Lsi04G009380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	17.8 kDa class I heat shock protein-like
Location	chr04: 9656887 .. 9657366 (+)
RNA-Seq Expression	Lsi04G009380
Synteny	Lsi04G009380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTCCGACCCCTTTTCATTGAACGTTTGGGATGCATTCGAAGGTTTCCCATTTTCAAACTCATTGGTTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAGATCAGTGGGGAGAGAAGCAAAGAAGAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAAGAGGTGAAGGCTAGCATGGAGAATGGAGTGCTGACAGTGACAGTGCCAAAAATGGAAGAGAAGAAGCTAGAAATCAAGTCAATTGACATCTCTGGTTAA

mRNA sequence

ATGGCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTCCGACCCCTTTTCATTGAACGTTTGGGATGCATTCGAAGGTTTCCCATTTTCAAACTCATTGGTTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAGATCAGTGGGGAGAGAAGCAAAGAAGAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAAGAGGTGAAGGCTAGCATGGAGAATGGAGTGCTGACAGTGACAGTGCCAAAAATGGAAGAGAAGAAGCTAGAAATCAAGTCAATTGACATCTCTGGTTAA

Coding sequence (CDS)

ATGGCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTCCGACCCCTTTTCATTGAACGTTTGGGATGCATTCGAAGGTTTCCCATTTTCAAACTCATTGGTTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGACTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAGATCAGTGGGGAGAGAAGCAAAGAAGAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAAGAGGTGAAGGCTAGCATGGAGAATGGAGTGCTGACAGTGACAGTGCCAAAAATGGAAGAGAAGAAGCTAGAAATCAAGTCAATTGACATCTCTGGTTAA

Protein sequence

MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG

Homology

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BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-63
Identity = 121/159 (76.10%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+LIPS FGGRRSNV DPFSL+VWD F+ FPF+NS ++  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK+++VKA+MENGVLTVTVPK E KK E+K+IDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-63
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNV DPFS ++WD FEGF   +S +   S+AR+ +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK+EEVKA+MENGVLTV VPK  EKK ++KSIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.2e-62
Identity = 119/159 (74.84%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M++IPS FGGRRSNV DPFSL+VWD F+ FP   S  +     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTS--SASEFGKETAAFVNTHIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KE+EEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKV+EVKA+M NGV+TVTVPK+E KK E+K+IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-62
Identity = 119/159 (74.84%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+NV DPFSL+V+D FEGF   + L N P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK+EE+KASMENGVL+VTVPK+ EKK E+KSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-62
Identity = 117/161 (72.67%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSL--VNVPSSARETSAFANTRIDWKE 60
           M+LIP+ FGGRR+NV DPFSL+VWD F+ FPF N+L   + P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRF 120
           TPEAH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E+E+KND WHRVERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           RLPENAKVE+VKASMENGVLTVTVPK E KK ++K+I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNV DPFSL++WD FEGFPFSNSL N+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.5e-75
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNV DPFSL++WD FEGFPFSNSL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL
Match: H6TB42 (HSP18.1A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.6e-75
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNV DPFSL+VWD FEGFPFSNSL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKK E+KSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGRRSNV DPFSL++WD FEGF FSNSL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKA+MENGVLTVTVPKMEEKK EIKSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL
Match: A0A5D3DKI4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00230 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNV DPFSL++WD FEGFPFSNSL N+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 148/159 (93.08%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGRRSNV DPFSL++WD FEGFPFS+SL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSSSLANIPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKA+MENGVLTVTVPKMEEKK EIK+IDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKTIDISG 159

[Close]

BLAST of Lsi04G009380 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 290.8 bits (743), Expect = 7.1e-75
Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNV DPFSL++WD FEGFPFSNSL N+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. NCBI nr
Match: XP_038891780.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 7.1e-75
Identity = 149/159 (93.71%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGR SNV DPFSL++WD FEGFPFS SL NVPSSARETS FANTRIDWKETP
Sbjct: 1   MALIPSIFGGRLSNVFDPFSLDIWDPFEGFPFSTSLANVPSSARETSVFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. NCBI nr
Match: KAA0037328.1 (18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 9.2e-75
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNV DPFSL++WD FEGFPFSNSL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKK EIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. NCBI nr
Match: ADU55789.1 (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNV DPFSL+VWD FEGFPFSNSL N+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK EEVKASMENGVLTVTVPK+EEKK E+KSIDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 242.7 bits (618), Expect = 2.1e-64
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNV DPFS ++WD FEGF   +S +   S+AR+ +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKFMRRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK+EEVKA+MENGVLTV VPK  EKK ++KSIDISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009380 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 3.0e-63
Identity = 119/159 (74.84%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+NV DPFSL+V+D FEGF   + L N P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAK+EE+KASMENGVL+VTVPK+ EKK E+KSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009380 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 237.3 bits (604), Expect = 8.7e-63
Identity = 117/159 (73.58%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKETP 60
           M+L+PS FGGRR+NV DPFSL+VWD FEGF  +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           PENAKVEEVKASMENGVL+VTVPK++E K E+KS+DISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lsi04G009380 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 3.6e-53
Identity = 106/160 (66.25%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 1   MALIPSIF-GGRRSNVSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKET 60
           M++IPS F   RRSN+ DPFSL+VWD F+    S       S +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRFR 120
           PEAH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KND WHRVERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKMEEKKLEIKSIDISG 160
           LPEN K+++VKA+MENGVLTVTVPK E KK ++KSI ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Lsi04G009380 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 4.0e-52
Identity = 109/163 (66.87%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MALIPSIFG-GRRSN-VSDPFSLNVWDAFEGFPFSNSLVNVPSSARETSAFANTRIDWKE 60
           M+LIPS FG  RRSN + DPFSL+VWD F+   F +SL      + ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSL------SGETSAITNARVDWKE 60

Query: 61  TPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEEEEKNDKWHRVERSSGKFMRRF 120
           T EAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK D WHRVERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEE--KKLEIKSIDISG 160
           +LPEN K+++VKASMENGVLTVTVPK+EE  KK ++KSIDISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Lsi04G009380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27880	2.2e-63	76.10	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	2.9e-63	76.73	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	3.2e-62	74.84	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P13853	4.2e-62	74.84	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P05478	4.2e-62	72.67	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]

BLAST of Lsi04G009380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAZ9	3.4e-75	92.45	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3F7	4.5e-75	93.08	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
H6TB42	7.6e-75	91.82	HSP18.1A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BEM2	1.0e-74	91.82	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DKI4	1.0e-74	92.45	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Lsi04G009380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892901.1	1.9e-75	93.08	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0051547.1	7.1e-75	92.45	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]
XP_038891780.1	7.1e-75	93.71	17.8 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0037328.1	9.2e-75	93.08	18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]
ADU55789.1	1.6e-74	91.82	HSP18.1A [Citrullus lanatus]	[more]

BLAST of Lsi04G009380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	2.1e-64	76.73	heat shock protein 18.2	[more]
AT1G53540.1	3.0e-63	74.84	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	8.7e-63	73.58	heat shock protein 17.4	[more]
AT2G29500.1	3.6e-53	66.25	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.0e-52	66.87	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..159 e-value: 6.2E-51 score: 174.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 30..159
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 8.5E-31 score: 106.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 31.699987
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 2.89581E-49 score: 151.689

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009380.1	Lsi04G009380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding