Lsi04G009470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	17.8 kDa class I heat shock protein-like
Location	chr04: 9837088 .. 9837567 (+)
RNA-Seq Expression	Lsi04G009470
Synteny	Lsi04G009470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTGATTCAAAGCATTTTTGGTAGTCGCCGGAGCAACATCTTTGACCCATTTTCATTAGATGTTTGGGATCCATTCCATGGATTTTCATTCTCAAACTCACTGGCTAATCTTCCTTCCTCTGCTCCTGAAATCTCTACTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGTCGATCTCCCCGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAAAGAAGCAAAGAACAGGAAGAGAGGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCCGAGAATGCCAAGGTTGAAGAAGTGAAAGCCAGTATGGAAAATGGAGTTCTGACTGTGACATTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAATCCATTGAAATCTCTGGTTAA

mRNA sequence

ATGTCACTGATTCAAAGCATTTTTGGTAGTCGCCGGAGCAACATCTTTGACCCATTTTCATTAGATGTTTGGGATCCATTCCATGGATTTTCATTCTCAAACTCACTGGCTAATCTTCCTTCCTCTGCTCCTGAAATCTCTACTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGTCGATCTCCCCGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAAAGAAGCAAAGAACAGGAAGAGAGGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCCGAGAATGCCAAGGTTGAAGAAGTGAAAGCCAGTATGGAAAATGGAGTTCTGACTGTGACATTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAATCCATTGAAATCTCTGGTTAA

Coding sequence (CDS)

ATGTCACTGATTCAAAGCATTTTTGGTAGTCGCCGGAGCAACATCTTTGACCCATTTTCATTAGATGTTTGGGATCCATTCCATGGATTTTCATTCTCAAACTCACTGGCTAATCTTCCTTCCTCTGCTCCTGAAATCTCTACTTTTGTCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGTCGATCTCCCCGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAAAGAAGCAAAGAACAGGAAGAGAGGAACGACAAATGGCATAGAATTGAACGAAGCAGTGGGAAGTTCATGAGGAGATTCAGGCTGCCCGAGAATGCCAAGGTTGAAGAAGTGAAAGCCAGTATGGAAAATGGAGTTCTGACTGTGACATTACCAAAAGTGGAAGAGAAGAAGCCTGAAATCAAATCCATTGAAATCTCTGGTTAA

Protein sequence

MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETPQAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRLPENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG

Homology

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BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 4.6e-61
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI SIFG RR+N+FDPFSLDV+DPF GF   + LAN P  A +++ F N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           +AH+F  DLPG+ K+EVKVEVE+G +LQISGERS E EE+NDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAK+EE+KASMENGVL+VT+PKV EKKPE+KSI+ISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

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BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-60
Identity = 112/159 (70.44%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI SIFG RRSN+FDPFS D+WDPF GF   +S     S+A +++ F N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           +AH+F  DLPG+ K+EVKVEVE+  VLQISGERSKE EE+NDKWHR+ER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAK+EEVKA+MENGVLTV +PK  EKKP++KSI+ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

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BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.9e-60
Identity = 114/159 (71.70%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MS+I S FG RRSN+FDPFSLDVWDPF  F    S A+      E + FVNT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAH+F  DLPG+ K+EVKVE+EEG+VLQISGER+KE+EE+NDKWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKV+EVKA+M NGV+TVT+PKVE KKPE+K+I+ISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

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BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.7e-60
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAP-EISTFVNTRIDWKET 60
           MSLI S FG RRSN+FDPFSLDVWDPF  F F+NS   L +S P E S FV+TR+DWKET
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSA--LSASFPRENSAFVSTRVDWKET 60

Query: 61  PQAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFR 120
           P+AH+F  DLPG+ K+EVKVE+E+ RVLQISGERS E+E++ND+WHR+ERSSGKFMRRFR
Sbjct: 61  PEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           LPENAK+++VKA+MENGVLTVT+PK E KKPE+K+I+ISG
Sbjct: 121 LPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

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BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.7e-60
Identity = 111/161 (68.94%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSL--ANLPSSAPEISTFVNTRIDWKE 60
           MSLI + FG RR+N+FDPFSLDVWDPF  F F N+L  A+ P  + E S FV+TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRF 120
           TP+AH+F  D+PG+ K+EVKV++E+ +VLQISGER+ E+E++ND WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           RLPENAKVE+VKASMENGVLTVT+PK E KKP++K+IEISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

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BLAST of Lsi04G009470 vs. ExPASy TrEMBL
Match: A0A0A0KP10 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.6e-72
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI S FG RR+N+FDPFSLDVWDPF GF FSNSL NLPSSAPE S F NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIFT DLPGINKQEVKVEV+EGRVLQISGERSKEQEE+NDKWHRIERSSG+FMRRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEIS 159
           PENAKV+EVKASMENGVLTVT+PKVEEKKPEIKSIEIS
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 158

[Close]

BLAST of Lsi04G009470 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           M+LI +IFG RRSN+FDPFSLD+WDPF GF FSNSLANLPSSA + S F NTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIF  DLPGINK+EVKVEVEEGRVLQISGERSKEQEE+NDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVT+PK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009470 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 139/159 (87.42%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           M+LI SIFG RRSN+FDPFSLD+WDPF GFSFSNSLANLPSSA E S F NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIF  DLPGI K+EVKVEVEEGRVLQISGERSKEQEE+NDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVT+PK+EEKKPEIKSI+I+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009470 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.9e-72
Identity = 139/159 (87.42%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           M+LI SIFG RRSN+FDPFSLD+WDPF GFSFSNSLANLPSSA E S F NTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIF  DLPGI K+EVKVEVEEGRVLQISGERSKEQEE+NDKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKA+MENGVLTVT+PK+EEKKPEIKSI+I+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009470 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71
Identity = 139/159 (87.42%), Postives = 148/159 (93.08%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           M+LI SIF  RRSN+FDPFSLD+WDPF GF FSNSLANLPSSA E S F NTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIF  DLPGINK+EVKVEVEEGRVLQISGERSKEQEE+NDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVT+PK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009470 vs. NCBI nr
Match: XP_038892388.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI S FG R+SNIFDPFSLDVWDPF GFSFSNSLAN+PSSA E S F NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
            AHIFT DLPGINKQEVKVEVEEGRVLQISGERSKEQEE+NDKWHRIERSSGKFMRRFRL
Sbjct: 61  HAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENG+LTVT+PKVE+KKP+IKSIEISG
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEISG 159

[Close]

BLAST of Lsi04G009470 vs. NCBI nr
Match: XP_011654976.2 (17.8 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 4.3e-72
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI S FG RR+N+FDPFSLDVWDPF GF FSNSL NLPSSAPE S F NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAH+FT DLPGINKQEVKVEV+EGRVLQISGERSKEQEE+NDKWHRIERSSG+FMRRFRL
Sbjct: 61  QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEIS 159
           PENAKV+EVKASMENGVLTVT+PKVEEKKPEIKSIEIS
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 158

[Close]

BLAST of Lsi04G009470 vs. NCBI nr
Match: KAE8648011.1 (hypothetical protein Csa_021429 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 4.3e-72
Identity = 140/158 (88.61%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI S FG RR+N+FDPFSLDVWDPF GF FSNSL NLPSSAPE S F NTRIDWKETP
Sbjct: 64  MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 123

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAH+FT DLPGINKQEVKVEV+EGRVLQISGERSKEQEE+NDKWHRIERSSG+FMRRFRL
Sbjct: 124 QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 183

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEIS 159
           PENAKV+EVKASMENGVLTVT+PKVEEKKPEIKSIEIS
Sbjct: 184 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIKSIEIS 221

[Close]

BLAST of Lsi04G009470 vs. NCBI nr
Match: XP_038891783.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 7.3e-72
Identity = 141/159 (88.68%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI S FG R+SNIFDPFSLDVWDPF GFSFSNSLAN+PSSA E S F NTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
            AHIFT DLPGINK+EVKVEVEEGRVLQISGERSKEQEE+NDKWHRIERSSGKFMRRFRL
Sbjct: 61  HAHIFTADLPGINKREVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENG+LTVT+PKVE+KKP+IKSIEISG
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPDIKSIEISG 159

[Close]

BLAST of Lsi04G009470 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           M+LI +IFG RRSN+FDPFSLD+WDPF GF FSNSLANLPSSA + S F NTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           QAHIF  DLPGINK+EVKVEVEEGRVLQISGERSKEQEE+NDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVLTVT+PK+EEKKPEIKSI+ISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009470 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 235.3 bits (599), Expect = 3.3e-62
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI SIFG RR+N+FDPFSLDV+DPF GF   + LAN P  A +++ F N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           +AH+F  DLPG+ K+EVKVEVE+G +LQISGERS E EE+NDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAK+EE+KASMENGVL+VT+PKV EKKPE+KSI+ISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009470 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-61
Identity = 112/159 (70.44%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSLI SIFG RRSN+FDPFS D+WDPF GF   +S     S+A +++ F N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           +AH+F  DLPG+ K+EVKVEVE+  VLQISGERSKE EE+NDKWHR+ER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAK+EEVKA+MENGVLTV +PK  EKKP++KSI+ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009470 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 109/159 (68.55%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   MSLIQSIFGSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKETP 60
           MSL+ S FG RR+N+FDPFSLDVWDPF GF  +  L N P  A +++ F N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFRL 120
           +AH+F  D+PG+ K+EVKVEVE+G +LQISGERS E EE++D WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           PENAKVEEVKASMENGVL+VT+PKV+E KPE+KS++ISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lsi04G009470 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-51
Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MSLIQSIF-GSRRSNIFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKET 60
           MS+I S F  +RRSNIFDPFSLDVWDPF   + S       S + E S  VN R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRFR 120
           P+AH+F  DLPG+ K+EVKVE+EE  VL+ISGER  E+E++ND WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTLPKVEEKKPEIKSIEISG 160
           LPEN K+++VKA+MENGVLTVT+PK E KK ++KSI+ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Lsi04G009470 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.9e-50
Identity = 103/163 (63.19%), Postives = 127/163 (77.91%), Query Frame = 0


Query: 1   MSLIQSIFG-SRRSN-IFDPFSLDVWDPFHGFSFSNSLANLPSSAPEISTFVNTRIDWKE 60
           MSLI S FG +RRSN IFDPFSLDVWDPF    F +SL+       E S   N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFTVDLPGINKQEVKVEVEEGRVLQISGERSKEQEERNDKWHRIERSSGKFMRRF 120
           T +AH+F  DLPG+ K+EVKVE+E+  VL+ISGER  E+EE+ D WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTLPKVEE--KKPEIKSIEISG 160
           +LPEN K+++VKASMENGVLTVT+PKVEE  KK ++KSI+ISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Lsi04G009470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	4.6e-61	71.07	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P19037	1.8e-60	70.44	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	3.9e-60	71.70	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27880	8.7e-60	71.88	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P05478	8.7e-60	68.94	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]

BLAST of Lsi04G009470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP10	1.6e-72	89.24	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 S...	[more]
A0A5A7UAZ9	7.9e-72	86.79	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	7.9e-72	87.42	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	7.9e-72	87.42	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
A0A5A7T3F7	1.0e-71	87.42	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Lsi04G009470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892388.1	2.5e-72	89.31	17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17....	[more]
XP_011654976.2	4.3e-72	88.61	17.8 kDa class I heat shock protein [Cucumis sativus]	[more]
KAE8648011.1	4.3e-72	88.61	hypothetical protein Csa_021429 [Cucumis sativus]	[more]
XP_038891783.1	7.3e-72	88.68	17.8 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0051547.1	1.6e-71	86.79	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]

BLAST of Lsi04G009470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	3.3e-62	71.07	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	1.2e-61	70.44	heat shock protein 18.2	[more]
AT3G46230.1	1.1e-60	68.55	heat shock protein 17.4	[more]
AT2G29500.1	2.6e-51	63.13	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.9e-50	63.19	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..159 e-value: 5.3E-51 score: 174.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 26..159
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 1.0E-29 score: 102.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 31.393566
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 7.19048E-56 score: 168.637
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 49..156 score: 9.025957

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009470.1	Lsi04G009470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding