Lsi04G007630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G007630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Location	chr04: 7118105 .. 7118650 (+)
RNA-Seq Expression	Lsi04G007630
Synteny	Lsi04G007630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTATTGCGAACAGTATCGGCGCGATACCATCGACGGCGCCGTCGTCGGCGTCGGCGGCTGCTCGTCCAGCCTCTTCTATGACGGTATTCTCTAGTGCTGATGTGAAATCGTCCTATTCCTCGTCCGTTTGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCTACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCCGGAACTTCGTCTTCGGCTACAGCTGTTTCGGCGGCGACGACGTCATTGTCAGAGGAAGAGACTGATGAAGCGGCTGCCGCTAAAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGTGTTTGGAAAGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTTGAAGGCCGTCCACCAGTCAAATTCGTCGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

mRNA sequence

ATGATCAGTATTGCGAACAGTATCGGCGCGATACCATCGACGGCGCCGTCGTCGGCGTCGGCGGCTGCTCGTCCAGCCTCTTCTATGACGGTATTCTCTAGTGCTGATGTGAAATCGTCCTATTCCTCGTCCGTTTGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCTACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCCGGAACTTCGTCTTCGGCTACAGCTGTTTCGGCGGCGACGACGTCATTGTCAGAGGAAGAGACTGATGAAGCGGCTGCCGCTAAAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGTGTTTGGAAAGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTTGAAGGCCGTCCACCAGTCAAATTCGTCGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Coding sequence (CDS)

ATGATCAGTATTGCGAACAGTATCGGCGCGATACCATCGACGGCGCCGTCGTCGGCGTCGGCGGCTGCTCGTCCAGCCTCTTCTATGACGGTATTCTCTAGTGCTGATGTGAAATCGTCCTATTCCTCGTCCGTTTGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCTACTGCTCGATTCGAAGAGGGAGAAGATTGTTTAGCGAGGTTCCAGTTAGATCAGATTCCGGAACTTCGTCTTCGGCTACAGCTGTTTCGGCGGCGACGACGTCATTGTCAGAGGAAGAGACTGATGAAGCGGCTGCCGCTAAAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCGAAGTTACCAGATGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGTGTTTGGAAAGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTTGAAGGCCGTCCACCAGTCAAATTCGTCGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Protein sequence

MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSIRRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHVAKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV

Homology

[Close]

BLAST of Lsi04G007630 vs. ExPASy Swiss-Prot
Match: P80680 (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 59/95 (62.11%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 88  ATTSLSEEETDEAAAAKIGARVRVKVPLKVYHVAKLPDANLEGMEGVLKDYVRVWKGKRV 147
           A+  ++ EE   AAA KIG RVRV  PL+VYHV K PD +++GMEGV+K YV VWKGKRV
Sbjct: 3   ASDDVAAEEA--AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRV 62

Query: 148 SANLPYKVEFVVPVEGRP-PVKFVAHLKEEEFEYV 182
           +AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Sbjct: 63  TANFPFKVEFELAVEGQPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of Lsi04G007630 vs. ExPASy Swiss-Prot
Match: P38365 (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 68/171 (39.77%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 13  STAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSIRRGR-RLFSEVP 72
           +TA S+A+A A   + + +F S   +++ S++VC  S++       +  R R  +  EV 
Sbjct: 11  ATAASTATATAAATARIPLFLS---RNNSSATVC--STLRCRTITRTRTRARLAICCEVA 70

Query: 73  VRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHVAKLPDANL-EG 132
           ++SDS T       S++++   E+E  +    K+G +V+VK PLKVYHV KLP+  L   
Sbjct: 71  LKSDSSTGFD----SSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPD 130

Query: 133 MEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 182
           M GV+K YV  WKGK +S N P+KVE+ + V  R  VK V HLKEEEFE +
Sbjct: 131 MVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 172

[Close]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL
Match: A0A0A0KV36 (FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.3e-80
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MISIANSIG IPS APSSAS AAR A SMTVFS+ADVKSS+SSSVCSLSS+VVNPF CSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLPDANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL
Match: A0A5D3D039 (Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003240 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI IANSIG +P   PSSAS AAR A SMTVFS++DV+SS+SSSVCSLSSVVVNPF CSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

Query: 181 V 182
           V
Sbjct: 962 V 962

[Close]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL
Match: A0A1S3BEI2 (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI IANSIG +P   PSSAS AAR A SMTVFS++DV+SS+SSSVCSLSSVVVNPF CSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL
Match: A0A6J1H0Z6 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458936 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.8e-71
Identity = 155/181 (85.64%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI++ANSIG IP+ AP+    AARPA SMTVFSS D KSSYS SV SLSSVVVNPF CSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL
Match: A0A6J1KDF2 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493885 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.9e-70
Identity = 154/181 (85.08%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI++ANSIG IP+ AP+    AARPA SMTVFSS D KSSYSSSV SLSSVVVNPF CSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT SSA AVSAA TSLSE+ETDEAAAA+IGARVRVKVPL VYHV
Sbjct: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]

BLAST of Lsi04G007630 vs. NCBI nr
Match: XP_038893043.1 (ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 8.3e-80
Identity = 170/181 (93.92%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MISIANSIG IP+ APSSASAAAR A SMTVFS ADVKSSYSSSVCSLSSVVVNPF CSI
Sbjct: 1   MISIANSIGVIPTPAPSSASAAARSACSMTVFSCADVKSSYSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTS SATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSPSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Lsi04G007630 vs. NCBI nr
Match: XP_004147092.1 (ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 hypothetical protein Csa_008440 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.1e-79
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MISIANSIG IPS APSSAS AAR A SMTVFS+ADVKSS+SSSVCSLSS+VVNPF CSI
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLPDANLEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]

BLAST of Lsi04G007630 vs. NCBI nr
Match: KAA0034101.1 (sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI IANSIG +P   PSSAS AAR A SMTVFS++DV+SS+SSSVCSLSSVVVNPF CSI
Sbjct: 782 MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 841

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 842 RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 901

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 902 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 961

Query: 181 V 182
           V
Sbjct: 962 V 962

[Close]

BLAST of Lsi04G007630 vs. NCBI nr
Match: XP_008445916.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76
Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI IANSIG +P   PSSAS AAR A SMTVFS++DV+SS+SSSVCSLSSVVVNPF CSI
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRRLFSEV VRSDSGTSSSATAVSAATTSLSEEETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+ANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KFVAHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

Query: 181 V 182
           V
Sbjct: 181 V 181

[Close]

BLAST of Lsi04G007630 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.3 bits (713), Expect = 2.4e-71
Identity = 156/181 (86.19%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MISIANSIGAIPSTAPSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSI 60
           MI++ANSIG IP+ AP+    AARPA SMTVFSS D KSSYS SV SLSSVVVNPF CSI
Sbjct: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSI 60

Query: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHV 120
           RRGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEAAAA+IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPDANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180
           AKLP+A+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY
Sbjct: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 177

Query: 181 V 182
           V
Sbjct: 181 V 177

[Close]

BLAST of Lsi04G007630 vs. TAIR 10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 )

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-30
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 26  ASSMTVFSSADVKSSYSSSVCSLSSVVVNPFYCSIRRGRRLFSEVPVRSDSGTSSSATAV 85
           +SS ++F    + +SY  S C+ S    NP   +IR    + S   V +D+  SSS    
Sbjct: 37  SSSSSIFVPISLSTSYGRSKCAFSISRKNP-KSTIRCDIAVKSAASVDADADLSSS---- 96

Query: 86  SAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHVAKLPDANLEGMEGVLKDYVRVWKGK 145
               TSL  EE DE A  KIGARVRV VPLKVYHV ++P+  L GMEG +KDYV +WKGK
Sbjct: 97  ----TSLETEE-DEKAKEKIGARVRVTVPLKVYHVVRVPEVELMGMEGFIKDYVVLWKGK 156

Query: 146 RVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 182
           ++SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Sbjct: 157 KISANLPFKVQFVKEIEGRGPVKFFTHLKEDEFELI 182

[Close]

BLAST of Lsi04G007630 vs. TAIR 10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 )

HSP 1 Score: 124.4 bits (311), Expect = 9.3e-29
Identity = 82/177 (46.33%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 15  APSSASAAARPASSMTVFSSADVKSSYSSSVCSLSSVVVNPF----------YCSIRRGR 74
           +P+ A+A  RP+S   + +SA   ++ +++  +L S +V P           + S R+  
Sbjct: 8   SPAIAAAIRRPSSHDCLSASA---TTATATPMALKSCIVAPLSLFTSQSQIKHSSSRKTS 67

Query: 75  RLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAAKIGARVRVKVPLKVYHVAKLP 134
           R      V   S  S +A A  +++ S SEEE +  A AKIG+RVRV  PLKVYHV ++P
Sbjct: 68  RTTIRCDVAIKSADSINADANPSSSPS-SEEEIEAEAKAKIGSRVRVTAPLKVYHVNRVP 127

Query: 135 DANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 182
           + +LEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VKFV+HLKE+EFE++
Sbjct: 128 EVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVKFVSHLKEDEFEFI 180

The following BLAST results are available for this feature:

BLAST of Lsi04G007630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80680	1.0e-24	62.11	Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1	[more]
P38365	1.6e-17	39.77	Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler...	[more]

BLAST of Lsi04G007630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV36	5.3e-80	93.92	FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 P...	[more]
A0A5D3D039	1.2e-76	90.06	Sphingoid long-chain bases kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BEI2	1.2e-76	90.06	ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1H0Z6	5.8e-71	85.64	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1KDF2	2.9e-70	85.08	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]

BLAST of Lsi04G007630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893043.1	8.3e-80	93.92	ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]	[more]
XP_004147092.1	1.1e-79	93.92	ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 h...	[more]
KAA0034101.1	2.5e-76	90.06	sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa] >TYK15819.1 sphin...	[more]
XP_008445916.1	2.5e-76	90.06	PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]	[more]
XP_023549490.1	2.4e-71	86.19	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]

BLAST of Lsi04G007630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08410.1	2.9e-30	50.64	ferredoxin/thioredoxin reductase subunit A (variable subunit) 2	[more]
AT5G23440.1	9.3e-29	46.33	ferredoxin/thioredoxin reductase subunit A (variable subunit) 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 105..177 e-value: 1.2E-25 score: 89.4
None	No IPR available	GENE3D	2.30.30.50		coord: 103..181 e-value: 2.1E-29 score: 103.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
IPR044166	Ferredoxin-thioredoxin reductase, variable chain	PANTHER	PTHR46937	FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAIN	coord: 20..181
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 104..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007630.1	Lsi04G007630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0030148	sphingolipid biosynthetic process
molecular_function	GO:0017050	D-erythro-sphingosine kinase activity
molecular_function	GO:0003951	NAD+ kinase activity