Lsi04G007920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G007920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	TCP family transcription factor
Location	chr04: 7451543 .. 7452319 (-)
RNA-Seq Expression	Lsi04G007920
Synteny	Lsi04G007920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

mRNA sequence

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

Coding sequence (CDS)

ATGTCAAATTCTGATCATACCAGCAACGCCAATGGCGTCTCTAATGGCGCCGCCATCGACACCCACAAGAATCAGCCCTCTTCTAATGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGACGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAGTCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCCACTGGCACTGGTACTACCCCTGCTAATTTCTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCATACTCGGCAAGCGCGTCAGGTCCGACGATGATGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTACGACGGGGCCAGGTGGGTACTGGGCGATTCCTGCAAGGCCCGATTATGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAATCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAGGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGTGGTGGTTCTGGGCGGCGGGAAGATGACCCTCGCTAA

Protein sequence

MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGGSGRREDDPR

Homology

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BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.8e-70
Identity = 164/266 (61.65%), Postives = 192/266 (72.18%), Query Frame = 0


Query: 2   SNSDHTSNANGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 61
           +N+++ +N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPII
Sbjct: 6   NNNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPII 65

Query: 62  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSAS 121
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   S S
Sbjct: 66  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTS 125

Query: 122 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKD--DGLGVGQAVGSIVGTTGPG 181
           L    ++           L G +PFILGKRVR+D+D  +  +   VG+       TT P 
Sbjct: 126 LDHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGK---DETFTTTPA 185

Query: 182 GYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ---PIREASAARVGNY 241
           G+WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 186 GFWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 245

Query: 242 LPGHLNLLASLSGGG-GSGRREDDPR 259
           LPGHLNLLASLSGG  GS RRE+DPR
Sbjct: 246 LPGHLNLLASLSGGSPGSDRREEDPR 250

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BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot
Match: Q9FTA2 (Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.6e-65
Identity = 157/267 (58.80%), Postives = 175/267 (65.54%), Query Frame = 0


Query: 9   NANGVSNGAAIDTHKNQPSSNGAL-VVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT 68
           N   VSNG  ++    Q S+ G L  VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT
Sbjct: 4   NDGAVSNGIIVE----QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT 63

Query: 69  RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTS 128
           RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                  
Sbjct: 64  RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLST----------------- 123

Query: 129 TLSLSRPQALSGPTPFILGKRVRSDDDGKD-----DGLGVGQAVG-SIVGTTGPGGYWAI 188
                        +PF LGKRV   ++G+       GL VG  +G S++G  G GG+WA+
Sbjct: 124 ------------SSPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAV 183

Query: 189 PARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ----------PIREASAARVG 248
           PARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVG
Sbjct: 184 PARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVG 235

Query: 249 NYLPG-HLNLLASLSGG-GGSGRREDD 257
           NYLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 NYLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.6e-32
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 29  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 88
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 89  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGP 141
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

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BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.4e-30
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 27  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 86
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 87  EPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTL 130
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

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BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot
Match: Q9C7G4 (Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.4e-29
Identity = 112/259 (43.24%), Postives = 140/259 (54.05%), Query Frame = 0


Query: 21  THKNQPSSNGALVV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 80
           T     SS  AL V     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 81  QTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSA-------SLSSPSSTTST- 140
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS        S SSP S  ST 
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTG 160

Query: 141 LSLSRP-QALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYWAIPARPDY 200
           +SL       +G +     K + S  +    G    Q    I+ T         P R DY
Sbjct: 161 MSLYEDNNGTNGSSVDPSRKLLNSAANAAVFGFH-HQMYPPIMSTERNPNTLVKPYREDY 220

Query: 201 GQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYL----PGHLN---- 258
            +  S +AA PSE        SQ+AS F +Q+      +A  V   +    PG  N    
Sbjct: 221 FKEPS-SAAEPSES-------SQKASQFQEQELAQGRGTANVVPQPMWAVAPGTTNGGSA 280

[Close]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL
Match: A0A5A7SY02 (Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00630 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 248/259 (95.75%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSN AAID+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD KDDGLGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL
Match: A0A1S3BDR1 (transcription factor TCP7-like OS=Cucumis melo OX=3656 GN=LOC103488772 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 248/259 (95.75%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSN AAID+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD KDDGLGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL
Match: A0A0A0KPX7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175170 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.4e-126
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD KDD LGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL
Match: A0A6J1KJS4 (transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122
Identity = 242/259 (93.44%), Postives = 243/259 (93.82%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD + N NGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSD-SGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS SLS
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GKDDGLGVGQAVGSIVGTTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD GKDDG G        VG TGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG--------VGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 250

[Close]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL
Match: A0A6J1H1R0 (transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.8e-121
Identity = 239/259 (92.28%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD + N NGVSNGAA+DTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 81  MSNSD-SGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 140

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS SLS
Sbjct: 141 ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLS 200

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GKDDGLGVGQAVGSIVGTTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD GKDDG G        VG TGPGGYW
Sbjct: 201 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG--------VGPTGPGGYW 260

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 261 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 320

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 321 LLASLSGGGGSGRREDDPR 330

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: XP_038893054.1 (transcription factor TCP7-like [Benincasa hispida])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 250/261 (95.79%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNG--AAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60
           MSNSDHT+NANGVSNG   AIDTHKNQPS+NGALVVKKPPSKDRHSKVDGRGRRIRMPII
Sbjct: 1   MSNSDHTTNANGVSNGTIVAIDTHKNQPSTNGALVVKKPPSKDRHSKVDGRGRRIRMPII 60

Query: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS-A 120
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS +
Sbjct: 61  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSVS 120

Query: 121 SLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGG 180
           SLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVG TGPGG
Sbjct: 121 SLSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGPTGPGG 180

Query: 181 YWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGH 240
           YWAIPARPDYGQVWSFAAAAPSEMVVQ GGISQ +SLFAQQQQPIREASAARVGNYLPGH
Sbjct: 181 YWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQHSSLFAQQQQPIREASAARVGNYLPGH 240

Query: 241 LNLLASLSGGGGSGRREDDPR 259
           LNLLASLSGGGGSGRREDDPR
Sbjct: 241 LNLLASLSGGGGSGRREDDPR 261

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: XP_008445886.1 (PREDICTED: transcription factor TCP7-like [Cucumis melo] >KAA0034075.1 transcription factor TCP7-like [Cucumis melo var. makuwa])

HSP 1 Score: 465.3 bits (1196), Expect = 3.4e-127
Identity = 248/259 (95.75%), Postives = 249/259 (96.14%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSN AAID+HKNQ SSNGAL VKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNAAAIDSHKNQSSSNGALAVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD KDDGLGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDAKDDGLGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQQGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: XP_004143620.1 (transcription factor TCP7 [Cucumis sativus] >KGN50442.1 hypothetical protein Csa_000312 [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 4.9e-126
Identity = 246/259 (94.98%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSDHT   NGVSNGA IDTHKN  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSDHT---NGVSNGATIDTHKNHSSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN-GGSASL 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGN GGSASL
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGGSASL 120

Query: 121 SSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYW 180
           SSPSSTTSTLSLSRPQ LSGPTPFILGKRVRSDDD KDD LGVGQAVGSIVG TGPGGYW
Sbjct: 121 SSPSSTTSTLSLSRPQPLSGPTPFILGKRVRSDDDAKDDALGVGQAVGSIVGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGI+QQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGIAQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 256

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: XP_022999463.1 (transcription factor TCP7-like [Cucurbita maxima])

HSP 1 Score: 448.0 bits (1151), Expect = 5.6e-122
Identity = 242/259 (93.44%), Postives = 243/259 (93.82%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD + N NGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 1   MSNSD-SGNTNGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS SLS
Sbjct: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLS 120

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GKDDGLGVGQAVGSIVGTTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD GKDDG G        VG TGPGGYW
Sbjct: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGTG--------VGPTGPGGYW 180

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQQQQPIREASAARVGNYLPGHLN
Sbjct: 181 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 241 LLASLSGGGGSGRREDDPR 250

[Close]

BLAST of Lsi04G007920 vs. NCBI nr
Match: XP_022957369.1 (transcription factor TCP7-like [Cucurbita moschata])

HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120
Identity = 239/259 (92.28%), Postives = 241/259 (93.05%), Query Frame = 0


Query: 1   MSNSDHTSNANGVSNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 60
           MSNSD + N NGVSNGAA+DTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA
Sbjct: 81  MSNSD-SGNTNGVSNGAAVDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICA 140

Query: 61  ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLS 120
           ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGS SLS
Sbjct: 141 ARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLS 200

Query: 121 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD-GKDDGLGVGQAVGSIVGTTGPGGYW 180
           SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDD GKDDG G        VG TGPGGYW
Sbjct: 201 SPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGAG--------VGPTGPGGYW 260

Query: 181 AIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYLPGHLN 240
           AIPARPDYGQVWSFAAAAPSEMVVQ GGISQQASLFAQ QQPIREASAARVGNYLP HLN
Sbjct: 261 AIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLN 320

Query: 241 LLASLSGGGGSGRREDDPR 259
           LLASLSGGGGSGRREDDPR
Sbjct: 321 LLASLSGGGGSGRREDDPR 330

[Close]

BLAST of Lsi04G007920 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71
Identity = 164/266 (61.65%), Postives = 192/266 (72.18%), Query Frame = 0


Query: 2   SNSDHTSNANGV---SNGAAIDTHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPII 61
           +N+++ +N +G+   SNGA I+    QPS    +VVKKPP+KDRHSKVDGRGRRIRMPII
Sbjct: 6   NNNNNNNNNDGLMISSNGALIE---QQPS----VVVKKPPAKDRHSKVDGRGRRIRMPII 65

Query: 62  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSAS 121
           CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ S+S+RG   S S
Sbjct: 66  CAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATNSTS 125

Query: 122 LSSPSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGKD--DGLGVGQAVGSIVGTTGPG 181
           L    ++           L G +PFILGKRVR+D+D  +  +   VG+       TT P 
Sbjct: 126 LDHKPTS----------LLGGTSPFILGKRVRADEDSNNSHNHSSVGK---DETFTTTPA 185

Query: 182 GYWAIPARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ---PIREASAARVGNY 241
           G+WA+PARPD+GQVWSF A AP EM +Q     QQ     QQQQ    + EASAARVGNY
Sbjct: 186 GFWAVPARPDFGQVWSF-AGAPQEMFLQQQHHHQQPLFVHQQQQQQAAMGEASAARVGNY 245

Query: 242 LPGHLNLLASLSGGG-GSGRREDDPR 259
           LPGHLNLLASLSGG  GS RRE+DPR
Sbjct: 246 LPGHLNLLASLSGGSPGSDRREEDPR 250

[Close]

BLAST of Lsi04G007920 vs. TAIR 10
Match: AT5G08330.1 (TCP family transcription factor )

HSP 1 Score: 248.8 bits (634), Expect = 4.7e-66
Identity = 157/267 (58.80%), Postives = 175/267 (65.54%), Query Frame = 0


Query: 9   NANGVSNGAAIDTHKNQPSSNGAL-VVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT 68
           N   VSNG  ++    Q S+ G L  VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT
Sbjct: 4   NDGAVSNGIIVE----QTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLT 63

Query: 69  RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTS 128
           RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPA+FS+ SLS                  
Sbjct: 64  RELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLST----------------- 123

Query: 129 TLSLSRPQALSGPTPFILGKRVRSDDDGKD-----DGLGVGQAVG-SIVGTTGPGGYWAI 188
                        +PF LGKRV   ++G+       GL VG  +G S++G  G GG+WA+
Sbjct: 124 ------------SSPFTLGKRVVRAEEGESGGGGGGGLTVGHTMGTSLMGGGGSGGFWAV 183

Query: 189 PARPDYGQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQ----------PIREASAARVG 248
           PARPD+GQVWSFA  AP EMV       Q A+LF + QQ           + EASAARVG
Sbjct: 184 PARPDFGQVWSFATGAPPEMVFAQQ--QQPATLFVRHQQQQQASAAAAAAMGEASAARVG 235

Query: 249 NYLPG-HLNLLASLSGG-GGSGRREDD 257
           NYLPG HLNLLASLSGG  GSGRREDD
Sbjct: 244 NYLPGHHLNLLASLSGGANGSGRREDD 235

[Close]

BLAST of Lsi04G007920 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 138.7 bits (348), Expect = 6.8e-33
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 29  NGALVVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 88
           +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL
Sbjct: 102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLL 161

Query: 89  RQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGP 141
           +QAEPS+IAATGTGT PANF+S+++S+R +G S SL  PS   S  S   P  +  P
Sbjct: 162 QQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSL--PSHFRSAASTFSPNNIFSP 216

[Close]

