Lsi04G007980 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G007980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr04: 7544236 .. 7547340 (-)
RNA-Seq Expression	Lsi04G007980
Synteny	Lsi04G007980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATGCTTTGTGCTTGATTCGGCAAATGGCTGCAAATTCGCACCTTTGCAGAATTCTCAGTAGTTCCCCTTCCCTAATCGGGAATAATTTTTGTACCCATGTTATGTTTTTCTCGACCACTAACCCATCTGATCATTACGATGACACTGTTCGCGAATTTTCCACGATCTTGAAGCGTAAAGATTGGCAGATCCTTTTAAACAACGAGGAAAGTTTGAGGAAGCTAAACCCAGAAATCGTCTGCTCTGTTGTACAGAAGAACGAAATCGATGACCCTGTGCGGCTTCAAAATTTCTTCTATTGGTCGACTTCCAAAATGGGTACTTCACAAAACTTGCATTCTTATTCTATTCTTGCGATTCGTCTTTGTAATTCTGGGCTTTTCCTCCGTGCCGATAACATGTTTGAGAAATTGCTTGAGACCCGTAAACCGCCGTTGGAGATTTTAGATTCCTTGGTTAGATGCTATAGAGAATGTGGTGGGTCTAACTTGACTGTTTTTGATATTTTGATTGATAACTTTAGGCAGTTGGGTTTCTTGAATGAGGCCTCTAGTGTTTTTATAGCTTCCATTAGTGGAGGATTCTTTCCCAGTTTGATATGCTGTAATAGTTTGATGAGGGATTTATTGAAGAGTAACATGATGGGGTTGTTTTGGAAGGTGTATGGAAGTATGGTGGAGGCTAAGATAGTTCCTGATGTTTATACATACACTAATGTGATCAATGCGCATTGTAAAGTTGGTGATGTTATCAAGGGAAAGATGGTTCTTTCTGAGATGGAGGAGAAGGAATGTAAACCTAATTTGGTTACCTACAATGTTATTATTGGGGGTTTATGTCGGACTGGAGCTGTTGATGAAGCTTTAGAGGTAAAGAAGTTGATGATGGAGAAGGGATTGGTTCCAGATGGCTATACTTATTCTTTACTTATTGATGGGTTTTGCAAACAGAAGAGATCAGAAGAAGCAAAATTGATATTCGAAAGTATGCTTAGTTCGGGTTTAAATCCTAATCATTTTACCTGCACTGCTTTGGTTGATGGGTTCATGAAACAAGGGAATATTGACGAGGCATTGAGGATCAAAGATGAGATGATTACTCGTGGACTTAAGTTGAACATTGTAACTTATAATGCAATGATCAGGAGCATTGCTAAGGCTGGTGAGATGGGGAAAGCAATGGCTCTTTTCAACGAGATGTTTATGACTGGCATAGAACCAGATACCTGGACCTACAACTCAATGATTGATGGATATTTGAAGTCTCACGATGTGGCTAAAGCTTATGAGCTCCTAGCTGAGATGAAAGCAAGGAATTTGATGCCATCGTCGTTCACTTATAGTGTGCTTATTAGTGGCCTTTGTCGTTCCAGTGATCTACAAAAGGCTAATGAAGTTTTGCAGCAAATGATCAGGAACGGGGTGAAACCGAATGCTGTTATATATGCTACCTTGATTAAGGCTTATGTCCAAGAAAGTAGATTTGAAGGTGCAATAGAATTACTAAAAAGGATGATAGCAAATGGGGTTCTGCCTGATTTGTTTTGCTATAATTCTCTTATAATTGGTCTTTGTAGAGCGAAGAAGGTGGAAGAAGCAAAAATGTTGCTTGTTGAGATGGGTGAGAAAGGAATAAAACCTAATGCATATACTTATGGAGCTTTTATTAGTTTATATGGTAAATCAGGTGAAATCCAAGTTGCAGAAAGGTATTTCCAAGACATGCTATCTTCTGGTATAGTGCCTAACAACGTAATCTATACTGCTTTGATTGATGGGCATTGCAATGTCGGAAATACGGTAGAAGCTTTGTCAACTTTCAAATGCATGCTTGAGAAAGGGTTGATTCCCGACGTCCAAACATACAGTGCACTAATTCACGTTCTCTCCAAGAATGGGAAAACCGAAGGAGCCATGGGGGTTTTCTCAGAATTCCTTAACAAGGGTTTGGTGCCTGACGTTTTTATATACAACTCTCTCATATCTGGTTTCTGCAAGAAAGGTGAGATTGAGAAGGCATCCCAACTTTATGAAGAGATGCTACTTAATGGAATTATTCCCAACATTGTCACATACAACACCTTGATTAATGGACTGTGCAAACTTGGTGAGGTAAAGAAAGCAAGGGAACTTTTTGACAAAATTAAAGGAAAAGATCTGGTTCCCAATGTTGTTACTTACTCAACAATCGTAGATGGATATTGCAAATCTGGAAACTTAATCGAGGCATTTAAACTGTTCGATGAAATGATATTGAAAGGAATTCCTCCCGATTGTCACATCTACTGTATCCTCATTGACGGTTGTGGCAAGGAAGGAAATTTGGAGAAGGCACTTTCTTTATTTCACGAAGCACTGCAGAAAAGTGTTTCTTCCTCTTCTGCTTTCAACTCTTTGATTGATGGTTTCTGCAAACTTGGAAAAGTTATTGAAGCTAGGGAGTTGTTTGATGATATGGTAGATAAAAAAGTCATACCGAATAGTGTGACGTACACAATTCTGATTGATGCATACGGCAAAGCAGAAATGATAGAGGAAGCAGAGCAGCTTTTTCTAGATATGGAAACGAGAAATATCATACCGAATACTCTTACATATACTTCACTTTTACTCGGTTATAACCAGATAGGAAACAGATTTAAGATGATTTCTTTGTTCAAGGATATGGAAGCTAGGGGGATTGCTTGTGATGCAATAGCATATGGTGTGATGGCTAGTGTCTACTGCAAGGAAGGAAATTCTCTTGAAGCCTTGAAGTTGCTCGACAAAAGCTTGGTTGAGGGTATAAAGTTGGACGATGATGTGTTTGATGCATTAACATTTCACCTCTGCAAGGAAGAAAAAATATCTACCATACTGGAGTTACTTGATGAAAGGGGAAAAGAAGAAATTTCTCTTAGCTCTACTACATGTAATGCTCTTTTACTTGGTTTTTACAATGCGGGCAATGAAGAGGAAGCTTCAAAGGTTCTTGGCACTATGCAAAGGTTGGGATGGGTTCCAGCCTCTTTAAGCTTAACTGATTCACTAAGTGCTGGTAGAAACGATATGAAATCCGACAATTTCCCGAGTATTGCAATGCAAATAGGGTCCGTGTAG

mRNA sequence

ATGGCTAATGCTTTGTGCTTGATTCGGCAAATGGCTGCAAATTCGCACCTTTGCAGAATTCTCAGTAGTTCCCCTTCCCTAATCGGGAATAATTTTTGTACCCATGTTATGTTTTTCTCGACCACTAACCCATCTGATCATTACGATGACACTGTTCGCGAATTTTCCACGATCTTGAAGCGTAAAGATTGGCAGATCCTTTTAAACAACGAGGAAAGTTTGAGGAAGCTAAACCCAGAAATCGTCTGCTCTGTTGTACAGAAGAACGAAATCGATGACCCTGTGCGGCTTCAAAATTTCTTCTATTGGTCGACTTCCAAAATGGGTACTTCACAAAACTTGCATTCTTATTCTATTCTTGCGATTCGTCTTTGTAATTCTGGGCTTTTCCTCCGTGCCGATAACATGTTTGAGAAATTGCTTGAGACCCGTAAACCGCCGTTGGAGATTTTAGATTCCTTGGTTAGATGCTATAGAGAATGTGGTGGGTCTAACTTGACTGTTTTTGATATTTTGATTGATAACTTTAGGCAGTTGGGTTTCTTGAATGAGGCCTCTAGTGTTTTTATAGCTTCCATTAGTGGAGGATTCTTTCCCAGTTTGATATGCTGTAATAGTTTGATGAGGGATTTATTGAAGAGTAACATGATGGGGTTGTTTTGGAAGGTGTATGGAAGTATGGTGGAGGCTAAGATAGTTCCTGATGTTTATACATACACTAATGTGATCAATGCGCATTGTAAAGTTGGTGATGTTATCAAGGGAAAGATGGTTCTTTCTGAGATGGAGGAGAAGGAATGTAAACCTAATTTGGTTACCTACAATGTTATTATTGGGGGTTTATGTCGGACTGGAGCTGTTGATGAAGCTTTAGAGGTAAAGAAGTTGATGATGGAGAAGGGATTGGTTCCAGATGGCTATACTTATTCTTTACTTATTGATGGGTTTTGCAAACAGAAGAGATCAGAAGAAGCAAAATTGATATTCGAAAGTATGCTTAGTTCGGGTTTAAATCCTAATCATTTTACCTGCACTGCTTTGGTTGATGGGTTCATGAAACAAGGGAATATTGACGAGGCATTGAGGATCAAAGATGAGATGATTACTCGTGGACTTAAGTTGAACATTGTAACTTATAATGCAATGATCAGGAGCATTGCTAAGGCTGGTGAGATGGGGAAAGCAATGGCTCTTTTCAACGAGATGTTTATGACTGGCATAGAACCAGATACCTGGACCTACAACTCAATGATTGATGGATATTTGAAGTCTCACGATGTGGCTAAAGCTTATGAGCTCCTAGCTGAGATGAAAGCAAGGAATTTGATGCCATCGTCGTTCACTTATAGTGTGCTTATTAGTGGCCTTTGTCGTTCCAGTGATCTACAAAAGGCTAATGAAGTTTTGCAGCAAATGATCAGGAACGGGGTGAAACCGAATGCTGTTATATATGCTACCTTGATTAAGGCTTATGTCCAAGAAAGTAGATTTGAAGGTGCAATAGAATTACTAAAAAGGATGATAGCAAATGGGGTTCTGCCTGATTTGTTTTGCTATAATTCTCTTATAATTGGTCTTTGTAGAGCGAAGAAGGTGGAAGAAGCAAAAATGTTGCTTGTTGAGATGGGTGAGAAAGGAATAAAACCTAATGCATATACTTATGGAGCTTTTATTAGTTTATATGGTAAATCAGGTGAAATCCAAGTTGCAGAAAGGTATTTCCAAGACATGCTATCTTCTGGTATAGTGCCTAACAACGTAATCTATACTGCTTTGATTGATGGGCATTGCAATGTCGGAAATACGGTAGAAGCTTTGTCAACTTTCAAATGCATGCTTGAGAAAGGGTTGATTCCCGACGTCCAAACATACAGTGCACTAATTCACGTTCTCTCCAAGAATGGGAAAACCGAAGGAGCCATGGGGGTTTTCTCAGAATTCCTTAACAAGGGTTTGGTGCCTGACGTTTTTATATACAACTCTCTCATATCTGGTTTCTGCAAGAAAGGTGAGATTGAGAAGGCATCCCAACTTTATGAAGAGATGCTACTTAATGGAATTATTCCCAACATTGTCACATACAACACCTTGATTAATGGACTGTGCAAACTTGGTGAGGTAAAGAAAGCAAGGGAACTTTTTGACAAAATTAAAGGAAAAGATCTGGTTCCCAATGTTGTTACTTACTCAACAATCGTAGATGGATATTGCAAATCTGGAAACTTAATCGAGGCATTTAAACTGTTCGATGAAATGATATTGAAAGGAATTCCTCCCGATTGTCACATCTACTGTATCCTCATTGACGGTTGTGGCAAGGAAGGAAATTTGGAGAAGGCACTTTCTTTATTTCACGAAGCACTGCAGAAAAGTGTTTCTTCCTCTTCTGCTTTCAACTCTTTGATTGATGGTTTCTGCAAACTTGGAAAAGTTATTGAAGCTAGGGAGTTGTTTGATGATATGGTAGATAAAAAAGTCATACCGAATAGTGTGACGTACACAATTCTGATTGATGCATACGGCAAAGCAGAAATGATAGAGGAAGCAGAGCAGCTTTTTCTAGATATGGAAACGAGAAATATCATACCGAATACTCTTACATATACTTCACTTTTACTCGGTTATAACCAGATAGGAAACAGATTTAAGATGATTTCTTTGTTCAAGGATATGGAAGCTAGGGGGATTGCTTGTGATGCAATAGCATATGGTGTGATGGCTAGTGTCTACTGCAAGGAAGGAAATTCTCTTGAAGCCTTGAAGTTGCTCGACAAAAGCTTGGTTGAGGGTATAAAGTTGGACGATGATGTGTTTGATGCATTAACATTTCACCTCTGCAAGGAAGAAAAAATATCTACCATACTGGAGTTACTTGATGAAAGGGGAAAAGAAGAAATTTCTCTTAGCTCTACTACATGTAATGCTCTTTTACTTGGTTTTTACAATGCGGGCAATGAAGAGGAAGCTTCAAAGGTTCTTGGCACTATGCAAAGGTTGGGATGGGTTCCAGCCTCTTTAAGCTTAACTGATTCACTAAGTGCTGGTAGAAACGATATGAAATCCGACAATTTCCCGAGTATTGCAATGCAAATAGGGTCCGTGTAG

Coding sequence (CDS)

ATGGCTAATGCTTTGTGCTTGATTCGGCAAATGGCTGCAAATTCGCACCTTTGCAGAATTCTCAGTAGTTCCCCTTCCCTAATCGGGAATAATTTTTGTACCCATGTTATGTTTTTCTCGACCACTAACCCATCTGATCATTACGATGACACTGTTCGCGAATTTTCCACGATCTTGAAGCGTAAAGATTGGCAGATCCTTTTAAACAACGAGGAAAGTTTGAGGAAGCTAAACCCAGAAATCGTCTGCTCTGTTGTACAGAAGAACGAAATCGATGACCCTGTGCGGCTTCAAAATTTCTTCTATTGGTCGACTTCCAAAATGGGTACTTCACAAAACTTGCATTCTTATTCTATTCTTGCGATTCGTCTTTGTAATTCTGGGCTTTTCCTCCGTGCCGATAACATGTTTGAGAAATTGCTTGAGACCCGTAAACCGCCGTTGGAGATTTTAGATTCCTTGGTTAGATGCTATAGAGAATGTGGTGGGTCTAACTTGACTGTTTTTGATATTTTGATTGATAACTTTAGGCAGTTGGGTTTCTTGAATGAGGCCTCTAGTGTTTTTATAGCTTCCATTAGTGGAGGATTCTTTCCCAGTTTGATATGCTGTAATAGTTTGATGAGGGATTTATTGAAGAGTAACATGATGGGGTTGTTTTGGAAGGTGTATGGAAGTATGGTGGAGGCTAAGATAGTTCCTGATGTTTATACATACACTAATGTGATCAATGCGCATTGTAAAGTTGGTGATGTTATCAAGGGAAAGATGGTTCTTTCTGAGATGGAGGAGAAGGAATGTAAACCTAATTTGGTTACCTACAATGTTATTATTGGGGGTTTATGTCGGACTGGAGCTGTTGATGAAGCTTTAGAGGTAAAGAAGTTGATGATGGAGAAGGGATTGGTTCCAGATGGCTATACTTATTCTTTACTTATTGATGGGTTTTGCAAACAGAAGAGATCAGAAGAAGCAAAATTGATATTCGAAAGTATGCTTAGTTCGGGTTTAAATCCTAATCATTTTACCTGCACTGCTTTGGTTGATGGGTTCATGAAACAAGGGAATATTGACGAGGCATTGAGGATCAAAGATGAGATGATTACTCGTGGACTTAAGTTGAACATTGTAACTTATAATGCAATGATCAGGAGCATTGCTAAGGCTGGTGAGATGGGGAAAGCAATGGCTCTTTTCAACGAGATGTTTATGACTGGCATAGAACCAGATACCTGGACCTACAACTCAATGATTGATGGATATTTGAAGTCTCACGATGTGGCTAAAGCTTATGAGCTCCTAGCTGAGATGAAAGCAAGGAATTTGATGCCATCGTCGTTCACTTATAGTGTGCTTATTAGTGGCCTTTGTCGTTCCAGTGATCTACAAAAGGCTAATGAAGTTTTGCAGCAAATGATCAGGAACGGGGTGAAACCGAATGCTGTTATATATGCTACCTTGATTAAGGCTTATGTCCAAGAAAGTAGATTTGAAGGTGCAATAGAATTACTAAAAAGGATGATAGCAAATGGGGTTCTGCCTGATTTGTTTTGCTATAATTCTCTTATAATTGGTCTTTGTAGAGCGAAGAAGGTGGAAGAAGCAAAAATGTTGCTTGTTGAGATGGGTGAGAAAGGAATAAAACCTAATGCATATACTTATGGAGCTTTTATTAGTTTATATGGTAAATCAGGTGAAATCCAAGTTGCAGAAAGGTATTTCCAAGACATGCTATCTTCTGGTATAGTGCCTAACAACGTAATCTATACTGCTTTGATTGATGGGCATTGCAATGTCGGAAATACGGTAGAAGCTTTGTCAACTTTCAAATGCATGCTTGAGAAAGGGTTGATTCCCGACGTCCAAACATACAGTGCACTAATTCACGTTCTCTCCAAGAATGGGAAAACCGAAGGAGCCATGGGGGTTTTCTCAGAATTCCTTAACAAGGGTTTGGTGCCTGACGTTTTTATATACAACTCTCTCATATCTGGTTTCTGCAAGAAAGGTGAGATTGAGAAGGCATCCCAACTTTATGAAGAGATGCTACTTAATGGAATTATTCCCAACATTGTCACATACAACACCTTGATTAATGGACTGTGCAAACTTGGTGAGGTAAAGAAAGCAAGGGAACTTTTTGACAAAATTAAAGGAAAAGATCTGGTTCCCAATGTTGTTACTTACTCAACAATCGTAGATGGATATTGCAAATCTGGAAACTTAATCGAGGCATTTAAACTGTTCGATGAAATGATATTGAAAGGAATTCCTCCCGATTGTCACATCTACTGTATCCTCATTGACGGTTGTGGCAAGGAAGGAAATTTGGAGAAGGCACTTTCTTTATTTCACGAAGCACTGCAGAAAAGTGTTTCTTCCTCTTCTGCTTTCAACTCTTTGATTGATGGTTTCTGCAAACTTGGAAAAGTTATTGAAGCTAGGGAGTTGTTTGATGATATGGTAGATAAAAAAGTCATACCGAATAGTGTGACGTACACAATTCTGATTGATGCATACGGCAAAGCAGAAATGATAGAGGAAGCAGAGCAGCTTTTTCTAGATATGGAAACGAGAAATATCATACCGAATACTCTTACATATACTTCACTTTTACTCGGTTATAACCAGATAGGAAACAGATTTAAGATGATTTCTTTGTTCAAGGATATGGAAGCTAGGGGGATTGCTTGTGATGCAATAGCATATGGTGTGATGGCTAGTGTCTACTGCAAGGAAGGAAATTCTCTTGAAGCCTTGAAGTTGCTCGACAAAAGCTTGGTTGAGGGTATAAAGTTGGACGATGATGTGTTTGATGCATTAACATTTCACCTCTGCAAGGAAGAAAAAATATCTACCATACTGGAGTTACTTGATGAAAGGGGAAAAGAAGAAATTTCTCTTAGCTCTACTACATGTAATGCTCTTTTACTTGGTTTTTACAATGCGGGCAATGAAGAGGAAGCTTCAAAGGTTCTTGGCACTATGCAAAGGTTGGGATGGGTTCCAGCCTCTTTAAGCTTAACTGATTCACTAAGTGCTGGTAGAAACGATATGAAATCCGACAATTTCCCGAGTATTGCAATGCAAATAGGGTCCGTGTAG

Protein sequence

MANALCLIRQMAANSHLCRILSSSPSLIGNNFCTHVMFFSTTNPSDHYDDTVREFSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTILELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSAGRNDMKSDNFPSIAMQIGSV

Homology

[Close]

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 9.3e-211
Identity = 398/984 (40.45%), Postives = 594/984 (60.37%), Query Frame = 0


Query: 36   VMFFSTTNPSDHYDDTVREFSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPV 95
            ++F S +   +   D   E + ILK+++W+  L +     ++NPE+V SV++   +DDP 
Sbjct: 19   LLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPS 78

Query: 96   RLQNFFYWSTSKMGTSQNLHSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLV 155
            +L +FF W  S+  T Q L S+S LA+ LCN G F +A ++ E+++E   P  E+  S+V
Sbjct: 79   KLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV 138

Query: 156  RCYRECGG--SNLTVFDILIDNFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLK 215
            RC +E  G   +  +F IL D +   G++ EA  VF +S+     P L  C  L+  LL+
Sbjct: 139  RCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLR 198

Query: 216  SNMMGLFWKVYGSMVEAKIVPDVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVT 275
             N + LFW VY  MVE  +V DV TY  +I AHC+ G+V  GK VL + E++       T
Sbjct: 199  WNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTAT 258

Query: 276  YNVIIGGLCRTGAVDEALEVKKLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESML 335
             N           VD AL++K+ M+ KGLVP  YTY +LIDG CK KR E+AK +   M 
Sbjct: 259  LN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 318

Query: 336  SSGLNPNHFTCTALVDGFMKQGNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMG 395
            S G++ ++ T + L+DG +K  N D A  +  EM++ G+ +    Y+  I  ++K G M 
Sbjct: 319  SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 378

Query: 396  KAMALFNEMFMTGIEPDTWTYNSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLI 455
            KA ALF+ M  +G+ P    Y S+I+GY +  +V + YELL EMK RN++ S +TY  ++
Sbjct: 379  KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 438

Query: 456  SGLCRSSDLQKANEVLQQMIRNGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVL 515
             G+C S DL  A  ++++MI +G +PN VIY TLIK ++Q SRF  A+ +LK M   G+ 
Sbjct: 439  KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 498

Query: 516  PDLFCYNSLIIGLCRAKKVEEAKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERY 575
            PD+FCYNSLIIGL +AK+++EA+  LVEM E G+KPNA+TYGAFIS Y ++ E   A++Y
Sbjct: 499  PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 558

Query: 576  FQDMLSSGIVPNNVIYTALIDGHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSK 635
             ++M   G++PN V+ T LI+ +C  G  +EA S ++ M+++G++ D +TY+ L++ L K
Sbjct: 559  VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 618

Query: 636  NGKTEGAMGVFSEFLNKGLVPDVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVT 695
            N K + A  +F E   KG+ PDVF Y  LI+GF K G ++KAS +++EM+  G+ PN++ 
Sbjct: 619  NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 678

Query: 696  YNTLINGLCKLGEVKKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMI 755
            YN L+ G C+ GE++KA+EL D++  K L PN VTY TI+DGYCKSG+L EAF+LFDEM 
Sbjct: 679  YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 738

Query: 756  LKGIPPDCHIYCILIDGCGKEGNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIE 815
            LKG+ PD  +Y  L+DGC +  ++E+A+++F    +   SS++ FN+LI+   K GK   
Sbjct: 739  LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 798

Query: 816  ARE----LFDDMVDKKVIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYT 875
              E    L D   D+   PN VTY I+ID   K   +E A++LF  M+  N++P  +TYT
Sbjct: 799  KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 858

Query: 876  SLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVE 935
            SLL GY+++G R +M  +F +  A GI  D I Y V+ + + KEG + +AL L+D+   +
Sbjct: 859  SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 918

Query: 936  GIKLDDDVFDALTFHLCKEEKISTILELLDERGKEEISLSSTTCNALLLGFYNAGNEEEA 995
               +DD          CK                    LS +TC ALL GF   G  E A
Sbjct: 919  N-AVDDG---------CK--------------------LSISTCRALLSGFAKVGEMEVA 958

Query: 996  SKVLGTMQRLGWVPASLSLTDSLS 1014
             KV+  M RL ++P S ++ + ++
Sbjct: 979  EKVMENMVRLQYIPDSATVIELIN 958

[Close]

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.0e-116
Identity = 258/839 (30.75%), Postives = 432/839 (51.49%), Query Frame = 0


Query: 61  RKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSIL 120
           ++ W+I L++E   R+L    V  ++    IDDP     FF +     G   +  S+ IL
Sbjct: 52  KRSWEIALSSELVSRRLKTVHVEEIL-IGTIDDPKLGLRFFNFLGLHRGFDHSTASFCIL 111

Query: 121 AIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLG 180
              L  + LF  A ++ + LL     P ++ + L  CY +C  S+ + FD+LI ++ +  
Sbjct: 112 IHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSR 171

Query: 181 FLNEASSVFIASISG-GFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTY 240
            + +   VF   I+     P +   ++L+  L+K    GL  +++  MV   I PDVY Y
Sbjct: 172 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 231

Query: 241 TNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMME 300
           T VI + C++ D+ + K +++ ME   C  N+V YNV+I GLC+   V EA+ +KK +  
Sbjct: 232 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 291

Query: 301 KGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDE 360
           K L PD  TY  L+ G CK +  E    + + ML    +P+    ++LV+G  K+G I+E
Sbjct: 292 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 351

Query: 361 ALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMID 420
           AL +   ++  G+  N+  YNA+I S+ K  +  +A  LF+ M   G+ P+  TY+ +ID
Sbjct: 352 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 411

Query: 421 GYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKP 480
            + +   +  A   L EM    L  S + Y+ LI+G C+  D+  A   + +MI   ++P
Sbjct: 412 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 471

Query: 481 NAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLL 540
             V Y +L+  Y  + +   A+ L   M   G+ P ++ + +L+ GL RA  + +A  L 
Sbjct: 472 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 531

Query: 541 VEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNV 600
            EM E  +KPN  TY   I  Y + G++  A  + ++M   GIVP+   Y  LI G C  
Sbjct: 532 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 591

Query: 601 GNTVEALSTFKCMLEKGLIP-DVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFI 660
           G   EA   F   L KG    +   Y+ L+H   + GK E A+ V  E + +G+  D+  
Sbjct: 592 GQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 651

Query: 661 YNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIK 720
           Y  LI G  K  + +    L +EM   G+ P+ V Y ++I+   K G+ K+A  ++D + 
Sbjct: 652 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 711

Query: 721 GKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGK-EGNL 780
            +  VPN VTY+ +++G CK+G + EA  L  +M      P+   Y   +D   K E ++
Sbjct: 712 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 771

Query: 781 EKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILI 840
           +KA+ L +  L+  +++++ +N LI GFC+ G++ EA EL   M+   V P+ +TYT +I
Sbjct: 772 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 831

Query: 841 DAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGI 897
           +   +   +++A +L+  M  + I P+ + Y +L+ G    G   K   L  +M  +G+
Sbjct: 832 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

[Close]

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 382.1 bits (980), Expect = 2.0e-104
Identity = 231/843 (27.40%), Postives = 394/843 (46.74%), Query Frame = 0


Query: 150 ILDSLVRCYRECGGSNLTVFDILIDNFRQLGFLNEASSVFIASISGGFFPSLICCNSLMR 209
           +  +L+  YR C  SN +V+DILI  + + G + ++  +F      GF PS+  CN+++ 
Sbjct: 108 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 167

Query: 210 DLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKP 269
            ++KS      W     M++ KI PDV T+  +IN  C  G   K   ++ +ME+    P
Sbjct: 168 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 227

Query: 270 NLVTYNVIIGGLCRTGAVDEALEVKKLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIF 329
            +VTYN ++   C+ G    A+E+   M  KG+  D  TY++LI   C+  R  +  L+ 
Sbjct: 228 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 287

Query: 330 ESMLSSGLNPNHFTCTALVDGFMKQGNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKA 389
             M    ++PN                                    VTYN +I   +  
Sbjct: 288 RDMRKRMIHPNE-----------------------------------VTYNTLINGFSNE 347

Query: 390 GEMGKAMALFNEMFMTGIEPDTWTYNSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTY 449
           G++  A  L NEM   G+ P+  T+N++IDG++   +  +A ++   M+A+ L PS  +Y
Sbjct: 348 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 407

Query: 450 SVLISGLCRSSDLQKANEVLQQMIRNGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIA 509
            VL+ GLC++++   A     +M RNGV    + Y  +I    +    + A+ LL  M  
Sbjct: 408 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 467

Query: 510 NGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQV 569
           +G+ PD+  Y++LI G C+  + + AK ++  +   G+ PN   Y   I    + G ++ 
Sbjct: 468 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 527

Query: 570 AERYFQDMLSSGIVPNNVIYTALIDGHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIH 629
           A R ++ M+  G   ++  +  L+   C  G   EA    +CM   G++P+  ++  LI+
Sbjct: 528 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 587

Query: 630 VLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIP 689
               +G+   A  VF E    G  P  F Y SL+ G CK G + +A +  + +       
Sbjct: 588 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 647

Query: 690 NIVTYNTLINGLCKLGEVKKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLF 749
           + V YNTL+  +CK G + KA  LF ++  + ++P+  TY++++ G C+ G  + A    
Sbjct: 648 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 707

Query: 750 DEMILKG-IPPDCHIYCILIDGCGKEGNLEKALSLFHEALQK--SVSSSSAFNSLIDGFC 809
            E   +G + P+  +Y   +DG  K G   KA   F E +            N++IDG+ 
Sbjct: 708 KEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYS 767

Query: 810 KLGKVIEARELFDDMVDKKVIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTL 869
           ++GK+ +  +L  +M ++   PN  TY IL+  Y K + +  +  L+  +    I+P+ L
Sbjct: 768 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 827

Query: 870 TYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDKS 929
           T  SL+LG  +       + + K    RG+  D   + ++ S  C  G    A  L+   
Sbjct: 828 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 887

Query: 930 LVEGIKLDDDVFDALTFHLCKEEKISTILELLDERGKEEISLSSTTCNALLLGFYNAGNE 989
              GI LD D  DA+   L +  +      +L E  K+ IS  S     L+ G    G+ 
Sbjct: 888 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 913

[Close]

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.4e-102
Identity = 258/899 (28.70%), Postives = 419/899 (46.61%), Query Frame = 0


Query: 181  FLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYT 240
            F  EA  V+   I  GF PSL   +SLM  L K   +     +   M    + P+VYT+T
Sbjct: 203  FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262

Query: 241  NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEK 300
              I    + G + +   +L  M+++ C P++VTY V+I  LC    +D A EV + M   
Sbjct: 263  ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322

Query: 301  GLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEA 360
               PD  TY  L+D F   +  +  K  +  M   G  P+  T T LVD   K GN  EA
Sbjct: 323  RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382

Query: 361  LRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDG 420
                D M  +G+  N+ TYN +I  + +   +  A+ LF  M   G++P  +TY   ID 
Sbjct: 383  FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442

Query: 421  YLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPN 480
            Y KS D   A E   +MK + + P+    +  +  L ++   ++A ++   +   G+ P+
Sbjct: 443  YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 481  AVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLV 540
            +V Y  ++K Y +    + AI+LL  M+ NG  PD+   NSLI  L +A +V+EA  + +
Sbjct: 503  SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 541  EMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVG 600
             M E  +KP   TY   ++  GK+G+IQ A   F+ M+  G  PN + +  L D  C   
Sbjct: 563  RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622

Query: 601  NTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDV---- 660
                AL     M++ G +PDV TY+ +I  L KNG+ + AM  F + + K + PD     
Sbjct: 623  EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLC 682

Query: 661  ---------------------FIYNS--------------------------------LI 720
                                 F+YN                                 + 
Sbjct: 683  TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 742

Query: 721  SGFCKKGE---------------IEKASQLYEEMLLN-GIIPNIVTYNTLINGLCKLGEV 780
            +G C+ G+               +  A  L+E+   + G+ P + TYN LI GL +   +
Sbjct: 743  NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 802

Query: 781  KKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCIL 840
            + A+++F ++K    +P+V TY+ ++D Y KSG + E F+L+ EM       +   + I+
Sbjct: 803  EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 862

Query: 841  IDGCGKEGNLEKALSLFHEALQKSVSSSSA--FNSLIDGFCKLGKVIEARELFDDMVDKK 900
            I G  K GN++ AL L+++ +     S +A  +  LIDG  K G++ EA++LF+ M+D  
Sbjct: 863  ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 922

Query: 901  VIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMI 960
              PN   Y ILI+ +GKA   + A  LF  M    + P+  TY+ L+     +G   + +
Sbjct: 923  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 982

Query: 961  SLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDK-SLVEGIKLDDDVFDALTFH 1004
              FK+++  G+  D + Y ++ +   K     EAL L ++     GI  D   +++L  +
Sbjct: 983  HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1042

[Close]

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.7e-101
Identity = 205/682 (30.06%), Postives = 362/682 (53.08%), Query Frame = 0


Query: 184 EASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEA---KIVPDVYTYT 243
           +A  VF   +  G   S+   N  + D+ + +      + Y  M  A   ++ PD+ TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTYG 92

Query: 244 NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALE-VKKLMME 303
            +I   C+ G +  G   L  + +K  + + + +  ++ GLC      +A++ V + M E
Sbjct: 93  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 152

Query: 304 KGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESML---SSGLNPNHFTCTALVDGFMKQGN 363
            G +P+ ++Y++L+ G C + RS+EA  +   M      G  P+  + T +++GF K+G+
Sbjct: 153 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 212

Query: 364 IDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNS 423
            D+A     EM+ RG+  ++VTYN++I ++ KA  M KAM + N M   G+ PD  TYNS
Sbjct: 213 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 272

Query: 424 MIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNG 483
           ++ GY  S    +A   L +M++  + P   TYS+L+  LC++    +A ++   M + G
Sbjct: 273 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 332

Query: 484 VKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAK 543
           +KP    Y TL++ Y  +        LL  M+ NG+ PD + ++ LI    +  KV++A 
Sbjct: 333 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 392

Query: 544 MLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGH 603
           ++  +M ++G+ PNA TYGA I +  KSG ++ A  YF+ M+  G+ P N++Y +LI G 
Sbjct: 393 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 452

Query: 604 CNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDV 663
           C       A      ML++G+  +   ++++I    K G+   +  +F   +  G+ P+V
Sbjct: 453 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 512

Query: 664 FIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDK 723
             YN+LI+G+C  G++++A +L   M+  G+ PN VTY+TLING CK+  ++ A  LF +
Sbjct: 513 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 572

Query: 724 IKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGN 783
           ++   + P+++TY+ I+ G  ++     A +L+  +   G   +   Y I++ G  K   
Sbjct: 573 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 632

Query: 784 LEKALSLFHE-ALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTI 843
            + AL +F    L      +  FN +ID   K+G+  EA++LF       ++PN  TY +
Sbjct: 633 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 692

Query: 844 LIDAYGKAEMIEEAEQLFLDME 858
           + +      ++EE +QLFL ME
Sbjct: 693 MAENIIGQGLLEELDQLFLSME 713

[Close]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL
Match: A0A1S3BDQ1 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488761 PE=4 SV=1)

HSP 1 Score: 1758.8 bits (4554), Expect = 0.0e+00
Identity = 883/1028 (85.89%), Postives = 941/1028 (91.54%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MANALCLIRQMA NS    ILS+ P        I NNF   +MFFST NPSDHY+DTVRE
Sbjct: 1    MANALCLIRQMAVNSSPRGILSTFPLRTTSFPQIWNNFSIRLMFFSTNNPSDHYEDTVRE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
            FS ILKRKDW ILLNNE+SLRKLNPE+VCSV+QK+EIDD VRLQNFFYWS+SKM T QNL
Sbjct: 61   FSMILKRKDWVILLNNEDSLRKLNPEVVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQNL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
             SYSILAIRLCNSGL  +A NM EKLLETRKPPLEILDSLVRCYRE GGSNLTVFDI ID
Sbjct: 121  LSYSILAIRLCNSGLIHQAQNMLEKLLETRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
            NFR  GFLNEASSVFIASIS GFFPSL+CCN+LMRDLLK NMMGLFWKVYGSM+EAKIVP
Sbjct: 181  NFRMFGFLNEASSVFIASISEGFFPSLMCCNNLMRDLLKGNMMGLFWKVYGSMLEAKIVP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVINAHCKVGDVIKGKMVLSEME+KECKPNL+TYNV+IGGLCRTGA+DEALEVK
Sbjct: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEKKECKPNLITYNVVIGGLCRTGALDEALEVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            KLMMEKGL PDGYTY+LLIDGFCKQKRS+EAKLIFESMLSSG NPNHFTC+AL+DGFMK+
Sbjct: 301  KLMMEKGLGPDGYTYTLLIDGFCKQKRSKEAKLIFESMLSSGSNPNHFTCSALIDGFMKE 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            G I+EAL IKDEMITRGLKLN+VTYNAMI  IAKAGEMGKAMALFNEM M GIEPDTWTY
Sbjct: 361  GTIEEALSIKDEMITRGLKLNVVTYNAMIGGIAKAGEMGKAMALFNEMLMAGIEPDTWTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            N++IDGYLKSHD+AKA ELLAEMKARNLM S FT SVLISGLC   DLQKANEVL QMIR
Sbjct: 421  NTLIDGYLKSHDMAKACELLAEMKARNLMLSPFTCSVLISGLCHCGDLQKANEVLDQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            +GVKP+  +Y TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEE
Sbjct: 481  SGVKPSVFMYGTLIKAYVQESRYETAIELLKVMIANGVLPDLFCYNCLIIGLCRAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AKMLLV+MGEKGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI+
Sbjct: 541  AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIN 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            G+C+VGNTVEALSTFKCM EKGLIPDV+ YSA+IH LSKNGKT+ AMGVF EFL KGL P
Sbjct: 601  GYCDVGNTVEALSTFKCMFEKGLIPDVRAYSAIIHSLSKNGKTKEAMGVFLEFLKKGLAP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVF+YNSLISGFCK+G+IEKASQLYEEML NGI PNIV YNTLINGLCKLGEVKKARELF
Sbjct: 661  DVFLYNSLISGFCKEGDIEKASQLYEEMLHNGINPNIVVYNTLINGLCKLGEVKKARELF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            DKI+GKDLVPNVVTYSTIVDGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKE
Sbjct: 721  DKIEGKDLVPNVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEALQKSV+S SAFNSLID FCK GKVIEARELFDDMVDKKV PNSVTYT
Sbjct: 781  GNLEKALSLFHEALQKSVASLSAFNSLIDSFCKHGKVIEARELFDDMVDKKVTPNSVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAYG+AEM+EEAEQLFLDME RNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR
Sbjct: 841  ILIDAYGRAEMMEEAEQLFLDMEMRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAIAYGVMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+
Sbjct: 901  GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            LELL E GKEE+SLSS TCNALLLGF+N+GNE+EASKVLG MQRLGWVP SLSLTDS+S 
Sbjct: 961  LELLTEMGKEELSLSSKTCNALLLGFFNSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1020

Query: 1021 GRNDMKSD 1023
            GRNDMKSD
Sbjct: 1021 GRNDMKSD 1028

[Close]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL
Match: A0A5A7SXZ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00520 PE=4 SV=1)

HSP 1 Score: 1739.5 bits (4504), Expect = 0.0e+00
Identity = 873/1018 (85.76%), Postives = 930/1018 (91.36%), Query Frame = 0


Query: 11   MAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVREFSTILKRKDW 70
            MA NS    ILS+ P        I NNF   +MFFST NPSDHY+DTVREFS ILKRKDW
Sbjct: 1    MAVNSSPRGILSTFPLRTTNFPQIWNNFSIRLMFFSTNNPSDHYEDTVREFSMILKRKDW 60

Query: 71   QILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSILAIRL 130
             ILLNNE+SLRKLNPE+VCSV+QK+EIDD VRLQNFFYWS+SKM T QNL SYSILAIRL
Sbjct: 61   VILLNNEDSLRKLNPEVVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQNLLSYSILAIRL 120

Query: 131  CNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLGFLNE 190
            CNSGL  +A NM EKLLETRKPPLEILDSLVRCYRE GGSNLTVFDI IDNFR  GFLNE
Sbjct: 121  CNSGLIHQAQNMLEKLLETRKPPLEILDSLVRCYREFGGSNLTVFDIFIDNFRMFGFLNE 180

Query: 191  ASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTNVIN 250
            ASSVFIASIS GFFPSL+CCN+LMRDLLK NMMGLFWKVYGSM+EAKIVPDVYTYTNVIN
Sbjct: 181  ASSVFIASISEGFFPSLMCCNNLMRDLLKGNMMGLFWKVYGSMLEAKIVPDVYTYTNVIN 240

Query: 251  AHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEKGLVP 310
            AHCKVGDVIKGKMVLSEME+KECKPNL+TYNV+IGGLCRTGAVDEALEVKKLMMEKGL P
Sbjct: 241  AHCKVGDVIKGKMVLSEMEKKECKPNLITYNVVIGGLCRTGAVDEALEVKKLMMEKGLGP 300

Query: 311  DGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEALRIK 370
            DGYTY+LLIDGFCKQKRS+EAKLIFESMLSSG NPNHFTC+AL+DGFMK+G I+EAL IK
Sbjct: 301  DGYTYTLLIDGFCKQKRSKEAKLIFESMLSSGSNPNHFTCSALIDGFMKEGTIEEALSIK 360

Query: 371  DEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDGYLKS 430
            +EMITRGLKLN+VTYNAMI  IAKAGEMGKAMALFNEM M GIEPDTWTYN++IDGYLKS
Sbjct: 361  NEMITRGLKLNVVTYNAMIGGIAKAGEMGKAMALFNEMLMAGIEPDTWTYNTLIDGYLKS 420

Query: 431  HDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPNAVIY 490
            HD AKA ELLAEMKARNLM S FT SVLISGLC   DLQKANEVL QMIR+GVKP+  +Y
Sbjct: 421  HDTAKACELLAEMKARNLMLSPFTCSVLISGLCHCGDLQKANEVLDQMIRSGVKPSVFMY 480

Query: 491  ATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVEMGE 550
             TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEEAKMLLV+MGE
Sbjct: 481  GTLIKAYVQESRYETAIELLKVMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 540

Query: 551  KGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVGNTVE 610
            KGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI+G+C+VGNTVE
Sbjct: 541  KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILINGYCDVGNTVE 600

Query: 611  ALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNSLIS 670
            ALSTFKCM EKGLIPDV+ YSA+IH LSKNGKT+ AMGVF EFL KGL PDVF+YNSLIS
Sbjct: 601  ALSTFKCMFEKGLIPDVRAYSAIIHSLSKNGKTKEAMGVFLEFLKKGLAPDVFLYNSLIS 660

Query: 671  GFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIKGKDLVP 730
            GFCK+G+IEKASQLYEEML NGI PNIV YNTLINGLCKLGEVKKARELFDKI+GKDLVP
Sbjct: 661  GFCKEGDIEKASQLYEEMLHNGINPNIVVYNTLINGLCKLGEVKKARELFDKIEGKDLVP 720

Query: 731  NVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGNLEKALSLF 790
            NVVTYSTIVDGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKEGNLEKALSLF
Sbjct: 721  NVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 780

Query: 791  HEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILIDAYGKAE 850
            HEALQKSV+S SAFNSLID FCK GKVIEARELFDDMVDKKV PNSVTYTILIDAYG+AE
Sbjct: 781  HEALQKSVASLSAFNSLIDSFCKHGKVIEARELFDDMVDKKVTPNSVTYTILIDAYGRAE 840

Query: 851  MIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG 910
            M+EEAEQLFLDME RNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG
Sbjct: 841  MMEEAEQLFLDMEMRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG 900

Query: 911  VMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTILELLDERGKE 970
            VMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+LELL E GKE
Sbjct: 901  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLTEMGKE 960

Query: 971  EISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSAGRNDMKSD 1023
            E+SLSS TCNALLLGF+N+GNE+EASKVLG MQRLGWVP SLSLTDS+S GRNDMKSD
Sbjct: 961  ELSLSSKTCNALLLGFFNSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRNDMKSD 1018

[Close]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL
Match: A0A0A0KPZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175760 PE=4 SV=1)

HSP 1 Score: 1729.9 bits (4479), Expect = 0.0e+00
Identity = 871/1028 (84.73%), Postives = 932/1028 (90.66%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MANALCLIRQ+AANS   RILS+ P        I NN   H MFFST NP DHYDDTVRE
Sbjct: 1    MANALCLIRQIAANSSPRRILSTFPFQTTSFPQIWNNVSIHFMFFSTNNPFDHYDDTVRE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
            FS ILKRKDWQILLNNE+++RKLNPEIVCSV+QK+EIDD VRLQNFFYWS+SKM T Q L
Sbjct: 61   FSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
            HSYSILAIRLCNSGL  +ADNM EKLL+TRKPPLEILDSLVRCYRE GGSNLTVFDI ID
Sbjct: 121  HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
             FR LGFLNEASSVFIASIS GFFP+LICCN+LMRDLLK+NMMGLFWKVYGSMVEAKIVP
Sbjct: 181  KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVI AHCKVGDVIKGKMVLSEM EKECKPNL TYN  IGGLC+TGAVDEALEVK
Sbjct: 241  DVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            KLMMEKGL PDG+TY+LL+DGFCKQKRS+EAKLIFESM SSGLNPN FT TAL+DGF+K+
Sbjct: 301  KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            GNI+EALRIKDEMITRGLKLN+VTYNAMI  IAKAGEM KAM+LFNEM M G+EPDTWTY
Sbjct: 361  GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            N +IDGYLKSHD+AKA ELLAEMKAR L PS FTYSVLISGLC SSDLQKANEVL QMIR
Sbjct: 421  NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            NGVKPN  +Y TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEE
Sbjct: 481  NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AKMLLV+MGEKGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI 
Sbjct: 541  AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            GHC+VGNTVEALSTFKCMLEKGLIPD++ YSA+IH LSKNGKT+ AMGVF +FL  G+VP
Sbjct: 601  GHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVF+YNSLISGFCK+G+IEKASQLY+EML NGI PNIV YNTLINGLCKLGEV KARELF
Sbjct: 661  DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            D+I+ KDLVP+VVTYSTI+DGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKE
Sbjct: 721  DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEA QKSV S SAFNSLID FCK GKVIEARELFDDMVDKK+ PN VTYT
Sbjct: 781  GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAYGKAEM+EEAEQLFLDMETRNIIPNTLTYTSLLL YNQIGNRFKMISLFKDMEAR
Sbjct: 841  ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAIAYGVMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+
Sbjct: 901  GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            LELL E GKEE+SLSS TCN LLLGFY +GNE+EASKVLG MQRLGWVP SLSLTDS+S 
Sbjct: 961  LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1020

Query: 1021 GRNDMKSD 1023
            GR+DMKSD
Sbjct: 1021 GRDDMKSD 1027

[Close]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL
Match: A0A6J1CEU1 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010080 PE=3 SV=1)

HSP 1 Score: 1718.4 bits (4449), Expect = 0.0e+00
Identity = 848/1040 (81.54%), Postives = 941/1040 (90.48%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MAN++CLIRQMA NSH  R L S P        I N+ C H MFFSTTN  D  D+TV E
Sbjct: 1    MANSMCLIRQMAVNSHPRRKLCSFPLQNTNFPQIANDVCIHFMFFSTTNTPDRNDETVHE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
             STILKR DWQILLN++++LRKLNPEIV SV+ KNEI DPVRLQ+FFYWS+SKMGT QNL
Sbjct: 61   ISTILKRSDWQILLNSQDNLRKLNPEIVRSVLHKNEIGDPVRLQSFFYWSSSKMGTPQNL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
            HSYSILAI LC+SGLF RADN+FEK+LETRKPPLEIL+SLV+C RECGGSNL VFDILID
Sbjct: 121  HSYSILAIHLCSSGLFPRADNLFEKMLETRKPPLEILESLVKCCRECGGSNLIVFDILID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
            NFR+LGFL EASSVF+ASI+GGF PSLICCN LMRDLLK N+MGLFWKVYG MVEAKI P
Sbjct: 181  NFRKLGFLKEASSVFLASINGGFLPSLICCNGLMRDLLKGNLMGLFWKVYGGMVEAKIAP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVINA+CKVGDV+KG+MVLSEMEEK CKPN VTYNVIIGGLCRTGAVDEAL VK
Sbjct: 241  DVYTYTNVINAYCKVGDVVKGRMVLSEMEEKGCKPNSVTYNVIIGGLCRTGAVDEALAVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            + MMEKGLVPDGYTYS+LIDGFCKQKRSEEAKLI ES+L SGLNPNHFT TAL+DGFMKQ
Sbjct: 301  RSMMEKGLVPDGYTYSILIDGFCKQKRSEEAKLILESVLYSGLNPNHFTYTALIDGFMKQ 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            GNI+EALRIKDEMI+RGLKLN+VTYNA+IR I+KAGEM KAMALFNEM MT +EPDT TY
Sbjct: 361  GNIEEALRIKDEMISRGLKLNVVTYNAIIRGISKAGEMEKAMALFNEMLMTSVEPDTRTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            +S+IDGYLKSHD+AKAYELLAEMKARNLMPS FTYSVLI+G CRS DLQKAN+VL+QMIR
Sbjct: 421  DSLIDGYLKSHDMAKAYELLAEMKARNLMPSLFTYSVLINGFCRSGDLQKANKVLEQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            NG+KPNAVIYATLIKAYVQE R+EGAIE+L+ M ANGVLPD+FCYNSLIIGLC+AKKVEE
Sbjct: 481  NGLKPNAVIYATLIKAYVQEGRYEGAIEVLRGMTANGVLPDVFCYNSLIIGLCKAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AK+LLV+MGEKGIKP+AYTYGAFI++Y K+GEIQVAERYF++MLSSGI PNNVIYT+LID
Sbjct: 541  AKILLVDMGEKGIKPSAYTYGAFINIYSKTGEIQVAERYFKNMLSSGIAPNNVIYTSLID 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            GHCNVGNTV+ALSTFKCMLEKGLIPDVQTYSALIH LSKNGKTE AMGVFSEFLNKGLVP
Sbjct: 601  GHCNVGNTVQALSTFKCMLEKGLIPDVQTYSALIHGLSKNGKTEEAMGVFSEFLNKGLVP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVFIYNSLI GFCKKGEIEKASQ+YE+M L GI PNIV YNTLINGLCKLGEV+KARE F
Sbjct: 661  DVFIYNSLIYGFCKKGEIEKASQIYEDMFLKGINPNIVIYNTLINGLCKLGEVEKAREFF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            DK++GK L PNVVTYSTIVDGYCKSGN+ EAFKLFDEMI K + PDC+IYCIL+DGC KE
Sbjct: 721  DKMEGKGLSPNVVTYSTIVDGYCKSGNITEAFKLFDEMISKAVSPDCYIYCILVDGCCKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEALQKS++S SAFNSL+DGFCKLGKV+EARELF++MVDK+V PN+VTYT
Sbjct: 781  GNLEKALSLFHEALQKSLASPSAFNSLVDGFCKLGKVVEARELFENMVDKQVTPNNVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAY K EM+EEAEQLFLDMETRNI+PNTLTYTSLLLGYNQIGNR+KMIS+FKDMEAR
Sbjct: 841  ILIDAYCKEEMMEEAEQLFLDMETRNIVPNTLTYTSLLLGYNQIGNRYKMISVFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAI YGVMA  YCKEGNSLEALKLLD+S V+GIKLDDDVFDAL FHLCKEE +S I
Sbjct: 901  GIACDAITYGVMADAYCKEGNSLEALKLLDESFVKGIKLDDDVFDALIFHLCKEENVSRI 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            L+LLDE  ++ ++LSSTTC ALLLGFY AGN ++AS+ L  MQ+LGWVPAS SL D ++A
Sbjct: 961  LKLLDEMVEKGLALSSTTCTALLLGFYKAGNVDKASEALDIMQKLGWVPASSSLVDLINA 1020

Query: 1021 GRNDMKSDNFPSIAMQIGSV 1035
            G+NDM SD+FPS AMQ+GSV
Sbjct: 1021 GKNDMISDSFPSTAMQVGSV 1040

[Close]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL
Match: A0A6J1FS28 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447652 PE=4 SV=1)

HSP 1 Score: 1703.7 bits (4411), Expect = 0.0e+00
Identity = 852/1040 (81.92%), Postives = 933/1040 (89.71%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MANA+CLIRQMAA SH  R L S P       LI N+ CT  +FFST +P DH DDTVRE
Sbjct: 1    MANAMCLIRQMAAISHPRRNLCSFPVQNTNFPLIANDVCTQFIFFSTAHPYDHNDDTVRE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
             STILK  DWQ++L+N+ SL+KLNPEIV SV+QKNEI+DPVRLQ+FFYWS+S+MGT QNL
Sbjct: 61   ISTILKLSDWQVVLDNQNSLKKLNPEIVRSVLQKNEINDPVRLQSFFYWSSSRMGTPQNL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
            HSYSILAIRLCNSGLF RADNMFEK+LETRKPPLEILDSLV+CYRECGGSNL VFDIL+D
Sbjct: 121  HSYSILAIRLCNSGLFPRADNMFEKMLETRKPPLEILDSLVKCYRECGGSNLIVFDILVD 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
            NFR+ GFLNEA SVF+ASISGGFFPSLICCNSLMRDLLK  MMGLFWKVYG MVEAKIVP
Sbjct: 181  NFRKFGFLNEACSVFLASISGGFFPSLICCNSLMRDLLKGKMMGLFWKVYGGMVEAKIVP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVINAHCKVGDV+KG+MVLSEMEEK CKPNLVTYNV+IGGLCRTG V+EALEVK
Sbjct: 241  DVYTYTNVINAHCKVGDVMKGRMVLSEMEEKGCKPNLVTYNVVIGGLCRTGDVNEALEVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            KLMMEKGLVPDG+TYS+LIDGFCKQKRSEEAKLI ESML SGLNPNH T TAL+DGFMKQ
Sbjct: 301  KLMMEKGLVPDGFTYSILIDGFCKQKRSEEAKLILESMLGSGLNPNHITYTALIDGFMKQ 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            GNI+EALRIKDEM+TRGLKLNIVTYN +IR IAKAGEM KAMAL NEMF+TGIE DT TY
Sbjct: 361  GNIEEALRIKDEMVTRGLKLNIVTYNTLIRGIAKAGEMEKAMALVNEMFITGIELDTQTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            + +IDGYLKSH+  KAYELLAEMKARNLMPS +TYSVLI+GLCRS +L KANEVL+ MI 
Sbjct: 421  DLLIDGYLKSHNKDKAYELLAEMKARNLMPSLYTYSVLINGLCRSRELPKANEVLEHMIS 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            +GVKPNAVIYATLI A VQESR+EGA E+LK M+ NGV+PDLFCYNSLIIGLCRAK+VEE
Sbjct: 481  HGVKPNAVIYATLINANVQESRYEGAKEVLKGMVKNGVVPDLFCYNSLIIGLCRAKRVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AKM+ VEMGEKGIKPNAYTYGAFI LY K+GEIQVAERYFQDMLSS IVPNN+IYTALID
Sbjct: 541  AKMMFVEMGEKGIKPNAYTYGAFIHLYCKTGEIQVAERYFQDMLSSRIVPNNIIYTALID 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            GHCNVGNTVEALSTFKCMLEKGLIPDVQTY ALIH LSKNGKTE AM VFSE+L+KGLVP
Sbjct: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYGALIHGLSKNGKTEEAMVVFSEYLDKGLVP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVFIYNSLISGFCKKGEIEKASQLYEEMLL G  PNIV YNTLINGLCKLGE+K ARELF
Sbjct: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLKGPNPNIVIYNTLINGLCKLGEIKDARELF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            DKI+GK LVPNVVTYS I+DGYCKSGNL EAF LFDEMI KG+P D HIYCILIDGC K+
Sbjct: 721  DKIEGKGLVPNVVTYSIIIDGYCKSGNLTEAFNLFDEMISKGVPLDRHIYCILIDGCCKQ 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEALQKSV+S SAFNSLIDGFCKLGK+IEARELFDD VDK V PNSVTYT
Sbjct: 781  GNLEKALSLFHEALQKSVASPSAFNSLIDGFCKLGKLIEARELFDDTVDKHVTPNSVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            IL+DAY KAEM+EEAEQLFLDM T+NI+PNTLTYTSLLLGYN+IG+R KMISLFKDMEAR
Sbjct: 841  ILVDAYSKAEMMEEAEQLFLDMGTKNIMPNTLTYTSLLLGYNRIGHRIKMISLFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAI YGVMA VYCKEGNSLEALKLLDKSLVEGIKLD DVFDAL FHLC E K ST+
Sbjct: 901  GIACDAITYGVMADVYCKEGNSLEALKLLDKSLVEGIKLDGDVFDALIFHLCNEGKNSTM 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            L+LL E  +++++L+STTC ALL+GFY AGNE++A +VL  MQRLGWVP SL++ D ++A
Sbjct: 961  LKLLGEMAEKKLALTSTTCTALLIGFYKAGNEDKALEVLDIMQRLGWVPDSLNVVDLVNA 1020

Query: 1021 GRNDMKSDNFPSIAMQIGSV 1035
             +NDM S++FPS AMQ+GSV
Sbjct: 1021 RKNDMNSESFPSDAMQVGSV 1040

[Close]

BLAST of Lsi04G007980 vs. NCBI nr
Match: XP_038892348.1 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Benincasa hispida])

HSP 1 Score: 1846.2 bits (4781), Expect = 0.0e+00
Identity = 932/1034 (90.14%), Postives = 968/1034 (93.62%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSPSLIGNNFCTHVMFFSTTNPSDHYDDTVREFSTILK 60
            MAN LCLIRQMAAN+   RIL SSPS        H MFFS  NPSDH DDTVREFSTILK
Sbjct: 1    MANVLCLIRQMAANTPPRRILCSSPS--------HFMFFSIANPSDHNDDTVREFSTILK 60

Query: 61   RKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSIL 120
            R+DW+ILLNNEESLRKLNPEIVCSV++KNEIDD VRLQNFFYWSTSKMGT QNLHSYSIL
Sbjct: 61   REDWRILLNNEESLRKLNPEIVCSVLRKNEIDDSVRLQNFFYWSTSKMGTPQNLHSYSIL 120

Query: 121  AIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLG 180
            AIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFR+LG
Sbjct: 121  AIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRKLG 180

Query: 181  FLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYT 240
            FLNEASSVFIASISGGFFPSLICCNSLMRDLLK NM GLFWKVY SMVEAKIVPDVYTYT
Sbjct: 181  FLNEASSVFIASISGGFFPSLICCNSLMRDLLKGNMTGLFWKVYESMVEAKIVPDVYTYT 240

Query: 241  NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEK 300
            NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLM EK
Sbjct: 241  NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMTEK 300

Query: 301  GLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEA 360
            GLVPDGYTYSLLIDGF KQKRSEEAKLIF+SMLSSGLNPNHFTCTAL+DGFMKQGNI+EA
Sbjct: 301  GLVPDGYTYSLLIDGFFKQKRSEEAKLIFKSMLSSGLNPNHFTCTALIDGFMKQGNIEEA 360

Query: 361  LRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDG 420
            LRIKDEMIT GLKLNIVTYNA+IR IA+AGEMGKAMALFNEMF+TGIEPD  TYNS+IDG
Sbjct: 361  LRIKDEMITHGLKLNIVTYNAVIRGIARAGEMGKAMALFNEMFLTGIEPDAETYNSLIDG 420

Query: 421  YLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPN 480
            YLKSHDVAKAYELLAEMK RNL P+SFTY VLISGLCRS+D QKANEVL+QMIRN VKPN
Sbjct: 421  YLKSHDVAKAYELLAEMKVRNLKPTSFTYGVLISGLCRSNDPQKANEVLEQMIRNRVKPN 480

Query: 481  AVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLV 540
            AVIY  LIKAYVQESR+E AIELLKRMI NGVLPDLFCYN LIIGLCRAKKVEEAKMLLV
Sbjct: 481  AVIYNALIKAYVQESRYEAAIELLKRMIENGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV 540

Query: 541  EMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVG 600
            +MGEKGIKPNAYTYGAFIS Y KSGEIQVAERYF+DMLSSGIVPNN+IYTALI+GHCNVG
Sbjct: 541  DMGEKGIKPNAYTYGAFISSYSKSGEIQVAERYFKDMLSSGIVPNNIIYTALINGHCNVG 600

Query: 601  NTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFIYN 660
            NTVEALSTFKCMLEKGLIPDV+ YSALIH LSKNGKT+ AMGVFSEFLNKGLVPDVFIYN
Sbjct: 601  NTVEALSTFKCMLEKGLIPDVRAYSALIHALSKNGKTKEAMGVFSEFLNKGLVPDVFIYN 660

Query: 661  SLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIKGK 720
            SLI GFCKKGEIE ASQLYEEMLLN I PNIV YNTLINGLCKLGEVKKARELFDKI+GK
Sbjct: 661  SLIFGFCKKGEIEMASQLYEEMLLNRINPNIVIYNTLINGLCKLGEVKKARELFDKIEGK 720

Query: 721  DLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGNLEKA 780
            DLVPNVVTYSTIVDGYCKSG+L EAFKLFDEM+ KG+ PD HIYCILIDGCGKEGNLEKA
Sbjct: 721  DLVPNVVTYSTIVDGYCKSGSLTEAFKLFDEMVSKGVSPDGHIYCILIDGCGKEGNLEKA 780

Query: 781  LSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILIDAY 840
            LSLFHEALQKSV+S SAFNSLIDGFCK GKVIEARELFDDMVDKKVIPNSV YTILIDAY
Sbjct: 781  LSLFHEALQKSVASPSAFNSLIDGFCKHGKVIEARELFDDMVDKKVIPNSVMYTILIDAY 840

Query: 841  GKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDA 900
            GKAEMIEEAEQLFLDM+TRNIIPNTLT TSLLL YN+IGNRFKMISLFKDMEARGIACDA
Sbjct: 841  GKAEMIEEAEQLFLDMQTRNIIPNTLTCTSLLLSYNRIGNRFKMISLFKDMEARGIACDA 900

Query: 901  IAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTILELLDE 960
            IAYGVMAS YCKEGNSLEALKLLDKSLVEGIKLD+DV DAL FHLCKEEKISTILELLDE
Sbjct: 901  IAYGVMASTYCKEGNSLEALKLLDKSLVEGIKLDNDVLDALIFHLCKEEKISTILELLDE 960

Query: 961  RGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSAGRNDMK 1020
             GKEE+SLS TTCNALLLGFYNAGNE++ASKVLG MQRLGWVPASLSLTD +SAGRND  
Sbjct: 961  MGKEELSLSCTTCNALLLGFYNAGNEDDASKVLGIMQRLGWVPASLSLTDLISAGRNDTI 1020

Query: 1021 SDNFPSIAMQIGSV 1035
            SDNFPSIAMQ+GSV
Sbjct: 1021 SDNFPSIAMQVGSV 1026

[Close]

BLAST of Lsi04G007980 vs. NCBI nr
Match: XP_008445872.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis melo] >XP_008445873.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis melo] >XP_008445874.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis melo] >XP_008445875.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis melo])

HSP 1 Score: 1758.8 bits (4554), Expect = 0.0e+00
Identity = 883/1028 (85.89%), Postives = 941/1028 (91.54%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MANALCLIRQMA NS    ILS+ P        I NNF   +MFFST NPSDHY+DTVRE
Sbjct: 1    MANALCLIRQMAVNSSPRGILSTFPLRTTSFPQIWNNFSIRLMFFSTNNPSDHYEDTVRE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
            FS ILKRKDW ILLNNE+SLRKLNPE+VCSV+QK+EIDD VRLQNFFYWS+SKM T QNL
Sbjct: 61   FSMILKRKDWVILLNNEDSLRKLNPEVVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQNL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
             SYSILAIRLCNSGL  +A NM EKLLETRKPPLEILDSLVRCYRE GGSNLTVFDI ID
Sbjct: 121  LSYSILAIRLCNSGLIHQAQNMLEKLLETRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
            NFR  GFLNEASSVFIASIS GFFPSL+CCN+LMRDLLK NMMGLFWKVYGSM+EAKIVP
Sbjct: 181  NFRMFGFLNEASSVFIASISEGFFPSLMCCNNLMRDLLKGNMMGLFWKVYGSMLEAKIVP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVINAHCKVGDVIKGKMVLSEME+KECKPNL+TYNV+IGGLCRTGA+DEALEVK
Sbjct: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEKKECKPNLITYNVVIGGLCRTGALDEALEVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            KLMMEKGL PDGYTY+LLIDGFCKQKRS+EAKLIFESMLSSG NPNHFTC+AL+DGFMK+
Sbjct: 301  KLMMEKGLGPDGYTYTLLIDGFCKQKRSKEAKLIFESMLSSGSNPNHFTCSALIDGFMKE 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            G I+EAL IKDEMITRGLKLN+VTYNAMI  IAKAGEMGKAMALFNEM M GIEPDTWTY
Sbjct: 361  GTIEEALSIKDEMITRGLKLNVVTYNAMIGGIAKAGEMGKAMALFNEMLMAGIEPDTWTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            N++IDGYLKSHD+AKA ELLAEMKARNLM S FT SVLISGLC   DLQKANEVL QMIR
Sbjct: 421  NTLIDGYLKSHDMAKACELLAEMKARNLMLSPFTCSVLISGLCHCGDLQKANEVLDQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            +GVKP+  +Y TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEE
Sbjct: 481  SGVKPSVFMYGTLIKAYVQESRYETAIELLKVMIANGVLPDLFCYNCLIIGLCRAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AKMLLV+MGEKGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI+
Sbjct: 541  AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIN 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            G+C+VGNTVEALSTFKCM EKGLIPDV+ YSA+IH LSKNGKT+ AMGVF EFL KGL P
Sbjct: 601  GYCDVGNTVEALSTFKCMFEKGLIPDVRAYSAIIHSLSKNGKTKEAMGVFLEFLKKGLAP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVF+YNSLISGFCK+G+IEKASQLYEEML NGI PNIV YNTLINGLCKLGEVKKARELF
Sbjct: 661  DVFLYNSLISGFCKEGDIEKASQLYEEMLHNGINPNIVVYNTLINGLCKLGEVKKARELF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            DKI+GKDLVPNVVTYSTIVDGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKE
Sbjct: 721  DKIEGKDLVPNVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEALQKSV+S SAFNSLID FCK GKVIEARELFDDMVDKKV PNSVTYT
Sbjct: 781  GNLEKALSLFHEALQKSVASLSAFNSLIDSFCKHGKVIEARELFDDMVDKKVTPNSVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAYG+AEM+EEAEQLFLDME RNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR
Sbjct: 841  ILIDAYGRAEMMEEAEQLFLDMEMRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAIAYGVMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+
Sbjct: 901  GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            LELL E GKEE+SLSS TCNALLLGF+N+GNE+EASKVLG MQRLGWVP SLSLTDS+S 
Sbjct: 961  LELLTEMGKEELSLSSKTCNALLLGFFNSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1020

Query: 1021 GRNDMKSD 1023
            GRNDMKSD
Sbjct: 1021 GRNDMKSD 1028

[Close]

BLAST of Lsi04G007980 vs. NCBI nr
Match: KAA0034065.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1739.5 bits (4504), Expect = 0.0e+00
Identity = 873/1018 (85.76%), Postives = 930/1018 (91.36%), Query Frame = 0


Query: 11   MAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVREFSTILKRKDW 70
            MA NS    ILS+ P        I NNF   +MFFST NPSDHY+DTVREFS ILKRKDW
Sbjct: 1    MAVNSSPRGILSTFPLRTTNFPQIWNNFSIRLMFFSTNNPSDHYEDTVREFSMILKRKDW 60

Query: 71   QILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSILAIRL 130
             ILLNNE+SLRKLNPE+VCSV+QK+EIDD VRLQNFFYWS+SKM T QNL SYSILAIRL
Sbjct: 61   VILLNNEDSLRKLNPEVVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQNLLSYSILAIRL 120

Query: 131  CNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLGFLNE 190
            CNSGL  +A NM EKLLETRKPPLEILDSLVRCYRE GGSNLTVFDI IDNFR  GFLNE
Sbjct: 121  CNSGLIHQAQNMLEKLLETRKPPLEILDSLVRCYREFGGSNLTVFDIFIDNFRMFGFLNE 180

Query: 191  ASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTNVIN 250
            ASSVFIASIS GFFPSL+CCN+LMRDLLK NMMGLFWKVYGSM+EAKIVPDVYTYTNVIN
Sbjct: 181  ASSVFIASISEGFFPSLMCCNNLMRDLLKGNMMGLFWKVYGSMLEAKIVPDVYTYTNVIN 240

Query: 251  AHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEKGLVP 310
            AHCKVGDVIKGKMVLSEME+KECKPNL+TYNV+IGGLCRTGAVDEALEVKKLMMEKGL P
Sbjct: 241  AHCKVGDVIKGKMVLSEMEKKECKPNLITYNVVIGGLCRTGAVDEALEVKKLMMEKGLGP 300

Query: 311  DGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEALRIK 370
            DGYTY+LLIDGFCKQKRS+EAKLIFESMLSSG NPNHFTC+AL+DGFMK+G I+EAL IK
Sbjct: 301  DGYTYTLLIDGFCKQKRSKEAKLIFESMLSSGSNPNHFTCSALIDGFMKEGTIEEALSIK 360

Query: 371  DEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDGYLKS 430
            +EMITRGLKLN+VTYNAMI  IAKAGEMGKAMALFNEM M GIEPDTWTYN++IDGYLKS
Sbjct: 361  NEMITRGLKLNVVTYNAMIGGIAKAGEMGKAMALFNEMLMAGIEPDTWTYNTLIDGYLKS 420

Query: 431  HDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPNAVIY 490
            HD AKA ELLAEMKARNLM S FT SVLISGLC   DLQKANEVL QMIR+GVKP+  +Y
Sbjct: 421  HDTAKACELLAEMKARNLMLSPFTCSVLISGLCHCGDLQKANEVLDQMIRSGVKPSVFMY 480

Query: 491  ATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVEMGE 550
             TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEEAKMLLV+MGE
Sbjct: 481  GTLIKAYVQESRYETAIELLKVMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 540

Query: 551  KGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVGNTVE 610
            KGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI+G+C+VGNTVE
Sbjct: 541  KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILINGYCDVGNTVE 600

Query: 611  ALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNSLIS 670
            ALSTFKCM EKGLIPDV+ YSA+IH LSKNGKT+ AMGVF EFL KGL PDVF+YNSLIS
Sbjct: 601  ALSTFKCMFEKGLIPDVRAYSAIIHSLSKNGKTKEAMGVFLEFLKKGLAPDVFLYNSLIS 660

Query: 671  GFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIKGKDLVP 730
            GFCK+G+IEKASQLYEEML NGI PNIV YNTLINGLCKLGEVKKARELFDKI+GKDLVP
Sbjct: 661  GFCKEGDIEKASQLYEEMLHNGINPNIVVYNTLINGLCKLGEVKKARELFDKIEGKDLVP 720

Query: 731  NVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGNLEKALSLF 790
            NVVTYSTIVDGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKEGNLEKALSLF
Sbjct: 721  NVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 780

Query: 791  HEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILIDAYGKAE 850
            HEALQKSV+S SAFNSLID FCK GKVIEARELFDDMVDKKV PNSVTYTILIDAYG+AE
Sbjct: 781  HEALQKSVASLSAFNSLIDSFCKHGKVIEARELFDDMVDKKVTPNSVTYTILIDAYGRAE 840

Query: 851  MIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG 910
            M+EEAEQLFLDME RNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG
Sbjct: 841  MMEEAEQLFLDMEMRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYG 900

Query: 911  VMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTILELLDERGKE 970
            VMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+LELL E GKE
Sbjct: 901  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLTEMGKE 960

Query: 971  EISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSAGRNDMKSD 1023
            E+SLSS TCNALLLGF+N+GNE+EASKVLG MQRLGWVP SLSLTDS+S GRNDMKSD
Sbjct: 961  ELSLSSKTCNALLLGFFNSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRNDMKSD 1018

[Close]

BLAST of Lsi04G007980 vs. NCBI nr
Match: XP_031741907.1 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis sativus] >KGN50452.1 hypothetical protein Csa_000505 [Cucumis sativus])

HSP 1 Score: 1729.9 bits (4479), Expect = 0.0e+00
Identity = 871/1028 (84.73%), Postives = 932/1028 (90.66%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MANALCLIRQ+AANS   RILS+ P        I NN   H MFFST NP DHYDDTVRE
Sbjct: 1    MANALCLIRQIAANSSPRRILSTFPFQTTSFPQIWNNVSIHFMFFSTNNPFDHYDDTVRE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
            FS ILKRKDWQILLNNE+++RKLNPEIVCSV+QK+EIDD VRLQNFFYWS+SKM T Q L
Sbjct: 61   FSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
            HSYSILAIRLCNSGL  +ADNM EKLL+TRKPPLEILDSLVRCYRE GGSNLTVFDI ID
Sbjct: 121  HSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
             FR LGFLNEASSVFIASIS GFFP+LICCN+LMRDLLK+NMMGLFWKVYGSMVEAKIVP
Sbjct: 181  KFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVI AHCKVGDVIKGKMVLSEM EKECKPNL TYN  IGGLC+TGAVDEALEVK
Sbjct: 241  DVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            KLMMEKGL PDG+TY+LL+DGFCKQKRS+EAKLIFESM SSGLNPN FT TAL+DGF+K+
Sbjct: 301  KLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKE 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            GNI+EALRIKDEMITRGLKLN+VTYNAMI  IAKAGEM KAM+LFNEM M G+EPDTWTY
Sbjct: 361  GNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            N +IDGYLKSHD+AKA ELLAEMKAR L PS FTYSVLISGLC SSDLQKANEVL QMIR
Sbjct: 421  NLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            NGVKPN  +Y TLIKAYVQESR+E AIELLK MIANGVLPDLFCYN LIIGLCRAKKVEE
Sbjct: 481  NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AKMLLV+MGEKGIKPNA+TYGAFI+LY KSGEIQVAERYF+DMLSSGIVPNNVIYT LI 
Sbjct: 541  AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            GHC+VGNTVEALSTFKCMLEKGLIPD++ YSA+IH LSKNGKT+ AMGVF +FL  G+VP
Sbjct: 601  GHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVF+YNSLISGFCK+G+IEKASQLY+EML NGI PNIV YNTLINGLCKLGEV KARELF
Sbjct: 661  DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            D+I+ KDLVP+VVTYSTI+DGYCKSGNL EAFKLFDEMI KGI PD +IYCILIDGCGKE
Sbjct: 721  DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEA QKSV S SAFNSLID FCK GKVIEARELFDDMVDKK+ PN VTYT
Sbjct: 781  GNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAYGKAEM+EEAEQLFLDMETRNIIPNTLTYTSLLL YNQIGNRFKMISLFKDMEAR
Sbjct: 841  ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAIAYGVMAS YCKEG SLEALKLL+KSLVEGIKL+DDVFDAL FHLCKE++IST+
Sbjct: 901  GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            LELL E GKEE+SLSS TCN LLLGFY +GNE+EASKVLG MQRLGWVP SLSLTDS+S 
Sbjct: 961  LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIST 1020

Query: 1021 GRNDMKSD 1023
            GR+DMKSD
Sbjct: 1021 GRDDMKSD 1027

[Close]

BLAST of Lsi04G007980 vs. NCBI nr
Match: XP_022139073.1 (pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Momordica charantia])

HSP 1 Score: 1718.4 bits (4449), Expect = 0.0e+00
Identity = 848/1040 (81.54%), Postives = 941/1040 (90.48%), Query Frame = 0


Query: 1    MANALCLIRQMAANSHLCRILSSSP------SLIGNNFCTHVMFFSTTNPSDHYDDTVRE 60
            MAN++CLIRQMA NSH  R L S P        I N+ C H MFFSTTN  D  D+TV E
Sbjct: 1    MANSMCLIRQMAVNSHPRRKLCSFPLQNTNFPQIANDVCIHFMFFSTTNTPDRNDETVHE 60

Query: 61   FSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNL 120
             STILKR DWQILLN++++LRKLNPEIV SV+ KNEI DPVRLQ+FFYWS+SKMGT QNL
Sbjct: 61   ISTILKRSDWQILLNSQDNLRKLNPEIVRSVLHKNEIGDPVRLQSFFYWSSSKMGTPQNL 120

Query: 121  HSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILID 180
            HSYSILAI LC+SGLF RADN+FEK+LETRKPPLEIL+SLV+C RECGGSNL VFDILID
Sbjct: 121  HSYSILAIHLCSSGLFPRADNLFEKMLETRKPPLEILESLVKCCRECGGSNLIVFDILID 180

Query: 181  NFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVP 240
            NFR+LGFL EASSVF+ASI+GGF PSLICCN LMRDLLK N+MGLFWKVYG MVEAKI P
Sbjct: 181  NFRKLGFLKEASSVFLASINGGFLPSLICCNGLMRDLLKGNLMGLFWKVYGGMVEAKIAP 240

Query: 241  DVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVK 300
            DVYTYTNVINA+CKVGDV+KG+MVLSEMEEK CKPN VTYNVIIGGLCRTGAVDEAL VK
Sbjct: 241  DVYTYTNVINAYCKVGDVVKGRMVLSEMEEKGCKPNSVTYNVIIGGLCRTGAVDEALAVK 300

Query: 301  KLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQ 360
            + MMEKGLVPDGYTYS+LIDGFCKQKRSEEAKLI ES+L SGLNPNHFT TAL+DGFMKQ
Sbjct: 301  RSMMEKGLVPDGYTYSILIDGFCKQKRSEEAKLILESVLYSGLNPNHFTYTALIDGFMKQ 360

Query: 361  GNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTY 420
            GNI+EALRIKDEMI+RGLKLN+VTYNA+IR I+KAGEM KAMALFNEM MT +EPDT TY
Sbjct: 361  GNIEEALRIKDEMISRGLKLNVVTYNAIIRGISKAGEMEKAMALFNEMLMTSVEPDTRTY 420

Query: 421  NSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIR 480
            +S+IDGYLKSHD+AKAYELLAEMKARNLMPS FTYSVLI+G CRS DLQKAN+VL+QMIR
Sbjct: 421  DSLIDGYLKSHDMAKAYELLAEMKARNLMPSLFTYSVLINGFCRSGDLQKANKVLEQMIR 480

Query: 481  NGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEE 540
            NG+KPNAVIYATLIKAYVQE R+EGAIE+L+ M ANGVLPD+FCYNSLIIGLC+AKKVEE
Sbjct: 481  NGLKPNAVIYATLIKAYVQEGRYEGAIEVLRGMTANGVLPDVFCYNSLIIGLCKAKKVEE 540

Query: 541  AKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALID 600
            AK+LLV+MGEKGIKP+AYTYGAFI++Y K+GEIQVAERYF++MLSSGI PNNVIYT+LID
Sbjct: 541  AKILLVDMGEKGIKPSAYTYGAFINIYSKTGEIQVAERYFKNMLSSGIAPNNVIYTSLID 600

Query: 601  GHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVP 660
            GHCNVGNTV+ALSTFKCMLEKGLIPDVQTYSALIH LSKNGKTE AMGVFSEFLNKGLVP
Sbjct: 601  GHCNVGNTVQALSTFKCMLEKGLIPDVQTYSALIHGLSKNGKTEEAMGVFSEFLNKGLVP 660

Query: 661  DVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELF 720
            DVFIYNSLI GFCKKGEIEKASQ+YE+M L GI PNIV YNTLINGLCKLGEV+KARE F
Sbjct: 661  DVFIYNSLIYGFCKKGEIEKASQIYEDMFLKGINPNIVIYNTLINGLCKLGEVEKAREFF 720

Query: 721  DKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKE 780
            DK++GK L PNVVTYSTIVDGYCKSGN+ EAFKLFDEMI K + PDC+IYCIL+DGC KE
Sbjct: 721  DKMEGKGLSPNVVTYSTIVDGYCKSGNITEAFKLFDEMISKAVSPDCYIYCILVDGCCKE 780

Query: 781  GNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYT 840
            GNLEKALSLFHEALQKS++S SAFNSL+DGFCKLGKV+EARELF++MVDK+V PN+VTYT
Sbjct: 781  GNLEKALSLFHEALQKSLASPSAFNSLVDGFCKLGKVVEARELFENMVDKQVTPNNVTYT 840

Query: 841  ILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEAR 900
            ILIDAY K EM+EEAEQLFLDMETRNI+PNTLTYTSLLLGYNQIGNR+KMIS+FKDMEAR
Sbjct: 841  ILIDAYCKEEMMEEAEQLFLDMETRNIVPNTLTYTSLLLGYNQIGNRYKMISVFKDMEAR 900

Query: 901  GIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVEGIKLDDDVFDALTFHLCKEEKISTI 960
            GIACDAI YGVMA  YCKEGNSLEALKLLD+S V+GIKLDDDVFDAL FHLCKEE +S I
Sbjct: 901  GIACDAITYGVMADAYCKEGNSLEALKLLDESFVKGIKLDDDVFDALIFHLCKEENVSRI 960

Query: 961  LELLDERGKEEISLSSTTCNALLLGFYNAGNEEEASKVLGTMQRLGWVPASLSLTDSLSA 1020
            L+LLDE  ++ ++LSSTTC ALLLGFY AGN ++AS+ L  MQ+LGWVPAS SL D ++A
Sbjct: 961  LKLLDEMVEKGLALSSTTCTALLLGFYKAGNVDKASEALDIMQKLGWVPASSSLVDLINA 1020

Query: 1021 GRNDMKSDNFPSIAMQIGSV 1035
            G+NDM SD+FPS AMQ+GSV
Sbjct: 1021 GKNDMISDSFPSTAMQVGSV 1040

[Close]

BLAST of Lsi04G007980 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 735.3 bits (1897), Expect = 6.6e-212
Identity = 398/984 (40.45%), Postives = 594/984 (60.37%), Query Frame = 0


Query: 36   VMFFSTTNPSDHYDDTVREFSTILKRKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPV 95
            ++F S +   +   D   E + ILK+++W+  L +     ++NPE+V SV++   +DDP 
Sbjct: 19   LLFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPS 78

Query: 96   RLQNFFYWSTSKMGTSQNLHSYSILAIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLV 155
            +L +FF W  S+  T Q L S+S LA+ LCN G F +A ++ E+++E   P  E+  S+V
Sbjct: 79   KLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV 138

Query: 156  RCYRECGG--SNLTVFDILIDNFRQLGFLNEASSVFIASISGGFFPSLICCNSLMRDLLK 215
            RC +E  G   +  +F IL D +   G++ EA  VF +S+     P L  C  L+  LL+
Sbjct: 139  RCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLR 198

Query: 216  SNMMGLFWKVYGSMVEAKIVPDVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVT 275
             N + LFW VY  MVE  +V DV TY  +I AHC+ G+V  GK VL + E++       T
Sbjct: 199  WNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTAT 258

Query: 276  YNVIIGGLCRTGAVDEALEVKKLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESML 335
             N           VD AL++K+ M+ KGLVP  YTY +LIDG CK KR E+AK +   M 
Sbjct: 259  LN-----------VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 318

Query: 336  SSGLNPNHFTCTALVDGFMKQGNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMG 395
            S G++ ++ T + L+DG +K  N D A  +  EM++ G+ +    Y+  I  ++K G M 
Sbjct: 319  SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 378

Query: 396  KAMALFNEMFMTGIEPDTWTYNSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLI 455
            KA ALF+ M  +G+ P    Y S+I+GY +  +V + YELL EMK RN++ S +TY  ++
Sbjct: 379  KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 438

Query: 456  SGLCRSSDLQKANEVLQQMIRNGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIANGVL 515
             G+C S DL  A  ++++MI +G +PN VIY TLIK ++Q SRF  A+ +LK M   G+ 
Sbjct: 439  KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 498

Query: 516  PDLFCYNSLIIGLCRAKKVEEAKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERY 575
            PD+FCYNSLIIGL +AK+++EA+  LVEM E G+KPNA+TYGAFIS Y ++ E   A++Y
Sbjct: 499  PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 558

Query: 576  FQDMLSSGIVPNNVIYTALIDGHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIHVLSK 635
             ++M   G++PN V+ T LI+ +C  G  +EA S ++ M+++G++ D +TY+ L++ L K
Sbjct: 559  VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 618

Query: 636  NGKTEGAMGVFSEFLNKGLVPDVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVT 695
            N K + A  +F E   KG+ PDVF Y  LI+GF K G ++KAS +++EM+  G+ PN++ 
Sbjct: 619  NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 678

Query: 696  YNTLINGLCKLGEVKKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMI 755
            YN L+ G C+ GE++KA+EL D++  K L PN VTY TI+DGYCKSG+L EAF+LFDEM 
Sbjct: 679  YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 738

Query: 756  LKGIPPDCHIYCILIDGCGKEGNLEKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIE 815
            LKG+ PD  +Y  L+DGC +  ++E+A+++F    +   SS++ FN+LI+   K GK   
Sbjct: 739  LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 798

Query: 816  ARE----LFDDMVDKKVIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYT 875
              E    L D   D+   PN VTY I+ID   K   +E A++LF  M+  N++P  +TYT
Sbjct: 799  KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 858

Query: 876  SLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDKSLVE 935
            SLL GY+++G R +M  +F +  A GI  D I Y V+ + + KEG + +AL L+D+   +
Sbjct: 859  SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 918

Query: 936  GIKLDDDVFDALTFHLCKEEKISTILELLDERGKEEISLSSTTCNALLLGFYNAGNEEEA 995
               +DD          CK                    LS +TC ALL GF   G  E A
Sbjct: 919  N-AVDDG---------CK--------------------LSISTCRALLSGFAKVGEMEVA 958

Query: 996  SKVLGTMQRLGWVPASLSLTDSLS 1014
             KV+  M RL ++P S ++ + ++
Sbjct: 979  EKVMENMVRLQYIPDSATVIELIN 958

[Close]

BLAST of Lsi04G007980 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 422.9 bits (1086), Expect = 7.2e-118
Identity = 258/839 (30.75%), Postives = 432/839 (51.49%), Query Frame = 0


Query: 61  RKDWQILLNNEESLRKLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSIL 120
           ++ W+I L++E   R+L    V  ++    IDDP     FF +     G   +  S+ IL
Sbjct: 52  KRSWEIALSSELVSRRLKTVHVEEIL-IGTIDDPKLGLRFFNFLGLHRGFDHSTASFCIL 111

Query: 121 AIRLCNSGLFLRADNMFEKLLETRKPPLEILDSLVRCYRECGGSNLTVFDILIDNFRQLG 180
              L  + LF  A ++ + LL     P ++ + L  CY +C  S+ + FD+LI ++ +  
Sbjct: 112 IHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSR 171

Query: 181 FLNEASSVFIASISG-GFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTY 240
            + +   VF   I+     P +   ++L+  L+K    GL  +++  MV   I PDVY Y
Sbjct: 172 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 231

Query: 241 TNVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMME 300
           T VI + C++ D+ + K +++ ME   C  N+V YNV+I GLC+   V EA+ +KK +  
Sbjct: 232 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 291

Query: 301 KGLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDE 360
           K L PD  TY  L+ G CK +  E    + + ML    +P+    ++LV+G  K+G I+E
Sbjct: 292 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 351

Query: 361 ALRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMID 420
           AL +   ++  G+  N+  YNA+I S+ K  +  +A  LF+ M   G+ P+  TY+ +ID
Sbjct: 352 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 411

Query: 421 GYLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKP 480
            + +   +  A   L EM    L  S + Y+ LI+G C+  D+  A   + +MI   ++P
Sbjct: 412 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 471

Query: 481 NAVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLL 540
             V Y +L+  Y  + +   A+ L   M   G+ P ++ + +L+ GL RA  + +A  L 
Sbjct: 472 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 531

Query: 541 VEMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNV 600
            EM E  +KPN  TY   I  Y + G++  A  + ++M   GIVP+   Y  LI G C  
Sbjct: 532 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 591

Query: 601 GNTVEALSTFKCMLEKGLIP-DVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFI 660
           G   EA   F   L KG    +   Y+ L+H   + GK E A+ V  E + +G+  D+  
Sbjct: 592 GQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 651

Query: 661 YNSLISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIK 720
           Y  LI G  K  + +    L +EM   G+ P+ V Y ++I+   K G+ K+A  ++D + 
Sbjct: 652 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 711

Query: 721 GKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGK-EGNL 780
            +  VPN VTY+ +++G CK+G + EA  L  +M      P+   Y   +D   K E ++
Sbjct: 712 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 771

Query: 781 EKALSLFHEALQKSVSSSSAFNSLIDGFCKLGKVIEARELFDDMVDKKVIPNSVTYTILI 840
           +KA+ L +  L+  +++++ +N LI GFC+ G++ EA EL   M+   V P+ +TYT +I
Sbjct: 772 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 831

Query: 841 DAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMISLFKDMEARGI 897
           +   +   +++A +L+  M  + I P+ + Y +L+ G    G   K   L  +M  +G+
Sbjct: 832 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888

[Close]

BLAST of Lsi04G007980 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-105
Identity = 231/843 (27.40%), Postives = 394/843 (46.74%), Query Frame = 0


Query: 150 ILDSLVRCYRECGGSNLTVFDILIDNFRQLGFLNEASSVFIASISGGFFPSLICCNSLMR 209
           +  +L+  YR C  SN +V+DILI  + + G + ++  +F      GF PS+  CN+++ 
Sbjct: 148 VFGALMTTYRLC-NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 207

Query: 210 DLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTNVINAHCKVGDVIKGKMVLSEMEEKECKP 269
            ++KS      W     M++ KI PDV T+  +IN  C  G   K   ++ +ME+    P
Sbjct: 208 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 267

Query: 270 NLVTYNVIIGGLCRTGAVDEALEVKKLMMEKGLVPDGYTYSLLIDGFCKQKRSEEAKLIF 329
            +VTYN ++   C+ G    A+E+   M  KG+  D  TY++LI   C+  R  +  L+ 
Sbjct: 268 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 327

Query: 330 ESMLSSGLNPNHFTCTALVDGFMKQGNIDEALRIKDEMITRGLKLNIVTYNAMIRSIAKA 389
             M    ++PN                                    VTYN +I   +  
Sbjct: 328 RDMRKRMIHPNE-----------------------------------VTYNTLINGFSNE 387

Query: 390 GEMGKAMALFNEMFMTGIEPDTWTYNSMIDGYLKSHDVAKAYELLAEMKARNLMPSSFTY 449
           G++  A  L NEM   G+ P+  T+N++IDG++   +  +A ++   M+A+ L PS  +Y
Sbjct: 388 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 447

Query: 450 SVLISGLCRSSDLQKANEVLQQMIRNGVKPNAVIYATLIKAYVQESRFEGAIELLKRMIA 509
            VL+ GLC++++   A     +M RNGV    + Y  +I    +    + A+ LL  M  
Sbjct: 448 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 507

Query: 510 NGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVEMGEKGIKPNAYTYGAFISLYGKSGEIQV 569
           +G+ PD+  Y++LI G C+  + + AK ++  +   G+ PN   Y   I    + G ++ 
Sbjct: 508 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 567

Query: 570 AERYFQDMLSSGIVPNNVIYTALIDGHCNVGNTVEALSTFKCMLEKGLIPDVQTYSALIH 629
           A R ++ M+  G   ++  +  L+   C  G   EA    +CM   G++P+  ++  LI+
Sbjct: 568 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 627

Query: 630 VLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNSLISGFCKKGEIEKASQLYEEMLLNGIIP 689
               +G+   A  VF E    G  P  F Y SL+ G CK G + +A +  + +       
Sbjct: 628 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 687

Query: 690 NIVTYNTLINGLCKLGEVKKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLF 749
           + V YNTL+  +CK G + KA  LF ++  + ++P+  TY++++ G C+ G  + A    
Sbjct: 688 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 747

Query: 750 DEMILKG-IPPDCHIYCILIDGCGKEGNLEKALSLFHEALQK--SVSSSSAFNSLIDGFC 809
            E   +G + P+  +Y   +DG  K G   KA   F E +            N++IDG+ 
Sbjct: 748 KEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYS 807

Query: 810 KLGKVIEARELFDDMVDKKVIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTL 869
           ++GK+ +  +L  +M ++   PN  TY IL+  Y K + +  +  L+  +    I+P+ L
Sbjct: 808 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKL 867

Query: 870 TYTSLLLGYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDKS 929
           T  SL+LG  +       + + K    RG+  D   + ++ S  C  G    A  L+   
Sbjct: 868 TCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 927

Query: 930 LVEGIKLDDDVFDALTFHLCKEEKISTILELLDERGKEEISLSSTTCNALLLGFYNAGNE 989
              GI LD D  DA+   L +  +      +L E  K+ IS  S     L+ G    G+ 
Sbjct: 928 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 953

[Close]

BLAST of Lsi04G007980 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 374.0 bits (959), Expect = 3.9e-103
Identity = 258/899 (28.70%), Postives = 419/899 (46.61%), Query Frame = 0


Query: 181  FLNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYT 240
            F  EA  V+   I  GF PSL   +SLM  L K   +     +   M    + P+VYT+T
Sbjct: 203  FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262

Query: 241  NVINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEK 300
              I    + G + +   +L  M+++ C P++VTY V+I  LC    +D A EV + M   
Sbjct: 263  ICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322

Query: 301  GLVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEA 360
               PD  TY  L+D F   +  +  K  +  M   G  P+  T T LVD   K GN  EA
Sbjct: 323  RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382

Query: 361  LRIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDG 420
                D M  +G+  N+ TYN +I  + +   +  A+ LF  M   G++P  +TY   ID 
Sbjct: 383  FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442

Query: 421  YLKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPN 480
            Y KS D   A E   +MK + + P+    +  +  L ++   ++A ++   +   G+ P+
Sbjct: 443  YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 481  AVIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLV 540
            +V Y  ++K Y +    + AI+LL  M+ NG  PD+   NSLI  L +A +V+EA  + +
Sbjct: 503  SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 541  EMGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVG 600
             M E  +KP   TY   ++  GK+G+IQ A   F+ M+  G  PN + +  L D  C   
Sbjct: 563  RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622

Query: 601  NTVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDV---- 660
                AL     M++ G +PDV TY+ +I  L KNG+ + AM  F + + K + PD     
Sbjct: 623  EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLC 682

Query: 661  ---------------------FIYNS--------------------------------LI 720
                                 F+YN                                 + 
Sbjct: 683  TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 742

Query: 721  SGFCKKGE---------------IEKASQLYEEMLLN-GIIPNIVTYNTLINGLCKLGEV 780
            +G C+ G+               +  A  L+E+   + G+ P + TYN LI GL +   +
Sbjct: 743  NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 802

Query: 781  KKARELFDKIKGKDLVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCIL 840
            + A+++F ++K    +P+V TY+ ++D Y KSG + E F+L+ EM       +   + I+
Sbjct: 803  EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 862

Query: 841  IDGCGKEGNLEKALSLFHEALQKSVSSSSA--FNSLIDGFCKLGKVIEARELFDDMVDKK 900
            I G  K GN++ AL L+++ +     S +A  +  LIDG  K G++ EA++LF+ M+D  
Sbjct: 863  ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 922

Query: 901  VIPNSVTYTILIDAYGKAEMIEEAEQLFLDMETRNIIPNTLTYTSLLLGYNQIGNRFKMI 960
              PN   Y ILI+ +GKA   + A  LF  M    + P+  TY+ L+     +G   + +
Sbjct: 923  CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 982

Query: 961  SLFKDMEARGIACDAIAYGVMASVYCKEGNSLEALKLLDK-SLVEGIKLDDDVFDALTFH 1004
              FK+++  G+  D + Y ++ +   K     EAL L ++     GI  D   +++L  +
Sbjct: 983  HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1042

[Close]

BLAST of Lsi04G007980 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-100
Identity = 227/747 (30.39%), Postives = 368/747 (49.26%), Query Frame = 0


Query: 76  KLNPEIVCSVVQKNEIDDPVRLQNFFYWSTSKMGTSQNLHSYSILAIRLCNSGLFLRADN 135
           +L PE    V  K  +D       FF  ++     S +L SY +L   L ++ L   A  
Sbjct: 95  RLFPEFRSKVNPKTALD-------FFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARV 154

Query: 136 MFEKLLETRKPPL------------EILDSLVRCYRECGGSNLT--VFDILIDNFRQLGF 195
           +  +L+    P L            + + SL  C+ E     ++  + ++    F++ G 
Sbjct: 155 VLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDG- 214

Query: 196 LNEASSVFIASISGGFFPSLICCNSLMRDLLKSNMMGLFWKVYGSMVEAKIVPDVYTYTN 255
              A  VF    + G FPS   CN L+  L+++N      + +  +V   + PDVY +T 
Sbjct: 215 CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTT 274

Query: 256 VINAHCKVGDVIKGKMVLSEMEEKECKPNLVTYNVIIGGLCRTGAVDEALEVKKLMMEKG 315
            INA CK G V +   + S+MEE    PN+VT+N +I GL   G  DEA   K+ M+E+G
Sbjct: 275 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 334

Query: 316 LVPDGYTYSLLIDGFCKQKRSEEAKLIFESMLSSGLNPNHFTCTALVDGFMKQGNIDEAL 375
           + P   TYS+L+ G  + KR  +A  + + M   G  PN      L+D F++ G++++A+
Sbjct: 335 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 394

Query: 376 RIKDEMITRGLKLNIVTYNAMIRSIAKAGEMGKAMALFNEMFMTGIEPDTWTYNSMIDGY 435
            IKD M+++GL L   TYN +I+   K G+   A  L  EM   G   +  ++ S+I   
Sbjct: 395 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 454

Query: 436 LKSHDVAKAYELLAEMKARNLMPSSFTYSVLISGLCRSSDLQKANEVLQQMIRNGVKPNA 495
                   A   + EM  RN+ P     + LISGLC+     KA E+  Q +  G   + 
Sbjct: 455 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 514

Query: 496 VIYATLIKAYVQESRFEGAIELLKRMIANGVLPDLFCYNSLIIGLCRAKKVEEAKMLLVE 555
                L+    +  + + A  + K ++  G + D   YN+LI G C  KK++EA M L E
Sbjct: 515 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 574

Query: 556 MGEKGIKPNAYTYGAFISLYGKSGEIQVAERYFQDMLSSGIVPNNVIYTALIDGHCNVGN 615
           M ++G+KP+ YTY   I       +++ A +++ D   +G++P+   Y+ +IDG C    
Sbjct: 575 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 634

Query: 616 TVEALSTFKCMLEKGLIPDVQTYSALIHVLSKNGKTEGAMGVFSEFLNKGLVPDVFIYNS 675
           T E    F  M+ K + P+   Y+ LI    ++G+   A+ +  +  +KG+ P+   Y S
Sbjct: 635 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 694

Query: 676 LISGFCKKGEIEKASQLYEEMLLNGIIPNIVTYNTLINGLCKLGEVKKARELFDKIKGKD 735
           LI G      +E+A  L+EEM + G+ PN+  Y  LI+G  KLG++ K   L  ++  K+
Sbjct: 695 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 754

Query: 736 LVPNVVTYSTIVDGYCKSGNLIEAFKLFDEMILKGIPPDCHIYCILIDGCGKEGNLEKAL 795
           + PN +TY+ ++ GY + GN+ EA +L +EM  KGI PD   Y   I G  K+G + +A 
Sbjct: 755 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 814

Query: 796 SLFHEALQKSVSSSSAFNSLIDGFCKL 809
                      S    + ++I+G+ KL
Sbjct: 815 ---------KGSDEENYAAIIEGWNKL 823

The following BLAST results are available for this feature:

BLAST of Lsi04G007980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIT7	9.3e-211	40.45	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]
Q9FJE6	1.0e-116	30.75	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
Q9LVQ5	2.0e-104	27.40	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9SZ52	5.4e-102	28.70	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
Q76C99	2.7e-101	30.06	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]

BLAST of Lsi04G007980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDQ1	0.0e+00	85.89	pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Cucumis ...	[more]
A0A5A7SXZ3	0.0e+00	85.76	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KPZ1	0.0e+00	84.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175760 PE=4 SV=1	[more]
A0A6J1CEU1	0.0e+00	81.54	pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Momordic...	[more]
A0A6J1FS28	0.0e+00	81.92	pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Cucurbit...	[more]

BLAST of Lsi04G007980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892348.1	0.0e+00	90.14	pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Benincasa ...	[more]
XP_008445872.1	0.0e+00	85.89	PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial ...	[more]
KAA0034065.1	0.0e+00	85.76	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_031741907.1	0.0e+00	84.73	pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Cucumis sa...	[more]
XP_022139073.1	0.0e+00	81.54	pentatricopeptide repeat-containing protein At5g61990, mitochondrial [Momordica ...	[more]

BLAST of Lsi04G007980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61990.1	6.6e-212	40.45	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G59900.1	7.2e-118	30.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55840.1	1.4e-105	27.40	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G31850.1	3.9e-103	28.70	proton gradient regulation 3	[more]
AT4G19440.1	5.2e-100	30.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 882..1023 e-value: 7.3E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 333..402 e-value: 6.0E-20 score: 73.5 coord: 718..791 e-value: 4.8E-23 score: 83.7 coord: 403..473 e-value: 4.4E-22 score: 80.5 coord: 474..543 e-value: 1.6E-19 score: 72.2 coord: 69..260 e-value: 6.4E-16 score: 60.4 coord: 544..614 e-value: 6.4E-18 score: 66.9 coord: 261..332 e-value: 9.4E-23 score: 82.7 coord: 615..717 e-value: 1.8E-33 score: 117.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 792..881 e-value: 6.8E-25 score: 90.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 377..411 e-value: 6.8E-9 score: 33.4 coord: 797..829 e-value: 6.7E-9 score: 33.4 coord: 623..656 e-value: 7.0E-7 score: 27.0 coord: 658..691 e-value: 1.6E-10 score: 38.5 coord: 902..934 e-value: 0.0023 score: 16.0 coord: 692..726 e-value: 1.5E-10 score: 38.5 coord: 763..792 e-value: 7.6E-7 score: 26.9 coord: 447..481 e-value: 3.2E-9 score: 34.4 coord: 482..515 e-value: 6.3E-8 score: 30.3 coord: 202..236 e-value: 0.002 score: 16.2 coord: 517..551 e-value: 4.0E-9 score: 34.1 coord: 272..305 e-value: 5.4E-9 score: 33.7 coord: 587..621 e-value: 2.0E-6 score: 25.6 coord: 867..900 e-value: 0.0011 score: 17.0 coord: 237..270 e-value: 1.5E-7 score: 29.2 coord: 552..585 e-value: 8.8E-8 score: 29.9 coord: 307..340 e-value: 7.7E-9 score: 33.2 coord: 831..865 e-value: 2.6E-9 score: 34.7 coord: 727..761 e-value: 1.1E-10 score: 39.0 coord: 413..445 e-value: 3.9E-7 score: 27.8 coord: 342..375 e-value: 1.5E-7 score: 29.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 482..512 e-value: 4.5E-5 score: 23.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 852..911 e-value: 4.1E-5 score: 23.6 coord: 957..1001 e-value: 5.3E-4 score: 20.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 654..703 e-value: 8.3E-20 score: 70.7 coord: 514..558 e-value: 7.6E-12 score: 45.3 coord: 724..772 e-value: 2.0E-15 score: 56.7 coord: 795..841 e-value: 3.3E-15 score: 56.0 coord: 339..387 e-value: 9.3E-12 score: 45.0 coord: 199..248 e-value: 4.7E-9 score: 36.3 coord: 269..318 e-value: 2.3E-16 score: 59.7 coord: 584..632 e-value: 1.2E-11 score: 44.6 coord: 409..458 e-value: 1.0E-17 score: 64.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 690..724 score: 13.372844
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 235..269 score: 11.498462
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 515..549 score: 12.791895
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 480..514 score: 11.761533
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 410..444 score: 12.452094
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 969..1003 score: 10.040608
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 305..339 score: 12.802855
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 760..790 score: 9.404853
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 550..584 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 445..479 score: 13.054966
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 655..689 score: 14.063405
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 829..863 score: 12.463056
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 794..828 score: 12.715165
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 864..898 score: 8.95544
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 899..933 score: 9.481582
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 725..759 score: 14.326477
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 585..619 score: 11.366925
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 620..654 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 270..304 score: 13.241308
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 375..409 score: 12.74805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 340..374 score: 11.257313
None	No IPR available	PANTHER	PTHR47934:SF11	OS07G0300200 PROTEIN	coord: 31..799 coord: 797..1005
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 797..1005
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 31..799
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 409..616
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 597..821

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007980.1	Lsi04G007980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding