Lsi04G008970 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G008970
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Enzymatic polyprotein
Location	chr04: 8989358 .. 8997845 (-)
RNA-Seq Expression	Lsi04G008970
Synteny	Lsi04G008970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTATGAAGGTTAAATCTATCTTCATAAGGTATGATTCTAAGTTATAAATTTAAGCTAATATGATGTAATAAATTCGAATTGGGTATCTCTCTTATCTTTAAAAGGAATATATTTATCTCTCCTGCTTCGCTATTAGTTTGTATTCCGAAAGAAAGGCGTGTTTAACCTTAGTGATCGAATACAAAGAATACGAAGTATGATAGATATTTTAATTCCAGAAAAAGATTAAGATCGATTGATCAAAAATTCCGATTTATTATCATATTAGATTAAACCTATTACTTTTATCACACCCAATGAAGAAATTTTTAGTGGATTACTTCAGAATCTCCAGGTTCGTCCTTTCTCTCCCTACTATGTTCTCTAAACTTCTTTCTAAACTCCCGCGCGCACAGACTATAATCGACCATTCTGCTTCCCCCTCTTCTTCTCAAAATATTGATGATCCTTTAAACATCATCTCAAATTATAATTTGGCTCAAGCAGAAATTGCTAAAGTTGAAGATAAACTAAAAAACTGGACCATTCCAAAAATGGATCCAGGATTGATTTACAAAATCAATAGCTTCAACTTCTCTCAGAACAACGTCATAGTCATCACTGAGAAGAATATTGCAATGAAGGATGAATTCACGGAGGTCAGTCTTCTCCCAAAAGAATCCATAGCATGAAATGGAGACAAATTCAAATACATCCACAAAGGATGTGTTCAAGTTGCTCTAAAACCTTTGTTCAGAGAAGGGTTAGACATTCCCGTCTACCTCGCCCTCAGGGATAAGAGACACCTTCGATTCTCACACTCTATACTAGGAATCGTTCAATCCAACTGTGAAAGAGGATCTGTTTACTTCTCTTGTAAACCCGGCTTCACAGTTTCTCTCCAAGACGCAAATCTTCGAGACGTTCTCAGTCTTGATGTTCATTCTCAAGGACTCGAGCTGAAAGATGGATCTTTTCCTTTTGCAGTTTGCTATCGAGTCTACTACAAATTAATGCATACTATTGTATCTCCAAAAGCCTTAGGAATATCTCCTAAAGGAAGTACCATGTTGATGGAAGTCAATAATGAGAAATCCTCTATGACTGTCCCTCGACTTCTCCAGTGAAATGAGCTAACACAAAATCCAGTCTGGAGAATACCAAGAATAAATACTCCTGTTGTAAAGTAAAGTGAAGATGCTACAATCACCAAGCATAACAACGGAGATGTAGAAATTCAGTTTCACCTCGAAACGAGTTACCCACAAGTCCAAGAAATCATGAATAGCAGACCCAGCGTCTCTACAAATCAACGACCATCAAGTCATATTGCCAGATCTATCCCTAGATCCAGGTCGATGAGAACATCGGTTGATTTTGAACAAATCATTCCAGATATTCATTATGAGAAGAATGAAGGTTCCTTGTCTCCTACACAATCAGACATGGAGAGGAGATCAGAACCCATCTACAATCAAATCAATGTTCTCTCAAGTGAAACGCCCGAACAAGGATACGAGCGTAAATACATTATATATATGGATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATCAACACCTAAAGAAGAACGAGGAAAATTTATCCTCAAAGATGACTTCTTTGAAAATTGCAGAAGAAGAGATGCAGAAAGGCTTGCTGAGAGGCTTGCCAAAGGTAAGTGCCAGATGATTAAGCGTGGAACTACATGGATTACAACCAGTGGAAAAGAAATTTCTGCTGACTATCCATCGGAGGAAGAATCCTACTTTCCTCATCCAATCGTTCCGGTTATCAAAATGGTCTCTTCGCTATACAAGACAATTGACGAAGACAAAGTTTCAAAAGTTGGAGTTCGTGAAATAAAAAGCATCCAACATCAACTCAATTACTCAAATAAAGTTCTAACGACGCTCTCCCAATCTGTTGAAAAGATGAAGGAGCAAAAGGTCAATATTGATACTAGTATCAAGGGAATCCCCAAGATTGATCCCAATCGACCAATCTTTCAACCAAATACCTTCCCCATCGAAAGATTGAAGGATAATTCGGAAGAGCTCCTTGCTGAGATCAACAAGAAGCTTTCGACTTTCAAAATAGAGGAAGGAGAATCCTCAAAAGCAAATGCCCCCAAAGGCGTCAATACTATTAAGAAAACCACTGAAACTATCGAATCTCAAAACATTCTTCCTGTAATCTCCTACAGTTCAGAAATGAAGAATCACTATTCAAAACCCTCTCCCCCTGATTTGGGATGGGATGATTACAAACCCGATCAAAAGACTTATGACAAAAGTTCGGTCATAAGCTGGAACATTGATGGATGTTCAGACCAGTAGATGATGAATATCTTCCAAGAAATGTTTCTAGCCGCTACTATCTACAACACTAGAAAACCATTCTTAGCACCGCACACATCTTGATTTCTGGCTTCACGGGAAATCTAAGAAGTTGGTGGCACAATCAGCTCTCAGAACAAGAGAGACAATCTATCCTAACTGCAACCAAAGCAGTTATAGTCAAGCAAGAGGGAAGTCCAACTACAGGCGTTGCCCCAATGGAAGTAACGCAAAACGAACCAGACATGGTCAATCAACTTGTGTACACCCTAATGAAACATTTCGCGGGACGTACAACAGTTTATTCTAACCAAGCCACAGGGACTCTCCTAAAAATGAGATGCCGAAAGATGAGCGATTTCAAATGGTATAAAGACATCTTGATGGCTCATCTTTAAAACCTCACTTCCTGCGGAGACGAAATTTGGAAACGAAAATTTGTGGAAGGATTACCACCCTATATTGCAGAGAAGTTTTATCAAAAGATGTCCGAAAGTTTTGAAGGAGGACAGATTAATTGGAATGCCCTCACATACAGAGACATCACCAGCAATATCCAGACGTTATGCTTGAATCTTTGTAAAGACAATAAGCATAACCAAAGAGTTATCAAACATGCAGATTACAGAAAGGAACTAGGAACTTTCTGTAAGCAATATGGCGTTGAGCAAGAATTACCGCCATCAAAGAAAAAAAAATCATCCAAAAAACCTTTTAGCAGAAGCAAAAGAAGGCAGCAAGATGATGAAAAACCTCGAAAGAGGAAGTATTACAACAGAAGTAAGAAGTATTCCAAGAAAAAAGAAACTACTTGCTTCCGATGTAACAAGCAGGGACATTATGCCAACAGATGCCCCTTGACAAAAAAGGTCAATAGTCTAGAAATCGACGATGACCTAAAGCAATCTCTTCTCTTTGCTATTCGCGAGAAAGAAGAAGAAGAAATGTCAATCTCAGAAGATTCTTCTACTGAAAAAGGACTTGTCAATGAAGTAGTAGAAGATTCATCCTCCGAGGCAGAATCTTCTGACTCCTAATACTCAGATGATGCAATCCCATGCACCAACTGTATAAATGTTCTAACAAGAGACCAAGAACACATGCTTGATCTCATAGAAGAACTTCCAGACGAAGCCTCCCGAAGGACTACCCTTCTTAAGCTTCGTAATTCTCTAGAAGAGCAAAAGACGAAAGCTCAAGAATTCGAGCCAATACAATATTCCTTTCAAGAAATATTGAATAGAATCAACAATGAATCCATTCAAGAACCAGTGAAGATAACTGATCTTCACACCGAAGTCAAGAGACTCAAACACGAAGTTGCAATCAACAAGCAACGACTTTACAATTTGGAAAATGCTTTCAGCCAGTTCCAAAAACAATCCAAAGAAGCTATTATTCTGGGTGAAACTTCTGGAAGCCTGGCAGAAAAATCAGAAGGAATCAATTATATCAGCAAAGTTCTTAATCAAAAATGGTTATCAAGAGTCACCATTAAAATTCAGAAATTCAAATTCGAGGCTATTGCCTTAATAGATTCTGGAGCTGATCAGAATGTTATCCAAGAAGGATTAATCCCTTCAAGGTATTTTGAGAAGACAATGGAAGTCCTAAGAGGAGCCAACAATCAACGTCTTCATATCAATTATAAATTACCAAAAGTGCACATTTGCAAAGGTAATTTATGTTTTATTAACACCTTCCTACTCGTCAGAGACCTTTCAGAGGAAGTCATTATGGGGACACCATTCCTCACGCAATTATACCCATTTCAAGTTTCTGAGAAAGGGCTTTTCACTCAGAAATTTGGAAAGACAATTACTTTCGAGTTTTGCCAACAAGTAACTCCAAAGTTTATTTCAAACATAGAAGAAGAAATTCAACAGTCTATCTACAGAATTTCTAAAAAGGAGAAACAAATAGAGTTTCTTCAAGACGATATCAAGAGCACTAAGGTATCTCACTATCTTAACAGACCTTCTGTTCAAATCAAAATAAAAAATTTACTCAAAAGAATGGAAGCTGAAATATGCTCGGAAGTTCCCAATGCTTTTTGGGACCACAAGGGCATAACGTAGACTTACCCTACATTGATACATTTGATGAAGCCCAAATACCTACAAAGGCCAGACCCATCCAAATGTCTAAGGAATTAATGAAAGTCTGCAAGACAGAAATTGACAGACTACTCCAAAAGGGCCTAATAAGCCCATCAAAAAGCCCGTGGTCTTGCGCGGCCTTTTACGTCAACAATCAGGCCGAAAAAGAGTGAGGGGTCCCAAGGCTTGTCATCAACTACAAACCTTTGAACAAGGTTCTCAAATGGATTAGGTACCCAATTCCTATCGACAAGATTTGCTTAAGAGGATTACTCAGGCAAAAATATTCTCAAAATTCGATATGAAATCTGGGTTTTGGCATATTCAAATATCTTCAAAAGACCGATACAAGACAACGTTTAACGTACCATTCGATCAATATCAATGGAACGTTATGCCATTCGGCTTAAAGAACGCTCCATCTGAATTTCAAAAGGTCATGAATGATCTGTTCAACAAATATCAAGACTTCACTATAGTCTATATAGATGATGTTGTAGTATTCTCAAATTCTGTTGATCAACACTTCAAACATCTACATGTGTTTTTCAATATCATCAAAACAAATGGTCTTGTGGTTTCATTACCGAAGATTAAATTATTTCAGACAAAGATTAGATTTCTTGGTTACGACATTAATCAAGGAATTATCAAACCGATCTAAATGTCATTACACTTTGTAGATAAGTTTCCAGATACTATTCAAGACAAGATGCAGCTACAGAGATTTCTTGGATGCGTGAATTATATTGGAGACTTTATTAAAGATCTCCGCATTATTTGTCTGCCACTATATGACAGACTATAAAGAATCCAAAGCCATGGACGGACGAACACACTCGAGCGGTCCAATCAATTAAAGCATTAGCCAAAGGAATCACATGCCTGTCGCTAATGAATGAAAAAGCTTATCCGATTGTAGAAATCGATGCATCTGACAACGGTTACTGCGGCATTCTCAAACAGAGAATTAACTGCATAAAATCCCTAGTTCGTTATCATTTTGGAATATGGAATAGTGCCCAGAAAAACTATTCCACAGTAAAAAAGGAGGTATTGGCAATAGTAAATTGCGTTCAAAAGTTTCAAGGAGATCTTGTTAACAAAGATTTTCTGATACGAACAGACTCAAAAGCAAGTAAATACATTTTTGAAAAAGATGTAATGAATCTTATCTCAAAACAAATCTTTGCAATATGGCAGACAATCTTATCTTGCTTCGATTTCAAAATTAAGCCTATAAAAGGCACGGAAAATGCTCTTGCAGATTATCTAAGCAGAGAGCACCTCAACAAAGAACTCTCAGAAGAAATACTCCCAAAAAATTCTCTTTTGAAGTCCTCTTCCTCTTTCCTCTCAGATGGAACCTCCCGGCCGTCCGCAGCCACCAAGGCGGCCTCTGCCGCTAGAAAAAACTCAAAGTAGTTCCTCTAGAAACGCTTCAAAGGGTAAACAACTAATTCTCAATCTTCTGCACCTTCGCCCATGAGTGTAGAAAACTACGCAATGGATACAGATTTTGAAACTATGTCCAGACGTCGTCAAGGAAGCGCCTCACGCGCTTTAACCATCCAAAAGGGCAGTTCTACCATGCCACCTCAACCATCTTCAGTGTTGCTTCGCCCAGCCGGAGTACACATGTCAAACAGGAGGCCTAACCGGCCATCTTCAAGTATTCTACTAAAAAATCCCTCGTCTTTTTTCCAAGTGGTTAAGCCGAGAGTCTTTCAACCAAGGCCTCCAGTTTTAGGGTACTTAACAAAAACAACTATGGTCGACATGACCATAGAACCAGAATTCAACGGACCTTCTTTACAAGAGGTTTGTTCTCAAATTTTTCCTCACGGTTTTAATTTCTTGCCAGAGGATATTTCAAAAACCAGGAATTTCTATGTATCGTGGTAGATACTAAGTCAATGGAAATCACCCATATTCTAGATCGCACTGACCCTTCAAAGATTGTTTACTCAAAAATGAGAATTTTCAAAGTACTAACGCCATCTCATTGGAACCAAGGGATGTTCGTACAGAAGAAATTCTCAAAAAACTTCAAACCCCAGATATATACCTATCGCGATTATATGCGAGCATGGTATAATGTATTCTGGTATCAAGCTTACAACCACTCTTGGTTCGTGACATTCTGTAAGAAAGCCTACAAAATGCACTTTCCAAATTGGTTTCAAACTTGGTGGACGTATTTTGGTATTTCTGAGGAAATCTTCCCAGTAGAAATACAAAGATCGTATCACTTATTCCAAAACAACATCTACTCGTCGCCCCTTTCAAAGACGTTTAGATTCTCACTGTATTTTCAAATACCATGGATCTTTTGCTGGAATTTCCAGCTAGGACCCAATGGAAACTTCAAAGCCTTAAGCAAGGCATTAAGAATCAAATGGTGGGAAAAGTTTGATTACTCCCATCTCGAAGCATCAAAATTGAAGGACTGGTTCAAAGCCAACGTCCATCTTCAAGATCTTTCTCGCCAGGAAGACGAACAGTTTACACTGGCAAAGAATTCAATTATGAGTACATTAGCTGGAGCAGGATCACAAGCTGATTTTGCCTCAGTCCTTGCCAACCAACTTTCTGAAGGCAATAGTCAAGAAGATGCACATTCTTCAGCATCTGTTGACAATAACGAGATATCAAACGACGATGAGGATTACGATCCTTACGCCGGCTATGATCTCAACGATCCGTTATTAGATTCACAGCCACAATGA

mRNA sequence

ATGAAAATCTCCAGGTTCGTCCTTTCTCTCCCTACTATGTTCTCTAAACTTCTTTCTAAACTCCCGCGCGCACAGACTATAATCGACCATTCTGCTTCCCCCTCTTCTTCTCAAAATATTGATGATCCTTTAAACATCATCTCAAATTATAATTTGGCTCAAGCAGAAATTGCTAAAGTTGAAGATAAACTAAAAAACTGGACCATTCCAAAAATGGATCCAGGATTGATTTACAAAATCAATAGCTTCAACTTCTCTCAGAACAACGTCATATTTCACCTCGAAACGAGTTACCCACAAGTCCAAGAAATCATGAATAGCAGACCCAGCGTCTCTACAAATCAACGACCATCAAGTCATATTGCCAGATCTATCCCTAGATCCAGGTCGATGAGAACATCGGTTGATTTTGAACAAATCATTCCAGATATTCATTATGAGAAGAATGAAGGTTCCTTGTCTCCTACACAATCAGACATGGAGAGGAGATCAGAACCCATCTACAATCAAATCAATGTTCTCTCAAGTGAAACGCCCGAACAAGGATACGAGCAAGAACGAGGAAAATTTATCCTCAAAGATGACTTCTTTGAAAATTGCAGAAGAAGAGATGCAGAAAGGCTTGCTGAGAGGCTTGCCAAAGGTAAGTGCCAGATGATTAAGCGTGGAACTACATGGATTACAACCAGTGGAAAAGAAATTTCTGCTGACTATCCATCGGAGGAAGAATCCTACTTTCCTCATCCAATCGTTCCGGTTATCAAAATGGTCTCTTCGCTATACAAGACAATTGACGAAGACAAAGTTTCAAAAGTTGGAGTTCGTGAAATAAAAAGCATCCAACATCAACTCAATTACTCAAATAAAGTTCTAACGACGCTCTCCCAATCTGTTGAAAAGATGAAGGAGCAAAAGGTCAATATTGATACTAGTATCAAGGGAATCCCCAAGATTGATCCCAATCGACCAATCTTTCAACCAAATACCTTCCCCATCGAAAGATTGAAGGATAATTCGGAAGAGCTCCTTGCTGAGATCAACAAGAAGCTTTCGACTTTCAAAATAGAGGAAGGAGAATCCTCAAAAGCAAATGCCCCCAAAGGCGTCAATACTATTAAGAAAACCACTGAAACTATCGAATCTCAAAACATTCTTCCTAGAAGTTTTATCAAAAGATGTCCGAAAGTTTTGAAGGAGGACAGATTAATTGGAATGCCCTCACATACAGAGACATCACCAGCAATATCCAGACATGATGCAATCCCATGCACCAACTGTATAAATGTTCTAACAAGAGACCAAGAACACATGCTTGATCTCATAGAAGAACTTCCAGACGAAGCCTCCCGAAGGACTACCCTTCTTAAGCTTCGTAATTCTCTAGAAGAGCAAAAGACGAAAGCTCAAGAATTCGAGCCAATACAATATTCCTTTCAAGAAATATTGAATAGAATCAACAATGAATCCATTCAAGAACCAGTGAAGATAACTGATCTTCACACCGAAGTCAAGAGACTCAAACACGAAGTTGCAATCAACAAGCAACGACTTTACAATTTGGAAAATGCTTTCAGCCATCAAGAAGATGCACATTCTTCAGCATCTGTTGACAATAACGAGATATCAAACGACGATGAGGATTACGATCCTTACGCCGGCTATGATCTCAACGATCCGTTATTAGATTCACAGCCACAATGA

Coding sequence (CDS)

ATGAAAATCTCCAGGTTCGTCCTTTCTCTCCCTACTATGTTCTCTAAACTTCTTTCTAAACTCCCGCGCGCACAGACTATAATCGACCATTCTGCTTCCCCCTCTTCTTCTCAAAATATTGATGATCCTTTAAACATCATCTCAAATTATAATTTGGCTCAAGCAGAAATTGCTAAAGTTGAAGATAAACTAAAAAACTGGACCATTCCAAAAATGGATCCAGGATTGATTTACAAAATCAATAGCTTCAACTTCTCTCAGAACAACGTCATATTTCACCTCGAAACGAGTTACCCACAAGTCCAAGAAATCATGAATAGCAGACCCAGCGTCTCTACAAATCAACGACCATCAAGTCATATTGCCAGATCTATCCCTAGATCCAGGTCGATGAGAACATCGGTTGATTTTGAACAAATCATTCCAGATATTCATTATGAGAAGAATGAAGGTTCCTTGTCTCCTACACAATCAGACATGGAGAGGAGATCAGAACCCATCTACAATCAAATCAATGTTCTCTCAAGTGAAACGCCCGAACAAGGATACGAGCAAGAACGAGGAAAATTTATCCTCAAAGATGACTTCTTTGAAAATTGCAGAAGAAGAGATGCAGAAAGGCTTGCTGAGAGGCTTGCCAAAGGTAAGTGCCAGATGATTAAGCGTGGAACTACATGGATTACAACCAGTGGAAAAGAAATTTCTGCTGACTATCCATCGGAGGAAGAATCCTACTTTCCTCATCCAATCGTTCCGGTTATCAAAATGGTCTCTTCGCTATACAAGACAATTGACGAAGACAAAGTTTCAAAAGTTGGAGTTCGTGAAATAAAAAGCATCCAACATCAACTCAATTACTCAAATAAAGTTCTAACGACGCTCTCCCAATCTGTTGAAAAGATGAAGGAGCAAAAGGTCAATATTGATACTAGTATCAAGGGAATCCCCAAGATTGATCCCAATCGACCAATCTTTCAACCAAATACCTTCCCCATCGAAAGATTGAAGGATAATTCGGAAGAGCTCCTTGCTGAGATCAACAAGAAGCTTTCGACTTTCAAAATAGAGGAAGGAGAATCCTCAAAAGCAAATGCCCCCAAAGGCGTCAATACTATTAAGAAAACCACTGAAACTATCGAATCTCAAAACATTCTTCCTAGAAGTTTTATCAAAAGATGTCCGAAAGTTTTGAAGGAGGACAGATTAATTGGAATGCCCTCACATACAGAGACATCACCAGCAATATCCAGACATGATGCAATCCCATGCACCAACTGTATAAATGTTCTAACAAGAGACCAAGAACACATGCTTGATCTCATAGAAGAACTTCCAGACGAAGCCTCCCGAAGGACTACCCTTCTTAAGCTTCGTAATTCTCTAGAAGAGCAAAAGACGAAAGCTCAAGAATTCGAGCCAATACAATATTCCTTTCAAGAAATATTGAATAGAATCAACAATGAATCCATTCAAGAACCAGTGAAGATAACTGATCTTCACACCGAAGTCAAGAGACTCAAACACGAAGTTGCAATCAACAAGCAACGACTTTACAATTTGGAAAATGCTTTCAGCCATCAAGAAGATGCACATTCTTCAGCATCTGTTGACAATAACGAGATATCAAACGACGATGAGGATTACGATCCTTACGCCGGCTATGATCTCAACGATCCGTTATTAGATTCACAGCCACAATGA

Protein sequence

MKISRFVLSLPTMFSKLLSKLPRAQTIIDHSASPSSSQNIDDPLNIISNYNLAQAEIAKVEDKLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIARSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPEQGYEQERGKFILKDDFFENCRRRDAERLAERLAKGKCQMIKRGTTWITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLNYSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAEINKKLSTFKIEEGESSKANAPKGVNTIKKTTETIESQNILPRSFIKRCPKVLKEDRLIGMPSHTETSPAISRHDAIPCTNCINVLTRDQEHMLDLIEELPDEASRRTTLLKLRNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLKHEVAINKQRLYNLENAFSHQEDAHSSASVDNNEISNDDEDYDPYAGYDLNDPLLDSQPQ

Homology

[Close]

BLAST of Lsi04G008970 vs. ExPASy TrEMBL
Match: A0A5A7UX67 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001460 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.4e-83
Identity = 224/605 (37.02%), Postives = 312/605 (51.57%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP+V EIM+SRPS S+ +  +S+  
Sbjct: 268 KLQGETAPVTRSSTEASITEFPDGNVEVQFNSGLSYPRVSEIMSSRPSTSSIKSEASY-R 327

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSDMERRSEP+YNQINV+S++     
Sbjct: 328 ETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRSEPVYNQINVISNDKERFR 387

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F+   DF E      R   E LA++L A G+  MIK  T 
Sbjct: 388 EHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEALAKKLQADGQVAMIKGSTV 447

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YF HP +P IKMVSS YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 448 WVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINEDKVQKVGVREIKNIQHQLN 507

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
           ++NK L+T+S++VE+M+  +  +      IP+I+PN+PIFQP++F I  L+++  + L E
Sbjct: 508 FANKTLSTVSKAVERMENSRPPLKGKNPEIPQINPNQPIFQPSSFNIGSLREDVSDYLTE 567

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTI--------------------------KKTTE 422
           IN++L+   + +G   + +    K +N I                          KK  +
Sbjct: 568 INRRLAAISLNKGSKVAMEGQESKVINMIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKK 627

Query: 423 TIESQNILPRS----------------------------------------FIKRCP--- 482
              S+    +S                                        +  RCP   
Sbjct: 628 RYSSKKFFRKSKTKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKD 687

Query: 483 --------KVLKEDRLIGMPSHTET------------------------------SPAIS 534
                   +  K+  L  + S  +T                              S +  
Sbjct: 688 KINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSD 747

[Close]

BLAST of Lsi04G008970 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.2e-67
Identity = 148/314 (47.13%), Postives = 208/314 (66.24%), Query Frame = 0


Query: 80  INSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIARSIPRSRSMRTSVDFEQ 139
           I  F      V F+   SYP++ EIM+SR S S+ +  +S+   ++ RS S+R SVDF  
Sbjct: 284 ITEFPDGNVEVQFNTGISYPRISEIMSSRQSTSSIKTETSY-RDTLRRSESIRASVDFSH 343

Query: 140 IIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-------------QGYEQE 199
            IPD+HYEK + SLSPTQSDMERRSEP+YNQINV+S E                +   + 
Sbjct: 344 TIPDVHYEKEDRSLSPTQSDMERRSEPVYNQINVISDEKERFREHYSVYIDRWIKAPAET 403

Query: 200 RGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTTWITTSGKEISADYPSEE 259
           R  F+   DF E      R   E L ++L A G+  MIK  T W+T SGKE++++YP EE
Sbjct: 404 RKPFLTMPDFIEGMLKLERAKNEALVKKLQADGQIAMIKGSTVWVTVSGKEVASNYPPEE 463

Query: 260 ESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLNYSNKVLTTLSQSVEKMK 319
           E+YFPHP +P IKM+SS YKTI+EDKV KVGVREIK+IQHQLN++NK+L+T+S++VE+++
Sbjct: 464 EAYFPHPAIPAIKMISSPYKTINEDKVQKVGVREIKNIQHQLNFTNKILSTVSKAVERIE 523

Query: 320 EQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAEINKKLSTFKIEEGE--S 375
              + +      IP+I+PN+PIFQPN+F I +LK+++ + LAEINK+L+   + +    +
Sbjct: 524 NPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAEINKRLAAISLNKDSKAA 583

[Close]

BLAST of Lsi04G008970 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-19
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 396  VLKEDRLIGMPSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDE 455
            +L+E+           S +     AIPCT      C   INV+T+DQE +  LIE++PDE
Sbjct: 985  ILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDE 1044

Query: 456  ASRRTTLLKLRNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLK 515
             ++RT LLKL+ SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK
Sbjct: 1045 EAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLK 1104

Query: 516  HEVAINKQRLYNLENAFSHQEDAHSSASVDNNEISNDD 546
             EVA NKQRL  LENAF  Q    S    +N+E S +D
Sbjct: 1105 REVAENKQRLIYLENAF--QAFQESQVLKENSETSRND 1139

HSP 2 Score: 266.2 bits (679), Expect = 3.2e-67
Identity = 148/314 (47.13%), Postives = 208/314 (66.24%), Query Frame = 0


Query: 80  INSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIARSIPRSRSMRTSVDFEQ 139
           I  F      V F+   SYP++ EIM+SR S S+ +  +S+   ++ RS S+R SVDF  
Sbjct: 284 ITEFPDGNVEVQFNTGISYPRISEIMSSRQSTSSIKTETSY-RDTLRRSESIRASVDFSH 343

Query: 140 IIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-------------QGYEQE 199
            IPD+HYEK + SLSPTQSDMERRSEP+YNQINV+S E                +   + 
Sbjct: 344 TIPDVHYEKEDRSLSPTQSDMERRSEPVYNQINVISDEKERFREHYSVYIDQWIKAPAET 403

Query: 200 RGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTTWITTSGKEISADYPSEE 259
           R  F+   DF E      R   E L ++L A G+  MIK  T W+T SGKE++++YP EE
Sbjct: 404 RKPFLTMPDFIEGMLKLERAKNEALVKKLQADGQIAMIKGSTVWVTVSGKEVASNYPPEE 463

Query: 260 ESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLNYSNKVLTTLSQSVEKMK 319
           E+YFPHP +P IKM+SS YKTI+EDKV KVGVREIK+IQHQLN++NK+L+T+S++VE+++
Sbjct: 464 EAYFPHPAIPAIKMISSPYKTINEDKVQKVGVREIKNIQHQLNFTNKILSTVSKAVERIE 523

Query: 320 EQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAEINKKLSTFKIEEGE--S 375
              + +      IP+I+PN+PIFQPN+F I +LK+++ + LAEINK+L+   + +    +
Sbjct: 524 NPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAEINKRLAAISLNKDSKAA 583

[Close]

BLAST of Lsi04G008970 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-19
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 396  VLKEDRLIGMPSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDE 455
            +L+E+           S +     AIPCT      C   INV+T+DQE +  LIE++PDE
Sbjct: 985  ILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDE 1044

Query: 456  ASRRTTLLKLRNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLK 515
             ++RT LLKL+ SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK
Sbjct: 1045 EAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLK 1104

Query: 516  HEVAINKQRLYNLENAFSHQEDAHSSASVDNNEISNDD 546
             EVA NKQRL  LENAF  Q    S    +N+E S +D
Sbjct: 1105 REVAENKQRLIYLENAF--QAFQESQVLKENSETSRND 1139

HSP 2 Score: 264.2 bits (674), Expect = 1.2e-66
Identity = 152/331 (45.92%), Postives = 211/331 (63.75%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP++ EIM+SRPS S+ +  +S+  
Sbjct: 268 KLQGETAPVTRSSTEASITEFPDGNVEVQFNSGLSYPRISEIMSSRPSTSSIKSEASY-R 327

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSDMERRSEP+YNQINV+S++     
Sbjct: 328 ETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRSEPVYNQINVISNDKERFR 387

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F+   DF E      R   E LA++L A G+  MIK  T 
Sbjct: 388 EHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEALAKKLQADGQVAMIKGSTV 447

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YF HP +P IKMVSS YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 448 WVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINEDKVQKVGVREIKNIQHQLN 507

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
           ++NK L+T+S++VE+M+  +  +      IP+I+PN+PIFQPN+F I  L+++  + LAE
Sbjct: 508 FANKTLSTVSKAVERMENSRPPLKGKNPEIPQINPNQPIFQPNSFNIGSLREDVSDYLAE 567

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTIKK 375
           IN++L+   + +G   + +    K +N IKK
Sbjct: 568 INRRLAAISLNKGSKVAMEGQESKVINMIKK 597

[Close]

BLAST of Lsi04G008970 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.5e-19
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 346  INKKLSTFKIEEGESSKANAPKGVNTIKKTTETIESQNILPRSFIKRCPKVLKEDRLIGM 405
            +  K++   I+  E +K +    + +   TT   ES +     +I     +L+E+     
Sbjct: 944  LKDKINAMTID--EETKQSLLYAIRSDDDTTSQTESSS--EEDYI----NILQEEGSSSE 1003

Query: 406  PSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDEASRRTTLLKL 465
                  S +     AIPCT      C   INV+T+DQE + DLIE++PDE ++RT LLKL
Sbjct: 1004 EEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKL 1063

Query: 466  RNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLKHEVAINKQRL 525
            + SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK EVA NKQRL
Sbjct: 1064 KQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLKREVAENKQRL 1123

Query: 526  YNLENAFSHQEDAHSS 534
              LE AF   + + +S
Sbjct: 1124 IYLETAFQAFQGSQAS 1130

HSP 2 Score: 263.8 bits (673), Expect = 1.6e-66
Identity = 150/331 (45.32%), Postives = 211/331 (63.75%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP++ EIM+SRPS S+ +  +S+  
Sbjct: 267 KLQGETTPIKRSSTEASITEFPDGNVEVQFNTGISYPRISEIMSSRPSTSSIKTETSY-R 326

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSD ERRS+P+YNQINV+S E     
Sbjct: 327 DTLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDTERRSKPVYNQINVISDEKERFR 386

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F    DF E      R   E L ++L A G+  MIK  T 
Sbjct: 387 EHYSVYIDQWIKAPAETRKPFHTMPDFAEGMLKLERAKNEALVKKLQADGQIAMIKGSTV 446

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YFPHP +P IKM+S  YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 447 WVTASGKEVASNYPPEEEAYFPHPAIPAIKMISCPYKTINEDKVQKVGVREIKNIQHQLN 506

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
            +NK+L+T+S++VE+++   + +      IP+I+PN+PIFQPN+F I +LK+++ + LAE
Sbjct: 507 ITNKILSTVSKAVERIENPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAE 566

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTIKK 375
           INK+L+   + +    +++   PKG+N IK+
Sbjct: 567 INKRLAAISLNKDSKAATEGQGPKGINMIKR 596

[Close]

BLAST of Lsi04G008970 vs. NCBI nr
Match: KAA0059217.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 320.5 bits (820), Expect = 3.0e-83
Identity = 224/605 (37.02%), Postives = 312/605 (51.57%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP+V EIM+SRPS S+ +  +S+  
Sbjct: 268 KLQGETAPVTRSSTEASITEFPDGNVEVQFNSGLSYPRVSEIMSSRPSTSSIKSEASY-R 327

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSDMERRSEP+YNQINV+S++     
Sbjct: 328 ETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRSEPVYNQINVISNDKERFR 387

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F+   DF E      R   E LA++L A G+  MIK  T 
Sbjct: 388 EHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEALAKKLQADGQVAMIKGSTV 447

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YF HP +P IKMVSS YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 448 WVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINEDKVQKVGVREIKNIQHQLN 507

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
           ++NK L+T+S++VE+M+  +  +      IP+I+PN+PIFQP++F I  L+++  + L E
Sbjct: 508 FANKTLSTVSKAVERMENSRPPLKGKNPEIPQINPNQPIFQPSSFNIGSLREDVSDYLTE 567

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTI--------------------------KKTTE 422
           IN++L+   + +G   + +    K +N I                          KK  +
Sbjct: 568 INRRLAAISLNKGSKVAMEGQESKVINMIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKK 627

Query: 423 TIESQNILPRS----------------------------------------FIKRCP--- 482
              S+    +S                                        +  RCP   
Sbjct: 628 RYSSKKFFRKSKTKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKD 687

Query: 483 --------KVLKEDRLIGMPSHTET------------------------------SPAIS 534
                   +  K+  L  + S  +T                              S +  
Sbjct: 688 KINAMTIDEETKQSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSD 747

[Close]

BLAST of Lsi04G008970 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 266.2 bits (679), Expect = 6.6e-67
Identity = 148/314 (47.13%), Postives = 208/314 (66.24%), Query Frame = 0


Query: 80  INSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIARSIPRSRSMRTSVDFEQ 139
           I  F      V F+   SYP++ EIM+SR S S+ +  +S+   ++ RS S+R SVDF  
Sbjct: 284 ITEFPDGNVEVQFNTGISYPRISEIMSSRQSTSSIKTETSY-RDTLRRSESIRASVDFSH 343

Query: 140 IIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-------------QGYEQE 199
            IPD+HYEK + SLSPTQSDMERRSEP+YNQINV+S E                +   + 
Sbjct: 344 TIPDVHYEKEDRSLSPTQSDMERRSEPVYNQINVISDEKERFREHYSVYIDRWIKAPAET 403

Query: 200 RGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTTWITTSGKEISADYPSEE 259
           R  F+   DF E      R   E L ++L A G+  MIK  T W+T SGKE++++YP EE
Sbjct: 404 RKPFLTMPDFIEGMLKLERAKNEALVKKLQADGQIAMIKGSTVWVTVSGKEVASNYPPEE 463

Query: 260 ESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLNYSNKVLTTLSQSVEKMK 319
           E+YFPHP +P IKM+SS YKTI+EDKV KVGVREIK+IQHQLN++NK+L+T+S++VE+++
Sbjct: 464 EAYFPHPAIPAIKMISSPYKTINEDKVQKVGVREIKNIQHQLNFTNKILSTVSKAVERIE 523

Query: 320 EQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAEINKKLSTFKIEEGE--S 375
              + +      IP+I+PN+PIFQPN+F I +LK+++ + LAEINK+L+   + +    +
Sbjct: 524 NPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAEINKRLAAISLNKDSKAA 583

[Close]

BLAST of Lsi04G008970 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 5.2e-19
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 396  VLKEDRLIGMPSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDE 455
            +L+E+           S +     AIPCT      C   INV+T+DQE +  LIE++PDE
Sbjct: 985  ILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDE 1044

Query: 456  ASRRTTLLKLRNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLK 515
             ++RT LLKL+ SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK
Sbjct: 1045 EAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLK 1104

Query: 516  HEVAINKQRLYNLENAFSHQEDAHSSASVDNNEISNDD 546
             EVA NKQRL  LENAF  Q    S    +N+E S +D
Sbjct: 1105 REVAENKQRLIYLENAF--QAFQESQVLKENSETSRND 1139

HSP 2 Score: 266.2 bits (679), Expect = 6.6e-67
Identity = 148/314 (47.13%), Postives = 208/314 (66.24%), Query Frame = 0


Query: 80  INSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIARSIPRSRSMRTSVDFEQ 139
           I  F      V F+   SYP++ EIM+SR S S+ +  +S+   ++ RS S+R SVDF  
Sbjct: 284 ITEFPDGNVEVQFNTGISYPRISEIMSSRQSTSSIKTETSY-RDTLRRSESIRASVDFSH 343

Query: 140 IIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-------------QGYEQE 199
            IPD+HYEK + SLSPTQSDMERRSEP+YNQINV+S E                +   + 
Sbjct: 344 TIPDVHYEKEDRSLSPTQSDMERRSEPVYNQINVISDEKERFREHYSVYIDQWIKAPAET 403

Query: 200 RGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTTWITTSGKEISADYPSEE 259
           R  F+   DF E      R   E L ++L A G+  MIK  T W+T SGKE++++YP EE
Sbjct: 404 RKPFLTMPDFIEGMLKLERAKNEALVKKLQADGQIAMIKGSTVWVTVSGKEVASNYPPEE 463

Query: 260 ESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLNYSNKVLTTLSQSVEKMK 319
           E+YFPHP +P IKM+SS YKTI+EDKV KVGVREIK+IQHQLN++NK+L+T+S++VE+++
Sbjct: 464 EAYFPHPAIPAIKMISSPYKTINEDKVQKVGVREIKNIQHQLNFTNKILSTVSKAVERIE 523

Query: 320 EQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAEINKKLSTFKIEEGE--S 375
              + +      IP+I+PN+PIFQPN+F I +LK+++ + LAEINK+L+   + +    +
Sbjct: 524 NPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAEINKRLAAISLNKDSKAA 583

[Close]

BLAST of Lsi04G008970 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 5.2e-19
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 396  VLKEDRLIGMPSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDE 455
            +L+E+           S +     AIPCT      C   INV+T+DQE +  LIE++PDE
Sbjct: 985  ILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFYLIEQIPDE 1044

Query: 456  ASRRTTLLKLRNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLK 515
             ++RT LLKL+ SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK
Sbjct: 1045 EAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLK 1104

Query: 516  HEVAINKQRLYNLENAFSHQEDAHSSASVDNNEISNDD 546
             EVA NKQRL  LENAF  Q    S    +N+E S +D
Sbjct: 1105 REVAENKQRLIYLENAF--QAFQESQVLKENSETSRND 1139

HSP 2 Score: 264.2 bits (674), Expect = 2.5e-66
Identity = 152/331 (45.92%), Postives = 211/331 (63.75%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP++ EIM+SRPS S+ +  +S+  
Sbjct: 268 KLQGETAPVTRSSTEASITEFPDGNVEVQFNSGLSYPRISEIMSSRPSTSSIKSEASY-R 327

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSDMERRSEP+YNQINV+S++     
Sbjct: 328 ETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRSEPVYNQINVISNDKERFR 387

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F+   DF E      R   E LA++L A G+  MIK  T 
Sbjct: 388 EHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEALAKKLQADGQVAMIKGSTV 447

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YF HP +P IKMVSS YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 448 WVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINEDKVQKVGVREIKNIQHQLN 507

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
           ++NK L+T+S++VE+M+  +  +      IP+I+PN+PIFQPN+F I  L+++  + LAE
Sbjct: 508 FANKTLSTVSKAVERMENSRPPLKGKNPEIPQINPNQPIFQPNSFNIGSLREDVSDYLAE 567

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTIKK 375
           IN++L+   + +G   + +    K +N IKK
Sbjct: 568 INRRLAAISLNKGSKVAMEGQESKVINMIKK 597

[Close]

BLAST of Lsi04G008970 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-18
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 346  INKKLSTFKIEEGESSKANAPKGVNTIKKTTETIESQNILPRSFIKRCPKVLKEDRLIGM 405
            +  K++   I+  E +K +    + +   TT   ES +     +I     +L+E+     
Sbjct: 944  LKDKINAMTID--EETKQSLLYAIRSDDDTTSQTESSS--EEDYI----NILQEEGSSSE 1003

Query: 406  PSHTETSPAISRHDAIPCT-----NC---INVLTRDQEHMLDLIEELPDEASRRTTLLKL 465
                  S +     AIPCT      C   INV+T+DQE + DLIE++PDE ++RT LLKL
Sbjct: 1004 EEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKL 1063

Query: 466  RNSLEEQKTKAQEFEPIQYSFQEILNRINNESIQEPVKITDLHTEVKRLKHEVAINKQRL 525
            + SLEEQ  +     PI YS+Q+ILNR+  E+ + P+++ DLH EVK LK EVA NKQRL
Sbjct: 1064 KQSLEEQAPQKAIQNPIMYSYQDILNRVKGEA-KMPIQVEDLHHEVKTLKREVAENKQRL 1123

Query: 526  YNLENAFSHQEDAHSS 534
              LE AF   + + +S
Sbjct: 1124 IYLETAFQAFQGSQAS 1130

HSP 2 Score: 263.8 bits (673), Expect = 3.3e-66
Identity = 150/331 (45.32%), Postives = 211/331 (63.75%), Query Frame = 0


Query: 63  KLKNWTIPKMDPGLIYKINSFNFSQNNVIFHLETSYPQVQEIMNSRPSVSTNQRPSSHIA 122
           KL+  T P         I  F      V F+   SYP++ EIM+SRPS S+ +  +S+  
Sbjct: 267 KLQGETTPIKRSSTEASITEFPDGNVEVQFNTGISYPRISEIMSSRPSTSSIKTETSY-R 326

Query: 123 RSIPRSRSMRTSVDFEQIIPDIHYEKNEGSLSPTQSDMERRSEPIYNQINVLSSETPE-- 182
            ++ RS S+R SVDF   IPD+HYEK +GSLSPTQSD ERRS+P+YNQINV+S E     
Sbjct: 327 DTLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDTERRSKPVYNQINVISDEKERFR 386

Query: 183 -----------QGYEQERGKFILKDDFFE---NCRRRDAERLAERL-AKGKCQMIKRGTT 242
                      +   + R  F    DF E      R   E L ++L A G+  MIK  T 
Sbjct: 387 EHYSVYIDQWIKAPAETRKPFHTMPDFAEGMLKLERAKNEALVKKLQADGQIAMIKGSTV 446

Query: 243 WITTSGKEISADYPSEEESYFPHPIVPVIKMVSSLYKTIDEDKVSKVGVREIKSIQHQLN 302
           W+T SGKE++++YP EEE+YFPHP +P IKM+S  YKTI+EDKV KVGVREIK+IQHQLN
Sbjct: 447 WVTASGKEVASNYPPEEEAYFPHPAIPAIKMISCPYKTINEDKVQKVGVREIKNIQHQLN 506

Query: 303 YSNKVLTTLSQSVEKMKEQKVNIDTSIKGIPKIDPNRPIFQPNTFPIERLKDNSEELLAE 362
            +NK+L+T+S++VE+++   + +      IP+I+PN+PIFQPN+F I +LK+++ + LAE
Sbjct: 507 ITNKILSTVSKAVERIENPGLPLKNKNPKIPQINPNQPIFQPNSFNIGKLKEDASDYLAE 566

Query: 363 INKKLSTFKIEEGE--SSKANAPKGVNTIKK 375
           INK+L+   + +    +++   PKG+N IK+
Sbjct: 567 INKRLAAISLNKDSKAATEGQGPKGINMIKR 596

The following BLAST results are available for this feature:

BLAST of Lsi04G008970 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G008970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UX67	1.4e-83	37.02	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BG41	3.2e-67	47.13	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5D3BG41	2.5e-19	44.94	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	2.5e-19	44.94	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5D3BEY3	9.5e-19	38.27	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]

BLAST of Lsi04G008970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059217.1	3.0e-83	37.02	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	6.6e-67	47.13	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98087.1	5.2e-19	44.94	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	5.2e-19	44.94	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYJ97599.1	2.0e-18	38.27	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Lsi04G008970 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 332..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 529..566
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 79..177 coord: 417..526
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 79..177
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 417..526

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G008970.1	Lsi04G008970.1	mRNA