Lsi04G009040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G009040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Vesicle transport v-SNARE family protein
Location	chr04: 9078707 .. 9081929 (-)
RNA-Seq Expression	Lsi04G009040
Synteny	Lsi04G009040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGATCATCTTTCATTTTTTTCTTCTCTAATTTTCCCTTGGAAAAAAAAATTATATGAGGAACTAAGCAAGGCATATTGTCGTTGTCGGCAATTCCTTCTCAGCCACCACGGAGAGAATTTGGGTGGCTGCATTTCACGAACTGATTTCTCATTCGTTTTCCCTTTCCCTTTCCTTCTTGCACCAATTTCCTCAGCCTCTGCAACCTCCGATTTCCGATCTGCCAATTTTCGCCGCAAAATTTTGAGCGGAGGAGTCGCCGGAAAGTCAAAGTAAGTTTTTCTCTGTCTTTCACCAGAATTCAGTCAAGATGAGTGAGGTTTTTGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGGAAATCCAACTCTTTCTCCGCCTCGGATTCAGGTAATTCCTAGACCTTTGCTGCTCCGATTTTCTATATTTCGTGTCTGATTTCAAGGAAGAGAGATGAAGAAGTAGAATTTAGAACTTGCAGCGTTTTGTTTCTGTTGTTAGAATTTCGAAGAGAATTCTTGGAATTGTGGTTAGAGATCTTGAGTTAAAATGAGTAGATGCTGAGGTTTCTAAACCGTTTGAGAAGGATGTGAATATGGGACTGGGATGGTAATTGATAGCCGGATCGAAATTTTAGTGTTTCTTACTAGTTCTTCAGAATTAGATTGCAAAATAACTTGGATGTGCAGAATTGGATTCTACTTTGGAAATGAACTGGAAAAGGAAGTTGATTATTGAGAGACTCTTCTTTTGATGGTGAACTATTGAAATGTTTGCTAATTTTAGGTTTATGTGAATTGCAGAACAGAAACATCAATGGCTCTCGGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGGTAGGTTTAAAGAGCCTTCTATTGGCTTTCTTTCTTTTTCTTTCCAGGTTGGTTAGATTCATACTGATATGCATACAATGTTTTTATCTTTATTGGTTATCTAGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGGGTAAAGGCTATGCTACTTGCTAAGTTACGGGAGTACAAAGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAACTATTGGAGTCTGGAATGGCAGATGCTCATTTGGTAGATTTTCATCATTCAAACTTTACAGTTGCCTTCAAATTTTAAGCATTACATATACTCTATCTCCTTACTAATGCTCCCCCAATCGTCAGTTGAGTTCTAAGCCTGGGAACAAATTGAGGGAGCATATCATTGATTGAAATGATTTTGTCTTGATGTACTTATATGAAATGTCCAAAGTTTTTGGCTATTTTAGTAGCCTCTGTTTTAGGCTAAGCTTAACTTTCCTTTTTGAGGTTTGAATCTTCACTCCTATGTTTAAATGGTAATATTTTCTTAAAGGTATTGCATATCTTAAGTTCTTGGGATGGTTGTAATCATAAAAAGTAAGGCTATATAGTCAATATGGTTGTAGCTAGGTATAAATGCTCCCCTCTCTTCCACCACGATAGCTTTTTCTCCCTCCTTTCCAATTGGTTGGGTTTTTTTGCTAGAACCCTTTATATGGGTTATTCTCGTACCATCAATGAAATTGTTTCTTATAAAAAATGAATAAATAATAATAAGAAAAAAATCTTAAGTTCTCAGGATAATGATAGTTACTATAAAACTTTCTATTTACTAAACCCTGCGATATGAACATCTCATCCAGTCTTTGTTTTTCTTCAATCACTCTTTTGACTGAAGTGATGATAGTTTCTAAGCTTTGTAGATAGACAGTAGACTTATCTTTTCCCCTCTCGATGGCTGTTAGGTCTCAATAAGTGAAACAGAATCTGTTTTTTGAGTAATTGTCAAATTGAGTTGATTTTCTGGATGCTTTCTATCATATAACATCATGTTGAATTTCCATTATGGATCAATTTGTTAGGAACCAAGGTAGTATGGGCTACTTTTGTCCCACAATGGTTAGAATAGGATGACTAATATGGTACTTAAGTGGCTTGGCTCTCTCATCTCAATAGCTGGCTTTTGGGATGTGGTTCTCCAAAATGCTTAAGTACCTAACAATGGTATTAGAGCCAGTTGTCGACGTTCCATAGAGGAGCACCGGTGAAGAGTTTTGACCAGGTGTTTTCCGAGTGAAGTACCTTCGGTCTAGCCGTGGGACGTCGGCTTTTCGGGGATGGGATATTGTAGGAACTAAGGTAGTATGGACTACGTTTGTCCCACATTGGTTAAAATTGGGTGATCAATGTGGTACTTAAGTGGCTTGGCTCTCTCACCTCAATAACTGGCTTTTGGGTGTAGTTCTCCAAGGTACTTAAGTACCTAACACAATCGCAGATCTCTTATACATCGATATTGTTTTAGTTTTGATAATTCGTCATTTGACATAGAAGATACTTGTCTTGCATAGGTTAAATTGACCATTTTTATCACTTTTACTGACGTTCTTACAGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATATATCAGTCGGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTACAGGACTTGCATCAACAGCGCGAAACTCTCCTCCAGTCCCATAAGAGAGTAAGTTTTGTCTTGATATTATGTTCTGGCTGCGTTGTAAGTCCAATCTTTGATGCCATTAACATCCTTAACTTCAACTCTCATTTTAATTTCTAGCCCTTTTTCCATCCTTGGGATAATTCAACTGTTAACACCATGCTTTATGTTGCAGCTTCATGGGGTAGATGACGCCATTGATAAGAGTAAAAGAGTTTTGGCCACGATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATCTTAAGCTCTAACATCATTGAGATGTTTCCTTGATCAAAAAATGAATTCTACTTTTATCATTTGATTTTCCAATCTTACGATTGGTTGTCAATCATATGTTTGATGTATTTCGTTGCGGTGTATGGTTGTTTGTGTCTGTAATAGAATCAAATCTTGTAACTCGATAGCGTTTTGATTAATCAATACCCAGCCAGATAGTAGGCATTTCTTGATTGCTTATTTAAGTGGTTAGTTACTTTCCCTACATGCAC

mRNA sequence

AAATGGATCATCTTTCATTTTTTTCTTCTCTAATTTTCCCTTGGAAAAAAAAATTATATGAGGAACTAAGCAAGGCATATTGTCGTTGTCGGCAATTCCTTCTCAGCCACCACGGAGAGAATTTGGGTGGCTGCATTTCACGAACTGATTTCTCATTCGTTTTCCCTTTCCCTTTCCTTCTTGCACCAATTTCCTCAGCCTCTGCAACCTCCGATTTCCGATCTGCCAATTTTCGCCGCAAAATTTTGAGCGGAGGAGTCGCCGGAAAGTCAAAGTAAGTTTTTCTCTGTCTTTCACCAGAATTCAGTCAAGATGAGTGAGGTTTTTGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGGAAATCCAACTCTTTCTCCGCCTCGGATTCAGAACAGAAACATCAATGGCTCTCGGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGGGTAAAGGCTATGCTACTTGCTAAGTTACGGGAGTACAAAGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAACTATTGGAGTCTGGAATGGCAGATGCTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATATATCAGTCGGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTACAGGACTTGCATCAACAGCGCGAAACTCTCCTCCAGTCCCATAAGAGAGTAAGTTTTGTCTTGATATTATGTTCTGGCTGCGTTCTTCATGGGGTAGATGACGCCATTGATAAGAGTAAAAGAGTTTTGGCCACGATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATCTTAAGCTCTAACATCATTGAGATGTTTCCTTGATCAAAAAATGAATTCTACTTTTATCATTTGATTTTCCAATCTTACGATTGGTTGTCAATCATATGTTTGATGTATTTCGTTGCGGTGTATGGTTGTTTGTGTCTGTAATAGAATCAAATCTTGTAACTCGATAGCGTTTTGATTAATCAATACCCAGCCAGATAGTAGGCATTTCTTGATTGCTTATTTAAGTGGTTAGTTACTTTCCCTACATGCAC

Coding sequence (CDS)

ATGAGTGAGGTTTTTGAGGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGGAAATCCAACTCTTTCTCCGCCTCGGATTCAGAACAGAAACATCAATGGCTCTCGGAAATCAAAGTTAGTTTGGATGAGGCTGATGTTTTGATCCGGAAAATGGACCTTGAGGCCAGAAGTTTGCAGCCAGGGGTAAAGGCTATGCTACTTGCTAAGTTACGGGAGTACAAAGCTGATCTTGGAAAACTGAAAAAGGAATTTAAGAGATTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAACTATTGGAGTCTGGAATGGCAGATGCTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCCATAGAGAGAATATATCAGTCGGGTGAAAGAATCACAGAGAGTAGAAGAACCATGCTGGAGACCGAGGAGCTCGGTGTCTCAATCCTACAGGACTTGCATCAACAGCGCGAAACTCTCCTCCAGTCCCATAAGAGAGTAAGTTTTGTCTTGATATTATGTTCTGGCTGCGTTCTTCATGGGGTAGATGACGCCATTGATAAGAGTAAAAGAGTTTTGGCCACGATGTCTCGAAGAATCAGTCGAAATAAATGGATTGTCGGGTCAGTAATTGGAGTTCTGGTACTTGTAATTATCCTTATACTGTATCTTAAGCTCTAA

Protein sequence

MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEARSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQRERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCSGCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL

Homology

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BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 263.1 bits (671), Expect = 3.0e-69
Identity = 149/232 (64.22%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSA-SDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS+VFEGYERQYCELS N+SRK +S S  S+ E+K   ++EIK  +DEADVLIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQ 120
           RSLQP  KA+ L+KLREYK+DL +LKKEFKR++S +A  ++REEL+ESGMAD H  SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILC 180
           R R+ MS+ER+ QS +RI ESRR MLETEE+G+SI+QDL QQR+TLL +H +        
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNK-------- 180

Query: 181 SGCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
               LHGVDDAIDKSK+VL  MSRR++RNKWI+ SVI  LVL IILI+  KL
Sbjct: 181 ----LHGVDDAIDKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

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BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.5e-63
Identity = 135/231 (58.44%), Postives = 173/231 (74.89%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+ FE YERQYCE+SAN+S+K  S  A D EQK Q LSEIK  ++EA+ L++KMDLEAR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           +L P VK+ LL KLREYK+DL   K E KR+TS N +  AR+ELLE+GMAD   ASADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
            R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL++H+          
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHE---------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDD + KSK++L TM+RR++RNKW +G++I VLVL II ILY KL
Sbjct: 181 --TLHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-62
Identity = 131/231 (56.71%), Postives = 174/231 (75.32%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VF+GYERQYCELSA++S+K +S  + D EQK Q LSEIK  L+ A+VLIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           +L P +K+ LL KLRE+K+DL   K E KR+TS   + AAR+ELLE+GMAD   ASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
            R+ MS ER+ ++ +R+ +SRRTM+ETEE+GVSILQDLH QR++LL++H+          
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHE---------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDD I KSK++L  M+RR+++NKW +G++I  L+  I +ILY KL
Sbjct: 181 --TLHGVDDNIGKSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-20
Identity = 71/225 (31.56%), Postives = 123/225 (54.67%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K         ++K Q ++ ++  L+EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
            + P  + M   ++R YK ++GKL+ +FKR     +D+  R ELL     DA  +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDE-VRNELL----GDAGNSSENQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
             +  + ER+ +S  R+    +  +ETE++G  +L++L   RE + ++  R         
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIIL 226
              L   D  + KS R+L  M RRI +N+ I+  ++G++V++ IL
Sbjct: 181 ---LRDADANLGKSSRILTGMLRRIIQNR-ILLVILGIIVVIAIL 207

[Close]

BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 9.8e-20
Identity = 68/226 (30.09%), Postives = 123/226 (54.42%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS  FEGYE+ +  L+A ++ K         ++K Q ++ ++  L+EA  L+ +MDLE R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
            + P  + M   ++R YK ++GKL+ +FKR     +D+   E L + G      +S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGN-----SSENQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
             +  + ER+ +S  R+    +  +ETE++G  +L++L   RE + ++ +R         
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARER--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILI 227
              L   D  + KS R+L  M RRI +N+ I+  ++G++V++ IL+
Sbjct: 181 ---LRETDANLGKSSRILTGMLRRIIQNR-ILLVILGIIVVITILM 208

[Close]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL
Match: A0A1S3CFT2 (vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.1e-101
Identity = 211/231 (91.34%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRKSNSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYK DLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKTDLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR         
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILILY KL
Sbjct: 181 ---LHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL
Match: A0A0A0KLX2 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.0e-99
Identity = 208/231 (90.04%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS VFEGYERQYCELSANVSRKSNSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSTVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKA LLAKLREYKADLGKLKKEFKRLT+PNADQAAREELLESGMADAHLASADQR
Sbjct: 61  SLQPGVKATLLAKLREYKADLGKLKKEFKRLTTPNADQAAREELLESGMADAHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR         
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVII+ILY KL
Sbjct: 181 ---LHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIIIILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL
Match: A0A6J1K4T5 (vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.5e-99
Identity = 207/231 (89.61%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYKADLGKLKKEFKR TSPNA+QAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ER+TMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKR         
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              L+GVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 ---LYGVDDAIDKSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL
Match: A0A6J1FWM6 (vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 7.1e-98
Identity = 205/231 (88.74%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVF+GYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYKADLGKLKKE KR TSPNA+QAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKELKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ER+TMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKR         
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              L+GVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 ---LYGVDDAIDKSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL
Match: A0A6J1CB35 (vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.4e-95
Identity = 201/231 (87.01%), Postives = 208/231 (90.04%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VFEGYERQYCELSANVSRK NSFSASDSEQK Q +SEIK SLDEADVLIRKMDLEAR
Sbjct: 1   MSQVFEGYERQYCELSANVSRKCNSFSASDSEQKQQRVSEIKASLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQP VKAMLLAKLREYK+DLGKLKKEFKRLTSPNADQAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPSVKAMLLAKLREYKSDLGKLKKEFKRLTSPNADQAAREELLESGMADTHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIER+ QS ERI ESRRTMLETE+LGVSIL+DLHQQRETLL SHKR         
Sbjct: 121 ERMTMSIERMNQSSERIAESRRTMLETEDLGVSILEDLHQQRETLLHSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSKRVL +MSRRISRNKWIVGSVIGVLVLVIILILYLKL
Sbjct: 181 ---LHGVDDAIDKSKRVLNSMSRRISRNKWIVGSVIGVLVLVIILILYLKL 219

[Close]

BLAST of Lsi04G009040 vs. NCBI nr
Match: XP_038889496.1 (vesicle transport v-SNARE 12-like [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103
Identity = 216/231 (93.51%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRKSNSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR         
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSK+VLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL
Sbjct: 181 ---LHGVDDAIDKSKKVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 219

[Close]

BLAST of Lsi04G009040 vs. NCBI nr
Match: XP_008461698.1 (PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 6.4e-101
Identity = 211/231 (91.34%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRKSNSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYK DLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKTDLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR         
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILILY KL
Sbjct: 181 ---LHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIILILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. NCBI nr
Match: XP_004147677.1 (vesicle transport v-SNARE 12 [Cucumis sativus] >KGN50573.1 hypothetical protein Csa_021465 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 2.1e-99
Identity = 208/231 (90.04%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS VFEGYERQYCELSANVSRKSNSF+ASDSEQK QWLSEIKVSLDEA+VLIRKMDLEAR
Sbjct: 1   MSTVFEGYERQYCELSANVSRKSNSFAASDSEQKQQWLSEIKVSLDEAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKA LLAKLREYKADLGKLKKEFKRLT+PNADQAAREELLESGMADAHLASADQR
Sbjct: 61  SLQPGVKATLLAKLREYKADLGKLKKEFKRLTTPNADQAAREELLESGMADAHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ERMTMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR         
Sbjct: 121 ERMTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVII+ILY KL
Sbjct: 181 ---LHGVDDAIDKSKKVLTTMSRRISRNKWIVGSVIGVLVLVIIIILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. NCBI nr
Match: XP_022996461.1 (vesicle transport v-SNARE 12-like [Cucurbita maxima])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 207/231 (89.61%), Postives = 212/231 (91.77%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYKADLGKLKKEFKR TSPNA+QAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ER+TMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKR         
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              L+GVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 ---LYGVDDAIDKSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Lsi04G009040 vs. NCBI nr
Match: XP_023528822.1 (vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Vesicle transport v-SNARE 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.9 bits (943), Expect = 6.6e-98
Identity = 206/231 (89.18%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MSEVFEGYERQYCELSANVSRK NSFSASDSEQK QWLSEIKVSLDEADVLIRKMDLEAR
Sbjct: 1   MSEVFEGYERQYCELSANVSRKYNSFSASDSEQKQQWLSEIKVSLDEADVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           SLQPGVKAMLLAKLREYKADLGKLKKE KR TSPNA+QAAREELLESGMAD HLASADQR
Sbjct: 61  SLQPGVKAMLLAKLREYKADLGKLKKELKRFTSPNANQAAREELLESGMADTHLASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
           ER+TMSIERI QSGERITESRRTMLETEELGVSILQDLHQQRETLL SHKR         
Sbjct: 121 ERLTMSIERINQSGERITESRRTMLETEELGVSILQDLHQQRETLLHSHKR--------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              L+GVDDAIDKSK+VL TMSRRISRNKWIVGSVIGVLVLVIILI+YLKL
Sbjct: 181 ---LYGVDDAIDKSKKVLVTMSRRISRNKWIVGSVIGVLVLVIILIIYLKL 219

[Close]

BLAST of Lsi04G009040 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-70
Identity = 149/232 (64.22%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSA-SDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS+VFEGYERQYCELS N+SRK +S S  S+ E+K   ++EIK  +DEADVLIRKMDLEA
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQ 120
           RSLQP  KA+ L+KLREYK+DL +LKKEFKR++S +A  ++REEL+ESGMAD H  SADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILC 180
           R R+ MS+ER+ QS +RI ESRR MLETEE+G+SI+QDL QQR+TLL +H +        
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNK-------- 180

Query: 181 SGCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
               LHGVDDAIDKSK+VL  MSRR++RNKWI+ SVI  LVL IILI+  KL
Sbjct: 181 ----LHGVDDAIDKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of Lsi04G009040 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 238.8 bits (608), Expect = 4.3e-63
Identity = 131/231 (56.71%), Postives = 174/231 (75.32%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRKSNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEAR 60
           MS+VF+GYERQYCELSA++S+K +S  + D EQK Q LSEIK  L+ A+VLIRKMDLEAR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQR 120
           +L P +K+ LL KLRE+K+DL   K E KR+TS   + AAR+ELLE+GMAD   ASADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 ERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILCS 180
            R+ MS ER+ ++ +R+ +SRRTM+ETEE+GVSILQDLH QR++LL++H+          
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHE---------- 180

Query: 181 GCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
              LHGVDD I KSK++L  M+RR+++NKW +G++I  L+  I +ILY KL
Sbjct: 181 --TLHGVDDNIGKSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of Lsi04G009040 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-48
Identity = 104/180 (57.78%), Postives = 135/180 (75.00%), Query Frame = 0


Query: 52  IRKMDLEARSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMAD 111
           ++KMDLEAR+L P VK+ LL KLREYK+DL   K E KR+TS N +  AR+ELLE+GMAD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 AHLASADQRERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKR 171
              ASADQR R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL++H+ 
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHE- 145

Query: 172 VSFVLILCSGCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 231
                       LHGVDD + KSK++L TM+RR++RNKW +G++I VLVL II ILY KL
Sbjct: 146 -----------TLHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 193

[Close]

BLAST of Lsi04G009040 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 184.5 bits (467), Expect = 9.7e-47
Identity = 103/177 (58.19%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 55  MDLEARSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHL 114
           MDLEAR+L P VK+ LL KLREYK+DL   K E KR+TS N +  AR+ELLE+GMAD   
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 ASADQRERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSF 174
           ASADQR R+ MS + + ++ +RI +SRRT+LETEELGVSILQDLH QR++LL++H+    
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHE---- 120

Query: 175 VLILCSGCVLHGVDDAIDKSKRVLATMSRRISRNKWIVGSVIGVLVLVIILILYLKL 232
                    LHGVDD + KSK++L TM+RR++RNKW +G++I VLVL II ILY KL
Sbjct: 121 --------TLHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 165

[Close]

BLAST of Lsi04G009040 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 83/202 (41.09%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 1   MSEVFEGYERQYCELSANVSRK-SNSFSASDSEQKHQWLSEIKVSLDEADVLIRKMDLEA 60
           MS VF  Y++QY ELS N+S+K S +FS    E+K + LSEI   L+ A+ LI KMD  A
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEK-LSEITYDLENAEKLISKMDHAA 60

Query: 61  RSLQPGVKAMLLAKLREYKADLGKLKKEFKRLTSPNADQAAREELLESGMADAHLASADQ 120
            +L P +K++LL KL+E K+ L +L+ E KR TS N     REE+LE+  AD     ADQ
Sbjct: 61  SNLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQ 120

Query: 121 RERMTMSIERIYQSGERITESRRTMLETEELGVSILQDLHQQRETLLQSHKRVSFVLILC 180
           R R+  S E + ++ E I +S+R +LETE +G+SIL++L +Q+E+L  S           
Sbjct: 121 RSRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQ---------- 180

Query: 181 SGCVLHGVDDAIDKSKRVLATM 202
              +LH +DD + +S+ ++ ++
Sbjct: 181 --AMLHEIDDTVKESRSIVRSI 185

The following BLAST results are available for this feature:

BLAST of Lsi04G009040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEL5	3.0e-69	64.22	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
Q9LVP9	5.5e-63	58.44	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	6.1e-62	56.71	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
O89116	3.4e-20	31.56	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]
Q96AJ9	9.8e-20	30.09	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]

BLAST of Lsi04G009040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CFT2	3.1e-101	91.34	vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 S...	[more]
A0A0A0KLX2	1.0e-99	90.04	PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=...	[more]
A0A6J1K4T5	6.5e-99	89.61	vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE...	[more]
A0A6J1FWM6	7.1e-98	88.74	vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 ...	[more]
A0A6J1CB35	7.4e-95	87.01	vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979...	[more]

BLAST of Lsi04G009040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889496.1	4.0e-103	93.51	vesicle transport v-SNARE 12-like [Benincasa hispida]	[more]
XP_008461698.1	6.4e-101	91.34	PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo]	[more]
XP_004147677.1	2.1e-99	90.04	vesicle transport v-SNARE 12 [Cucumis sativus] >KGN50573.1 hypothetical protein ...	[more]
XP_022996461.1	1.3e-98	89.61	vesicle transport v-SNARE 12-like [Cucurbita maxima]	[more]
XP_023528822.1	6.6e-98	89.18	vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Ves...	[more]

BLAST of Lsi04G009040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26670.1	2.1e-70	64.22	Vesicle transport v-SNARE family protein	[more]
AT5G39510.1	4.3e-63	56.71	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	8.7e-48	57.78	vesicle transport V-snare 13	[more]
AT3G29100.2	9.7e-47	58.19	vesicle transport V-snare 13	[more]
AT5G39630.1	1.1e-29	41.09	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..175 e-value: 9.3E-13 score: 48.3
None	No IPR available	GENE3D	1.20.5.110		coord: 117..175 e-value: 1.4E-13 score: 52.8
None	No IPR available	PANTHER	PTHR21230:SF66	VESICLE TRANSPORT V-SNARE 12	coord: 1..231
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..231
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 128..198 e-value: 5.47875E-16 score: 67.9392
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 132..201
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 5.7E-22 score: 77.9
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..99 e-value: 5.9E-28 score: 99.0
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G009040.1	Lsi04G009040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990019	protein storage vacuole organization
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding