Homology
BLAST of Lsi04G008130 vs. ExPASy Swiss-Prot
Match:
Q9ZVX5 (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX=3702 GN=At2g16880 PE=2 SV=1)
HSP 1 Score: 757.7 bits (1955), Expect = 1.4e-217
Identity = 383/727 (52.68%), Postives = 530/727 (72.90%), Query Frame = 0
Query: 18 EQELIQTITTILNSTKAP-LSALAPYAAHLSPSLISSIFASKALSSHPSVLLSLFKWAQK 77
E +L++T+T+IL S K L L PY ++ L++S+ +S +L+ P L+S F+WAQ
Sbjct: 8 ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67
Query: 78 HVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFI-ASDRQHELHRLILHPSRGL 137
+P + P++S L++++ SL SH+KF+DAKSLLVS+I SD L +LHP+ L
Sbjct: 68 SIP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL 127
Query: 138 -PRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSI 197
P PSKAL D ++ AY+ GKP +A QIF+KM R +PNLLTCNTLL LVRYPSS SI
Sbjct: 128 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 187
Query: 198 LLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKM-SEFGCVPDNVSYNT 257
+REVF+D +K+ + N +FN+L+ GYCLEGK +DAL ++ +M SEF PDNV+YNT
Sbjct: 188 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 247
Query: 258 ILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNN 317
IL A+ KKGRL + ++LLLDMK GL+PN+ TYN LV GYCKLG LKEA +++ELM Q N
Sbjct: 248 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 307
Query: 318 LLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAY 377
+LPD+ TYN+LI+G CN G + E L D M+ +K+ PDVVTYNTLIDGCFE S EA
Sbjct: 308 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 367
Query: 378 SLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKM-EENGFSPDCVTYNTLINA 437
L+E+M+ GVK N VT+NI LKW+CKE T V ++ + +GFSPD VTY+TLI A
Sbjct: 368 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 427
Query: 438 YCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSASKRGYILD 497
Y K G + A MM EM KG+K+ T TLNTIL +LC E+KLDEA++LL SA KRG+I+D
Sbjct: 428 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 487
Query: 498 EVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLN 557
EV+YGTLIMG+F++EK +AL +WDEMK+ +I P++ T+NS+IGGLC GKT+ A++K +
Sbjct: 488 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 547
Query: 558 ELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREG 617
EL E+GL+PD++T+N +I GYC EG VEKAF+F+N+ I++ FKPD +TCNILL GLC+EG
Sbjct: 548 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 607
Query: 618 MLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYN 677
M EKAL FNT + + ++VD VTYNT+IS+ CK+ K++ AYDLL+EMEEK L PD++TYN
Sbjct: 608 MTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 667
Query: 678 AILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSEHIDSKSMAYSDQ 737
+ + L + G++ E +E + K ++++++ +N TSE E ++++++AYSD
Sbjct: 668 SFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDV 727
Query: 738 INELCNQ 740
I+ELC++
Sbjct: 728 IDELCSR 731
BLAST of Lsi04G008130 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 320.5 bits (820), Expect = 5.8e-86
Identity = 199/676 (29.44%), Postives = 328/676 (48.52%), Query Frame = 0
Query: 43 AAHLSPSLISSIFASKALSSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSH 102
+A+ +P S++ + +++L WA H +L L L
Sbjct: 43 SANFTPEAASNLLLKS--QNDQALILKFLNWANPH-------QFFTLRCKCITLHILTKF 102
Query: 103 NKFSDAKSLLVSFIASDRQHELHRLI---LHPSRGLPRPSKALMDTSIGAYVQMGKPLLA 162
+ A+ L A E L+ L + L + ++ D + +Y ++ A
Sbjct: 103 KLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 162
Query: 163 AQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNIL 222
I + + P +L+ N +L++ +R S +I + VF++ ++ ++ PN ++NIL
Sbjct: 163 LSIVHLAQAHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNIL 222
Query: 223 IYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGL 282
I G+C G AL L +KM GC+P+ V+YNT++D CK ++ + LL M KGL
Sbjct: 223 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 282
Query: 283 LPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFR 342
PN +YN++++G C+ G +KE + V+ M + D TYN LI G+C +G +A
Sbjct: 283 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 342
Query: 343 LRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMC 402
+ EM + + P V+TY +LI + + A +++M +G+ N TY ++
Sbjct: 343 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 402
Query: 403 KEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTC 462
++G MNEA + +M +NGFSP VTYN LIN +C GKM +A ++++M KGL
Sbjct: 403 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS---- 462
Query: 463 TLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEM 522
D VSY T++ G+ + + AL + EM
Sbjct: 463 -------------------------------PDVVSYSTVLSGFCRSYDVDEALRVKREM 522
Query: 523 KERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNV 582
E+ I P +TY+S+I G C+ +T +A D E+L GL PDE TY +I+ YC EG++
Sbjct: 523 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 582
Query: 583 EKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKA----LKLF-----------NTW 642
EKA Q HN+M+E PDV T ++L+ GL ++ +A LKLF +T
Sbjct: 583 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 642
Query: 643 VSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRI 701
+ +++ + +LI C +G + A + M K PD YN ++ AG I
Sbjct: 643 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 672
BLAST of Lsi04G008130 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 1.6e-83
Identity = 167/553 (30.20%), Postives = 296/553 (53.53%), Query Frame = 0
Query: 150 YVQMGKPLLAAQIFKKMKR-FNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLR 209
Y + G P ++ +M+ ++ P + N +L LV S N ++ VF D + +
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV---SGNCHKVAANVFYDMLSRK 215
Query: 210 LVPNANSFNILIYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEAR 269
+ P +F +++ +C + AL L+ M++ GCVP++V Y T++ +L K R+ EA
Sbjct: 216 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 275
Query: 270 DLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGF 329
LL +M G +P+ T+N ++ G CK + EA K++ M PD TY L++G
Sbjct: 276 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 335
Query: 330 CNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEM-DKKGVKCN 389
C G++D A L + K P++V +NTLI G +A +++ +M G+ +
Sbjct: 336 CKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 395
Query: 390 AVTYNIMLKWMCKEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMD 449
TYN ++ KEG + A +H M G P+ +Y L++ +CK GK+ EA+ +++
Sbjct: 396 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 455
Query: 450 EMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDE 509
EM++ GLK T N ++ + C E ++ EA ++ ++G D ++ +LI G + +
Sbjct: 456 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 515
Query: 510 KANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYN 569
+ AL L +M ++ + VTYN++I + G+ +A +NE++ G DE TYN
Sbjct: 516 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 575
Query: 570 IVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSK 629
+I G C G V+KA KM+ + P +CNIL+ GLCR GM+E+A++ V +
Sbjct: 576 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 635
Query: 630 GKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEA 689
G D+VT+N+LI+ LC+ G+IE+ + +++ + + PD T+N ++ L G + +A
Sbjct: 636 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 695
Query: 690 EEFMLKMVESGIL 701
+ + +E G +
Sbjct: 696 CLLLDEGIEDGFV 701
BLAST of Lsi04G008130 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 312.0 bits (798), Expect = 2.1e-83
Identity = 218/718 (30.36%), Postives = 339/718 (47.21%), Query Frame = 0
Query: 29 LNSTKAPLSALAPYAAHLSPSLISSIFASKALSSHP--SVLLSLFKWAQKHVPSFSSPPN 88
L + +S +P++A LS + + + +L S P S L LF A K P+FS P
Sbjct: 29 LTPPSSTISFASPHSAALSSTDVKLL---DSLRSQPDDSAALRLFNLASKK-PNFSPEPA 88
Query: 89 NSLSSLLTLLPSLFSHNKFSDAKSLL---------------VSFIASDRQHELHRLILH- 148
LL L S F D K +L + I S Q EL IL
Sbjct: 89 LYEEILLRLGRS----GSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 148
Query: 149 -----PSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNTLLNSL 208
GL +P + + V L KM + +P++ T N L+ +L
Sbjct: 149 VDWMIDEFGL-KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 208
Query: 209 VRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMSEFGCV 268
R +L + ED LVP+ +F ++ GY EG AL + +M EFGC
Sbjct: 209 CRAHQLRPAIL---MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 268
Query: 269 PDNVSYNTILDALCKKGRLQEARDLLLDMKNK-GLLPNKNTYNILVSGYCKLGWLKEATK 328
NVS N I+ CK+GR+++A + + +M N+ G P++ T+N LV+G CK G +K A +
Sbjct: 269 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 328
Query: 329 VIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCF 388
++++M Q PDV+TYN +ISG C G++ EA + D+M P+ VTYNTLI
Sbjct: 329 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI---- 388
Query: 389 EWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFSPDCV 448
+CKE + EAT + G PD
Sbjct: 389 -------------------------------STLCKENQVEEATELARVLTSKGILPDVC 448
Query: 449 TYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSA 508
T+N+LI C A + +EM SKG + T N ++ SLC + KLDEA ++L
Sbjct: 449 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 508
Query: 509 SKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKT 568
G ++Y TLI G+ K K A ++DEM+ + + VTYN++I GLC+S +
Sbjct: 509 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 568
Query: 569 DQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNIL 628
+ A +++++ G PD+ TYN ++ +C G+++KA M N +PD+ T L
Sbjct: 569 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 628
Query: 629 LRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEM-EEKK 688
+ GLC+ G +E A KL + KG ++ YN +I L ++ K A +L EM E+ +
Sbjct: 629 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 688
Query: 689 LGPDQYTYNAIL-GALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 721
PD +Y + G G I+EA +F+++++E G + + + + +LT M E
Sbjct: 689 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
BLAST of Lsi04G008130 vs. ExPASy Swiss-Prot
Match:
Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 311.6 bits (797), Expect = 2.7e-83
Identity = 170/544 (31.25%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNI 218
A +F +M + P+++ N LL+++ + + ++ E ++ LR+ + S+NI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNI 123
Query: 219 LIYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKG 278
LI +C + AL ++ KM + G PD V+ +++L+ C R+ EA L+ M
Sbjct: 124 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 183
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD++TY +++G C G ID A
Sbjct: 184 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 243
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +MEK K+ DVV Y T+ID ++ ++A +L EMD KG++ N VTYN +++ +
Sbjct: 244 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 303
Query: 399 CKEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 459 CTLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + L+ E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 423
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGN 578
M +R ++ + VTYN++I GL Q+G D A +++ +G+ PD TY+I++ G C G
Sbjct: 424 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 483
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNT 638
+EKA + ++ +PD++T NI++ G+C+ G +E LF + KG +V+ Y T
Sbjct: 484 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 543
Query: 639 LISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ TYN ++ A G + E + +M G
Sbjct: 544 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 603
Query: 699 ILHD 703
+ D
Sbjct: 604 FVGD 604
BLAST of Lsi04G008130 vs. ExPASy TrEMBL
Match:
A0A6J1CB67 (pentatricopeptide repeat-containing protein At2g16880 OS=Momordica charantia OX=3673 GN=LOC111010061 PE=4 SV=1)
HSP 1 Score: 1365.5 bits (3533), Expect = 0.0e+00
Identity = 675/745 (90.60%), Postives = 706/745 (94.77%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METP+T NQ+ EN+ +ELIQTITTIL S++APLSAL PYAAHLSPSLI SIF+S+ L
Sbjct: 1 METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
+S PSVLLS FKWAQKHVP+FSSPPNNSL+SLLTLLPSLFSHNKFSDAKSLLVSFIASDR
Sbjct: 61 NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QH LHRLILHPSRGLPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYR NLLTCNT
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPSSNSILLSREVF+DSIKL +VPN NSFNILIYGYCLE +FKDALDLVNKM
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLYEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
+ATKVIELMTQNNLLPDVWTYNMLISGF NDGKID+AFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 DATKVIELMTQNNLLPDVWTYNMLISGFVNDGKIDDAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEA +LIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEANNLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK GKMGEAFR MDEMT KGLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKVGKMGEAFRAMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYGTLIMGYFKDEKANRAL+LWDEMKERQIIPSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALSLWDEMKERQIIPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQAIDKLNELLE+GLVPDETTYNI+IHGYCWEGNVEKAFQFHNKMIENLFKPDVFT
Sbjct: 541 SRKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILLRGLCREGMLEKALKLFNTWVSKGKD+DVVTYNTLISSLCK GK +NAY+LLTEME
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKAGKFDNAYELLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHD+++KLDKG NV TSE+SE
Sbjct: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDRSLKLDKGHNVPTSEISE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
H DSKSM YSDQINELCNQ K + A
Sbjct: 721 HSDSKSMDYSDQINELCNQQKYKDA 745
BLAST of Lsi04G008130 vs. ExPASy TrEMBL
Match:
A0A6J1J3F6 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita maxima OX=3661 GN=LOC111482294 PE=4 SV=1)
HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 670/745 (89.93%), Postives = 703/745 (94.36%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS SNQ+P ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1 METPSISNQRP-------PELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIADDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPS NSILLSREVF+DS+KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK GKMGEAF+MMD+MT KGLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKDGKMGEAFKMMDKMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DE+SYGTLIMGYFKDEK NRAL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEISYGTLIMGYFKDEKENRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+IHGYCWEGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKL PD+YTYNAILGALTDA RI EAE+FMLKMVESG LHDQN KLDKGQ+V TSE+ E
Sbjct: 661 EKKLEPDKYTYNAILGALTDAARINEAEKFMLKMVESGKLHDQNFKLDKGQSVATSEIPE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDA 738
BLAST of Lsi04G008130 vs. ExPASy TrEMBL
Match:
A0A6J1FWH3 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita moschata OX=3662 GN=LOC111447545 PE=4 SV=1)
HSP 1 Score: 1355.1 bits (3506), Expect = 0.0e+00
Identity = 667/745 (89.53%), Postives = 704/745 (94.50%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS SNQ+P+ ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPS NSILLSREVF+DS+KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK+GKMGEAF+MMDEMT KGLKI TCTLNTILHSL GEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKSGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLSGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKANRAL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+I+GYC EGNV+KAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVQKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQN+K DKG++V TSE+ E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDA 738
BLAST of Lsi04G008130 vs. ExPASy TrEMBL
Match:
A0A1S3BD66 (pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN=LOC103488749 PE=4 SV=1)
HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 627/745 (84.16%), Postives = 675/745 (90.60%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
M+TPSTS + PT ENQEQ+LIQTITTIL+STK SALAPYAAHLSPSLISSIFAS+AL
Sbjct: 1 MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SS PSVL+ +FKWAQKHVPSFSSPP NSLSSLLTLLPSLF H F DAKSLL+SFI+SDR
Sbjct: 61 SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LP PSKALMDTSIGAYVQM +P LA QIF KMKR NYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
L+NSLVRYPSS+SILL+R+VF+DSIKL +VP+ NS NILIYGYCLE K KDALDLVNKMS
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDLVNKMS 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPD VSYNTILDAL KK L EARDLLLDM NKGLLPNK TYNILV GYC+LG LK
Sbjct: 241 EFGCVPDTVSYNTILDALFKKRLLHEARDLLLDMTNKGLLPNKRTYNILVWGYCRLGLLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIE+MT NLLP++WTYN+LI+GFCNDGKIDEAFRLRDEMEKMK+LPDVVTYNTLI
Sbjct: 301 EATKVIEIMTHKNLLPNIWTYNILINGFCNDGKIDEAFRLRDEMEKMKVLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGC E RGSSE YSLIEEMDKKGVKCNAVTYNI+LKWMCK+ NM EAT+T+ KMEENG S
Sbjct: 361 DGCSERRGSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKENMTEATTTLQKMEENGLS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLI YCKAGKMGEAFRMMDEM SKGLKI T TLNTILHSLC EKKLDEAY+L
Sbjct: 421 PDCVTYNTLIAGYCKAGKMGEAFRMMDEMISKGLKIDTWTLNTILHSLCVEKKLDEAYNL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYG LIMG+FKDEK +RALNLWDEMKERQIIPS +TYNS+I GLCQ
Sbjct: 481 LCSASKRGYILDEVSYGILIMGHFKDEKGDRALNLWDEMKERQIIPSTITYNSVIRGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQA DKLNE+LENG+VPDETTYNI+IHGYC EGNVEKAFQFHNKMIENLFKPDV+T
Sbjct: 541 STKTDQATDKLNEMLENGIVPDETTYNIIIHGYCLEGNVEKAFQFHNKMIENLFKPDVYT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
NILLRGLCREGMLEKALKLFNTWVS GK VDVVTYNT+ISSLCKEGK ENAYDLLTEME
Sbjct: 601 RNILLRGLCREGMLEKALKLFNTWVSDGKGVDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
KKLGPDQYTY I+ ALTDAGRI+EAEEF+LKMVESGI+HDQN+KL KGQNVLTSE+SE
Sbjct: 661 AKKLGPDQYTYKTIIAALTDAGRIEEAEEFILKMVESGIVHDQNLKLGKGQNVLTSEVSE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
H DSKS+AYSDQINELCNQHK + A
Sbjct: 721 HFDSKSIAYSDQINELCNQHKYKDA 745
BLAST of Lsi04G008130 vs. ExPASy TrEMBL
Match:
A0A5A7SX61 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00370 PE=4 SV=1)
HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 578/745 (77.58%), Postives = 620/745 (83.22%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
M+TPSTS + PT ENQEQ+LIQTITTIL+STK SALAPYAAHLSPSLISSIFAS+AL
Sbjct: 1 MKTPSTSYKGPTQQENQEQQLIQTITTILSSTKPSFSALAPYAAHLSPSLISSIFASEAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SS PSVL+ +FKWAQKHVPSFSSPP NSLSSLLTLLPSLF H F DAKSLL+SFI+SDR
Sbjct: 61 SSRPSVLIHVFKWAQKHVPSFSSPPINSLSSLLTLLPSLFRHYMFYDAKSLLISFISSDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LP PSKALMDTSIGAYVQM +P LA QIF KMKR NYRPNLLTC T
Sbjct: 121 QHELHKLILHPTRDLPEPSKALMDTSIGAYVQMRQPHLATQIFNKMKRLNYRPNLLTCKT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
L+NSLVRYPSS+SILL+R+VF+DSIKL +VP+ NS NILIYGYCLE K KDALDLVNKMS
Sbjct: 181 LMNSLVRYPSSSSILLARQVFKDSIKLGVVPDTNSVNILIYGYCLESKVKDALDLVNKMS 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPD VSYNTILDAL KK L EARDLLLDM NKGLLPNK TYNILV GYC+LG LK
Sbjct: 241 EFGCVPDTVSYNTILDALFKKRLLHEARDLLLDMTNKGLLPNKRTYNILVWGYCRLGLLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EAT KIDEAFRLRDEMEKMK+LPDVVTYNTLI
Sbjct: 301 EAT-----------------------------KIDEAFRLRDEMEKMKVLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGC E RGSSE + NM EAT+T+ KMEENG S
Sbjct: 361 DGCSERRGSSE-----------------------------KENMTEATTTLQKMEENGLS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLI YCKAGKMGEAFRMMDEM SKGLKI T TLNTILHSLC EKKLDEAY+L
Sbjct: 421 PDCVTYNTLIAGYCKAGKMGEAFRMMDEMISKGLKIDTWTLNTILHSLCVEKKLDEAYNL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYG LIMG+FKDEK +RALNLWDEMKERQIIPS +TYNS+I GLCQ
Sbjct: 481 LCSASKRGYILDEVSYGILIMGHFKDEKGDRALNLWDEMKERQIIPSTITYNSVIRGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQA DKLNE+LENG+VPDETTYNI+IHGYC EGNVEKAFQFHNKMIENLFKPDV+T
Sbjct: 541 STKTDQATDKLNEMLENGIVPDETTYNIIIHGYCLEGNVEKAFQFHNKMIENLFKPDVYT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
NILLRGLCREGMLEKALKLFNTWVS GK VDVVTYNT+ISSLCKEGK ENAYDLLTEME
Sbjct: 601 RNILLRGLCREGMLEKALKLFNTWVSDGKGVDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
KKLGPDQYTY I+ ALTDAGRI+EAEEF+LKMVESGI+HDQN+KL KGQNVLTSE+SE
Sbjct: 661 AKKLGPDQYTYKTIIAALTDAGRIEEAEEFILKMVESGIVHDQNLKLGKGQNVLTSEVSE 687
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
H DSKS+AYSDQINELCNQHK + A
Sbjct: 721 HFDSKSIAYSDQINELCNQHKYKDA 687
BLAST of Lsi04G008130 vs. NCBI nr
Match:
XP_022139038.1 (pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139039.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139040.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_022139041.1 pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia])
HSP 1 Score: 1365.5 bits (3533), Expect = 0.0e+00
Identity = 675/745 (90.60%), Postives = 706/745 (94.77%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METP+T NQ+ EN+ +ELIQTITTIL S++APLSAL PYAAHLSPSLI SIF+S+ L
Sbjct: 1 METPTTPNQRLMPQENRPEELIQTITTILTSSRAPLSALGPYAAHLSPSLICSIFSSRVL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
+S PSVLLS FKWAQKHVP+FSSPPNNSL+SLLTLLPSLFSHNKFSDAKSLLVSFIASDR
Sbjct: 61 NSRPSVLLSFFKWAQKHVPAFSSPPNNSLTSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QH LHRLILHPSRGLPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYR NLLTCNT
Sbjct: 121 QHNLHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRLNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPSSNSILLSREVF+DSIKL +VPN NSFNILIYGYCLE +FKDALDLVNKM
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSIKLGVVPNTNSFNILIYGYCLESRFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLYEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
+ATKVIELMTQNNLLPDVWTYNMLISGF NDGKID+AFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 DATKVIELMTQNNLLPDVWTYNMLISGFVNDGKIDDAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEA +LIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEANNLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATTTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK GKMGEAFR MDEMT KGLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKVGKMGEAFRAMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYILDEVSYGTLIMGYFKDEKANRAL+LWDEMKERQIIPSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALSLWDEMKERQIIPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
S KTDQAIDKLNELLE+GLVPDETTYNI+IHGYCWEGNVEKAFQFHNKMIENLFKPDVFT
Sbjct: 541 SRKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILLRGLCREGMLEKALKLFNTWVSKGKD+DVVTYNTLISSLCK GK +NAY+LLTEME
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKAGKFDNAYELLTEME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHD+++KLDKG NV TSE+SE
Sbjct: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDRSLKLDKGHNVPTSEISE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
H DSKSM YSDQINELCNQ K + A
Sbjct: 721 HSDSKSMDYSDQINELCNQQKYKDA 745
BLAST of Lsi04G008130 vs. NCBI nr
Match:
XP_022983777.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983785.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983794.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983803.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022983811.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima])
HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 670/745 (89.93%), Postives = 703/745 (94.36%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS SNQ+P ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1 METPSISNQRP-------PELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIADDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPS NSILLSREVF+DS+KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK GKMGEAF+MMD+MT KGLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKDGKMGEAFKMMDKMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DE+SYGTLIMGYFKDEK NRAL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEISYGTLIMGYFKDEKENRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+IHGYCWEGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIIHGYCWEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKL PD+YTYNAILGALTDA RI EAE+FMLKMVESG LHDQN KLDKGQ+V TSE+ E
Sbjct: 661 EKKLEPDKYTYNAILGALTDAARINEAEKFMLKMVESGKLHDQNFKLDKGQSVATSEIPE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDA 738
BLAST of Lsi04G008130 vs. NCBI nr
Match:
KAG6600102.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1360.9 bits (3521), Expect = 0.0e+00
Identity = 669/745 (89.80%), Postives = 704/745 (94.50%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS SNQ+P+ ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 173 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 232
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 233 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 292
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 293 QHELHNLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 352
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPS NSILLSREVF+D++KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 353 LLNSLVRYPSLNSILLSREVFKDTVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 412
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 413 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 472
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 473 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 532
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 533 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 592
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCKAGKMGEAF MMDEMT +GLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 593 PDCVTYNTLINAYCKAGKMGEAFEMMDEMTRRGLKIDTCTLNTILHSLCGEKKLDEAYKL 652
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKANRAL+LWDEMKERQI+PSIVTYNS+IGGLC
Sbjct: 653 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCM 712
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+I+GYC EGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 713 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVEKAFQFHNKMVENFFKPDVFT 772
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSKGKD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 773 CNILLCGLCREGMLEKALKLFNTWVSKGKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 832
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKLGPD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQN+K DKG++V TSE+ E
Sbjct: 833 EKKLGPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 892
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 893 HIDSKSMAYSDQINELCNQHKYKDA 910
BLAST of Lsi04G008130 vs. NCBI nr
Match:
XP_023525433.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525440.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525450.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo] >XP_023525458.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1360.5 bits (3520), Expect = 0.0e+00
Identity = 669/745 (89.80%), Postives = 706/745 (94.77%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS +NQ+P+ ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1 METPSITNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPSSNSILLSREVF+DS+KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 181 LLNSLVRYPSSNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLL+MKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLNMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCKAGKMGEAF+MMDEMT KGLKI TCTLNTILHSLCGEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKAGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLCGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKANRAL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+I+GYC EGNVEKAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVEKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQN+K DKG++V TSE+ E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDA 738
BLAST of Lsi04G008130 vs. NCBI nr
Match:
XP_022942538.1 (pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942539.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942540.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_022942542.1 pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >KAG7030775.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1355.1 bits (3506), Expect = 0.0e+00
Identity = 667/745 (89.53%), Postives = 704/745 (94.50%), Query Frame = 0
Query: 1 METPSTSNQQPTHNENQEQELIQTITTILNSTKAPLSALAPYAAHLSPSLISSIFASKAL 60
METPS SNQ+P+ ELIQTITTIL STKAPL+ALAPYAAHLSPSL+SSI +SKAL
Sbjct: 1 METPSISNQRPS-------ELIQTITTILTSTKAPLTALAPYAAHLSPSLVSSILSSKAL 60
Query: 61 SSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFIASDR 120
SSHP++LLSLFKWAQKHVPSFSSPPNNSLSSL T+LPSLFSHNKFSDAKSLLVSFIA+DR
Sbjct: 61 SSHPTILLSLFKWAQKHVPSFSSPPNNSLSSLFTILPSLFSHNKFSDAKSLLVSFIANDR 120
Query: 121 QHELHRLILHPSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNT 180
QHELH+LILHP+R LPRPSKALMDTSIGAYVQMGKP LAAQIFKKMKR NYRPNLLTCNT
Sbjct: 121 QHELHKLILHPTRDLPRPSKALMDTSIGAYVQMGKPHLAAQIFKKMKRLNYRPNLLTCNT 180
Query: 181 LLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMS 240
LLNSLVRYPS NSILLSREVF+DS+KL +V N NSFNILIYGYCLE KFKDALDLVNKM
Sbjct: 181 LLNSLVRYPSLNSILLSREVFKDSVKLGVVLNTNSFNILIYGYCLESKFKDALDLVNKMG 240
Query: 241 EFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
EFGCVPDNVSYNTILDALCKKG+L EARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK
Sbjct: 241 EFGCVPDNVSYNTILDALCKKGQLHEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLK 300
Query: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI
Sbjct: 301 EATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLI 360
Query: 361 DGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFS 420
DGCFEWRGSSEAY LIEEMDKKG+KCNA+TYNIMLKWMCKEGNMNEAT+TV KMEENGFS
Sbjct: 361 DGCFEWRGSSEAYCLIEEMDKKGLKCNAITYNIMLKWMCKEGNMNEATNTVQKMEENGFS 420
Query: 421 PDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDL 480
PDCVTYNTLINAYCK+GKMGEAF+MMDEMT KGLKI TCTLNTILHSL GEKKLDEAY L
Sbjct: 421 PDCVTYNTLINAYCKSGKMGEAFKMMDEMTRKGLKIDTCTLNTILHSLSGEKKLDEAYKL 480
Query: 481 LCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQ 540
LCSASKRGYI+DEVSYGTLIMGYFKDEKANRAL+LWDEMKERQI+PSIVTYNS+IGGLCQ
Sbjct: 481 LCSASKRGYIIDEVSYGTLIMGYFKDEKANRALSLWDEMKERQILPSIVTYNSVIGGLCQ 540
Query: 541 SGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFT 600
SGKTDQAIDKLNELLE+GLVPDETTYNI+I+GYC EGNV+KAFQFHNKM+EN FKPDVFT
Sbjct: 541 SGKTDQAIDKLNELLESGLVPDETTYNIIINGYCSEGNVQKAFQFHNKMVENFFKPDVFT 600
Query: 601 CNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEME 660
CNILL GLCREGMLEKALKLFNTWVSK KD+DVVTYNTLISSLCKEGK ENAYDLLT+ME
Sbjct: 601 CNILLCGLCREGMLEKALKLFNTWVSKAKDIDVVTYNTLISSLCKEGKFENAYDLLTDME 660
Query: 661 EKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 720
EKKL PD YTYNAILGALTDAGRI EAE+FMLKMVESG LHDQN+K DKG++V TSE+ E
Sbjct: 661 EKKLEPDNYTYNAILGALTDAGRINEAEKFMLKMVESGKLHDQNLKFDKGRSVATSELPE 720
Query: 721 HIDSKSMAYSDQINELCNQHKGEKA 746
HIDSKSMAYSDQINELCNQHK + A
Sbjct: 721 HIDSKSMAYSDQINELCNQHKYKDA 738
BLAST of Lsi04G008130 vs. TAIR 10
Match:
AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 757.7 bits (1955), Expect = 1.0e-218
Identity = 383/727 (52.68%), Postives = 530/727 (72.90%), Query Frame = 0
Query: 18 EQELIQTITTILNSTKAP-LSALAPYAAHLSPSLISSIFASKALSSHPSVLLSLFKWAQK 77
E +L++T+T+IL S K L L PY ++ L++S+ +S +L+ P L+S F+WAQ
Sbjct: 8 ESQLLKTLTSILTSEKTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQWAQT 67
Query: 78 HVPSFSSPPNNSLSSLLTLLPSLFSHNKFSDAKSLLVSFI-ASDRQHELHRLILHPSRGL 137
+P + P++S L++++ SL SH+KF+DAKSLLVS+I SD L +LHP+ L
Sbjct: 68 SIP--EAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHL 127
Query: 138 -PRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSI 197
P PSKAL D ++ AY+ GKP +A QIF+KM R +PNLLTCNTLL LVRYPSS SI
Sbjct: 128 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 187
Query: 198 LLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKM-SEFGCVPDNVSYNT 257
+REVF+D +K+ + N +FN+L+ GYCLEGK +DAL ++ +M SEF PDNV+YNT
Sbjct: 188 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 247
Query: 258 ILDALCKKGRLQEARDLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNN 317
IL A+ KKGRL + ++LLLDMK GL+PN+ TYN LV GYCKLG LKEA +++ELM Q N
Sbjct: 248 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 307
Query: 318 LLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAY 377
+LPD+ TYN+LI+G CN G + E L D M+ +K+ PDVVTYNTLIDGCFE S EA
Sbjct: 308 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 367
Query: 378 SLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKM-EENGFSPDCVTYNTLINA 437
L+E+M+ GVK N VT+NI LKW+CKE T V ++ + +GFSPD VTY+TLI A
Sbjct: 368 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 427
Query: 438 YCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSASKRGYILD 497
Y K G + A MM EM KG+K+ T TLNTIL +LC E+KLDEA++LL SA KRG+I+D
Sbjct: 428 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 487
Query: 498 EVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLN 557
EV+YGTLIMG+F++EK +AL +WDEMK+ +I P++ T+NS+IGGLC GKT+ A++K +
Sbjct: 488 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 547
Query: 558 ELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREG 617
EL E+GL+PD++T+N +I GYC EG VEKAF+F+N+ I++ FKPD +TCNILL GLC+EG
Sbjct: 548 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 607
Query: 618 MLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYN 677
M EKAL FNT + + ++VD VTYNT+IS+ CK+ K++ AYDLL+EMEEK L PD++TYN
Sbjct: 608 MTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 667
Query: 678 AILGALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSEHIDSKSMAYSDQ 737
+ + L + G++ E +E + K ++++++ +N TSE E ++++++AYSD
Sbjct: 668 SFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDV 727
Query: 738 INELCNQ 740
I+ELC++
Sbjct: 728 IDELCSR 731
BLAST of Lsi04G008130 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 320.5 bits (820), Expect = 4.1e-87
Identity = 199/676 (29.44%), Postives = 328/676 (48.52%), Query Frame = 0
Query: 43 AAHLSPSLISSIFASKALSSHPSVLLSLFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFSH 102
+A+ +P S++ + +++L WA H +L L L
Sbjct: 43 SANFTPEAASNLLLKS--QNDQALILKFLNWANPH-------QFFTLRCKCITLHILTKF 102
Query: 103 NKFSDAKSLLVSFIASDRQHELHRLI---LHPSRGLPRPSKALMDTSIGAYVQMGKPLLA 162
+ A+ L A E L+ L + L + ++ D + +Y ++ A
Sbjct: 103 KLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKA 162
Query: 163 AQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNIL 222
I + + P +L+ N +L++ +R S +I + VF++ ++ ++ PN ++NIL
Sbjct: 163 LSIVHLAQAHGFMPGVLSYNAVLDATIR--SKRNISFAENVFKEMLESQVSPNVFTYNIL 222
Query: 223 IYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKGL 282
I G+C G AL L +KM GC+P+ V+YNT++D CK ++ + LL M KGL
Sbjct: 223 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 282
Query: 283 LPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFR 342
PN +YN++++G C+ G +KE + V+ M + D TYN LI G+C +G +A
Sbjct: 283 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 342
Query: 343 LRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMC 402
+ EM + + P V+TY +LI + + A +++M +G+ N TY ++
Sbjct: 343 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 402
Query: 403 KEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTC 462
++G MNEA + +M +NGFSP VTYN LIN +C GKM +A ++++M KGL
Sbjct: 403 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS---- 462
Query: 463 TLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEM 522
D VSY T++ G+ + + AL + EM
Sbjct: 463 -------------------------------PDVVSYSTVLSGFCRSYDVDEALRVKREM 522
Query: 523 KERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNV 582
E+ I P +TY+S+I G C+ +T +A D E+L GL PDE TY +I+ YC EG++
Sbjct: 523 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 582
Query: 583 EKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKA----LKLF-----------NTW 642
EKA Q HN+M+E PDV T ++L+ GL ++ +A LKLF +T
Sbjct: 583 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 642
Query: 643 VSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRI 701
+ +++ + +LI C +G + A + M K PD YN ++ AG I
Sbjct: 643 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 672
BLAST of Lsi04G008130 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 312.4 bits (799), Expect = 1.1e-84
Identity = 167/553 (30.20%), Postives = 296/553 (53.53%), Query Frame = 0
Query: 150 YVQMGKPLLAAQIFKKMKR-FNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLR 209
Y + G P ++ +M+ ++ P + N +L LV S N ++ VF D + +
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV---SGNCHKVAANVFYDMLSRK 215
Query: 210 LVPNANSFNILIYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEAR 269
+ P +F +++ +C + AL L+ M++ GCVP++V Y T++ +L K R+ EA
Sbjct: 216 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 275
Query: 270 DLLLDMKNKGLLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGF 329
LL +M G +P+ T+N ++ G CK + EA K++ M PD TY L++G
Sbjct: 276 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 335
Query: 330 CNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEM-DKKGVKCN 389
C G++D A L + K P++V +NTLI G +A +++ +M G+ +
Sbjct: 336 CKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 395
Query: 390 AVTYNIMLKWMCKEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMD 449
TYN ++ KEG + A +H M G P+ +Y L++ +CK GK+ EA+ +++
Sbjct: 396 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 455
Query: 450 EMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDE 509
EM++ GLK T N ++ + C E ++ EA ++ ++G D ++ +LI G + +
Sbjct: 456 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 515
Query: 510 KANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYN 569
+ AL L +M ++ + VTYN++I + G+ +A +NE++ G DE TYN
Sbjct: 516 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 575
Query: 570 IVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSK 629
+I G C G V+KA KM+ + P +CNIL+ GLCR GM+E+A++ V +
Sbjct: 576 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 635
Query: 630 GKDVDVVTYNTLISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEA 689
G D+VT+N+LI+ LC+ G+IE+ + +++ + + PD T+N ++ L G + +A
Sbjct: 636 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 695
Query: 690 EEFMLKMVESGIL 701
+ + +E G +
Sbjct: 696 CLLLDEGIEDGFV 701
BLAST of Lsi04G008130 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 312.0 bits (798), Expect = 1.5e-84
Identity = 218/718 (30.36%), Postives = 339/718 (47.21%), Query Frame = 0
Query: 29 LNSTKAPLSALAPYAAHLSPSLISSIFASKALSSHP--SVLLSLFKWAQKHVPSFSSPPN 88
L + +S +P++A LS + + + +L S P S L LF A K P+FS P
Sbjct: 29 LTPPSSTISFASPHSAALSSTDVKLL---DSLRSQPDDSAALRLFNLASKK-PNFSPEPA 88
Query: 89 NSLSSLLTLLPSLFSHNKFSDAKSLL---------------VSFIASDRQHELHRLILH- 148
LL L S F D K +L + I S Q EL IL
Sbjct: 89 LYEEILLRLGRS----GSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 148
Query: 149 -----PSRGLPRPSKALMDTSIGAYVQMGKPLLAAQIFKKMKRFNYRPNLLTCNTLLNSL 208
GL +P + + V L KM + +P++ T N L+ +L
Sbjct: 149 VDWMIDEFGL-KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 208
Query: 209 VRYPSSNSILLSREVFEDSIKLRLVPNANSFNILIYGYCLEGKFKDALDLVNKMSEFGCV 268
R +L + ED LVP+ +F ++ GY EG AL + +M EFGC
Sbjct: 209 CRAHQLRPAIL---MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 268
Query: 269 PDNVSYNTILDALCKKGRLQEARDLLLDMKNK-GLLPNKNTYNILVSGYCKLGWLKEATK 328
NVS N I+ CK+GR+++A + + +M N+ G P++ T+N LV+G CK G +K A +
Sbjct: 269 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 328
Query: 329 VIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAFRLRDEMEKMKMLPDVVTYNTLIDGCF 388
++++M Q PDV+TYN +ISG C G++ EA + D+M P+ VTYNTLI
Sbjct: 329 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI---- 388
Query: 389 EWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWMCKEGNMNEATSTVHKMEENGFSPDCV 448
+CKE + EAT + G PD
Sbjct: 389 -------------------------------STLCKENQVEEATELARVLTSKGILPDVC 448
Query: 449 TYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGTCTLNTILHSLCGEKKLDEAYDLLCSA 508
T+N+LI C A + +EM SKG + T N ++ SLC + KLDEA ++L
Sbjct: 449 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 508
Query: 509 SKRGYILDEVSYGTLIMGYFKDEKANRALNLWDEMKERQIIPSIVTYNSIIGGLCQSGKT 568
G ++Y TLI G+ K K A ++DEM+ + + VTYN++I GLC+S +
Sbjct: 509 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 568
Query: 569 DQAIDKLNELLENGLVPDETTYNIVIHGYCWEGNVEKAFQFHNKMIENLFKPDVFTCNIL 628
+ A +++++ G PD+ TYN ++ +C G+++KA M N +PD+ T L
Sbjct: 569 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 628
Query: 629 LRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNTLISSLCKEGKIENAYDLLTEM-EEKK 688
+ GLC+ G +E A KL + KG ++ YN +I L ++ K A +L EM E+ +
Sbjct: 629 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 688
Query: 689 LGPDQYTYNAIL-GALTDAGRIKEAEEFMLKMVESGILHDQNIKLDKGQNVLTSEMSE 721
PD +Y + G G I+EA +F+++++E G + + + + +LT M E
Sbjct: 689 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
BLAST of Lsi04G008130 vs. TAIR 10
Match:
AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 311.6 bits (797), Expect = 1.9e-84
Identity = 170/544 (31.25%), Postives = 294/544 (54.04%), Query Frame = 0
Query: 159 AAQIFKKMKRFNYRPNLLTCNTLLNSLVRYPSSNSILLSREVFEDSIKLRLVPNANSFNI 218
A +F +M + P+++ N LL+++ + + ++ E ++ LR+ + S+NI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNI 123
Query: 219 LIYGYCLEGKFKDALDLVNKMSEFGCVPDNVSYNTILDALCKKGRLQEARDLLLDMKNKG 278
LI +C + AL ++ KM + G PD V+ +++L+ C R+ EA L+ M
Sbjct: 124 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 183
Query: 279 LLPNKNTYNILVSGYCKLGWLKEATKVIELMTQNNLLPDVWTYNMLISGFCNDGKIDEAF 338
PN T+N L+ G EA +I+ M PD++TY +++G C G ID A
Sbjct: 184 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 243
Query: 339 RLRDEMEKMKMLPDVVTYNTLIDGCFEWRGSSEAYSLIEEMDKKGVKCNAVTYNIMLKWM 398
L +MEK K+ DVV Y T+ID ++ ++A +L EMD KG++ N VTYN +++ +
Sbjct: 244 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 303
Query: 399 CKEGNMNEATSTVHKMEENGFSPDCVTYNTLINAYCKAGKMGEAFRMMDEMTSKGLKIGT 458
C G ++A+ + M E +P+ VT++ LI+A+ K GK+ EA ++ DEM + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 459 CTLNTILHSLCGEKKLDEAYDLLCSASKRGYILDEVSYGTLIMGYFKDEKANRALNLWDE 518
T +++++ C +LDEA + + + V+Y TLI G+ K ++ + L+ E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 423
Query: 519 MKERQIIPSIVTYNSIIGGLCQSGKTDQAIDKLNELLENGLVPDETTYNIVIHGYCWEGN 578
M +R ++ + VTYN++I GL Q+G D A +++ +G+ PD TY+I++ G C G
Sbjct: 424 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 483
Query: 579 VEKAFQFHNKMIENLFKPDVFTCNILLRGLCREGMLEKALKLFNTWVSKGKDVDVVTYNT 638
+EKA + ++ +PD++T NI++ G+C+ G +E LF + KG +V+ Y T
Sbjct: 484 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 543
Query: 639 LISSLCKEGKIENAYDLLTEMEEKKLGPDQYTYNAILGALTDAGRIKEAEEFMLKMVESG 698
+IS C++G E A L EM+E P+ TYN ++ A G + E + +M G
Sbjct: 544 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 603
Query: 699 ILHD 703
+ D
Sbjct: 604 FVGD 604
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9ZVX5 | 1.4e-217 | 52.68 | Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 5.8e-86 | 29.44 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9FMF6 | 1.6e-83 | 30.20 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9LFF1 | 2.1e-83 | 30.36 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9LQ14 | 2.7e-83 | 31.25 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CB67 | 0.0e+00 | 90.60 | pentatricopeptide repeat-containing protein At2g16880 OS=Momordica charantia OX=... | [more] |
A0A6J1J3F6 | 0.0e+00 | 89.93 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1FWH3 | 0.0e+00 | 89.53 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucurbita moschata OX=3... | [more] |
A0A1S3BD66 | 0.0e+00 | 84.16 | pentatricopeptide repeat-containing protein At2g16880 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5A7SX61 | 0.0e+00 | 77.58 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022139038.1 | 0.0e+00 | 90.60 | pentatricopeptide repeat-containing protein At2g16880 [Momordica charantia] >XP_... | [more] |
XP_022983777.1 | 0.0e+00 | 89.93 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita maxima] >XP_022... | [more] |
KAG6600102.1 | 0.0e+00 | 89.80 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023525433.1 | 0.0e+00 | 89.80 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita pepo subsp. pep... | [more] |
XP_022942538.1 | 0.0e+00 | 89.53 | pentatricopeptide repeat-containing protein At2g16880 [Cucurbita moschata] >XP_0... | [more] |
Match Name | E-value | Identity | Description | |
AT2G16880.1 | 1.0e-218 | 52.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 4.1e-87 | 29.44 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G64320.1 | 1.1e-84 | 30.20 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.5e-84 | 30.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62930.1 | 1.9e-84 | 31.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |