Lsi04G009510 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009510
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Proliferating cell nuclear antigen
Location	chr04: 9861140 .. 9868810 (-)
RNA-Seq Expression	Lsi04G009510
Synteny	Lsi04G009510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTGTGCTCAATAACAGCAGGATCAACCGTCCACCTACTCTAATTTCATTTTTAGCTTTTCTCATTGAGGCCCTTTTGTGAAACCACCTAGAATTTTGATCTCCCAAACGAAGCCAATCCTCCCTGGCCCTTTGTTTCCAATAAACCTCCTCAACTTCCAATAGTTTGTCAAGTTCAAATTCAATCTCATGGATTTTACTGAAGTCTGTATTTGGCAAAAAGTTGTACGCATTCTGAAGAGCACTTTTACATTTTGCAATCTTATTCTTGATATCTCTATTAACATTCTTGCCCCAACTGCTGAGAGCACCAGCACAAGAAAGTAAATTCTTATGTAATGTAGGACCTCCAACCGAGACTTGATCCCAAGATCCATTCTGCTTAATAATTTCTTTGCATTCATCATAAACAGTCTAACACTCTTCAAAACGAAAAGGATGTCTTTTACCTCTCTGCCCTGGGAAGTTTTTAGAATTGGATGAAAATTCAATGGGGCGATGATCAGAGGTGGACCAGTCAAGATGAGAAACAAGACCAGTTTCAAAGATATTTTCAAAAGCAGAATTACACAAGAAGCGATCAAGTCGGGAGATAATTTTATTTTATTTTATTTTTAATTTCAAAATTATGTCATTACGTTTTATTTTAAATGTATTTAACGAACCTATTAAGCTATTACTAAAACTTTAGAGATCTTAAACATATTTTTCTCTTCTAAGAAAAATGGTTGGAAATTAATTATGAACTAATTAAGAGTTAAAAGTTTCAAAACTATAATTTAGTCATTATAATTCAGACACTAGTCCACTCCCAAGCTCGTCAAATGACTCAAAACATAACCATGCCGAGACGAGAGAAGACTTGAGGCTACATTAGAAATACAAATACAAAGAGACAAAAACGACACGTCGTTACTCTGCAGAATGCCGATGGTGGAGCTCCAGTACTGAAAAAGTTGAAGAAGAAAGTCGCACCGGGACGGAGTAAAGTTTAAGCAAGCAATGTGTGTCTTTCCGGCAAAGATATTTTCTCGGATCCCTTTTCACTTTATCTCCTTTTTTTCTCTATAAAGAAAATCGACGCTGTGAATAATATATCCTAAATTATTTGCTTCTGCCTTTCGCTTTATCTTTCATTTCATTATCTTTTTTCTTCCCTGCTCCACTTGCTATAACCAAATACATTCGCTGCATTTTGTTACTTTCATGATTTGAGAGGTACCCATCTTCGATTTCGATTGCATTTCAGCTTTCATCAAGATCTTGTTCCTTCAGCTTTTTGGGTTTATCAATTTATCTGGGTTTGATCCTTTTAGCTCATCGACTTGATTTTCTGAGAATCCCAGATCATTGGTTGCAGTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTTCTTCTGAATTTGATTCTGGGTTTTTGTGTTTTGATTGTGTTTGATGAAATGACAATAGGAGAAGGGAGTTTGTTTGATCCGGATAGCTTGGTGACTTTAAATTGGAGGAGATTCTGGTTGGTTGAGAATAGTCAGATCTACTCTAAGGCTTTTTAGCTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAGACTGTGTATCCTGTAGATGAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGGTACATCACTATATTTTCAGGACTCATTGGTAGCTTCTCTTTTATGTTATCCATAATCTTTAAATGTTTTGCCTCACTTGAACTTGAAAAGGAATAGAGAAAGTTGGAGGATCTTTAAGTTAAAAAATTATAGGGAGTATATGAGGAACTGTTTTCAAAACAACAATAATTAAGGACAATGTTTTGTTAACTGTTTTTATTATCATCATTGTTTAGTTTCTATCCTACGGATAAGTTTTTCTGAACAATTAAAGTTGTTTTTTTCTCCCACATTAATCTTAAACTTAAAAGCCATCCATCTAGTTAAAGAAAACCAAAACAGAAGAACAGCCTCCCCAACTAGCCCTTGGTTTCATTTATTATCTCTCCTCTCCCATAGCCATTGTTTATAGAACTGCTCTGTCTCTGTCTTTCTTCTTTGGAGGGTTTGCATGAACAATTAAAGTGAGTACTGTGTGGCGTTTGAAAGGTAAACAGGTAAAAACTAAGTTCCAGCTTATGTATACATGATTACTGAGCATTTTTTTTTCGGGTCAGAATGTGAGACGAGCTTTTCTAAAATGATTTTTTAAATGCTTTCAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTTTCTCGTATGCTTCAAACTTTGTCCAATATAGAAGACACTCTACAGCTGATCTTGTAGCTACATTATTGATCTTGTAGCTATTGCTTTTTACTAACATCTTCTATACTTTTCTTTTTCTACAGCTGCAAAATCCTCCGAGAAGCCAATTCCAGAGCTGGTAAATTTAGACCCAATGCTGCAAATAGTTGTGTTTAAATATATAAACAGTCTGCTCATCCGGTAGCCTCTTGTTGGTTCCAGACTAGGTCACCAAGCAAAGCTGCCAGCATGTTTTCTGGAACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCCCTGGAGAAGGTTAGTTTAAAAAGCATTTAGAAAGATATTCAGACATTTAAAACCTGCTTAATCACACCAATAGTCAAATTTCACTCTCTTTTCGAACCGTCTGATTCACTGAATTATCTTTCCGTGGTCGTTTGAACTTGTTTTGCATACCATTGTTTCGGCATTTACATATTGACCTCTATAAGAAAGGGATATTCCTCAAAGCTACTACATCTAAATGAGTTGGTTTTCTGAACGGCTTGAATAGGGCTCTTGTTTAAGCCAATTAGTGAACTGATGATCTGTAGGCTTTTAAGGAACTGTTGTTAATTTGCTTAATAGTATTTCCTGCCGAGGTAGAAATGGTTCCATCCCAAGTTTCAAGTAGTTTTGCTGGTGTTGGTACTTTGTATGCATTGGTGCAGATGTTATTTTATCGGTAATGGATCGTGGGAATTGCTTGTATGCAGGTGACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCGATGAAGCGTCAAGCAGCAACCTCCGATCCGGATCCTTCAAAGGTCGAGTCATAAACTTCCAATTTGTGGTTTTGTTGAGTCCATTTTCCCTCTGCTTTCCTCCCTTCCTCAGTGTGTTCTACTTTGATCCTCACAATTTTGTGATGGGAAACAAAAAAGGAAACTTGCACGAGTCTCCAGCTCGTCATGTTGAGCCAAATTGTTTGTTTGCTTGATTCATGGAACTTCAAACAAACCATTTGAAATTGGGCAATGATTTGCTAAACTTTATGAAAGCATTTTGCAACATTTAGTTTTGGGTTACCAGAAGATAGAAATGGATTCTTTCTGTTCCCTGCTGAATTCCTCTATGTTTTCATATTGACAAGTACTTCAAGTGGTTTAGAAAACTTCTCTCTCATCTTGATATCAGTTGGAAATGACCTAAATCATAGGCTGCATAGCTATCTTTTATATGCTTTTTTGGTTGTGAAAGGCAATATTGGAGGATCTAACTTGCCTTGCTGCCCCCCTGAAGAATGGTAAAAACCAATTATTTTTTCTATAATCAATCATACACATGGGATGGGGCAGTCATTGGAAAAAAAAACATTTGTGGGGTGAGATCAAACCGTCAATCTTTATGAATACATGGTGGTAAGGGCCATAGTGAGATCGATATCAGGTGGGAAGTTTTCGTAGATCCAACCTCTAAATAAAAGGATTTACAAACCATTTGATATGTTTTTACTTTGATTAAATTACAAGTTTAGTCCATGAACTTTGAGATTTGTATCTATTTGGTCCTTGAACTTTTAAAAGTGCTTATCATATCCCTAAACTTGTCATTTTATGTCTAATAGATGCCTTGAACTTTCATTTTTGTGTTTAATAGGTCTTTACAAATTTGATTTTTTCTAAATAAAAAATAATCGATATATTAATATAAATTTGAATGGTATATTTAATGGAACTTTACTTTTATTTTTGTCTATCAGATCCATAAAATTTAAAATTTTTGAAAATTTGGAGATTAAATTTATAATTTTAAAAATTTAAGAACTAAATAGAAGCAATTCGAAATAAACATGTAATTTAATCTTTGACTTTTTTTATCTGTGTATTTTTTATATTGTAGATTCAAATTCTCTCACACACAGTAAAAAAAACACCTTAGTTGGGATTTCAAAAGTGTTCAATAGTGCTACTAAGAAGTGATTTTTTTAGGAATAAGAGTGAATATCTAAATAAAGAAAAGTAAGTGCATATTATAAACTTAATTTTTAATGACTGAAATTAAAAATAAGATTCTAATGTTTAAAACTCAATTCCGTATTCATACTTTAAAATATGTTTTATTTTGGAACCTATAAATGTCTATTTTAATTTTAATTTGATTTTTGAACTTTCACAAGTGTTTATTTTAGTCTATAAAATTTTAAAAATAATTATTTCACTTATTTTCTTATTACTACGTGATTCAATTATATATATTAATGTGAGTATGTAATGAAACATGCTATAGGTTTTTAATTCATAACTTAAAAGACAAACATTTATTGAGTGTAAGAACTATAATGATATTTTTGGCCAGGGTGGTTCATTACTTTACTCGTTCTTTGATATGCGTTGGTTCTAAAGTGATCAAGAAGAAAAGTATGATTCATGTTATGGAGAGTTGTCTTTCATTGAACAAAACAAAACATTAAGGGTAAGTTTGAAATTTTGAAAATATAAAGTTACGTTTGGTAATTATTTGATTTTTTATTTTTTATTTTTAAAAATTAAGTCTATTTTCTCTCTATATTTAATCATGGTTTTCATCTTTCTTAAGTGAATGAGGCTAATTATTAGCCAAATTCCAAAAAAAAAAATGTTAAAAACTATTTTTTTTTCTTTTTTAAGTTTTCAAAATTTATCTTGGTTTTTTGATACAGTGGTAGAAAGTAGATAGACCGCGATAGAATTCTATCGCGGTCTATTATTGTAAACAGTAAAAATTTTATAAATTTGTAAATAATTTAATATTTTTTCTGTTTATAGTAATTTTCCTTCCAAATTATGTCTTAATGATTGAATTGAGAATTGCATTAATTTAATAAGTTGTCGGGTAATTGTTTTAAAGACAAAATTGTTAAAAATATTTTTAAATATAACAAAATATCACTGTCTATTAGTGACTATAACTGATAGACAGTGACATTTTATTATATTTGTAAATAAGTTGGCTCGTTTAACTATATTTAAAAATAATTCATAAATGTTACTATCTATTAGTGATAGATAGTAACATTTTGCTAGATATATAAATAAGTGGACTCATTTTCCTATATTTCAAAACATGTATAATTTGTCCCATAAAAAGATTAAAAAAATAAAAATAAAAATGAAGAAATACGAAACGACGTCGTAGCTGATCTGGCGGGAATTCCAGTCCCCACTCCCGCCCAAGCTGGGGTCTCTCCGTCTCCGGTTCCATCCGTTATATGTCTCAGAATTTCATTTCTTTTTCATAAGAGAAACCCAAGAAACAGCCCTTAACTCTCAGTCTCACAAAACCCACAAAAATGTTGGAGCTCCGTCTAGTTCAGGGGAGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGACCTCGTCAACGACGCCAACTTCGATTGTTCCTCTACTGGTTTCTCCCTTCAAGCTATGGATTCCAGTCACGTCGCTTTAGTCTCTCTCCTTCTCCGCTCTGAGGGTTTCGAGCACTATCGCTGCGATCGCAGCATCTCCATGGGAATGAACCTCAACAACATGGCTAAGATGCTCCGTTGCGCTGGTAACGACGACATTGTTACGCTTAAGGCCGATGATGGTAGCGATTGCGTTACTTTCATGTTTGAAAACCCTTGTGAGTTCACTATCTCCATTTTCCCCACTCTTTTTACTCTATGTAACTAAGAAATGTTATCGGATAGTTGAAGCTGAAATAATTTTCTACTGGTTAGTTAGTAAAGTAGGGTTTAGATTCCATCTATGAGCAATAATGTGTATTTGATGCTGGCTGTTGAGATGGAAAATAGTTATTCTGATTTACTGTTGTTTCTTTCGGCGTTTAGCGCAAGATAAGATTGCTGATTTTGAGATGAAGCTGATGGATATTGATAGCGAGCATCTCGGAATCCCCGATGCTGAATATCAGTCCATTGTTAGAATGCCAGCAACTGAGTTTGCGAGGATTTGCAAGGATCTCAGCACCATTGGGGATACTGGTAATCGTCTGAACATTATGGTTTCTTTTATAAGTGTTATTCTAATTAGCAAAGTTTAATGAATTATCGCTTTGTTCCAGTTCTGATTTCTGTGTCCAAGGACGGAGTTCAATTCTCAACTAGAGGTGATATCGGCACTGCCAATATAGTTTGTAGACGAAATACCACAGTTGACAAGGTCTTTTCCTCAAGCACACTACGAACAACTTGCTAATTCAATTTAATGTTTGATTTTGAATGGTTGAAAGCATGTTTCAAACTGATTTTAAACCTGATAAAAGTGTTGTTCTGTTCTTAAAATAAAATGTTGAGCAATTGTTTTGTTTGATGTCTTCTTTCTTTGTGAATGGAAATTTTACAGCCTGAAGAAGCTGTTACAATAGAGATGGAAGAACCAGTTGGCTTAACCTTTGCCCTGAGGTACCTCAACTCTTTTACAAAGGCAACCCCTCTAGCAAACCAGGTGACGATCAGCATGTCTTCAGATCTGCCTGTGGTGGTTGAATACAGAATTGAAGACATGGGTTATATAAGATACTACTTGGCTCCTAAGATTGAAGAAGAAGATGAAGCTGCAGCTGCAGATGCAGCACAAGCGATTAGGAGAGCAGAGACAGAGCCCAAGCATACACCAAAGCCAAAACCCAAAGCAGACTTGAAGCCGAAAGTCAAGTCTAACACTGAATCAGAGATGAAGTTTGAAGAAGACAAAGGGTCTGTAATTGAGATCAAGGATGAAGACAACAAGTCTGTATTTGTAATCAATGATGAAGAAAAGAACTCTCCAGTTGAAAGCAAGGCAGAAGAGGAAACCAATACTCCCAAGGAACCAAAGATTGAAACAATGGAACTTGAGTGATGACTCTTCATGAGAAATCAATTAGTCAGTTAGTAGGAAATGTTAGCCACTTTCTAACTCCTGTTGGTTAGGTTAGTAGAGAAGAGATGACAAGGAGTGATTTTGTGACATATAAGTAAGAAATAATGGCTATATGTTTCTTTAGATAAATTTTATGTAATTGGGATATCTTGTAAGAATCTGCATTCAGCTAATATTTTGGAGTCAGGATTGGTTTCATTCCATCCAAATCCTGACCATGGAAAGGAGAAATGACAAGTAAATCTGTTTTCTGT

mRNA sequence

ATGAAAAATGCCGATGGTGGAGCTCCAGTACTGAAAAAGTTGAAGAAGAAAGTCGCACCGGGACGGACTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAGACTGTGTATCCTGTAGATGAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTTTCTCCTGCAAAATCCTCCGAGAAGCCAATTCCAGAGCTGTCTGCTCATCCGGTAGCCTCTTGTTGGTTCCAGACTAGGTCACCAAGCAAAGCTGCCAGCATGTTTTCTGGAACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCCCTGGAGAAGGTGACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCGATGAAGCGTCAAGCAGCAACCTCCGATCCGGATCCTTCAAAGGCAATATTGGAGGATCTAACTTGCCTTGCTGCCCCCCTGAAGAATGAGAAACCCAAGAAACAGCCCTTAACTCTCAGTCTCACAAAACCCACAAAAATGTTGGAGCTCCGTCTAGTTCAGGGGAGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGACCTCGTCAACGACGCCAACTTCGATTGTTCCTCTACTGGTTTCTCCCTTCAAGCTATGGATTCCAGTCACGTCGCTTTAGTCTCTCTCCTTCTCCGCTCTGAGGGTTTCGAGCACTATCGCTGCGATCGCAGCATCTCCATGGGAATGAACCTCAACAACATGGCTAAGATGCTCCGTTGCGCTGGTAACGACGACATTGTTACGCTTAAGGCCGATGATGCGCAAGATAAGATTGCTGATTTTGAGATGAAGCTGATGGATATTGATAGCGAGCATCTCGGAATCCCCGATGCTGAATATCAGTCCATTGTTAGAATGCCAGCAACTGAGTTTGCGAGGATTTGCAAGGATCTCAGCACCATTGGGGATACTGGTAATCGTCTGAACATTATGCAAAGTTTAATGAATTATCGCTTTGTTCCAGTTCTGATTTCTGTGTCCAAGGACGGAGTTCAATTCTCAACTAGAGGTGATATCGGCACTGCCAATATAGTTTGTAGACGAAATACCACAGTTGACAAGCCTGAAGAAGCTGTTACAATAGAGATGGAAGAACCAGTTGGCTTAACCTTTGCCCTGAGGTACCTCAACTCTTTTACAAAGGCAACCCCTCTAGCAAACCAGGTGACGATCAGCATGTCTTCAGATCTGCCTGTGGTGGTTGAATACAGAATTGAAGACATGGGTTATATAAGATACTACTTGGCTCCTAAGATTGAAGAAGAAGATGAAGCTGCAGCTGCAGATGCAGCACAAGCGATTAGGAGAGCAGAGACAGAGCCCAAGCATACACCAAAGCCAAAACCCAAAGCAGACTTGAAGCCGAAAGTCAAGTCTAACACTGAATCAGAGATGAAGTTTGAAGAAGACAAAGGGTCTGTAATTGAGATCAAGGATGAAGACAACAAGTCTGTATTTGTAATCAATGATGAAGAAAAGAACTCTCCAGTTGAAAGCAAGGCAGAAGAGGAAACCAATACTCCCAAGGAACCAAAGATTGAAACAATGGAACTTGAGTGATGACTCTTCATGAGAAATCAATTAGTCAGTTAGTAGGAAATGTTAGCCACTTTCTAACTCCTGTTGGTTAGGTTAGTAGAGAAGAGATGACAAGGAGTGATTTTGTGACATATAAGTAAGAAATAATGGCTATATGTTTCTTTAGATAAATTTTATGTAATTGGGATATCTTGTAAGAATCTGCATTCAGCTAATATTTTGGAGTCAGGATTGGTTTCATTCCATCCAAATCCTGACCATGGAAAGGAGAAATGACAAGTAAATCTGTTTTCTGT

Coding sequence (CDS)

ATGAAAAATGCCGATGGTGGAGCTCCAGTACTGAAAAAGTTGAAGAAGAAAGTCGCACCGGGACGGACTATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGAGAAGACTGTGTATCCTGTAGATGAGTTATCTGCTGATGGAGTTGCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGAAGGTGTTCTGTACTGTAAGCCTCATTTTGAGCAGCTCTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTTTCTCCTGCAAAATCCTCCGAGAAGCCAATTCCAGAGCTGTCTGCTCATCCGGTAGCCTCTTGTTGGTTCCAGACTAGGTCACCAAGCAAAGCTGCCAGCATGTTTTCTGGAACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCCCTGGAGAAGGTGACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACACGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTTGATGGAATTTTGTACTGCAAACACCACTTTTCTCAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATCAAATCTGCATCGATGAAGCGTCAAGCAGCAACCTCCGATCCGGATCCTTCAAAGGCAATATTGGAGGATCTAACTTGCCTTGCTGCCCCCCTGAAGAATGAGAAACCCAAGAAACAGCCCTTAACTCTCAGTCTCACAAAACCCACAAAAATGTTGGAGCTCCGTCTAGTTCAGGGGAGTCTTCTGAAGAAGGTTCTTGAAGCCATGAAGGACCTCGTCAACGACGCCAACTTCGATTGTTCCTCTACTGGTTTCTCCCTTCAAGCTATGGATTCCAGTCACGTCGCTTTAGTCTCTCTCCTTCTCCGCTCTGAGGGTTTCGAGCACTATCGCTGCGATCGCAGCATCTCCATGGGAATGAACCTCAACAACATGGCTAAGATGCTCCGTTGCGCTGGTAACGACGACATTGTTACGCTTAAGGCCGATGATGCGCAAGATAAGATTGCTGATTTTGAGATGAAGCTGATGGATATTGATAGCGAGCATCTCGGAATCCCCGATGCTGAATATCAGTCCATTGTTAGAATGCCAGCAACTGAGTTTGCGAGGATTTGCAAGGATCTCAGCACCATTGGGGATACTGGTAATCGTCTGAACATTATGCAAAGTTTAATGAATTATCGCTTTGTTCCAGTTCTGATTTCTGTGTCCAAGGACGGAGTTCAATTCTCAACTAGAGGTGATATCGGCACTGCCAATATAGTTTGTAGACGAAATACCACAGTTGACAAGCCTGAAGAAGCTGTTACAATAGAGATGGAAGAACCAGTTGGCTTAACCTTTGCCCTGAGGTACCTCAACTCTTTTACAAAGGCAACCCCTCTAGCAAACCAGGTGACGATCAGCATGTCTTCAGATCTGCCTGTGGTGGTTGAATACAGAATTGAAGACATGGGTTATATAAGATACTACTTGGCTCCTAAGATTGAAGAAGAAGATGAAGCTGCAGCTGCAGATGCAGCACAAGCGATTAGGAGAGCAGAGACAGAGCCCAAGCATACACCAAAGCCAAAACCCAAAGCAGACTTGAAGCCGAAAGTCAAGTCTAACACTGAATCAGAGATGAAGTTTGAAGAAGACAAAGGGTCTGTAATTGAGATCAAGGATGAAGACAACAAGTCTGTATTTGTAATCAATGATGAAGAAAAGAACTCTCCAGTTGAAAGCAAGGCAGAAGAGGAAACCAATACTCCCAAGGAACCAAAGATTGAAACAATGGAACTTGAGTGA

Protein sequence

MKNADGGAPVLKKLKKKVAPGRTMSFIGTQQKCKACEKTVYPVDELSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFSKNFLSPAKSSEKPIPELSAHPVASCWFQTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKRQAATSDPDPSKAILEDLTCLAAPLKNEKPKKQPLTLSLTKPTKMLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADDAQDKIADFEMKLMDIDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVSKDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKPKPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNTPKEPKIETMELE

Homology

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BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot
Match: O82797 (Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.4e-113
Identity = 213/277 (76.90%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLE++KDLVNDANFDCS+TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ISMGMNL NMAKML+CAGNDDI+TLKADD             QDKIADFEMKLMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIP+AEY +IVRMP+ EF+RICKDLS+IGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FSTRGDIGTANIVCR+NTTVDKPEEA  IEM EPV LTFALRYLNSFTKATPL+N
Sbjct: 181 KEGVKFSTRGDIGTANIVCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE 524
            VTIS+SS+LPVVVEY+I +MGYIR+YLAPKIEE++E
Sbjct: 241 TVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDEE 260

[Close]

BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot
Match: P24314 (Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-112
Identity = 211/277 (76.17%), Postives = 237/277 (85.56%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLE++KDLV DANFDCS++GFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ SMGMNLNNMAKML+CAGNDDI+TLKADD             QDKI+DFEMKLMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIP+AEY +IVRMP+ EFARICKDLS+IGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FSTRGDIGTANIVCR+NTTVDKP+EA  IEM EPV LTFALRYLNSFTKATPL+N
Sbjct: 181 KEGVKFSTRGDIGTANIVCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE 524
            VTIS+SS+LPVVVEY+I +MGYIR+YLAPKIEE+DE
Sbjct: 241 NVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEEDDE 260

[Close]

BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot
Match: Q00265 (Proliferating cell nuclear antigen large form OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.6e-112
Identity = 241/382 (63.09%), Postives = 285/382 (74.61%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQG LLKKVLE++KDLVNDANFDCS++GFSLQAMDSSHVALV++LLRSEGFEHY
Sbjct: 1   MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ISMGMNL NMAKMLRCAGNDDIVT+KADD             QDKI+DFEMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIP++EY++IVRMP+ EFARICKDLSTIGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FSTRGDIGTANIVCR+NT+VDKPE+A  IEM+E V LTFALRY+NSFTKATPLAN
Sbjct: 181 KEGVKFSTRGDIGTANIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA-AADAAQAIRRAETEPKHTPK 558
           QVTIS+SS+LPVVVEY+I +MGYIRYYLAPKIEEEDEAA  A  AQ    A T    T K
Sbjct: 241 QVTISLSSELPVVVEYKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKK 300

Query: 559 PK--PKADLKPK-VKSN--TESEMKFEEDKGSVIEIKDE--DNKSVFVINDEEKNSPVES 618
            +   K D K + +KS    +SE   +    +  + K E  ++  V V++ + KN P + 
Sbjct: 301 NEGNNKVDSKKRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDG 360

[Close]

BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot
Match: Q9M7Q7 (Proliferating cellular nuclear antigen 1 OS=Arabidopsis thaliana OX=3702 GN=PCNA PE=1 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 1.3e-111
Identity = 208/277 (75.09%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLE++KDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR++SMGMNL NM+KML+CAGNDDI+T+KADD             QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEY SIVRMP+ EF+RICKDLS+IGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FST GDIGTANIV R+NTTVDKPE+A+ IEM+EPV L+FALRY+NSFTKATPL++
Sbjct: 181 KEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSD 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE 524
            VTIS+SS+LPVVVEY++ +MGYIRYYLAPKIEEE++
Sbjct: 241 TVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260

[Close]

BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot
Match: Q43124 (Proliferating cell nuclear antigen OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.3e-111
Identity = 209/280 (74.64%), Postives = 238/280 (85.00%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLE++KDLVNDANFDCS+TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADDA------------QDKIADFEMKLMD 378
           RCDR++SMGMNL NM+KML+CAGNDDI+T+KADD             QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPKQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEY SIVRMP+ EF+RICKDLSTIGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSTIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FST GDIGTANIV R+NTTVDKPE+A+ IEM EPV L+FALRY+NSFTKATPL++
Sbjct: 181 KEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSD 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAA 527
            VTIS+SS+LPVVVEY++ +MGYIRYYLAPKIEE++E  A
Sbjct: 241 TVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEDEEDKA 263

[Close]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL
Match: A0A5D3BG12 (Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00950 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-154
Identity = 309/374 (82.62%), Postives = 324/374 (86.63%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRL+QGSLLKKVLEAMKDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ISMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIV+MPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA      AI + ETE KHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA------AISKPETESKHTAKA 300

Query: 559 KPKADLKPKVKSN--TESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEET 618
           KPKADLKPK +++  +ESEMK EEDKGSVIEIKD+DNKSVFVINDEEKNS V+SKA+EET
Sbjct: 301 KPKADLKPKFEAHPESESEMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEET 351

[Close]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL
Match: A0A1S4E4U2 (Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 2.9e-154
Identity = 309/374 (82.62%), Postives = 324/374 (86.63%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRL+QGSLLKKVLEAMKDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ISMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIV+MPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA      AI + ETE KHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA------AISKPETESKHTAKA 300

Query: 559 KPKADLKPKVKSN--TESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEET 618
           KPKADLKPK +++  +ESEMK EEDKGSVIEIKD+DNKSVFVINDEEKNS V+SKA+EET
Sbjct: 301 KPKADLKPKFEAHPESESEMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEET 351

[Close]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL
Match: A0A0A0KSC4 (Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_5G198160 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 2.7e-152
Identity = 305/372 (81.99%), Postives = 319/372 (85.75%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLEA+KDLVNDANFDCSS+GFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR++SMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIV+MPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIE MGYIRYYLAPKIEEEDEAA       I + ETEPKHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDEAA------TISKPETEPKHTAKA 300

Query: 559 KPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNT 618
           KPKADLKP  + N ESEMK EED+GSVIEIKD+D KSVFVINDE +NSPV+SKA EETNT
Sbjct: 301 KPKADLKPNFEPNPESEMKSEEDEGSVIEIKDKD-KSVFVINDEVQNSPVKSKAREETNT 348

[Close]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL
Match: A0A6J1DUY3 (Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC111023729 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148
Identity = 303/374 (81.02%), Postives = 319/374 (85.29%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLEAMKDLVNDANFDCS+TGFSLQAMDSSHVALVSLLLRS+GFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAMKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSDGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+IS+GMNL NMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRNISIGMNLGNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDA+YQSIVRMPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDADYQSIVRMPAAEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIG ANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLA+
Sbjct: 181 KEGVQFSTRGDIGIANIVCRRNTTVDKPEEAVVIEMEEPVSLTFALRYLNSFTKATPLAS 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPK- 558
           QVTIS+SSDLPVV+EYRIEDMGYIRYYLAPKIEEEDEAAA  AA AI R E  PKHT + 
Sbjct: 241 QVTISLSSDLPVVIEYRIEDMGYIRYYLAPKIEEEDEAAA--AAAAISRPEAGPKHTAEA 300

Query: 559 PKPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEE-KNSPVESKAEEET 618
            K KA+ KPK +  +ESEMK EEDKGSVIEIKDE+NKSV VI DEE KNS V SKAEEET
Sbjct: 301 AKRKAESKPKFEPQSESEMKNEEDKGSVIEIKDEENKSVVVIKDEEDKNSSVLSKAEEET 355

[Close]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL
Match: A0A1S3CJ20 (Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-145
Identity = 292/356 (82.02%), Postives = 306/356 (85.96%), Query Frame = 0


Query: 277 MKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRSISMGMNLNNMAKM 336
           MKDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSE FEHYRCDR+ISMGMNLNNMAKM
Sbjct: 1   MKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHYRCDRTISMGMNLNNMAKM 60

Query: 337 LRCAGNDDIVTLKADD------------AQDKIADFEMKLMDIDSEHLGIPDAEYQSIVR 396
           LRCAGNDDIVTLKADD            +QDKIADFEMKLMDIDSEHLGIPDAEYQSIV+
Sbjct: 61  LRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMDIDSEHLGIPDAEYQSIVK 120

Query: 397 MPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVSKDGVQFSTRGDIGTANIV 456
           MPA EFARICKDLS+IGDT                 VLISVSK+GVQFSTRGDIGTANIV
Sbjct: 121 MPAVEFARICKDLSSIGDT-----------------VLISVSKEGVQFSTRGDIGTANIV 180

Query: 457 CRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYRI 516
           CRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYRI
Sbjct: 181 CRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLANQVTISMSSDLPVVVEYRI 240

Query: 517 EDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKPKPKADLKPKVKSN--TES 576
           EDMGYIRYYLAPKIEEEDEAA      AI + ETE KHT K KPKADLKPK +++  +ES
Sbjct: 241 EDMGYIRYYLAPKIEEEDEAA------AISKPETESKHTAKAKPKADLKPKFEAHPESES 300

Query: 577 EMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNTPKEPKIETMELE 619
           EMK EEDKGSVIEIKD+DNKSVFVINDEEKNS V+SKA+EETNTPKEPKIETM+LE
Sbjct: 301 EMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEETNTPKEPKIETMDLE 333

[Close]

BLAST of Lsi04G009510 vs. NCBI nr
Match: XP_038891866.1 (proliferating cell nuclear antigen-like [Benincasa hispida])

HSP 1 Score: 588.6 bits (1516), Expect = 6.4e-164
Identity = 321/372 (86.29%), Postives = 330/372 (88.71%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLE RLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLEFRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDCVTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIVRMPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVRMPAAEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKA+PLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVIIEMEEPVSLTFALRYLNSFTKASPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAA AAQAI R ETEPKHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAAAAAQAINRPETEPKHTAKA 300

Query: 559 KPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNT 618
           KPKADLKPKV+ N ESEMKFEE+ GSVIEIKDEDNK+VFVINDEEKNSP++SKAEEE NT
Sbjct: 301 KPKADLKPKVEPNPESEMKFEEENGSVIEIKDEDNKTVFVINDEEKNSPLKSKAEEENNT 355

[Close]

BLAST of Lsi04G009510 vs. NCBI nr
Match: XP_016902995.1 (PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo] >KAA0037336.1 proliferating cell nuclear antigen-like isoform X1 [Cucumis melo var. makuwa] >TYJ97571.1 proliferating cell nuclear antigen-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 555.4 bits (1430), Expect = 6.0e-154
Identity = 309/374 (82.62%), Postives = 324/374 (86.63%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRL+QGSLLKKVLEAMKDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLLQGSLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSECFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+ISMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRTISMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSLTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIV+MPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA      AI + ETE KHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAA------AISKPETESKHTAKA 300

Query: 559 KPKADLKPKVKSN--TESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEET 618
           KPKADLKPK +++  +ESEMK EEDKGSVIEIKD+DNKSVFVINDEEKNS V+SKA+EET
Sbjct: 301 KPKADLKPKFEAHPESESEMKSEEDKGSVIEIKDKDNKSVFVINDEEKNSSVKSKAQEET 351

[Close]

BLAST of Lsi04G009510 vs. NCBI nr
Match: XP_004150242.1 (proliferating cell nuclear antigen [Cucumis sativus] >KGN50626.1 hypothetical protein Csa_021418 [Cucumis sativus])

HSP 1 Score: 548.9 bits (1413), Expect = 5.6e-152
Identity = 305/372 (81.99%), Postives = 319/372 (85.75%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLEA+KDLVNDANFDCSS+GFSLQAMDSSHVALVSLLLRSE FEHY
Sbjct: 1   MLELRLVQGSLLKKVLEALKDLVNDANFDCSSSGFSLQAMDSSHVALVSLLLRSESFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR++SMGMNLNNMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRTMSMGMNLNNMAKMLRCAGNDDIVTLKADDGSDSVTFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEYQSIV+MPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDAEYQSIVKMPAVEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIGTANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLAN
Sbjct: 181 KEGVQFSTRGDIGTANIVCRRNTTVDKPEEAVMIEMEEPVSLTFALRYLNSFTKATPLAN 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKP 558
           QVTISMSSDLPVVVEYRIE MGYIRYYLAPKIEEEDEAA       I + ETEPKHT K 
Sbjct: 241 QVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDEAA------TISKPETEPKHTAKA 300

Query: 559 KPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNT 618
           KPKADLKP  + N ESEMK EED+GSVIEIKD+D KSVFVINDE +NSPV+SKA EETNT
Sbjct: 301 KPKADLKPNFEPNPESEMKSEEDEGSVIEIKDKD-KSVFVINDEVQNSPVKSKAREETNT 348

[Close]

BLAST of Lsi04G009510 vs. NCBI nr
Match: XP_022156894.1 (proliferating cell nuclear antigen-like [Momordica charantia])

HSP 1 Score: 536.2 bits (1380), Expect = 3.8e-148
Identity = 303/374 (81.02%), Postives = 319/374 (85.29%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLEAMKDLVNDANFDCS+TGFSLQAMDSSHVALVSLLLRS+GFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAMKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSDGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR+IS+GMNL NMAKMLRCAGNDDIVTLKADD            +QDKIADFEMKLMD
Sbjct: 61  RCDRNISIGMNLGNMAKMLRCAGNDDIVTLKADDGSDCITFMFENPSQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDA+YQSIVRMPA EFARICKDLS+IGDT                 VLISVS
Sbjct: 121 IDSEHLGIPDADYQSIVRMPAAEFARICKDLSSIGDT-----------------VLISVS 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GVQFSTRGDIG ANIVCRRNTTVDKPEEAV IEMEEPV LTFALRYLNSFTKATPLA+
Sbjct: 181 KEGVQFSTRGDIGIANIVCRRNTTVDKPEEAVVIEMEEPVSLTFALRYLNSFTKATPLAS 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPK- 558
           QVTIS+SSDLPVV+EYRIEDMGYIRYYLAPKIEEEDEAAA  AA AI R E  PKHT + 
Sbjct: 241 QVTISLSSDLPVVIEYRIEDMGYIRYYLAPKIEEEDEAAA--AAAAISRPEAGPKHTAEA 300

Query: 559 PKPKADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEE-KNSPVESKAEEET 618
            K KA+ KPK +  +ESEMK EEDKGSVIEIKDE+NKSV VI DEE KNS V SKAEEET
Sbjct: 301 AKRKAESKPKFEPQSESEMKNEEDKGSVIEIKDEENKSVVVIKDEEDKNSSVLSKAEEET 355

[Close]

BLAST of Lsi04G009510 vs. NCBI nr
Match: KAG7030688.1 (hypothetical protein SDJN02_04725, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 529.3 bits (1362), Expect = 4.6e-146
Identity = 294/370 (79.46%), Postives = 307/370 (82.97%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRL+QG LLKKVLEAMKDLVNDANFDCS TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLLQGGLLKKVLEAMKDLVNDANFDCSPTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADDAQDKIADFEMKLMDIDSEHLGIPDAE 378
           RCDR++SMGMNLNNMAKMLRCAGNDDIVTLKADDAQDKIADFEMKLMDIDSEHLGIPDAE
Sbjct: 61  RCDRNVSMGMNLNNMAKMLRCAGNDDIVTLKADDAQDKIADFEMKLMDIDSEHLGIPDAE 120

Query: 379 YQSIVRMPATEFARICKDLSTIGDTGNRLNIMQS----------LMNYRFVPVLISVSKD 438
           YQSIVRMPA EFARIC+DLSTIGDTGN LN   S          L N RFV VLISVSK+
Sbjct: 121 YQSIVRMPAAEFARICRDLSTIGDTGNHLNHFVSFRRHYSNIYRLTNNRFVSVLISVSKE 180

Query: 439 GVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLANQV 498
           GVQFSTRGD+GTANIVCRR TTVDKPEE V IEMEEPV LTFALRYLNSFTKATPLA QV
Sbjct: 181 GVQFSTRGDMGTANIVCRRTTTVDKPEEDVIIEMEEPVSLTFALRYLNSFTKATPLATQV 240

Query: 499 TISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDEAAAADAAQAIRRAETEPKHTPKPKP 558
           TISMSSDLP+V+EYRIE MGYIRYYLAPKI+EE+E A   AA+AIRR E EPK+T K KP
Sbjct: 241 TISMSSDLPMVIEYRIEGMGYIRYYLAPKIDEEEEEA---AAEAIRRPEIEPKNTEKAKP 300

Query: 559 KADLKPKVKSNTESEMKFEEDKGSVIEIKDEDNKSVFVINDEEKNSPVESKAEEETNTPK 618
           KADLKPKVK   ESEMK            DEDN+SV   N           AEEETNTPK
Sbjct: 301 KADLKPKVKPKPESEMKI-----------DEDNESVNEFN-----------AEEETNTPK 345

[Close]

BLAST of Lsi04G009510 vs. TAIR 10
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1 )

HSP 1 Score: 405.2 bits (1040), Expect = 9.3e-113
Identity = 208/277 (75.09%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLE++KDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR++SMGMNL NM+KML+CAGNDDI+T+KADD             QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEY SIVRMP+ EF+RICKDLS+IGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FST GDIGTANIV R+NTTVDKPE+A+ IEM+EPV L+FALRY+NSFTKATPL++
Sbjct: 181 KEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSD 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE 524
            VTIS+SS+LPVVVEY++ +MGYIRYYLAPKIEEE++
Sbjct: 241 TVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260

[Close]

BLAST of Lsi04G009510 vs. TAIR 10
Match: AT2G29570.1 (proliferating cell nuclear antigen 2 )

HSP 1 Score: 403.7 bits (1036), Expect = 2.7e-112
Identity = 208/277 (75.09%), Postives = 236/277 (85.20%), Query Frame = 0


Query: 259 MLELRLVQGSLLKKVLEAMKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 318
           MLELRLVQGSLLKKVLEA+KDLVNDANFDCS+TGFSLQAMDSSHVALVSLLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 319 RCDRSISMGMNLNNMAKMLRCAGNDDIVTLKADD------------AQDKIADFEMKLMD 378
           RCDR++SMGMNL NM+KML+CAGNDDI+T+KADD             QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 379 IDSEHLGIPDAEYQSIVRMPATEFARICKDLSTIGDTGNRLNIMQSLMNYRFVPVLISVS 438
           IDSEHLGIPDAEY SIVRMP+ EF+RICKDLS+IGDT                 V+ISV+
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDT-----------------VVISVT 180

Query: 439 KDGVQFSTRGDIGTANIVCRRNTTVDKPEEAVTIEMEEPVGLTFALRYLNSFTKATPLAN 498
           K+GV+FST GDIGTANIV R+NTTVDKPE+A+ IEM EPV L+FALRY+NSFTKATPL+ 
Sbjct: 181 KEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSE 240

Query: 499 QVTISMSSDLPVVVEYRIEDMGYIRYYLAPKIEEEDE 524
            VTIS+SS+LPVVVEY++ +MGYIRYYLAPKIEEE++
Sbjct: 241 TVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEED 260

[Close]

BLAST of Lsi04G009510 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 319.7 bits (818), Expect = 5.2e-87
Identity = 150/197 (76.14%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 24  MSFIGTQQKCKACEKTVYPVDELSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 83
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 84  HFEQLFKETGNFSKNFLSPAKSSEKPIPELSAHPVASCWFQTRSPSKAASMFSGTQEKCA 143
           HFEQLFKE+G+F+KNF SPAKS++K  PEL           TR+PS+ A  FSGTQEKCA
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPEL-----------TRTPSRVAGRFSGTQEKCA 120

Query: 144 TCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGS 203
           TC KT YP+EKVTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGS
Sbjct: 121 TCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 180

Query: 204 YNHLIKSASMKRQAATS 221
           YNHLIKSAS+KR AA +
Sbjct: 181 YNHLIKSASIKRSAAAA 186

[Close]

BLAST of Lsi04G009510 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 319.7 bits (818), Expect = 5.2e-87
Identity = 150/197 (76.14%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 24  MSFIGTQQKCKACEKTVYPVDELSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 83
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 84  HFEQLFKETGNFSKNFLSPAKSSEKPIPELSAHPVASCWFQTRSPSKAASMFSGTQEKCA 143
           HFEQLFKE+G+F+KNF SPAKS++K  PEL           TR+PS+ A  FSGTQEKCA
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPEL-----------TRTPSRVAGRFSGTQEKCA 120

Query: 144 TCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGS 203
           TC KT YP+EKVTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGS
Sbjct: 121 TCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 180

Query: 204 YNHLIKSASMKRQAATS 221
           YNHLIKSAS+KR AA +
Sbjct: 181 YNHLIKSASIKRSAAAA 186

[Close]

BLAST of Lsi04G009510 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 319.7 bits (818), Expect = 5.2e-87
Identity = 150/197 (76.14%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 24  MSFIGTQQKCKACEKTVYPVDELSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 83
           MSF GTQQKCKACEKTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 84  HFEQLFKETGNFSKNFLSPAKSSEKPIPELSAHPVASCWFQTRSPSKAASMFSGTQEKCA 143
           HFEQLFKE+G+F+KNF SPAKS++K  PEL           TR+PS+ A  FSGTQEKCA
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPEL-----------TRTPSRVAGRFSGTQEKCA 120

Query: 144 TCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGS 203
           TC KT YP+EKVTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGS
Sbjct: 121 TCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGS 180

Query: 204 YNHLIKSASMKRQAATS 221
           YNHLIKSAS+KR AA +
Sbjct: 181 YNHLIKSASIKRSAAAA 186

The following BLAST results are available for this feature:

BLAST of Lsi04G009510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82797	2.4e-113	76.90	Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=...	[more]
P24314	1.6e-112	76.17	Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1	[more]
Q00265	2.6e-112	63.09	Proliferating cell nuclear antigen large form OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q9M7Q7	1.3e-111	75.09	Proliferating cellular nuclear antigen 1 OS=Arabidopsis thaliana OX=3702 GN=PCNA...	[more]
Q43124	1.3e-111	74.64	Proliferating cell nuclear antigen OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of Lsi04G009510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BG12	2.9e-154	82.62	Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E4U2	2.9e-154	82.62	Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 ...	[more]
A0A0A0KSC4	2.7e-152	81.99	Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_5G198160 PE...	[more]
A0A6J1DUY3	1.8e-148	81.02	Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC11102372...	[more]
A0A1S3CJ20	1.4e-145	82.02	Proliferating cell nuclear antigen OS=Cucumis melo OX=3656 GN=LOC103501410 PE=3 ...	[more]

BLAST of Lsi04G009510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891866.1	6.4e-164	86.29	proliferating cell nuclear antigen-like [Benincasa hispida]	[more]
XP_016902995.1	6.0e-154	82.62	PREDICTED: proliferating cell nuclear antigen-like isoform X1 [Cucumis melo] >KA...	[more]
XP_004150242.1	5.6e-152	81.99	proliferating cell nuclear antigen [Cucumis sativus] >KGN50626.1 hypothetical pr...	[more]
XP_022156894.1	3.8e-148	81.02	proliferating cell nuclear antigen-like [Momordica charantia]	[more]
KAG7030688.1	4.6e-146	79.46	hypothetical protein SDJN02_04725, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi04G009510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07370.1	9.3e-113	75.09	proliferating cellular nuclear antigen 1	[more]
AT2G29570.1	2.7e-112	75.09	proliferating cell nuclear antigen 2	[more]
AT3G55770.1	5.2e-87	76.14	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	5.2e-87	76.14	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	5.2e-87	76.14	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 519..539
None	No IPR available	COILS	Coil	Coil	coord: 350..370
None	No IPR available	GENE3D	3.70.10.10		coord: 259..523 e-value: 1.4E-107 score: 360.9
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 136..206 e-value: 7.7E-19 score: 69.7 coord: 27..97 e-value: 7.9E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 535..618
None	No IPR available	PANTHER	PTHR11352:SF8	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 259..580
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 259..580
None	No IPR available	CDD	cd00577	PCNA	coord: 263..517 e-value: 1.24141E-89 score: 276.047
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 142..202 e-value: 2.88428E-39 score: 136.061
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 29..91 e-value: 8.97744E-44 score: 148.382
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 25..58
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 168..207
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 259..372
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 373..518
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..167
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 59..99
IPR000730	Proliferating cell nuclear antigen, PCNA	PRINTS	PR00339	PCNACYCLIN	coord: 466..480 score: 76.19 coord: 504..521 score: 67.72 coord: 292..310 score: 80.2 coord: 268..287 score: 70.48 coord: 314..338 score: 67.43
IPR000730	Proliferating cell nuclear antigen, PCNA	TIGRFAM	TIGR00590	TIGR00590	coord: 259..522 e-value: 2.8E-108 score: 359.2
IPR000730	Proliferating cell nuclear antigen, PCNA	HAMAP	MF_00317	DNApol_clamp_arch	coord: 260..518 score: 17.065964
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 32..84 e-value: 4.2E-13 score: 59.5 coord: 141..193 e-value: 4.7E-12 score: 56.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 33..88 e-value: 3.8E-11 score: 43.0 coord: 142..197 e-value: 8.3E-10 score: 38.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 33..67
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 140..200 score: 12.5434
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 31..91 score: 13.4542
IPR022649	Proliferating cell nuclear antigen, PCNA, C-terminal	PFAM	PF02747	PCNA_C	coord: 373..517 e-value: 5.1E-52 score: 175.4
IPR022648	Proliferating cell nuclear antigen, PCNA, N-terminal	PFAM	PF00705	PCNA_N	coord: 259..358 e-value: 2.3E-47 score: 159.9
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS00293	PCNA_2	coord: 319..337
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS01251	PCNA_1	coord: 292..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009510.1	Lsi04G009510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006272	leading strand elongation
biological_process	GO:0006298	mismatch repair
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0019985	translesion synthesis
cellular_component	GO:0043626	PCNA complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity