Lsi04G007840 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTATACATTCCTAAATCTCTCAATTTTCTATCTTTTTCTTCAATTTGAAAAAAAAAAGATGAAGACTACAATTCAATTACATATGTTGGGAATTCAGATGTCATTGGCTCTTGCAAGAGCTAGATATTTGGGTGCTCCCTCCAGGCATCTCCACATATCTTCTTCAGATGATGGATCTCAATCAATTAAGAAATGTAAGAGATATATAAGAAGAAGAAGAAGAAAGAAAGTTTTTTTTTTTTTGGATGAATATATAAATTGTTTTGCTAACTAATTTGGTTTCTGAGTTGTTGCAGATAATGGAAAAGATTGGATCTTGAATAGACTCAACAAAAATGGAAGAAAAACAAACAATGTCATTCACGCACTCCGAGAACATGGTAAGTCTTCTAAGAGATCTAAGAGCCTTTAGTTCATCCAACAACTCTAGAATAAAAAAAAACAATTGATCTATTATGATATATTTTTGATTATATATAATGTATGTAATTAAATTAGGGTAATAATATTTATAATGAATGAATTTTGCAGGTTGTGATTCCAAAGGAGAAGGTGAAGAGTGTAAATGAAAGTGAGAATAATGTTGAGAAAGGTTCAGAAAAGTACATAGAAATAGGGACAATGGACGACTTTGAATTTTGGTTTATGGGTTTTCTAAATTATCAATCAACTTTCAACTCTCTTCGAGGAGTAGACAGAAGACTGGGCTACAGATGATGCCAAATTATATTATATTTCAATTTTAATGTTGAAACATTGATTATTGTGTATAGATTAATTCAATAATCTAATGAGAAAATTCAATTTGAGATTTTCCAAGTTGAGATCA CCTCTATACATTCCTAAATCTCTCAATTTTCTATCTTTTTCTTCAATTTGAAAAAAAAAAGATGAAGACTACAATTCAATTACATATGTTGGGAATTCAGATGTCATTGGCTCTTGCAAGAGCTAGATATTTGGGTGCTCCCTCCAGGCATCTCCACATATCTTCTTCAGATGATGGATCTCAATCAATTAAGAAATATAATGGAAAAGATTGGATCTTGAATAGACTCAACAAAAATGGAAGAAAAACAAACAATGTCATTCACGCACTCCGAGAACATGGTTGTGATTCCAAAGGAGAAGGTGAAGAGTGTAAATGAAAGTGAGAATAATGTTGAGAAAGGTTCAGAAAAGTACATAGAAATAGGGACAATGGACGACTTTGAATTTTGGTTTATGGGTTTTCTAAATTATCAATCAACTTTCAACTCTCTTCGAGGAGTAGACAGAAGACTGGGCTACAGATGATGCCAAATTATATTATATTTCAATTTTAATGTTGAAACATTGATTATTGTGTATAGATTAATTCAATAATCTAATGAGAAAATTCAATTTGAGATTTTCCAAGTTGAGATCA ATGAAGACTACAATTCAATTACATATGTTGGGAATTCAGATGTCATTGGCTCTTGCAAGAGCTAGATATTTGGGTGCTCCCTCCAGGCATCTCCACATATCTTCTTCAGATGATGGATCTCAATCAATTAAGAAATATAATGGAAAAGATTGGATCTTGAATAGACTCAACAAAAATGGAAGAAAAACAAACAATGTCATTCACGCACTCCGAGAACATGGTTGTGATTCCAAAGGAGAAGGTGAAGAGTGTAAATGA MKTTIQLHMLGIQMSLALARARYLGAPSRHLHISSSDDGSQSIKKYNGKDWILNRLNKNGRKTNNVIHALREHGCDSKGEGEECK Homology
BLAST of Lsi04G007840 vs. ExPASy TrEMBL
Match: A0A6J1GW39 (putative GEM-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111458124 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Lsi04G007840 vs. ExPASy TrEMBL
Match: A0A6J1KB00 (putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111493833 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi04G007840 vs. ExPASy TrEMBL
Match: A0A5A7SUE9 (GEM-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00710 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.1e-23 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of Lsi04G007840 vs. ExPASy TrEMBL
Match: A0A1S3BEG1 (GEM-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103488778 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.1e-23 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of Lsi04G007840 vs. ExPASy TrEMBL
Match: A0A6J1KB26 (putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111493848 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.8e-22 Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of Lsi04G007840 vs. NCBI nr
Match: XP_022956362.1 (putative GEM-like protein 8 [Cucurbita moschata] >KAG6601068.1 GEM-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Lsi04G007840 vs. NCBI nr
Match: XP_023513103.1 (putative GEM-like protein 8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24 Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Lsi04G007840 vs. NCBI nr
Match: XP_038892955.1 (GEM-like protein 7 [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23 Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of Lsi04G007840 vs. NCBI nr
Match: XP_022999487.1 (putative GEM-like protein 8 [Cucurbita maxima]) HSP 1 Score: 118.6 bits (296), Expect = 2.6e-23 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Lsi04G007840 vs. NCBI nr
Match: KAA0034083.1 (GEM-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 1.7e-22 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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