
Match: XP_038892131.1 (uncharacterized protein LOC120081378 isoform X2 [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.3e-109
Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESL+CLHDKVLAAAAE SD FYP+QNKH++TP GIL S
Sbjct: 873  LLNGTEFAVVSLLIYENAFRIPESLACLHDKVLAAAAEVSDNFYPSQNKHNSTP-GILGS 932

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGFMGGKVE+DV+PFG CKLNDAHL+SLFSYPPFLKPSKGV DGE +IELDIDDI ID
Sbjct: 933  VVKGFMGGKVEHDVDPFGLCKLNDAHLESLFSYPPFLKPSKGVTDGEDIIELDIDDIKID 992

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPKTSKNENEGKRSEKEKLFE AS DSQPKMRTAEEIKAKYRKVGS SAAAEE
Sbjct: 993  EPLVVRFSPKTSKNENEGKRSEKEKLFEDASTDSQPKMRTAEEIKAKYRKVGSTSAAAEE 1052

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1053 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 1099

[Close]
BLAST of Lsi04G009880 vs. NCBI nr
Match: XP_038892130.1 (uncharacterized protein LOC120081378 isoform X1 [Benincasa hispida])

HSP 1 Score: 404.4 bits (1038), Expect = 6.3e-109
Identity = 208/228 (91.23%), Postives = 217/228 (95.18%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESL+CLHDKVLAAAAE SD FYP+QNKH++TP GIL S
Sbjct: 879  LLNGTEFAVVSLLIYENAFRIPESLACLHDKVLAAAAEVSDNFYPSQNKHNSTP-GILGS 938

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGFMGGKVE+DV+PFG CKLNDAHL+SLFSYPPFLKPSKGV DGE +IELDIDDI ID
Sbjct: 939  VVKGFMGGKVEHDVDPFGLCKLNDAHLESLFSYPPFLKPSKGVTDGEDIIELDIDDIKID 998

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPKTSKNENEGKRSEKEKLFE AS DSQPKMRTAEEIKAKYRKVGS SAAAEE
Sbjct: 999  EPLVVRFSPKTSKNENEGKRSEKEKLFEDASTDSQPKMRTAEEIKAKYRKVGSTSAAAEE 1058

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1059 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 1105

[Close]
BLAST of Lsi04G009880 vs. NCBI nr
Match: XP_011654995.1 (uncharacterized protein LOC101208658 isoform X3 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 9.1e-108
Identity = 206/228 (90.35%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1   MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
           +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE  D FY +QN H+AT SGI DS
Sbjct: 742 LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVWDNFYSSQNNHNATSSGIFDS 801

Query: 61  VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
           VVKGF GGKV NDV+ FG CKLNDAHL+SL+SYPPFLKPSKGV DG+GV+ELDIDDINID
Sbjct: 802 VVKGFKGGKVGNDVDRFGLCKLNDAHLESLYSYPPFLKPSKGVIDGQGVVELDIDDINID 861

Query: 121 EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
           EPLVVRFSPK SKNENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 862 EPLVVRFSPKASKNENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 921

Query: 181 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
           ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 922 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 969

[Close]
BLAST of Lsi04G009880 vs. NCBI nr
Match: XP_011654994.1 (uncharacterized protein LOC101208658 isoform X2 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 9.1e-108
Identity = 206/228 (90.35%), Postives = 214/228 (93.86%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEASDFFYPNQNKHDATPSGILDS 60
            +LNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAE  D FY +QN H+AT SGI DS
Sbjct: 872  LLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEVWDNFYSSQNNHNATSSGIFDS 931

Query: 61   VVKGFMGGKVENDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDINID 120
            VVKGF GGKV NDV+ FG CKLNDAHL+SL+SYPPFLKPSKGV DG+GV+ELDIDDINID
Sbjct: 932  VVKGFKGGKVGNDVDRFGLCKLNDAHLESLYSYPPFLKPSKGVIDGQGVVELDIDDINID 991

Query: 121  EPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAAAEE 180
            EPLVVRFSPK SKNENEGKRSEKEKLFEGAS DSQPKMRTAEEIKAKYRKVGSASAAAEE
Sbjct: 992  EPLVVRFSPKASKNENEGKRSEKEKLFEGASTDSQPKMRTAEEIKAKYRKVGSASAAAEE 1051

Query: 181  ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL
Sbjct: 1052 ARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 1099

[Close]
BLAST of Lsi04G009880 vs. TAIR 10
Match: AT5G05570.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-54
Identity = 113/231 (48.92%), Postives = 158/231 (68.40%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEAS-DFFYPNQNKHDATPSGILD 60
            ++NG E A++S L + N FR+PESL  LHDKVLAAAA+A+      ++  HD  P   L 
Sbjct: 902  LVNGCEVAILSFLAHANGFRLPESLPLLHDKVLAAAADATFSHISVHKKNHDGAPK-FLS 961

Query: 61   SVVKGFMGGKVE--NDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDI 120
            +++KGF     +  + V  F       +HL ++FS PP+LKPS    D E ++EL+IDDI
Sbjct: 962  NIIKGFRSSTEQKMDQVQDF-------SHLGNIFSNPPYLKPSDTGGDDEKIVELNIDDI 1021

Query: 121  NIDEPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAA 180
             IDEP+++    +  K E + KR++KEKLF+GAS D+QPK RT +EIK+KYRK G  SA 
Sbjct: 1022 EIDEPVIILPLTEKDKKEKKDKRTDKEKLFDGASSDAQPKTRTVDEIKSKYRKAGETSAI 1081

Query: 181  AEEARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            A +A++KL ER +KL+++S+RT EL++ AENFA MA ELAK+ME RKWW +
Sbjct: 1082 ASQAKDKLHERGEKLERISQRTAELQDNAENFASMAHELAKQMEKRKWWNI 1124

[Close]
BLAST of Lsi04G009880 vs. TAIR 10
Match: AT5G05570.2 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-54
Identity = 113/231 (48.92%), Postives = 158/231 (68.40%), Query Frame = 0 

Query: 1    MLNGTEFAVVSLLIYENAFRIPESLSCLHDKVLAAAAEAS-DFFYPNQNKHDATPSGILD 60
            ++NG E A++S L + N FR+PESL  LHDKVLAAAA+A+      ++  HD  P   L 
Sbjct: 877  LVNGCEVAILSFLAHANGFRLPESLPLLHDKVLAAAADATFSHISVHKKNHDGAPK-FLS 936

Query: 61   SVVKGFMGGKVE--NDVNPFGRCKLNDAHLDSLFSYPPFLKPSKGVPDGEGVIELDIDDI 120
            +++KGF     +  + V  F       +HL ++FS PP+LKPS    D E ++EL+IDDI
Sbjct: 937  NIIKGFRSSTEQKMDQVQDF-------SHLGNIFSNPPYLKPSDTGGDDEKIVELNIDDI 996

Query: 121  NIDEPLVVRFSPKTSKNENEGKRSEKEKLFEGASIDSQPKMRTAEEIKAKYRKVGSASAA 180
             IDEP+++    +  K E + KR++KEKLF+GAS D+QPK RT +EIK+KYRK G  SA 
Sbjct: 997  EIDEPVIILPLTEKDKKEKKDKRTDKEKLFDGASSDAQPKTRTVDEIKSKYRKAGETSAI 1056

Query: 181  AEEARNKLLERQQKLDKLSERTEELKNGAENFADMAKELAKRMENRKWWQL 229
            A +A++KL ER +KL+++S+RT EL++ AENFA MA ELAK+ME RKWW +
Sbjct: 1057 ASQAKDKLHERGEKLERISQRTAELQDNAENFASMAHELAKQMEKRKWWNI 1099

The following BLAST results are available for this feature:
BLAST of Lsi04G009880 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi04G009880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM474.4e-10890.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G208460 PE=4 SV=1[more]
A0A1S3CND24.9e-10789.47uncharacterized protein LOC103502872 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CRA94.9e-10789.47Lethal(2) giant larvae protein-like protein SRO77 isoform X2 OS=Cucumis melo var... [more]
A0A5A7UAD34.9e-10789.47Lethal(2) giant larvae protein-like protein SRO77 isoform X2 OS=Cucumis melo var... [more]
A0A1S3CND94.9e-10789.47lethal(2) giant larvae protein homolog SRO77 isoform X2 OS=Cucumis melo OX=3656 ... [more]
BLAST of Lsi04G009880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038892132.16.3e-10991.23uncharacterized protein LOC120081378 isoform X3 [Benincasa hispida][more]
XP_038892131.16.3e-10991.23uncharacterized protein LOC120081378 isoform X2 [Benincasa hispida][more]
XP_038892130.16.3e-10991.23uncharacterized protein LOC120081378 isoform X1 [Benincasa hispida][more]
XP_011654995.19.1e-10890.35uncharacterized protein LOC101208658 isoform X3 [Cucumis sativus][more]
XP_011654994.19.1e-10890.35uncharacterized protein LOC101208658 isoform X2 [Cucumis sativus][more]
BLAST of Lsi04G009880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G05570.13.6e-5448.92transducin family protein / WD-40 repeat family protein [more]
AT5G05570.23.6e-5448.92transducin family protein / WD-40 repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198
NoneNo IPR availableGENE3D1.20.5.110coord: 159..220
e-value: 6.3E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR10241LETHAL 2 GIANT LARVAE PROTEINcoord: 1..227
NoneNo IPR availablePANTHERPTHR10241:SF38TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEINcoord: 1..227
NoneNo IPR availableCDDcd15873R-SNARE_STXBP5_6coord: 164..221
e-value: 1.7394E-14
score: 63.8148
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 164..220
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 176..224
e-value: 1.9E-8
score: 34.0
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 163..227
score: 11.504242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G009880.1Lsi04G009880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0017157 regulation of exocytosis
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0045159 myosin II binding
molecular_function GO:0019905 syntaxin binding