BLAST of Lsi04G007920 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-31
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 27  SSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQA 86
           SS       K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QA
Sbjct: 48  SSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQA 107

Query: 87  EPSIIAATGTGTTPANFSSVSLSVRGNGGSASLSSPSSTTSTL 130
           EP+I+AATGTGT PANFS++S+S+R +G  ++LS+P S +  L
Sbjct: 108 EPAIVAATGTGTIPANFSTLSVSLRSSG--STLSAPPSKSVPL 148

[Close]

BLAST of Lsi04G007920 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30
Identity = 112/259 (43.24%), Postives = 140/259 (54.05%), Query Frame = 0


Query: 21  THKNQPSSNGALVV----KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDG 80
           T     SS  AL V     K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG
Sbjct: 41  TSSTSTSSGSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDG 100

Query: 81  QTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSA-------SLSSPSSTTST- 140
           +TIEWLL+QAEP+IIA+TGTGT PANFS+++ S+R  GGS        S SSP S  ST 
Sbjct: 101 ETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGGGSTLFSQASKSSSSPLSFHSTG 160

Query: 141 LSLSRP-QALSGPTPFILGKRVRSDDDGKDDGLGVGQAVGSIVGTTGPGGYWAIPARPDY 200
           +SL       +G +     K + S  +    G    Q    I+ T         P R DY
Sbjct: 161 MSLYEDNNGTNGSSVDPSRKLLNSAANAAVFGFH-HQMYPPIMSTERNPNTLVKPYREDY 220

Query: 201 GQVWSFAAAAPSEMVVQSGGISQQASLFAQQQQPIREASAARVGNYL----PGHLN---- 258
            +  S +AA PSE        SQ+AS F +Q+      +A  V   +    PG  N    
Sbjct: 221 FKEPS-SAAEPSES-------SQKASQFQEQELAQGRGTANVVPQPMWAVAPGTTNGGSA 280

The following BLAST results are available for this feature:

BLAST of Lsi04G007920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	6.8e-70	61.65	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9FTA2	6.6e-65	58.80	Transcription factor TCP21 OS=Arabidopsis thaliana OX=3702 GN=TCP21 PE=1 SV=1	[more]
Q93Z00	9.6e-32	63.25	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C518	2.4e-30	66.99	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9C7G4	3.4e-29	43.24	Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1	[more]

BLAST of Lsi04G007920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY02	1.6e-127	95.75	Transcription factor TCP7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BDR1	1.6e-127	95.75	transcription factor TCP7-like OS=Cucumis melo OX=3656 GN=LOC103488772 PE=4 SV=1	[more]
A0A0A0KPX7	2.4e-126	94.98	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175170 PE=4 SV...	[more]
A0A6J1KJS4	2.7e-122	93.44	transcription factor TCP7-like OS=Cucurbita maxima OX=3661 GN=LOC111493818 PE=4 ...	[more]
A0A6J1H1R0	8.8e-121	92.28	transcription factor TCP7-like OS=Cucurbita moschata OX=3662 GN=LOC111458790 PE=...	[more]

BLAST of Lsi04G007920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893054.1	2.8e-129	95.79	transcription factor TCP7-like [Benincasa hispida]	[more]
XP_008445886.1	3.4e-127	95.75	PREDICTED: transcription factor TCP7-like [Cucumis melo] >KAA0034075.1 transcrip...	[more]
XP_004143620.1	4.9e-126	94.98	transcription factor TCP7 [Cucumis sativus] >KGN50442.1 hypothetical protein Csa...	[more]
XP_022999463.1	5.6e-122	93.44	transcription factor TCP7-like [Cucurbita maxima]	[more]
XP_022957369.1	1.8e-120	92.28	transcription factor TCP7-like [Cucurbita moschata]	[more]

BLAST of Lsi04G007920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	4.8e-71	61.65	TCP family transcription factor	[more]
AT5G08330.1	4.7e-66	58.80	TCP family transcription factor	[more]
AT3G47620.1	6.8e-33	63.25	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G58100.1	1.7e-31	66.99	TCP family transcription factor	[more]
AT1G72010.1	2.4e-30	43.24	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 39..125 e-value: 3.3E-33 score: 115.4
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 39..93 score: 28.209229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR31072:SF165	TRANSCRIPTION FACTOR TCP FAMILY-RELATED	coord: 1..255
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007920.1	Lsi04G007920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding