Lsi04G009350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	17.8 kDa class I heat shock protein-like
Location	chr04: 9647275 .. 9647754 (+)
RNA-Seq Expression	Lsi04G009350
Synteny	Lsi04G009350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCTTTTTCATTGGACGTTTGGGATCCATTCGAAGGTTTCCCATTTTCAAACTCATTGGCTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGATTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAAATCAGTGGGGAGAGAAGCCAAGAACAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTTATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAAGCCAGCATGGAGAATGGGGTGCTGACAGTGACAGTGCCTAAAATGGAAGAGAAGAAGCCAGAAATCAAGTCTATTGACATCTCTGGCTAA

mRNA sequence

ATGGCTTTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCTTTTTCATTGGACGTTTGGGATCCATTCGAAGGTTTCCCATTTTCAAACTCATTGGCTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGATTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAAATCAGTGGGGAGAGAAGCCAAGAACAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTTATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAAGCCAGCATGGAGAATGGGGTGCTGACAGTGACAGTGCCTAAAATGGAAGAGAAGAAGCCAGAAATCAAGTCTATTGACATCTCTGGCTAA

Coding sequence (CDS)

ATGGCTTTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCTTTTTCATTGGACGTTTGGGATCCATTCGAAGGTTTCCCATTTTCAAACTCATTGGCTAATGTTCCTTCCTCTGCTCGTGAGACCTCTGCTTTTGCCAACACTCGCATCGATTGGAAAGAGACTCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGAATCAAAAAGGAAGAAGTCAAAGTTGAAGTGGAAGAAGGCAGAGTTCTACAAATCAGTGGGGAGAGAAGCCAAGAACAAGAGGAGAAGAACGACAAATGGCATAGAGTGGAACGAAGCAGTGGAAAGTTTATGAGGAGATTCAGGCTGCCTGAGAATGCTAAAGTTGAGGAGGTGAAAGCCAGCATGGAGAATGGGGTGCTGACAGTGACAGTGCCTAAAATGGAAGAGAAGAAGCCAGAAATCAAGTCTATTGACATCTCTGGCTAA

Protein sequence

MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG

Homology

[Close]

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.4e-67
Identity = 125/159 (78.62%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPS FGGRRSNVFDPFSLDVWDPF+ FPF+NS  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAK+++VKA+MENGVLTVTVPK E KKPE+K+IDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.1e-66
Identity = 128/160 (80.00%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSNSLANVPSSARETSAFANTRIDWKET 60
           M+LIPSIFGGRRSNVFDPFS D+WDPFEG F  S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFR 120
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERS+E EEKNDKWHRVER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           LPENAK+EEVKA+MENGVLTV VPK  EKKP++KSIDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 2.8e-66
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+NVFDPFSLDV+DPFEGF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAK+EE+KASMENGVL+VTVPK+ EKKPE+KSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.7e-66
Identity = 122/161 (75.78%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSL--ANVPSSARETSAFANTRIDWKE 60
           M+LIP+ FGGRR+NVFDPFSLDVWDPF+ FPF N+L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRF 120
           TPEAH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E+E+KND WHRVERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           RLPENAKVE+VKASMENGVLTVTVPK E KKP++K+I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 8.2e-66
Identity = 123/159 (77.36%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M++IPS FGGRRSNVFDPFSLDVWDPF+ FP   S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+EEG+VLQISGER++E+EEKNDKWHRVERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKV+EVKA+M NGV+TVTVPK+E KKPE+K+IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.9e-79
Identity = 152/159 (95.60%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL
Match: A0A5A7T3F7 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00190 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.1e-79
Identity = 153/159 (96.23%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 151/159 (94.97%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLD+WDPFEGF FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKA+MENGVLTVTVPKMEEKKPEIKSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL
Match: A0A5D3DKI4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00230 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 152/159 (95.60%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 151/159 (94.97%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLD+WDPFEGF FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKA+MENGVLTVTVPKMEEKKPEIKSIDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of Lsi04G009350 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 153/159 (96.23%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGRRSNVFDPFSLD+WDPFEGFPFS+SLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSSSLANIPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKA+MENGVLTVTVPKMEEKKPEIK+IDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKTIDISG 159

[Close]

BLAST of Lsi04G009350 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 8.1e-79
Identity = 152/159 (95.60%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIP+IFGGRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. NCBI nr
Match: XP_038891780.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 8.1e-79
Identity = 154/159 (96.86%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIFGGR SNVFDPFSLD+WDPFEGFPFS SLANVPSSARETS FANTRIDWKETP
Sbjct: 1   MALIPSIFGGRLSNVFDPFSLDIWDPFEGFPFSTSLANVPSSARETSVFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. NCBI nr
Match: KAA0037328.1 (18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 153/159 (96.23%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. NCBI nr
Match: TYK24125.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 152/159 (95.60%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MALIPSIF GRRSNVFDPFSLD+WDPFEGFPFSNSLAN+PSSAR+TSAFANTRIDWKETP
Sbjct: 1   MALIPSIFDGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           +AHIFKADLPGI KEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRVERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-67
Identity = 128/160 (80.00%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSNSLANVPSSARETSAFANTRIDWKET 60
           M+LIPSIFGGRRSNVFDPFS D+WDPFEG F  S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFR 120
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERS+E EEKNDKWHRVER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           LPENAK+EEVKA+MENGVLTV VPK  EKKP++KSIDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of Lsi04G009350 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 2.0e-67
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRR+NVFDPFSLDV+DPFEGF   + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAK+EE+KASMENGVL+VTVPK+ EKKPE+KSIDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of Lsi04G009350 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-66
Identity = 121/159 (76.10%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+L+PS FGGRR+NVFDPFSLDVWDPFEGF  +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFRL 120
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           PENAKVEEVKASMENGVL+VTVPK++E KPE+KS+DISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of Lsi04G009350 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-55
Identity = 109/160 (68.12%), Postives = 129/160 (80.62%), Query Frame = 0


Query: 1   MALIPSIF-GGRRSNVFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKET 60
           M++IPS F   RRSN+FDPFSLDVWDPF+    S       S +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRFR 120
           PEAH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KND WHRVERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 160
           LPEN K+++VKA+MENGVLTVTVPK E KK ++KSI ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of Lsi04G009350 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-55
Identity = 112/163 (68.71%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MALIPSIFG-GRRSN-VFDPFSLDVWDPFEGFPFSNSLANVPSSARETSAFANTRIDWKE 60
           M+LIPS FG  RRSN +FDPFSLDVWDPF+   F +SL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSQEQEEKNDKWHRVERSSGKFMRRF 120
           T EAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK D WHRVERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPENAKVEEVKASMENGVLTVTVPKMEE--KKPEIKSIDISG 160
           +LPEN K+++VKASMENGVLTVTVPK+EE  KK ++KSIDISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Lsi04G009350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27880	7.4e-67	78.62	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	2.1e-66	80.00	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	2.8e-66	77.99	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P05478	3.7e-66	75.78	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P27396	8.2e-66	77.36	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of Lsi04G009350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAZ9	3.9e-79	95.60	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T3F7	5.1e-79	96.23	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	1.1e-78	94.97	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DKI4	1.1e-78	95.60	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	1.1e-78	94.97	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]

BLAST of Lsi04G009350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892901.1	2.1e-79	96.23	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0051547.1	8.1e-79	95.60	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]
XP_038891780.1	8.1e-79	96.86	17.8 kDa class I heat shock protein-like [Benincasa hispida]	[more]
KAA0037328.1	1.1e-78	96.23	18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]
TYK24125.1	2.4e-78	95.60	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Lsi04G009350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.5e-67	80.00	heat shock protein 18.2	[more]
AT1G53540.1	2.0e-67	77.99	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.7e-66	76.10	heat shock protein 17.4	[more]
AT2G29500.1	1.0e-55	68.13	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	6.6e-55	68.71	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..158 e-value: 1.9E-31 score: 108.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..159 score: 32.271973
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..159 e-value: 9.6E-54 score: 183.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 29..159
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..159
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..159
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 3.14678E-48 score: 148.992

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009350.1	Lsi04G009350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding