Lsi04G008070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G008070
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr04: 7675309 .. 7678209 (-)
RNA-Seq ExpressionLsi04G008070
SyntenyLsi04G008070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTAACATATAGTAACAATATTGATTATAGTTAAATAATCATATATATTGAATAATAGTTGTCTTTTAGGCTGGTTAGGATTGAGCCCATGAGATTATCAGCTGACTTGATACCATTTCATGTTAGAAATCTGTAGTATATTTAGTATTTTGAGTAGATGACCATCGTGTCATTTGATTGTGGCTTCCAACATAGTTGTATTTGATAATTTAATGCTTTTTCTTGGGTGAGTGTGAGTAATTTTAGATTTGATACATCTGATTAAATGTAGTCTACCCATTTGTTTGTAGTTCTTGGATGTTATTATTATTACTTTTTTTTTTTTTTTATAATCCGGAGTCAGAGCTTTGCTCCTCTACACCTGGAACCTCTGCCGCCCAAGGCACTCGAAGGTTCAAACTTGGAGCCTCTAAGCCGGTATGGCCAAGAGACTTCAAGCCCTTACCAATGGGGCCACCCCTTTGGGGCAGTTCTTAGGATGTTACTGTTAGCACTCTGGGATTATTACACCAAATTTTCAAAATTGTGATTTTAGTCCACAATTTGCTTTCATTAGAGTTTATGGCTGTACAAAATGGAGGGGCAAGCTTGTTTCCTTTTTAATAAACCATGGAATCTACTGATAGACCTTACTTAGACCTAGTATTCCATGAGATGTTTATATGCAATGCCTTTGAGTTACCTTTTCTATTATTTTTTATTTTTTATTGAATACATGTTCTAATTCCTATGCCCCTTTTATGGCCCAAGAAAAATTTAACTTCCCAACTTACAAGTAACAATAGTAGTGTAACTTGTTTGTATCAGAACTCTTTTCCCTGTCATCGAGCCTCCAACATCACGTGGATGATGACAATTTTCACTTCAACTTCAATTTCTACATCTTCTTTGCACAACTAAGTCGTAATTCATCCTGTAGGAAGCATTTGGATCAATTATACGTCCAGTTAATTGTGTCTGGACTACACAAGTGTGGTTTCTTGGTGATCAAATTTGTCAATGCATGCTTGCATTTCGGAGATGTTAACTACGCACACAAGGCTTTTCGTGAAGTTTTAGAACCGGATATATTGTTGTGGAATGCCATCATAAAGGGTTACACTCAGAAGAATATTGTTGCTGGTGCTATCAGAATGTATACGGATATGCAAATGTCACGGGTGCACCCTAATTGCTTCACATTTTTGTATGTGCTTAAAGCATGCGGTGGAACATTAGTTGAAGGATTAGGTAAACAGATGCATGGCCAGACATTTAAATATGGCTTTGGAACAAATGTTTTTGTGCAGAATAGTCTTGTGTCAATGTATGCTAAATTTGGTCAAACCTCATCTGCTAGGATCGTGTTTGATAAGCTGCATGATAGAACTGTTGTTTCATGGACTTCCATCATTTCTGGGTATGTTCAGAATGGTGATCCCGTGGAAGCATTGAAAGTTTTCAAAGAAATGAGGCAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTAGCGTCATGACAGCGTATACGGACGTGGAAGATTTGGGACAAGGAAAGTCCGTTCATGGTTTAGTGACTAAATCGGGTGTAGAATTTGAACCCGACATAGTGATATCACTCACTACTATGTATGCAAAACGTGGATTGGTGGAAGTTGCCAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTAATTTTGTGGAATGCTATGATTTCTGGCTATGCAAAAAATGGATATGGTGAAGAAGCAATCAAGCTATTCCGCAAGATGATTTCCAAAAATATCAGGGTTGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGGTGCCCAAGTTGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAAAGTGAGTACAGAGACGATACTTTTGTAAACACAGCCCTTATAGATATGTATGCGAAATGTGGAAGCATATATTTTGCTCGTAGTGTTTTCGATAAAATGGTCGATAAAGATGTTGTCTTATGGAGTGCAATGATTATGGGGTATGGATTACATGGTCATGGACAAGAAGCCATCAGCCTTTACAATGCAATGAAGCAAGCTGGAGTTCGTCCAAACGATGTTACTTTTGTTGGTCTTCTCACAGCTTGCAAAAATTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCGAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCATGGTCGATCTTTTAGGACGTGCAGGCTATTTGAATCAAGCTTATGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCTTGCAAGGTCCATCGCCAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGTATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACACATGTGGCTAATGTTCGATTAATGATGACACAGAAAGGACTGAATAAGGACCTCGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCATGTTGGAGATAGATCACATCCCAGATCAAAGGAAATTTTTGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTGATAATGAATCTGTTCTACATGACTTGAATCATGAGGAAATTGAGGAAAGTCTTTGTAATCACAGTGAGAGGCTAGCAGTTGCTTATGGTATCATCAGTACTGCTCCTGGAACTACACTTAGAATAACCAAGAATCTCCGAGCTTGCGTTAACTGTCATTCAGCGATAAAGCTTATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGACGCGAAACGTTTTCACCATTTCAAAGATGGAATTTGTTCATGTGGAGACTTTTGGTGA

mRNA sequence

ATGGAGCTGGTTAGGATTGAGCCCATGAGATTATCAGCTGACTTGATACCATTTCATTGTAACTTGTTTGTATCAGAACTCTTTTCCCTGTCATCGAGCCTCCAACATCACGTGGATGATGACAATTTTCACTTCAACTTCAATTTCTACATCTTCTTTGCACAACTAAGTCGTAATTCATCCTGTAGGAAGCATTTGGATCAATTATACGTCCAGTTAATTGTGTCTGGACTACACAAGTGTGGTTTCTTGGTGATCAAATTTGTCAATGCATGCTTGCATTTCGGAGATGTTAACTACGCACACAAGGCTTTTCGTGAAGTTTTAGAACCGGATATATTGTTGTGGAATGCCATCATAAAGGGTTACACTCAGAAGAATATTGTTGCTGGTGCTATCAGAATGTATACGGATATGCAAATGTCACGGGTGCACCCTAATTGCTTCACATTTTTGTATGTGCTTAAAGCATGCGGTGGAACATTAGTTGAAGGATTAGGTAAACAGATGCATGGCCAGACATTTAAATATGGCTTTGGAACAAATGTTTTTGTGCAGAATAGTCTTGTGTCAATGTATGCTAAATTTGGTCAAACCTCATCTGCTAGGATCGTGTTTGATAAGCTGCATGATAGAACTGTTGTTTCATGGACTTCCATCATTTCTGGGTATGTTCAGAATGGTGATCCCGTGGAAGCATTGAAAGTTTTCAAAGAAATGAGGCAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTAGCGTCATGACAGCGTATACGGACGTGGAAGATTTGGGACAAGGAAAGTCCGTTCATGGTTTAGTGACTAAATCGGGTGTAGAATTTGAACCCGACATAGTGATATCACTCACTACTATGTATGCAAAACGTGGATTGGTGGAAGTTGCCAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTAATTTTGTGGAATGCTATGATTTCTGGCTATGCAAAAAATGGATATGGTGAAGAAGCAATCAAGCTATTCCGCAAGATGATTTCCAAAAATATCAGGGTTGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGGTGCCCAAGTTGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAAAGTGAGTACAGAGACGATACTTTTGTAAACACAGCCCTTATAGATATGTATGCGAAATGTGGAAGCATATATTTTGCTCGTAGTGTTTTCGATAAAATGGTCGATAAAGATGTTGTCTTATGGAGTGCAATGATTATGGGGTATGGATTACATGGTCATGGACAAGAAGCCATCAGCCTTTACAATGCAATGAAGCAAGCTGGAGTTCGTCCAAACGATGTTACTTTTGTTGGTCTTCTCACAGCTTGCAAAAATTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCGAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCATGGTCGATCTTTTAGGACGTGCAGGCTATTTGAATCAAGCTTATGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCTTGCAAGGTCCATCGCCAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGTATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACACATGTGGCTAATGTTCGATTAATGATGACACAGAAAGGACTGAATAAGGACCTCGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCATGTTGGAGATAGATCACATCCCAGATCAAAGGAAATTTTTGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTGATAATGAATCTGTTCTACATGACTTGAATCATGAGGAAATTGAGGAAAGTCTTTGTAATCACAGTGAGAGGCTAGCAGTTGCTTATGGTATCATCAGTACTGCTCCTGGAACTACACTTAGAATAACCAAGAATCTCCGAGCTTGCGTTAACTGTCATTCAGCGATAAAGCTTATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGACGCGAAACGTTTTCACCATTTCAAAGATGGAATTTGTTCATGTGGAGACTTTTGGTGA

Coding sequence (CDS)

ATGGAGCTGGTTAGGATTGAGCCCATGAGATTATCAGCTGACTTGATACCATTTCATTGTAACTTGTTTGTATCAGAACTCTTTTCCCTGTCATCGAGCCTCCAACATCACGTGGATGATGACAATTTTCACTTCAACTTCAATTTCTACATCTTCTTTGCACAACTAAGTCGTAATTCATCCTGTAGGAAGCATTTGGATCAATTATACGTCCAGTTAATTGTGTCTGGACTACACAAGTGTGGTTTCTTGGTGATCAAATTTGTCAATGCATGCTTGCATTTCGGAGATGTTAACTACGCACACAAGGCTTTTCGTGAAGTTTTAGAACCGGATATATTGTTGTGGAATGCCATCATAAAGGGTTACACTCAGAAGAATATTGTTGCTGGTGCTATCAGAATGTATACGGATATGCAAATGTCACGGGTGCACCCTAATTGCTTCACATTTTTGTATGTGCTTAAAGCATGCGGTGGAACATTAGTTGAAGGATTAGGTAAACAGATGCATGGCCAGACATTTAAATATGGCTTTGGAACAAATGTTTTTGTGCAGAATAGTCTTGTGTCAATGTATGCTAAATTTGGTCAAACCTCATCTGCTAGGATCGTGTTTGATAAGCTGCATGATAGAACTGTTGTTTCATGGACTTCCATCATTTCTGGGTATGTTCAGAATGGTGATCCCGTGGAAGCATTGAAAGTTTTCAAAGAAATGAGGCAATGTAATGTAAAGCCTGATTGGATTGCCCTTGTTAGCGTCATGACAGCGTATACGGACGTGGAAGATTTGGGACAAGGAAAGTCCGTTCATGGTTTAGTGACTAAATCGGGTGTAGAATTTGAACCCGACATAGTGATATCACTCACTACTATGTATGCAAAACGTGGATTGGTGGAAGTTGCCAGATTTTTCTTTAATCAGATGGAAAAACCAAATTTAATTTTGTGGAATGCTATGATTTCTGGCTATGCAAAAAATGGATATGGTGAAGAAGCAATCAAGCTATTCCGCAAGATGATTTCCAAAAATATCAGGGTTGATTCTGTTACTGTGAGGTCTGCTATTCTAGCCGGTGCCCAAGTTGGGTCTCTTGAACTAGCAAGATGGTTGGATGGTTATATCTCTAAAAGTGAGTACAGAGACGATACTTTTGTAAACACAGCCCTTATAGATATGTATGCGAAATGTGGAAGCATATATTTTGCTCGTAGTGTTTTCGATAAAATGGTCGATAAAGATGTTGTCTTATGGAGTGCAATGATTATGGGGTATGGATTACATGGTCATGGACAAGAAGCCATCAGCCTTTACAATGCAATGAAGCAAGCTGGAGTTCGTCCAAACGATGTTACTTTTGTTGGTCTTCTCACAGCTTGCAAAAATTCAGGTCTTGTAAAAGAGGGATGGGAGCTTTTCCACCAGATGCGAGACCACGGGATTGAACCGCATCACCAGCATTACTCTTGCATGGTCGATCTTTTAGGACGTGCAGGCTATTTGAATCAAGCTTATGATTTCATTATGAGCATGCCAATTAAACCTGGAGTTAGTGTTTGGGGGGCTCTTCTGAGTGCTTGCAAGGTCCATCGCCAAGTAAGGTTGGGAGAAATTGCTGCAGAACAACTTTTCATATTAGATCCATATAATACAGGGTATTATGTGCAACTCTCAAACCTCTATGCTTCTGCCCATTTATGGACACATGTGGCTAATGTTCGATTAATGATGACACAGAAAGGACTGAATAAGGACCTCGGACATAGTTCTATCGAGATCAATGGAAATCTCGAAACGTTTCATGTTGGAGATAGATCACATCCCAGATCAAAGGAAATTTTTGAAGAGCTTGATAGATTAGAGAAAAGATTAAAAGCAGCTGGTTATGTTCCTGATAATGAATCTGTTCTACATGACTTGAATCATGAGGAAATTGAGGAAAGTCTTTGTAATCACAGTGAGAGGCTAGCAGTTGCTTATGGTATCATCAGTACTGCTCCTGGAACTACACTTAGAATAACCAAGAATCTCCGAGCTTGCGTTAACTGTCATTCAGCGATAAAGCTTATATCGAAGCTTGTCGATAGGGAAATAATTATTCGAGACGCGAAACGTTTTCACCATTTCAAAGATGGAATTTGTTCATGTGGAGACTTTTGGTGA

Protein sequence

MELVRIEPMRLSADLIPFHCNLFVSELFSLSSSLQHHVDDDNFHFNFNFYIFFAQLSRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW
Homology
[Close]
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 9.9e-244
Identity = 391/672 (58.18%), Postives = 524/672 (77.98%), Query Frame = 0 

Query: 52  FFAQLSRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEP 111
           F+A L  +++ +  L Q++ +L+V GL   GFL+ K ++A   FGD+ +A + F ++  P
Sbjct: 23  FYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP 82

Query: 112 DILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMH 171
            I  WNAII+GY++ N    A+ MY++MQ++RV P+ FTF ++LKAC G     +G+ +H
Sbjct: 83  QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 172 GQTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFD--KLHDRTVVSWTSIISGYVQNGD 231
            Q F+ GF  +VFVQN L+++YAK  +  SAR VF+   L +RT+VSWT+I+S Y QNG+
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 232 PVEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVIS 291
           P+EAL++F +MR+ +VKPDW+ALVSV+ A+T ++DL QG+S+H  V K G+E EPD++IS
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 292 LTTMYAKRGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVD 351
           L TMYAK G V  A+  F++M+ PNLILWNAMISGYAKNGY  EAI +F +MI+K++R D
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322

Query: 352 SVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFD 411
           ++++ SAI A AQVGSLE AR +  Y+ +S+YRDD F+++ALIDM+AKCGS+  AR VFD
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382

Query: 412 KMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKE 471
           + +D+DVV+WSAMI+GYGLHG  +EAISLY AM++ GV PNDVTF+GLL AC +SG+V+E
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442

Query: 472 GWELFHQMRDHGIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 531
           GW  F++M DH I P  QHY+C++DLLGRAG+L+QAY+ I  MP++PGV+VWGALLSACK
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502

Query: 532 VHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGH 591
            HR V LGE AA+QLF +DP NTG+YVQLSNLYA+A LW  VA VR+ M +KGLNKD+G 
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562

Query: 592 SSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEES 651
           S +E+ G LE F VGD+SHPR +EI  +++ +E RLK  G+V + ++ LHDLN EE EE+
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 622

Query: 652 LCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHH 711
           LC+HSER+A+AYG+IST  GT LRITKNLRACVNCH+A KLISKLVDREI++RD  RFHH
Sbjct: 623 LCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHH 682

Query: 712 FKDGICSCGDFW 722
           FKDG+CSCGD+W
Sbjct: 683 FKDGVCSCGDYW 694

[Close]
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 1.9e-154
Identity = 269/655 (41.07%), Postives = 411/655 (62.75%), Query Frame = 0 

Query: 68  QLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKGYTQKN 127
           +++  L+ SG     F +    N       VN A K F  + E D++ WN I+ GY+Q  
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215

Query: 128 IVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTNVFVQN 187
           +   A+ M   M    + P+  T + VL A     +  +GK++HG   + GF + V +  
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275

Query: 188 SLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQCNVKP 247
           +LV MYAK G   +AR +FD + +R VVSW S+I  YVQN +P EA+ +F++M    VKP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335

Query: 248 DWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVARFFF 307
             ++++  + A  D+ DL +G+ +H L  + G++    +V SL +MY K   V+ A   F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395

Query: 308 NQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQVGSLE 367
            +++   L+ WNAMI G+A+NG   +A+  F +M S+ ++ D+ T  S I A A++    
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455

Query: 368 LARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYG 427
            A+W+ G + +S    + FV TAL+DMYAKCG+I  AR +FD M ++ V  W+AMI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

Query: 428 LHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRD-HGIEPHH 487
            HG G+ A+ L+  M++  ++PN VTF+ +++AC +SGLV+ G + F+ M++ + IE   
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575

Query: 488 QHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFI 547
            HY  MVDLLGRAG LN+A+DFIM MP+KP V+V+GA+L AC++H+ V   E AAE+LF 
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635

Query: 548 LDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 607
           L+P + GY+V L+N+Y +A +W  V  VR+ M ++GL K  G S +EI   + +F  G  
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695

Query: 608 SHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGIIST 667
           +HP SK+I+  L++L   +K AGYVPD   VL  + ++  E+ L  HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755

Query: 668 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
             GTT+ + KNLR C +CH+A K IS +  REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 1.3e-150
Identity = 263/626 (42.01%), Postives = 402/626 (64.22%), Query Frame = 0 

Query: 106 REVLEPDILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEG 165
           R V + D+  WN++I    +    A A+  ++ M+   ++P   +F   +KAC       
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 166 LGKQMHGQTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYV 225
            GKQ H Q F +G+ +++FV ++L+ MY+  G+   AR VFD++  R +VSWTS+I GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 226 QNGDPVEALKVFKEM------RQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSG 285
            NG+ ++A+ +FK++          +  D + LVSV++A + V   G  +S+H  V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 286 VEFEPDIVISLTTMYAK--RGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKL 345
            +    +  +L   YAK   G V VAR  F+Q+   + + +N+++S YA++G   EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 346 FRKMI-SKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYA 405
           FR+++ +K +  +++T+ + +LA +  G+L + + +   + +    DD  V T++IDMY 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 406 KCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVG 465
           KCG +  AR  FD+M +K+V  W+AMI GYG+HGH  +A+ L+ AM  +GVRPN +TFV 
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 466 LLTACKNSGLVKEGWELFHQMRDH-GIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIK 525
           +L AC ++GL  EGW  F+ M+   G+EP  +HY CMVDLLGRAG+L +AYD I  M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 526 PGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVR 585
           P   +W +LL+AC++H+ V L EI+  +LF LD  N GYY+ LS++YA A  W  V  VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513

Query: 586 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNE 645
           ++M  +GL K  G S +E+NG +  F +GD  HP+ ++I+E L  L ++L  AGYV +  
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573

Query: 646 SVLHDLNHEEIEESLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 705
           SV HD++ EE E +L  HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 706 DREIIIRDAKRFHHFKDGICSCGDFW 722
           DRE ++RDAKRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.7e-148
Identity = 271/703 (38.55%), Postives = 412/703 (58.61%), Query Frame = 0 

Query: 56  LSRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACL---HFGDVNYAHKAFREVLEPD 115
           L  N    + L  ++ Q+I  GLH   + + K +  C+   HF  + YA   F+ + EP+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 116 ILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHG 175
           +L+WN + +G+   +    A+++Y  M    + PN +TF +VLK+C  +     G+Q+HG
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158

Query: 176 QTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFD------------------------- 235
              K G   +++V  SL+SMY + G+   A  VFD                         
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218

Query: 236 --KLHD----RTVVSWTSIISGYVQNGDPVEALKVFKEMRQCNVKPDWIALVSVMTAYTD 295
             KL D    + VVSW ++ISGY + G+  EAL++FK+M + NV+PD   +V+V++A   
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 296 VEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVARFFFNQMEKPNLILWNAM 355
              +  G+ VH  +   G      IV +L  +Y+K G +E A   F ++   ++I WN +
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 356 ISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISK--S 415
           I GY      +EA+ LF++M+      + VT+ S + A A +G++++ RW+  YI K   
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398

Query: 416 EYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLY 475
              + + + T+LIDMYAKCG I  A  VF+ ++ K +  W+AMI G+ +HG    +  L+
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458

Query: 476 NAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQM-RDHGIEPHHQHYSCMVDLLGR 535
           + M++ G++P+D+TFVGLL+AC +SG++  G  +F  M +D+ + P  +HY CM+DLLG 
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518

Query: 536 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQL 595
           +G   +A + I  M ++P   +W +LL ACK+H  V LGE  AE L  ++P N G YV L
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578

Query: 596 SNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEEL 655
           SN+YASA  W  VA  R ++  KG+ K  G SSIEI+  +  F +GD+ HPR++EI+  L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638

Query: 656 DRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGIISTAPGTTLRITKNL 715
           + +E  L+ AG+VPD   VL ++  E  E +L +HSE+LA+A+G+IST PGT L I KNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698

Query: 716 RACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           R C NCH A KLISK+  REII RD  RFHHF+DG+CSC D+W
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 5.0e-147
Identity = 276/695 (39.71%), Postives = 411/695 (59.14%), Query Frame = 0 

Query: 64  KHLDQLYVQLIVSGLHKCGFLVIK-FVNACL-HFGDVNYAHKAFREVLEPDILLWNAIIK 123
           + L Q +  +I +G     +   K F  A L  F  + YA K F E+ +P+   WN +I+
Sbjct: 44  RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103

Query: 124 GYTQKNIVAGAIRMYTDM-QMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFG 183
            Y        +I  + DM   S+ +PN +TF +++KA        LG+ +HG   K   G
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163

Query: 184 TNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEM 243
           ++VFV NSL+  Y   G   SA  VF  + ++ VVSW S+I+G+VQ G P +AL++FK+M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223

Query: 244 RQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLV 303
              +VK   + +V V++A   + +L  G+ V   + ++ V     +  ++  MY K G +
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283

Query: 304 EVARFFF-------------------------------NQMEKPNLILWNAMISGYAKNG 363
           E A+  F                               N M + +++ WNA+IS Y +NG
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343

Query: 364 YGEEAIKLFRKM-ISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVN 423
              EA+ +F ++ + KN++++ +T+ S + A AQVG+LEL RW+  YI K   R +  V 
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403

Query: 424 TALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVR 483
           +ALI MY+KCG +  +R VF+ +  +DV +WSAMI G  +HG G EA+ ++  M++A V+
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463

Query: 484 PNDVTFVGLLTACKNSGLVKEGWELFHQMR-DHGIEPHHQHYSCMVDLLGRAGYLNQAYD 543
           PN VTF  +  AC ++GLV E   LFHQM  ++GI P  +HY+C+VD+LGR+GYL +A  
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523

Query: 544 FIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHL 603
           FI +MPI P  SVWGALL ACK+H  + L E+A  +L  L+P N G +V LSN+YA    
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583

Query: 604 WTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKA 663
           W +V+ +R  M   GL K+ G SSIEI+G +  F  GD +HP S++++ +L  + ++LK+
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKS 643

Query: 664 AGYVPDNESVLHDLNHEEI-EESLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHS 722
            GY P+   VL  +  EE+ E+SL  HSE+LA+ YG+IST     +R+ KNLR C +CHS
Sbjct: 644 NGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHS 703

[Close]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match: A0A1S3BEJ1 (pentatricopeptide repeat-containing protein At3g12770 OS=Cucumis melo OX=3656 GN=LOC103488755 PE=3 SV=1)

HSP 1 Score: 1255.4 bits (3247), Expect = 0.0e+00
Identity = 604/659 (91.65%), Postives = 636/659 (96.51%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQ+YVQLIVSGLHKC +LVIKFVNACLHFGDVNYAHKAF EV EPDI LWNAIIKG
Sbjct: 33  RKHLDQVYVQLIVSGLHKCRYLVIKFVNACLHFGDVNYAHKAFCEVSEPDIPLWNAIIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           Y QKNIV G IRMY DMQ+S+VHPNCFTFLYVLKACGGT VE LGKQ+HG TFKYGFG+N
Sbjct: 93  YAQKNIVGGPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-LGKQIHGHTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDP+EALKVFKEMRQ
Sbjct: 153 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALKVFKEMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
           CNVKPDWIALVSVMTAYTDVED+GQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEV
Sbjct: 213 CNVKPDWIALVSVMTAYTDVEDMGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFF++MEKPNLILWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDS+T+RSAILAGAQ
Sbjct: 273 ARFFFDRMEKPNLILWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSITMRSAILAGAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSLELA WLDGYISKSEYRDDTFVNTAL+DMYAKCGSIY AR VFD++ +KDVVLWSAM
Sbjct: 333 VGSLELATWLDGYISKSEYRDDTFVNTALVDMYAKCGSIYLARCVFDRVANKDVVLWSAM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFHQM +HGI
Sbjct: 393 IMGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFIGLLTACKNSGLVKEGWELFHQMPNHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGV+VWGALLSACK+HR+VRLGEIAA+
Sbjct: 453 EPHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIKPGVTVWGALLSACKIHREVRLGEIAAQ 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLFILDPYNTG+YVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEING+LETFH
Sbjct: 513 QLFILDPYNTGHYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGSLETFH 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHPRSKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LCNHSERLAVAYG
Sbjct: 573 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCNHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           I+STAPGTTLRITKNLRACVNCHSAIK+ISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 633 IVSTAPGTTLRITKNLRACVNCHSAIKIISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 690

[Close]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match: A0A5A7SVV3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00420 PE=3 SV=1)

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 603/658 (91.64%), Postives = 635/658 (96.50%), Query Frame = 0 

Query: 64  KHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKGY 123
           KHLDQ+YVQLIVSGLHKC +LVIKFVNACLHFGDVNYAHKAF EV EPDI LWNAIIKGY
Sbjct: 25  KHLDQVYVQLIVSGLHKCRYLVIKFVNACLHFGDVNYAHKAFCEVSEPDIPLWNAIIKGY 84

Query: 124 TQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTNV 183
            QKNIV G IRMY DMQ+S+VHPNCFTFLYVLKACGGT VE LGKQ+HG TFKYGFG+NV
Sbjct: 85  AQKNIVGGPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-LGKQIHGHTFKYGFGSNV 144

Query: 184 FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQC 243
           FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDP+EALKVFKEMRQC
Sbjct: 145 FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALKVFKEMRQC 204

Query: 244 NVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVA 303
           NVKPDWIALVSVMTAYTDVED+GQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEVA
Sbjct: 205 NVKPDWIALVSVMTAYTDVEDMGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 264

Query: 304 RFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQV 363
           RFFF++MEKPNLILWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDS+T+RSAILAGAQV
Sbjct: 265 RFFFDRMEKPNLILWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSITMRSAILAGAQV 324

Query: 364 GSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMI 423
           GSLELA WLDGYISKSEYRDDTFVNTAL+DMYAKCGSIY AR VFD++ +KDVVLWSAMI
Sbjct: 325 GSLELATWLDGYISKSEYRDDTFVNTALVDMYAKCGSIYLARCVFDRVANKDVVLWSAMI 384

Query: 424 MGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGIE 483
           MGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFHQM +HGIE
Sbjct: 385 MGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFIGLLTACKNSGLVKEGWELFHQMPNHGIE 444

Query: 484 PHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQ 543
           PHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGV+VWGALLSACK+HR+VRLGEIAA+Q
Sbjct: 445 PHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIKPGVTVWGALLSACKIHREVRLGEIAAQQ 504

Query: 544 LFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHV 603
           LFILDPYNTG+YVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEING+LETFHV
Sbjct: 505 LFILDPYNTGHYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGSLETFHV 564

Query: 604 GDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGI 663
           GDRSHPRSKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LCNHSERLAVAYGI
Sbjct: 565 GDRSHPRSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCNHSERLAVAYGI 624

Query: 664 ISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           +STAPGTTLRITKNLRACVNCHSAIK+ISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 625 VSTAPGTTLRITKNLRACVNCHSAIKIISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 681

[Close]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match: A0A0A0KLB9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175830 PE=3 SV=1)

HSP 1 Score: 1251.5 bits (3237), Expect = 0.0e+00
Identity = 601/659 (91.20%), Postives = 631/659 (95.75%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQ+YVQLIVSGLHKC FL+IKF+NACLHFGDVNYAHKAFREV EPDILLWNAIIKG
Sbjct: 33  RKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           YTQKNIV   IRMY DMQ+S+VHPNCFTFLYVLKACGGT VEG+GKQ+HGQTFKYGFG+N
Sbjct: 93  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQ S ARIVFDKLHDRTVVSWTSIISGYVQNGDP+EAL VFKEMRQ
Sbjct: 153 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
           CNVKPDWIALVSVMTAYT+VEDLGQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEV
Sbjct: 213 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFFN+MEKPNLILWNAMISGYA NGYGEEAIKLFR+MI+KNIRVDS+T+RSA+LA AQ
Sbjct: 273 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSLELARWLDGYISKSEYRDDTFVNT LIDMYAKCGSIY AR VFD++ DKDVVLWS M
Sbjct: 333 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFH M DHGI
Sbjct: 393 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK+HR+VRLGEIAAE
Sbjct: 453 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLFILDPYNTG+YVQLSNLYASAHLWT VANVRLMMTQKGLNKDLGHSSIEINGNLETF 
Sbjct: 513 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHP+SKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LC+HSERLAVAYG
Sbjct: 573 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           IISTAPGTTLRITKNLRAC+NCHSAIKLISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 633 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691

[Close]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match: A0A6J1CD43 (pentatricopeptide repeat-containing protein At3g12770 OS=Momordica charantia OX=3673 GN=LOC111010106 PE=3 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 597/659 (90.59%), Postives = 630/659 (95.60%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQLYVQLIVSGLHKC FLVIKFVNACLH GDV YAHKAFREVLEPDILLWNA+IKG
Sbjct: 33  RKHLDQLYVQLIVSGLHKCRFLVIKFVNACLHLGDVYYAHKAFREVLEPDILLWNAVIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           YTQ NI  GA+++YT+MQ+S VHP+CFTFLYVLKACGG  +E +GKQMHGQTFKYGFG+N
Sbjct: 93  YTQNNIFVGAVKLYTEMQVSGVHPDCFTFLYVLKACGGMSIEEIGKQMHGQTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQTS AR+VFDKL DRTVVSWTSIISGYVQNGDP EAL VFK+MRQ
Sbjct: 153 VFVQNSLVSMYAKFGQTSPARVVFDKLQDRTVVSWTSIISGYVQNGDPAEALSVFKKMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
            NVK DWIALVSVMTAYTD+EDLGQGKS+HGLVTK G+EFEPDIV+SLTTMYAKRG VEV
Sbjct: 213 SNVKLDWIALVSVMTAYTDMEDLGQGKSIHGLVTKLGLEFEPDIVVSLTTMYAKRGQVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFFNQMEKPNL+LWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDSVTVRSAILAGAQ
Sbjct: 273 ARFFFNQMEKPNLVLWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSVTVRSAILAGAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSL+LARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFA  VFD+MVDKDVVLWSAM
Sbjct: 333 VGSLDLARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFASLVFDRMVDKDVVLWSAM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHG+EAI+LYNAMKQ GVRPNDVTFVGLLTACKNSGLVKEGW+LFH++RDHGI
Sbjct: 393 IMGYGLHGHGKEAINLYNAMKQVGVRPNDVTFVGLLTACKNSGLVKEGWDLFHEIRDHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIM+MPIKPGVSVWGALLSACK+HRQV+LGEIAAE
Sbjct: 453 EPHHQHYSCVVDLLGRAGYLNQAYDFIMNMPIKPGVSVWGALLSACKIHRQVKLGEIAAE 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLF LDPYNTG+YVQLSNLYASAHLW HVANVRLMMTQKGLNKDLGHSSIEINGNLETFH
Sbjct: 513 QLFSLDPYNTGHYVQLSNLYASAHLWNHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHPRSKEIFEELDRLE+RLKAAGY+P  ESVLHDLNHEEIEE+LCNHSERLAVAYG
Sbjct: 573 VGDRSHPRSKEIFEELDRLERRLKAAGYIPHMESVLHDLNHEEIEETLCNHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           IISTAPGT LRIT NLRACVNCHSAIKLISKLVDREIIIRDAKRFH FKDG CSCGDFW
Sbjct: 633 IISTAPGTPLRITNNLRACVNCHSAIKLISKLVDREIIIRDAKRFHRFKDGACSCGDFW 691

[Close]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match: A0A6J1JD09 (pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485683 PE=3 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 594/665 (89.32%), Postives = 630/665 (94.74%), Query Frame = 0 

Query: 57  SRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLW 116
           S NSSCRKHLDQLYVQLIVSGL+KCGFLVIKFVNACLH  DVNYAHK FREVLEPDILLW
Sbjct: 33  SCNSSCRKHLDQLYVQLIVSGLYKCGFLVIKFVNACLHLRDVNYAHKVFREVLEPDILLW 92

Query: 117 NAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFK 176
           N IIKGYTQ NI AGAIRMY DMQ+S V+P+CFTFLYVLKACGG  VEG+GKQMH QTFK
Sbjct: 93  NGIIKGYTQNNIFAGAIRMYKDMQVSGVNPDCFTFLYVLKACGGMSVEGIGKQMHSQTFK 152

Query: 177 YGFGTNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKV 236
           YGFG+NVFVQNSLVSMYA++GQTSSAR+VFDKLH+RTVVSWTSIISGYVQNGDP++AL+V
Sbjct: 153 YGFGSNVFVQNSLVSMYARYGQTSSARLVFDKLHNRTVVSWTSIISGYVQNGDPMDALRV 212

Query: 237 FKEMRQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAK 296
           FK+MRQ  VK DWI LVSVMTAYTD+EDLGQGK++H LVTK G+EFEPDIV+SLT MYAK
Sbjct: 213 FKDMRQSTVKLDWIVLVSVMTAYTDMEDLGQGKAIHSLVTKLGLEFEPDIVVSLTNMYAK 272

Query: 297 RGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSA 356
            G VE+ARFFFNQMEKPNL+LWNAMISGYAKNGYGEEAI+LFRKMISKNI VDSVTVRSA
Sbjct: 273 LGRVEIARFFFNQMEKPNLLLWNAMISGYAKNGYGEEAIELFRKMISKNIGVDSVTVRSA 332

Query: 357 ILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDV 416
           ILA AQVGSLELARWLDGYISKSEYRDD FVNTALIDM+AKCGSI FARSVFD+MVDKD+
Sbjct: 333 ILAVAQVGSLELARWLDGYISKSEYRDDVFVNTALIDMHAKCGSICFARSVFDRMVDKDI 392

Query: 417 VLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQ 476
           V WSAMIMGYGLHGHGQEAI LYN MKQ+G+RPNDVTFVGLLTACKNSGLVKEGWELFHQ
Sbjct: 393 VSWSAMIMGYGLHGHGQEAIDLYNRMKQSGIRPNDVTFVGLLTACKNSGLVKEGWELFHQ 452

Query: 477 MRDHGIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRL 536
           M+DHGIEPHHQHYSC+VDLLGRAGYLN+AYDFIMSMPIKPGVSVWGALLS CK+HRQVRL
Sbjct: 453 MQDHGIEPHHQHYSCVVDLLGRAGYLNRAYDFIMSMPIKPGVSVWGALLSGCKIHRQVRL 512

Query: 537 GEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEING 596
           GEIAAEQLF+LDPYNTG+YVQLSNLYASAHLW  VANVRLMMTQKGLNKDLGHSSIEING
Sbjct: 513 GEIAAEQLFLLDPYNTGHYVQLSNLYASAHLWNQVANVRLMMTQKGLNKDLGHSSIEING 572

Query: 597 NLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSER 656
           NLETFHVGDRSHPRSKEIFEELDRLE+RLKAAGYV   ESVLHDLNHEEIEE+LCNHSER
Sbjct: 573 NLETFHVGDRSHPRSKEIFEELDRLERRLKAAGYVAHMESVLHDLNHEEIEETLCNHSER 632

Query: 657 LAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICS 716
           LAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRD KRFHHFKDG+CS
Sbjct: 633 LAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDGKRFHHFKDGVCS 692

Query: 717 CGDFW 722
           CGDFW
Sbjct: 693 CGDFW 697

[Close]
BLAST of Lsi04G008070 vs. NCBI nr
Match: XP_038892943.1 (pentatricopeptide repeat-containing protein At3g12770 [Benincasa hispida])

HSP 1 Score: 1270.0 bits (3285), Expect = 0.0e+00
Identity = 611/659 (92.72%), Postives = 638/659 (96.81%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQLYVQLIVSGLHKCGFL+IKFVN+CLHFGDVNYAHKAFREV+EPDILLWNAIIKG
Sbjct: 33  RKHLDQLYVQLIVSGLHKCGFLIIKFVNSCLHFGDVNYAHKAFREVVEPDILLWNAIIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           YTQKNI  GAIRMY DMQMS V+PNCFTFLYVLKAC G  VEG+GKQMHGQTFKYGFG+N
Sbjct: 93  YTQKNIAGGAIRMYMDMQMSPVYPNCFTFLYVLKACDGMSVEGIGKQMHGQTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALK+FKEMRQ
Sbjct: 153 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKIFKEMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
           CNVK DWI LVSVMTAYTDVEDLGQGKS+HGLVTK G+EFEPDIVISLTTMYAK GLVE+
Sbjct: 213 CNVKLDWIVLVSVMTAYTDVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKHGLVEI 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLF +MISKNIRVDSVTVRSAILAGAQ
Sbjct: 273 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFHEMISKNIRVDSVTVRSAILAGAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSL+LARWLD YIS+SEYRDDTFVNT+L+DMYAKCGSIYFAR VFD+MV KDVVLWSAM
Sbjct: 333 VGSLKLARWLDDYISESEYRDDTFVNTSLVDMYAKCGSIYFARCVFDRMVVKDVVLWSAM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHGQEAI+ YN MKQAGV PNDVTFVGLLTACKNSGLVKEGWELFHQM+D+GI
Sbjct: 393 IMGYGLHGHGQEAINHYNEMKQAGVCPNDVTFVGLLTACKNSGLVKEGWELFHQMQDYGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIMSMP+KPGVSVWGALLSACK+HR+VRLGEIAAE
Sbjct: 453 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPVKPGVSVWGALLSACKIHREVRLGEIAAE 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLFILDPYN GY+VQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSI+INGNLETFH
Sbjct: 513 QLFILDPYNAGYHVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIKINGNLETFH 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHPRSKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LCNHSERLAVAYG
Sbjct: 573 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCNHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 633 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691

[Close]
BLAST of Lsi04G008070 vs. NCBI nr
Match: XP_008445864.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] >XP_016900179.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] >XP_016900180.1 PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo])

HSP 1 Score: 1255.4 bits (3247), Expect = 0.0e+00
Identity = 604/659 (91.65%), Postives = 636/659 (96.51%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQ+YVQLIVSGLHKC +LVIKFVNACLHFGDVNYAHKAF EV EPDI LWNAIIKG
Sbjct: 33  RKHLDQVYVQLIVSGLHKCRYLVIKFVNACLHFGDVNYAHKAFCEVSEPDIPLWNAIIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           Y QKNIV G IRMY DMQ+S+VHPNCFTFLYVLKACGGT VE LGKQ+HG TFKYGFG+N
Sbjct: 93  YAQKNIVGGPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-LGKQIHGHTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDP+EALKVFKEMRQ
Sbjct: 153 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALKVFKEMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
           CNVKPDWIALVSVMTAYTDVED+GQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEV
Sbjct: 213 CNVKPDWIALVSVMTAYTDVEDMGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFF++MEKPNLILWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDS+T+RSAILAGAQ
Sbjct: 273 ARFFFDRMEKPNLILWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSITMRSAILAGAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSLELA WLDGYISKSEYRDDTFVNTAL+DMYAKCGSIY AR VFD++ +KDVVLWSAM
Sbjct: 333 VGSLELATWLDGYISKSEYRDDTFVNTALVDMYAKCGSIYLARCVFDRVANKDVVLWSAM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFHQM +HGI
Sbjct: 393 IMGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFIGLLTACKNSGLVKEGWELFHQMPNHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGV+VWGALLSACK+HR+VRLGEIAA+
Sbjct: 453 EPHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIKPGVTVWGALLSACKIHREVRLGEIAAQ 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLFILDPYNTG+YVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEING+LETFH
Sbjct: 513 QLFILDPYNTGHYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGSLETFH 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHPRSKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LCNHSERLAVAYG
Sbjct: 573 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCNHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           I+STAPGTTLRITKNLRACVNCHSAIK+ISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 633 IVSTAPGTTLRITKNLRACVNCHSAIKIISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 690

[Close]
BLAST of Lsi04G008070 vs. NCBI nr
Match: KAA0034056.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1253.4 bits (3242), Expect = 0.0e+00
Identity = 603/658 (91.64%), Postives = 635/658 (96.50%), Query Frame = 0 

Query: 64  KHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKGY 123
           KHLDQ+YVQLIVSGLHKC +LVIKFVNACLHFGDVNYAHKAF EV EPDI LWNAIIKGY
Sbjct: 25  KHLDQVYVQLIVSGLHKCRYLVIKFVNACLHFGDVNYAHKAFCEVSEPDIPLWNAIIKGY 84

Query: 124 TQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTNV 183
            QKNIV G IRMY DMQ+S+VHPNCFTFLYVLKACGGT VE LGKQ+HG TFKYGFG+NV
Sbjct: 85  AQKNIVGGPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-LGKQIHGHTFKYGFGSNV 144

Query: 184 FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQC 243
           FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDP+EALKVFKEMRQC
Sbjct: 145 FVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALKVFKEMRQC 204

Query: 244 NVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVA 303
           NVKPDWIALVSVMTAYTDVED+GQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEVA
Sbjct: 205 NVKPDWIALVSVMTAYTDVEDMGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 264

Query: 304 RFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQV 363
           RFFF++MEKPNLILWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDS+T+RSAILAGAQV
Sbjct: 265 RFFFDRMEKPNLILWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSITMRSAILAGAQV 324

Query: 364 GSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMI 423
           GSLELA WLDGYISKSEYRDDTFVNTAL+DMYAKCGSIY AR VFD++ +KDVVLWSAMI
Sbjct: 325 GSLELATWLDGYISKSEYRDDTFVNTALVDMYAKCGSIYLARCVFDRVANKDVVLWSAMI 384

Query: 424 MGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGIE 483
           MGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFHQM +HGIE
Sbjct: 385 MGYGLHGHGQEAIRLYNEMKQAGVSPNDGTFIGLLTACKNSGLVKEGWELFHQMPNHGIE 444

Query: 484 PHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQ 543
           PHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGV+VWGALLSACK+HR+VRLGEIAA+Q
Sbjct: 445 PHHQHYSCIVDLLGRAGYLNQAYDFIMSMPIKPGVTVWGALLSACKIHREVRLGEIAAQQ 504

Query: 544 LFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHV 603
           LFILDPYNTG+YVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEING+LETFHV
Sbjct: 505 LFILDPYNTGHYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGSLETFHV 564

Query: 604 GDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGI 663
           GDRSHPRSKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LCNHSERLAVAYGI
Sbjct: 565 GDRSHPRSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCNHSERLAVAYGI 624

Query: 664 ISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           +STAPGTTLRITKNLRACVNCHSAIK+ISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 625 VSTAPGTTLRITKNLRACVNCHSAIKIISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 681

[Close]
BLAST of Lsi04G008070 vs. NCBI nr
Match: XP_011654911.1 (pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus])

HSP 1 Score: 1251.5 bits (3237), Expect = 0.0e+00
Identity = 601/659 (91.20%), Postives = 631/659 (95.75%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQ+YVQLIVSGLHKC FL+IKF+NACLHFGDVNYAHKAFREV EPDILLWNAIIKG
Sbjct: 33  RKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           YTQKNIV   IRMY DMQ+S+VHPNCFTFLYVLKACGGT VEG+GKQ+HGQTFKYGFG+N
Sbjct: 93  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQ S ARIVFDKLHDRTVVSWTSIISGYVQNGDP+EAL VFKEMRQ
Sbjct: 153 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
           CNVKPDWIALVSVMTAYT+VEDLGQGKS+HGLVTK G+EFEPDIVISLTTMYAKRGLVEV
Sbjct: 213 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFFN+MEKPNLILWNAMISGYA NGYGEEAIKLFR+MI+KNIRVDS+T+RSA+LA AQ
Sbjct: 273 ARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSLELARWLDGYISKSEYRDDTFVNT LIDMYAKCGSIY AR VFD++ DKDVVLWS M
Sbjct: 333 VGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHGQEAI LYN MKQAGV PND TF+GLLTACKNSGLVKEGWELFH M DHGI
Sbjct: 393 IMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK+HR+VRLGEIAAE
Sbjct: 453 EPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAE 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLFILDPYNTG+YVQLSNLYASAHLWT VANVRLMMTQKGLNKDLGHSSIEINGNLETF 
Sbjct: 513 QLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQ 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHP+SKEIFEELDRLEKRLKAAGYVP  ESVLHDLNHEEIEE+LC+HSERLAVAYG
Sbjct: 573 VGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           IISTAPGTTLRITKNLRAC+NCHSAIKLISKLVDREIIIRDAKRFHHFKDG+CSCGDFW
Sbjct: 633 IISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 691

[Close]
BLAST of Lsi04G008070 vs. NCBI nr
Match: XP_022139117.1 (pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139118.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_022139119.1 pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 597/659 (90.59%), Postives = 630/659 (95.60%), Query Frame = 0 

Query: 63  RKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKG 122
           RKHLDQLYVQLIVSGLHKC FLVIKFVNACLH GDV YAHKAFREVLEPDILLWNA+IKG
Sbjct: 33  RKHLDQLYVQLIVSGLHKCRFLVIKFVNACLHLGDVYYAHKAFREVLEPDILLWNAVIKG 92

Query: 123 YTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTN 182
           YTQ NI  GA+++YT+MQ+S VHP+CFTFLYVLKACGG  +E +GKQMHGQTFKYGFG+N
Sbjct: 93  YTQNNIFVGAVKLYTEMQVSGVHPDCFTFLYVLKACGGMSIEEIGKQMHGQTFKYGFGSN 152

Query: 183 VFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQ 242
           VFVQNSLVSMYAKFGQTS AR+VFDKL DRTVVSWTSIISGYVQNGDP EAL VFK+MRQ
Sbjct: 153 VFVQNSLVSMYAKFGQTSPARVVFDKLQDRTVVSWTSIISGYVQNGDPAEALSVFKKMRQ 212

Query: 243 CNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEV 302
            NVK DWIALVSVMTAYTD+EDLGQGKS+HGLVTK G+EFEPDIV+SLTTMYAKRG VEV
Sbjct: 213 SNVKLDWIALVSVMTAYTDMEDLGQGKSIHGLVTKLGLEFEPDIVVSLTTMYAKRGQVEV 272

Query: 303 ARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQ 362
           ARFFFNQMEKPNL+LWNAMISGYAKNGYGEEAIKLFR+MISKNIRVDSVTVRSAILAGAQ
Sbjct: 273 ARFFFNQMEKPNLVLWNAMISGYAKNGYGEEAIKLFREMISKNIRVDSVTVRSAILAGAQ 332

Query: 363 VGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAM 422
           VGSL+LARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFA  VFD+MVDKDVVLWSAM
Sbjct: 333 VGSLDLARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFASLVFDRMVDKDVVLWSAM 392

Query: 423 IMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRDHGI 482
           IMGYGLHGHG+EAI+LYNAMKQ GVRPNDVTFVGLLTACKNSGLVKEGW+LFH++RDHGI
Sbjct: 393 IMGYGLHGHGKEAINLYNAMKQVGVRPNDVTFVGLLTACKNSGLVKEGWDLFHEIRDHGI 452

Query: 483 EPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAE 542
           EPHHQHYSC+VDLLGRAGYLNQAYDFIM+MPIKPGVSVWGALLSACK+HRQV+LGEIAAE
Sbjct: 453 EPHHQHYSCVVDLLGRAGYLNQAYDFIMNMPIKPGVSVWGALLSACKIHRQVKLGEIAAE 512

Query: 543 QLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 602
           QLF LDPYNTG+YVQLSNLYASAHLW HVANVRLMMTQKGLNKDLGHSSIEINGNLETFH
Sbjct: 513 QLFSLDPYNTGHYVQLSNLYASAHLWNHVANVRLMMTQKGLNKDLGHSSIEINGNLETFH 572

Query: 603 VGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYG 662
           VGDRSHPRSKEIFEELDRLE+RLKAAGY+P  ESVLHDLNHEEIEE+LCNHSERLAVAYG
Sbjct: 573 VGDRSHPRSKEIFEELDRLERRLKAAGYIPHMESVLHDLNHEEIEETLCNHSERLAVAYG 632

Query: 663 IISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           IISTAPGT LRIT NLRACVNCHSAIKLISKLVDREIIIRDAKRFH FKDG CSCGDFW
Sbjct: 633 IISTAPGTPLRITNNLRACVNCHSAIKLISKLVDREIIIRDAKRFHRFKDGACSCGDFW 691

[Close]
BLAST of Lsi04G008070 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 844.3 bits (2180), Expect = 7.0e-245
Identity = 391/672 (58.18%), Postives = 524/672 (77.98%), Query Frame = 0 

Query: 52  FFAQLSRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEP 111
           F+A L  +++ +  L Q++ +L+V GL   GFL+ K ++A   FGD+ +A + F ++  P
Sbjct: 23  FYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP 82

Query: 112 DILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMH 171
            I  WNAII+GY++ N    A+ MY++MQ++RV P+ FTF ++LKAC G     +G+ +H
Sbjct: 83  QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 172 GQTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFD--KLHDRTVVSWTSIISGYVQNGD 231
            Q F+ GF  +VFVQN L+++YAK  +  SAR VF+   L +RT+VSWT+I+S Y QNG+
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 232 PVEALKVFKEMRQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVIS 291
           P+EAL++F +MR+ +VKPDW+ALVSV+ A+T ++DL QG+S+H  V K G+E EPD++IS
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 292 LTTMYAKRGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVD 351
           L TMYAK G V  A+  F++M+ PNLILWNAMISGYAKNGY  EAI +F +MI+K++R D
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322

Query: 352 SVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFD 411
           ++++ SAI A AQVGSLE AR +  Y+ +S+YRDD F+++ALIDM+AKCGS+  AR VFD
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382

Query: 412 KMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKE 471
           + +D+DVV+WSAMI+GYGLHG  +EAISLY AM++ GV PNDVTF+GLL AC +SG+V+E
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442

Query: 472 GWELFHQMRDHGIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 531
           GW  F++M DH I P  QHY+C++DLLGRAG+L+QAY+ I  MP++PGV+VWGALLSACK
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502

Query: 532 VHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGH 591
            HR V LGE AA+QLF +DP NTG+YVQLSNLYA+A LW  VA VR+ M +KGLNKD+G 
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562

Query: 592 SSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEES 651
           S +E+ G LE F VGD+SHPR +EI  +++ +E RLK  G+V + ++ LHDLN EE EE+
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 622

Query: 652 LCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHH 711
           LC+HSER+A+AYG+IST  GT LRITKNLRACVNCH+A KLISKLVDREI++RD  RFHH
Sbjct: 623 LCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHH 682

Query: 712 FKDGICSCGDFW 722
           FKDG+CSCGD+W
Sbjct: 683 FKDGVCSCGDYW 694

[Close]
BLAST of Lsi04G008070 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 547.7 bits (1410), Expect = 1.4e-155
Identity = 269/655 (41.07%), Postives = 411/655 (62.75%), Query Frame = 0 

Query: 68  QLYVQLIVSGLHKCGFLVIKFVNACLHFGDVNYAHKAFREVLEPDILLWNAIIKGYTQKN 127
           +++  L+ SG     F +    N       VN A K F  + E D++ WN I+ GY+Q  
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215

Query: 128 IVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFGTNVFVQN 187
           +   A+ M   M    + P+  T + VL A     +  +GK++HG   + GF + V +  
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275

Query: 188 SLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEMRQCNVKP 247
           +LV MYAK G   +AR +FD + +R VVSW S+I  YVQN +P EA+ +F++M    VKP
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335

Query: 248 DWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVARFFF 307
             ++++  + A  D+ DL +G+ +H L  + G++    +V SL +MY K   V+ A   F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395

Query: 308 NQMEKPNLILWNAMISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQVGSLE 367
            +++   L+ WNAMI G+A+NG   +A+  F +M S+ ++ D+ T  S I A A++    
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455

Query: 368 LARWLDGYISKSEYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYG 427
            A+W+ G + +S    + FV TAL+DMYAKCG+I  AR +FD M ++ V  W+AMI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515

Query: 428 LHGHGQEAISLYNAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQMRD-HGIEPHH 487
            HG G+ A+ L+  M++  ++PN VTF+ +++AC +SGLV+ G + F+ M++ + IE   
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575

Query: 488 QHYSCMVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFI 547
            HY  MVDLLGRAG LN+A+DFIM MP+KP V+V+GA+L AC++H+ V   E AAE+LF 
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635

Query: 548 LDPYNTGYYVQLSNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDR 607
           L+P + GY+V L+N+Y +A +W  V  VR+ M ++GL K  G S +EI   + +F  G  
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695

Query: 608 SHPRSKEIFEELDRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGIIST 667
           +HP SK+I+  L++L   +K AGYVPD   VL  + ++  E+ L  HSE+LA+++G+++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNT 755

Query: 668 APGTTLRITKNLRACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
             GTT+ + KNLR C +CH+A K IS +  REI++RD +RFHHFK+G CSCGD+W
Sbjct: 756 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of Lsi04G008070 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 535.0 bits (1377), Expect = 9.1e-152
Identity = 263/626 (42.01%), Postives = 402/626 (64.22%), Query Frame = 0 

Query: 106 REVLEPDILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEG 165
           R V + D+  WN++I    +    A A+  ++ M+   ++P   +F   +KAC       
Sbjct: 34  RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93

Query: 166 LGKQMHGQTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYV 225
            GKQ H Q F +G+ +++FV ++L+ MY+  G+   AR VFD++  R +VSWTS+I GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 226 QNGDPVEALKVFKEM------RQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSG 285
            NG+ ++A+ +FK++          +  D + LVSV++A + V   G  +S+H  V K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 286 VEFEPDIVISLTTMYAK--RGLVEVARFFFNQMEKPNLILWNAMISGYAKNGYGEEAIKL 345
            +    +  +L   YAK   G V VAR  F+Q+   + + +N+++S YA++G   EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 346 FRKMI-SKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVNTALIDMYA 405
           FR+++ +K +  +++T+ + +LA +  G+L + + +   + +    DD  V T++IDMY 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333

Query: 406 KCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVRPNDVTFVG 465
           KCG +  AR  FD+M +K+V  W+AMI GYG+HGH  +A+ L+ AM  +GVRPN +TFV 
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 466 LLTACKNSGLVKEGWELFHQMRDH-GIEPHHQHYSCMVDLLGRAGYLNQAYDFIMSMPIK 525
           +L AC ++GL  EGW  F+ M+   G+EP  +HY CMVDLLGRAG+L +AYD I  M +K
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453

Query: 526 PGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHLWTHVANVR 585
           P   +W +LL+AC++H+ V L EI+  +LF LD  N GYY+ LS++YA A  W  V  VR
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513

Query: 586 LMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKAAGYVPDNE 645
           ++M  +GL K  G S +E+NG +  F +GD  HP+ ++I+E L  L ++L  AGYV +  
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573

Query: 646 SVLHDLNHEEIEESLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHSAIKLISKLV 705
           SV HD++ EE E +L  HSE+LA+A+GI++T PG+T+ + KNLR C +CH+ IKLISK+V
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 706 DREIIIRDAKRFHHFKDGICSCGDFW 722
           DRE ++RDAKRFHHFKDG CSCGD+W
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659

[Close]
BLAST of Lsi04G008070 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 527.3 bits (1357), Expect = 1.9e-149
Identity = 271/703 (38.55%), Postives = 412/703 (58.61%), Query Frame = 0 

Query: 56  LSRNSSCRKHLDQLYVQLIVSGLHKCGFLVIKFVNACL---HFGDVNYAHKAFREVLEPD 115
           L  N    + L  ++ Q+I  GLH   + + K +  C+   HF  + YA   F+ + EP+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 116 ILLWNAIIKGYTQKNIVAGAIRMYTDMQMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHG 175
           +L+WN + +G+   +    A+++Y  M    + PN +TF +VLK+C  +     G+Q+HG
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158

Query: 176 QTFKYGFGTNVFVQNSLVSMYAKFGQTSSARIVFD------------------------- 235
              K G   +++V  SL+SMY + G+   A  VFD                         
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218

Query: 236 --KLHD----RTVVSWTSIISGYVQNGDPVEALKVFKEMRQCNVKPDWIALVSVMTAYTD 295
             KL D    + VVSW ++ISGY + G+  EAL++FK+M + NV+PD   +V+V++A   
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278

Query: 296 VEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLVEVARFFFNQMEKPNLILWNAM 355
              +  G+ VH  +   G      IV +L  +Y+K G +E A   F ++   ++I WN +
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338

Query: 356 ISGYAKNGYGEEAIKLFRKMISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISK--S 415
           I GY      +EA+ LF++M+      + VT+ S + A A +G++++ RW+  YI K   
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398

Query: 416 EYRDDTFVNTALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLY 475
              + + + T+LIDMYAKCG I  A  VF+ ++ K +  W+AMI G+ +HG    +  L+
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458

Query: 476 NAMKQAGVRPNDVTFVGLLTACKNSGLVKEGWELFHQM-RDHGIEPHHQHYSCMVDLLGR 535
           + M++ G++P+D+TFVGLL+AC +SG++  G  +F  M +D+ + P  +HY CM+DLLG 
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518

Query: 536 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQL 595
           +G   +A + I  M ++P   +W +LL ACK+H  V LGE  AE L  ++P N G YV L
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578

Query: 596 SNLYASAHLWTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEEL 655
           SN+YASA  W  VA  R ++  KG+ K  G SSIEI+  +  F +GD+ HPR++EI+  L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638

Query: 656 DRLEKRLKAAGYVPDNESVLHDLNHEEIEESLCNHSERLAVAYGIISTAPGTTLRITKNL 715
           + +E  L+ AG+VPD   VL ++  E  E +L +HSE+LA+A+G+IST PGT L I KNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698

Query: 716 RACVNCHSAIKLISKLVDREIIIRDAKRFHHFKDGICSCGDFW 722
           R C NCH A KLISK+  REII RD  RFHHF+DG+CSC D+W
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of Lsi04G008070 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 523.1 bits (1346), Expect = 3.6e-148
Identity = 276/695 (39.71%), Postives = 411/695 (59.14%), Query Frame = 0 

Query: 64  KHLDQLYVQLIVSGLHKCGFLVIK-FVNACL-HFGDVNYAHKAFREVLEPDILLWNAIIK 123
           + L Q +  +I +G     +   K F  A L  F  + YA K F E+ +P+   WN +I+
Sbjct: 44  RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103

Query: 124 GYTQKNIVAGAIRMYTDM-QMSRVHPNCFTFLYVLKACGGTLVEGLGKQMHGQTFKYGFG 183
            Y        +I  + DM   S+ +PN +TF +++KA        LG+ +HG   K   G
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163

Query: 184 TNVFVQNSLVSMYAKFGQTSSARIVFDKLHDRTVVSWTSIISGYVQNGDPVEALKVFKEM 243
           ++VFV NSL+  Y   G   SA  VF  + ++ VVSW S+I+G+VQ G P +AL++FK+M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223

Query: 244 RQCNVKPDWIALVSVMTAYTDVEDLGQGKSVHGLVTKSGVEFEPDIVISLTTMYAKRGLV 303
              +VK   + +V V++A   + +L  G+ V   + ++ V     +  ++  MY K G +
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283

Query: 304 EVARFFF-------------------------------NQMEKPNLILWNAMISGYAKNG 363
           E A+  F                               N M + +++ WNA+IS Y +NG
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343

Query: 364 YGEEAIKLFRKM-ISKNIRVDSVTVRSAILAGAQVGSLELARWLDGYISKSEYRDDTFVN 423
              EA+ +F ++ + KN++++ +T+ S + A AQVG+LEL RW+  YI K   R +  V 
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403

Query: 424 TALIDMYAKCGSIYFARSVFDKMVDKDVVLWSAMIMGYGLHGHGQEAISLYNAMKQAGVR 483
           +ALI MY+KCG +  +R VF+ +  +DV +WSAMI G  +HG G EA+ ++  M++A V+
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463

Query: 484 PNDVTFVGLLTACKNSGLVKEGWELFHQMR-DHGIEPHHQHYSCMVDLLGRAGYLNQAYD 543
           PN VTF  +  AC ++GLV E   LFHQM  ++GI P  +HY+C+VD+LGR+GYL +A  
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523

Query: 544 FIMSMPIKPGVSVWGALLSACKVHRQVRLGEIAAEQLFILDPYNTGYYVQLSNLYASAHL 603
           FI +MPI P  SVWGALL ACK+H  + L E+A  +L  L+P N G +V LSN+YA    
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583

Query: 604 WTHVANVRLMMTQKGLNKDLGHSSIEINGNLETFHVGDRSHPRSKEIFEELDRLEKRLKA 663
           W +V+ +R  M   GL K+ G SSIEI+G +  F  GD +HP S++++ +L  + ++LK+
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKS 643

Query: 664 AGYVPDNESVLHDLNHEEI-EESLCNHSERLAVAYGIISTAPGTTLRITKNLRACVNCHS 722
            GY P+   VL  +  EE+ E+SL  HSE+LA+ YG+IST     +R+ KNLR C +CHS
Sbjct: 644 NGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHS 703

The following BLAST results are available for this feature:
BLAST of Lsi04G008070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LTV89.9e-24458.18Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q3E6Q11.9e-15441.07Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9LW321.3e-15042.01Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
Q9LN012.7e-14838.55Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823805.0e-14739.71Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
BLAST of Lsi04G008070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BEJ10.0e+0091.65pentatricopeptide repeat-containing protein At3g12770 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7SVV30.0e+0091.64Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KLB90.0e+0091.20DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G1758... [more]
A0A6J1CD430.0e+0090.59pentatricopeptide repeat-containing protein At3g12770 OS=Momordica charantia OX=... [more]
A0A6J1JD090.0e+0089.32pentatricopeptide repeat-containing protein At3g12770 isoform X1 OS=Cucurbita ma... [more]
BLAST of Lsi04G008070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038892943.10.0e+0092.72pentatricopeptide repeat-containing protein At3g12770 [Benincasa hispida][more]
XP_008445864.10.0e+0091.65PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis melo] ... [more]
KAA0034056.10.0e+0091.64pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_011654911.10.0e+0091.20pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus][more]
XP_022139117.10.0e+0090.59pentatricopeptide repeat-containing protein At3g12770 [Momordica charantia] >XP_... [more]
BLAST of Lsi04G008070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12770.17.0e-24558.18mitochondrial editing factor 22 [more]
AT1G11290.11.4e-15541.07Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G26782.19.1e-15242.01Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.11.9e-14938.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.13.6e-14839.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 414..461
e-value: 2.6E-11
score: 43.5
coord: 111..158
e-value: 2.6E-9
score: 37.2
coord: 213..256
e-value: 7.0E-10
score: 39.0
coord: 313..354
e-value: 1.7E-10
score: 40.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 187..211
e-value: 0.67
score: 10.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 116..148
e-value: 0.0012
score: 16.9
coord: 317..349
e-value: 6.0E-9
score: 33.5
coord: 417..450
e-value: 1.2E-5
score: 23.1
coord: 452..484
e-value: 6.1E-5
score: 20.9
coord: 215..249
e-value: 2.3E-10
score: 38.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 450..484
score: 11.23539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 12.846701
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..146
score: 9.426776
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 415..449
score: 11.345003
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 374..607
e-value: 8.9E-39
score: 135.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 52..168
e-value: 1.8E-11
score: 45.7
coord: 169..266
e-value: 7.8E-21
score: 76.2
coord: 267..373
e-value: 4.4E-19
score: 70.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 285..419
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 588..711
e-value: 7.0E-39
score: 132.6
NoneNo IPR availablePANTHERPTHR47924:SF50SUBFAMILY NOT NAMEDcoord: 37..715
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 37..715

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G008070.1Lsi04G008070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding