Lsi04G007610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G007610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box/LRR-repeat protein At4g29420
Location	chr04: 7098084 .. 7102954 (-)
RNA-Seq Expression	Lsi04G007610
Synteny	Lsi04G007610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTATTATTGAGTTATGCTAAAGTTGGATTTGATTAGTATACTTTATCCTTTGTGGTTTATATTGGTTGGTGGTGAAATTCCATTGTTTTTTCCTCACGTTCGTCCGTACGGAAGAAACCAAAATGAATATTCTTAAAAATCGTTGTTCGTTAATCACAATGATCGAAGCTCACCGTCAGCGAAGAAATGCATAAATTCATCGTCAGAAAATTTATAGAATCTATAACCGTTCTTCTTTTCCTCCGCCATGGACGATCTCCCGCCGTCGTTAGTTCTCGAAATCCTGAATCGATTGACCGATTCCGCCGATTTGGCTCGGTGCCGAATGGCTTCAAAATCTCTCAATGTTATCTCCCGCGAGGTTAGGTCAGTGAATCTCTTTTGTTCACTGGATCGCTATCTCAAGTCTAGGGCTACAGAGACGAAGTTGCTAGTAACGCCTTTCAAGGTCATATTGAAGACTCTGATGAATGATTTTTTGGCTCTTGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGAATTTCGTACGAGCACGACGATGTTGAGGATTGGTCTGATGATTTGTTTTTGACGGATGTTGGCTACGCTAAGGAATGGCTGCCGGCGATTGGGAGAAATTTGACGTCCTTATCGATCGTTGACTTTTGGGTTCAATCTTGCTGGAGGCAATCGAAGATTTTGGCTCTAATTACTTTGTGCTGTGAGTTTGGCTATCGAATTGCTCAAATTTTTGTCAATTTCATCATAATACTGTTTATGTTCATACGAGACTCTAGATAGAAGTTAAACCCACGTCTGAAAGACTGAAATTATATGACTTTTTTTCTTTTCCTGAGTTGTTAAAAACACTTAAATTGGCATGCTAGCTTAAGAATATGCGACGAAGAAACAGGAAAATATAAGGGATGGCTGCATATCTTTCACATCAAGGAAATATGGGGATATTGGGGATATTAAGAATTTGTATAAAAGATTAAATTTAATTCAAACAGATTGAATTCATGGTTCGTTTGGATAAAAAACAATTTCATTGATTGAATAAAATATCAAGGAGATATAGAAGGAGCCCATTTTATAGAGTATACAAAAGATGTCTCCAATTTGCATTTGCTATAAAAAAAAATTTTCAAACTATGACTTTGTAATAGCTGTAAATTTTTACACCAAAAGAATTAAAAAAAAAAAAAAAAGAGCATTGAATTTATGGGTTAAAGGGTGTTAAACTTTTAACACCTATTTGACCCATCTTCCCTGGTTAATATATGAGAACTATTTAGGGTGCTGGGATGAATAAAAGATGTAGTTCAAGTTGATTTTAGTAGTGATTTTACTATCATGTCAACTTTGAAAGTATAGTAGAATGTGACTTGTTACGGCACACCCTTCATTGCACGATAGTTCTTAAATCTTATGTATGATTTTCTCTGATGCGATACTTGTGATAGTCATATAATGAAGGTCGTGTTTAAGTGGTTTGACCATAGCTGAATGAATAGCATAGGTGCACTCGGCTTCTGAAGATGGAAAGGAGGACACCAAAAAAGAAACTTCATGGCGTGTCAACATGAGGCCTATGAAAGACCAAAATTTGATTAGTAAAATTATATATTTATATGGTTGAAATAAGTTGGATAAGAGGAGAAATAAGGAATGGGTGGTGTGAGCGCCCCCTACCTACTCACATGGATAAGAGCAGAGCAAGTACTGAGTAACAATTGACGTCGGCATGGATTTAGGAAAAGAGAGGTTTAGTTTCAGAGAGTGAAGCTGAGTATTTGGTATTCTAGACTATTTATTATTATTACTGTATTGTATGTCACATAGAACACTAATCATTGAAGAAGGATTTTTGTTTCCCATTAATGGAATGGAACTTGTCATTGAGATTTTCATCCAGGTAGATGTAAAAGTTGCCTGATACCAAGAACCACTAGTTTCCATCCCTTTGAAGTGATTTTGGTTATAATTTTGGCTGTATTTTTCATTCAAAATATTTCCATGACCTTAAATTTTATTGTCATTGTTCATTATTGACCTTCACGTGTTTCAACTTGTAGGCCGTAATCTTCTAGAGCTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGACTGCATAGAATGAAGTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGACGATGAAGATCTGAGCGAGGTTAACAGTAACTTCCCGCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCATCTGTTGCACCTTAAAACCTGTCAATGGACGGTGTCAAATGCTCCTGTTTCTCTGAGCATATATGCACCAAGCCTTTCGAAACTTGAACTGAAGTGTGTCAAACCAAAATCTCTTATCATCGAAACTCCCATGTTATCTGATTTCCATTTTTCTATAGAAGATGCAAGCGGGTTACAAGTTAGTGAATTTCCTTGCTTGAGAAAGCTTCATCTTCATTCTCCGTGTCTTCACAGTCTCATCACAACATTTTCATCTGCCAGAACTATAAAGGAACTCACACTGGATACGTTGCAACATGTTGAATCTATTGAATCTGTTAAGTTTTGCCTTGATACAGTTTTTGAAATATTTCCAAATCTTAGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCAGAGACTTGTTATCAAGCTGAAGGTTTGGAGAGACGGATGGGGATGAGAGATTTGAAAAAGATTCATTCTACATTCAAAACCAGCAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACGGACTCGTTCGATATGGCATTGCTTATCTATTACAATGCTGATTCTGACATTACTTGTGGAAGCATGCCAAAACGTGGAATTAATCATCCAAGACCAAGATGGAGATGGGAACTGTGGAAGGATGGATCAAGAGAAGCGTGGGCCAAGGGCAACTAAACTGTCAAGTCCAAACTTTTGCTCCCGAAGGTGCAAAGCTTCATAAGGAGGAAATCCAAGTTAGTTTAAGTGAAGACTTCCCTCCTTTGAATCTGGCAGACTTATGGGGTCTGTAAGATTACCAAAGAGTTCAGTAGATCCATGGAATGGCCCAAAAAGCAATCCTGTGTATGATGCCGAGTCTCTAAATTTTTCTTCGATCTTTTATCTTCAGATCTTTGCGTGAAGTCTCCTGTCGATATTTGGTCCGAGAAAAGCTGTCTGCTGCTGCTGAGAAATAATACATTGCTGAAGGGCCAGTTCTTTTGCACCTTCATTTAATACTCTACAAGGCAGCCTCAATAATTTGCATGGATCAGTGTGTATATATTTCCAGCCAAGTAATGTCATTTGTTCCCTACACAAGACTAGATATCTGATGCCTCTTATTTGGATAGAGAATGATTAATTTGTATCATAAACAATTTCATCCTTGAATCTGAATGCAATGCTCAGTAAGTGTATGGAGTTTACATACTTAAAAGTAATTGTGACAGACACAGTGAAGTCTGCATTCTATCTTAGCAGCCATGGTTGTATACTACTGAACATGCAGGTCACTGTGAGTCTAAGGATCGCAGTTGGAGAAAAGATGGGGTAATCACTAATCAGATGGTGACACTGCTCATGATCTCAAATTACCATGCCAGAGTTTCGAGCTGCCGTGAGCACCACCCTTTCCATCAAACCAGCTTTTGTATCGTAAGTGCACAGAAGAAATTCAAGTACTACGGTAGTATTGAAAAGTTTTCATACCACCGCTGTTCATTGTTTACCATAATAGTAGCATTTAACTAACGGATCCATAAAATAAAATTAAATCAATATATTATTTAATCATGCATCAAAATATAGATTGATTTACATACTACAGTAGTATTATAAATTTTCTCAGTGCACAGGTCAAGGTGTAGCTGTAGAGGGAAGGGATGGAGCATTCAGATGGAGTGGCAATGCTCATGATGTTATATTGCCATCCAGGTTCATTAAGTTGCTGGGAAGAGACAAAGGTTTATTTTTAATTTTTTAAAAGAAATTCTTAATTTTTAGTACATAAGAGTTGTTTTCAAATATAGTAAAATGAGCTAAAATATTTATAAATATAGCAAAATGTCACAGTCTATCAGTAATAGACATTGATATTTTGCTACATTTGAAAATACTTCCAGTAGTTTTGCCATTTAAAACAATTACTTTATTTCTTTTAACATTATTACTCTAAGAAAAAAAAGAGGTATTACAATTCAACAGGGAGTAGAGATTACCACTTTGAAGAAGCTTGGCCTTGAGTTGACTAAAGGAGGTATGTTTTCTTTGGTTAAAATATCATCTTGGTCTATATACTTTAAGTTTCGTTTCATTTTATTCCTTTCCTTGGTACTTTTAAATGTTCCAATTTAATCTCTAGTGTTAGTTTATTACTATTATTATTATTTTTTTTTTAAAAAAGAAGTTTGAAAAATATATTCACATAGTATCTTTTTTTGCATGAAAATTATTATTATTATTATTATTATTATTCGAATGACTAAATTATTGAGCAAATTCGTGTAAAGCTTAATCAGTTGAGATGTCTCAAATCACTTGATTGGAAATTCTAACTTTATACAGTTGATCAAGAAGATATTTTTCCATTACCAGCTGGGAAGGTCCAAATCTGTCTTCAATTTCAGTGATATCTAAATTTGTACATTCTTACATTTCTCACTCCCCCTTAGTTTTGTTTATTCCAATTCTTTTTATTTTATTTTATTTTATTTTATTATTATTATTATTATGAATGTTAGTGATTGTAAACTAGGGAGATCTTTCAAGTTCTGAATTTTTATTATTATTATGGGATTGGCATCTTCTTCTTCTCAAATTTATAGTTAGG

mRNA sequence

ATTTATTATTGAGTTATGCTAAAGTTGGATTTGATTAGTATACTTTATCCTTTGTGGTTTATATTGGTTGGTGGTGAAATTCCATTGTTTTTTCCTCACGTTCGTCCGTACGGAAGAAACCAAAATGAATATTCTTAAAAATCGTTGTTCGTTAATCACAATGATCGAAGCTCACCGTCAGCGAAGAAATGCATAAATTCATCGTCAGAAAATTTATAGAATCTATAACCGTTCTTCTTTTCCTCCGCCATGGACGATCTCCCGCCGTCGTTAGTTCTCGAAATCCTGAATCGATTGACCGATTCCGCCGATTTGGCTCGGTGCCGAATGGCTTCAAAATCTCTCAATGTTATCTCCCGCGAGGTTAGGTCAGTGAATCTCTTTTGTTCACTGGATCGCTATCTCAAGTCTAGGGCTACAGAGACGAAGTTGCTAGTAACGCCTTTCAAGGTCATATTGAAGACTCTGATGAATGATTTTTTGGCTCTTGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGAATTTCGTACGAGCACGACGATGTTGAGGATTGGTCTGATGATTTGTTTTTGACGGATGTTGGCTACGCTAAGGAATGGCTGCCGGCGATTGGGAGAAATTTGACGTCCTTATCGATCGTTGACTTTTGGGTTCAATCTTGCTGGAGGCAATCGAAGATTTTGGCTCTAATTACTTTGTGCTGCCGTAATCTTCTAGAGCTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGACTGCATAGAATGAAGTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGACGATGAAGATCTGAGCGAGGTTAACAGTAACTTCCCGCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCATCTGTTGCACCTTAAAACCTGTCAATGGACGGTGTCAAATGCTCCTGTTTCTCTGAGCATATATGCACCAAGCCTTTCGAAACTTGAACTGAAGTGTGTCAAACCAAAATCTCTTATCATCGAAACTCCCATGTTATCTGATTTCCATTTTTCTATAGAAGATGCAAGCGGGTTACAAGTTAGTGAATTTCCTTGCTTGAGAAAGCTTCATCTTCATTCTCCGTGTCTTCACAGTCTCATCACAACATTTTCATCTGCCAGAACTATAAAGGAACTCACACTGGATACGTTGCAACATGTTGAATCTATTGAATCTGTTAAGTTTTGCCTTGATACAGTTTTTGAAATATTTCCAAATCTTAGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCAGAGACTTGTTATCAAGCTGAAGGTTTGGAGAGACGGATGGGGATGAGAGATTTGAAAAAGATTCATTCTACATTCAAAACCAGCAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACGGACTCGTTCGATATGGCATTGCTTATCTATTACAATGCTGATTCTGACATTACTTGTGGAAGCATGCCAAAACGTGGAATTAATCATCCAAGACCAAGATGGAGATGGGAACTGTGGAAGGATGGATCAAGAGAAGCGTGGGCCAAGGGCAACTAAACTGTCAAGTCCAAACTTTTGCTCCCGAAGGTGCAAAGCTTCATAAGGAGGAAATCCAAGTTAGTTTAAGTGAAGACTTCCCTCCTTTGAATCTGGCAGACTTATGGGGTCTGTAAGATTACCAAAGAGTTCAGTAGATCCATGGAATGGCCCAAAAAGCAATCCTGTGTATGATGCCGAGTCTCTAAATTTTTCTTCGATCTTTTATCTTCAGATCTTTGCGTGAAGTCTCCTGTCGATATTTGGTCCGAGAAAAGCTGTCTGCTGCTGCTGAGAAATAATACATTGCTGAAGGGCCAGTTCTTTTGCACCTTCATTTAATACTCTACAAGGCAGCCTCAATAATTTGCATGGATCAGTGTGTATATATTTCCAGCCAAGTAATGTCATTTGTTCCCTACACAAGACTAGATATCTGATGCCTCTTATTTGGATAGAGAATGATTAATTTGTATCATAAACAATTTCATCCTTGAATCTGAATGCAATGCTCAGTAAGTGTATGGAGTTTACATACTTAAAAGTAATTGTGACAGACACAGTGAAGTCTGCATTCTATCTTAGCAGCCATGGTTGTATACTACTGAACATGCAGGTCACTGTGAGTCTAAGGATCGCAGTTGGAGAAAAGATGGGGTAATCACTAATCAGATGGTGACACTGCTCATGATCTCAAATTACCATGCCAGAGTTTCGAGCTGCCGTGAGCACCACCCTTTCCATCAAACCAGCTTTTGTATCGTAAGTGCACAGAAGAAATTCAAGTACTACGGTAGTATTGAAAAGTTTTCATACCACCGCTGTTCATTGTTTACCATAATAGTAGCATTTAACTAACGGATCCATAAAATAAAATTAAATCAATATATTATTTAATCATGCATCAAAATATAGATTGATTTACATACTACAGTAGTATTATAAATTTTCTCAGTGCACAGGTCAAGGTGTAGCTGTAGAGGGAAGGGATGGAGCATTCAGATGGAGTGGCAATGCTCATGATGTTATATTGCCATCCAGGTTCATTAAGTTGCTGGGAAGAGACAAAGGTTTATTTTTAATTTTTTAAAAGAAATTCTTAATTTTTAGTACATAAGAGTTGTTTTCAAATATAGTAAAATGAGCTAAAATATTTATAAATATAGCAAAATGTCACAGTCTATCAGTAATAGACATTGATATTTTGCTACATTTGAAAATACTTCCAGTAGTTTTGCCATTTAAAACAATTACTTTATTTCTTTTAACATTATTACTCTAAGAAAAAAAAGAGGTATTACAATTCAACAGGGAGTAGAGATTACCACTTTGAAGAAGCTTGGCCTTGAGTTGACTAAAGGAGTTGATCAAGAAGATATTTTTCCATTACCAGCTGGGAAGGTCCAAATCTGTCTTCAATTTCAGTGATATCTAAATTTGTACATTCTTACATTTCTCACTCCCCCTTAGTTTTGTTTATTCCAATTCTTTTTATTTTATTTTATTTTATTTTATTATTATTATTATTATGAATGTTAGTGATTGTAAACTAGGGAGATCTTTCAAGTTCTGAATTTTTATTATTATTATGGGATTGGCATCTTCTTCTTCTCAAATTTATAGTTAGG

Coding sequence (CDS)

ATGGACGATCTCCCGCCGTCGTTAGTTCTCGAAATCCTGAATCGATTGACCGATTCCGCCGATTTGGCTCGGTGCCGAATGGCTTCAAAATCTCTCAATGTTATCTCCCGCGAGGTTAGGTCAGTGAATCTCTTTTGTTCACTGGATCGCTATCTCAAGTCTAGGGCTACAGAGACGAAGTTGCTAGTAACGCCTTTCAAGGTCATATTGAAGACTCTGATGAATGATTTTTTGGCTCTTGATTCTGTGTCGATCGGTGTGGAGAGGTCACTCGGACGAATTTCGTACGAGCACGACGATGTTGAGGATTGGTCTGATGATTTGTTTTTGACGGATGTTGGCTACGCTAAGGAATGGCTGCCGGCGATTGGGAGAAATTTGACGTCCTTATCGATCGTTGACTTTTGGGTTCAATCTTGCTGGAGGCAATCGAAGATTTTGGCTCTAATTACTTTGTGCTGCCGTAATCTTCTAGAGCTTGAATTGAAGAATGCTTGGTTGTCAGTGGATGGACTGCATAGAATGAAGTCCCTCAAATGTCTGACCCTTGAATTTATAAGATTAGACGATGAAGATCTGAGCGAGGTTAACAGTAACTTCCCGCATCTTGAAGTTCTTAATTTGATAGGGGTTGGAGGCCTAAACGAACCAAAAATTCATCTGTTGCACCTTAAAACCTGTCAATGGACGGTGTCAAATGCTCCTGTTTCTCTGAGCATATATGCACCAAGCCTTTCGAAACTTGAACTGAAGTGTGTCAAACCAAAATCTCTTATCATCGAAACTCCCATGTTATCTGATTTCCATTTTTCTATAGAAGATGCAAGCGGGTTACAAGTTAGTGAATTTCCTTGCTTGAGAAAGCTTCATCTTCATTCTCCGTGTCTTCACAGTCTCATCACAACATTTTCATCTGCCAGAACTATAAAGGAACTCACACTGGATACGTTGCAACATGTTGAATCTATTGAATCTGTTAAGTTTTGCCTTGATACAGTTTTTGAAATATTTCCAAATCTTAGCTTTCTTAAATTGGGCCCTGGAGTTTTGTCAGAAGCAGAGACTTGTTATCAAGCTGAAGGTTTGGAGAGACGGATGGGGATGAGAGATTTGAAAAAGATTCATTCTACATTCAAAACCAGCAAGATTGAGTTAAAACTTCCATTTATCATTTCCATTTTGGAAAAATGTACGGACTCGTTCGATATGGCATTGCTTATCTATTACAATGCTGATTCTGACATTACTTGTGGAAGCATGCCAAAACGTGGAATTAATCATCCAAGACCAAGATGGAGATGGGAACTGTGGAAGGATGGATCAAGAGAAGCGTGGGCCAAGGGCAACTAA

Protein sequence

MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETKLLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWLPAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKCLTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSIYAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLITTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAEGLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSMPKRGINHPRPRWRWELWKDGSREAWAKGN

Homology

[Close]

BLAST of Lsi04G007610 vs. ExPASy Swiss-Prot
Match: Q9M0E1 (F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 PE=2 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.6e-114
Identity = 215/449 (47.88%), Postives = 307/449 (68.37%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MD+LPP L ++IL+R+ DS  LARCR+ASK+LN +SREVR+VNL C+  RYLKSR+    
Sbjct: 1   MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           ++VTPFK I ++L+ +   + S+S+GV+++L  +S++  + ED S DL+LTDV + KEWL
Sbjct: 61  VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           P +  +L +LSI DFW+QSCWR+S ILALI+  C  L++LE+KNAWLSV GL  M +L+ 
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDE+L +VN  FP L+ LNLIGVGGL EP+IH LHLK+C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            AP+L +L+LKC KPKSL++ETP L   H S+EDA G+   EF  L+ L L SP ++ LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           +  S    IK+L +D+++ +E  E ++  L T+ + FP ++ L L P   S+ ET +Q++
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360

Query: 361 -GLERRMGMRDLKKIHSTFKTS---KIELKLPFIISILEKCTDSFDMALLIYYNADSDIT 420
            GL    G   LK+I +  + S    +   + FI SI+ K     DM L+I+ + D  + 
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420

Query: 421 CGSMPKRGINHPRPRWRWELWKDGSREAW 446
              +    +++PR RW+W +W +G  + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445

[Close]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL
Match: A0A5D3CX32 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003230 PE=4 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 2.7e-234
Identity = 407/449 (90.65%), Postives = 423/449 (94.21%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SR+VRSVNLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTL+NDFLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIG+NLTSLSIVDFWVQSCWRQSKILALITLCC NLLELELKNAWLSVDGLHRM SLK 
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSE+N+NFPHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPK LIIETPMLSDFHF +EDASGLQV EFPCLRKLHLH PCLHSLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTLDT+Q  ES+ESVKFCLDTVFEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKK HS+ KT+KIELKLPFII ILEKCTDSFDMALL+Y NADSD+T G M
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR IN  RPRWRWELWK GSREAWAKGN
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL
Match: A0A1S4DWD1 (F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 2.7e-234
Identity = 407/449 (90.65%), Postives = 423/449 (94.21%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SR+VRSVNLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTL+NDFLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIG+NLTSLSIVDFWVQSCWRQSKILALITLCC NLLELELKNAWLSVDGLHRM SLK 
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSE+N+NFPHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPK LIIETPMLSDFHF +EDASGLQV EFPCLRKLHLH PCLHSLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTLDT+Q  ES+ESVKFCLDTVFEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKK HS+ KT+KIELKLPFII ILEKCTDSFDMALL+Y NADSD+T G M
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR IN  RPRWRWELWK GSREAWAKGN
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL
Match: A0A0A0KPS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G581670 PE=4 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 4.4e-229
Identity = 402/449 (89.53%), Postives = 420/449 (93.54%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKS+NV+SR+VRSVNLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSINVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTL+N+FLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLVNEFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           P+IG+NLTSLSIVDFWVQSCWRQSKILALITL C NLLELELKNAWLSVDGLHRM SLK 
Sbjct: 121 PSIGKNLTSLSIVDFWVQSCWRQSKILALITLYCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSE+N+NFPHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPK LIIETPMLSDFHF +EDASGLQV EFPCLRKLHLH P LHSLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPRLHSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSART+KELTLDT+Q  ESIESVKFCLDTVFEIFPNLSFLKLGPGVL EAET YQAE
Sbjct: 301 TTFSSARTLKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLLEAETFYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKK  S  KT+KIELKLPFIISILEKCTDSFDM LL+Y NADSDIT G M
Sbjct: 361 GLEGRMGMRDLKKNLSNLKTNKIELKLPFIISILEKCTDSFDMTLLLYQNADSDITGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR INH RPRWRWELWK+GSREAWAKGN
Sbjct: 421 SKRAINHRRPRWRWELWKEGSREAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL
Match: A0A6J1G095 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498 PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 3.3e-224
Identity = 385/449 (85.75%), Postives = 418/449 (93.10%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SREVRSVNLFCSLDRYLKSRA ET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLV PFKVILK+LMNDF+ALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVG+A+EWL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIGR LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+ SLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSEVN NFPHLE+LNLIGVGGLNEPKIHL HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            APSLSKLELKCVKPKSLII+TPMLSDFHF ++DASGLQV+EFPCLRKL LH PCL+SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTL+T+Q  ES+ESVK CLDT+FEIFPNLSFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GL+ R+GMRDLKK+H++ +T KIELKLPFII ILEKCTDS DM LLIY NADS +  G M
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR +NHPRP+WRWELWK+G +E WAKG+
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKGH 449

[Close]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL
Match: A0A6J1HNV0 (F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 3.1e-222
Identity = 382/448 (85.27%), Postives = 416/448 (92.86%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL+DSADLARCR+ASKSLNV+SREVRSVNLFCSLDRYLKSRA ET+
Sbjct: 1   MDDLPPSLVLEILNRLSDSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLV PFKVILK+LMNDF+ALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVG+A+EWL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIGR LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+ SLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSEVN NFPHLE+LNLIGVGGLNEPKIHL  LKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSQLKTCRWTVSNAPVSLSI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            APSLSKLELKCVKPKSLII+TPM+SDFHF ++DASGLQV+EFPCLRKL LH PCL+SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMVSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTL+T+Q  ES+ESVK CLDT+FEIFPNLSFLKLGPGV SEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GL+ R+GMRDLKKIH++ +T KIELKLPFII ILEKCTDS  M LLIY+NADS +  G M
Sbjct: 361 GLDGRIGMRDLKKIHASLETYKIELKLPFIIPILEKCTDSLGMELLIYHNADSHLAGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKG 449
            KR +NHPRP+WRWELWK+G +E WAKG
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKG 448

[Close]

BLAST of Lsi04G007610 vs. NCBI nr
Match: XP_038893164.1 (F-box/LRR-repeat protein At4g29420 [Benincasa hispida])

HSP 1 Score: 844.0 bits (2179), Expect = 6.1e-241
Identity = 417/449 (92.87%), Postives = 431/449 (95.99%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPP LVLEILNRL DSADLARCR+ASKSLNV+SREVRSVNLFCSLDRYLKSRATETK
Sbjct: 1   MDDLPPPLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRATETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTLMNDFLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLMNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC
Sbjct: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSEVN NFPHLEVLNL+GVGGLNEPKIHLLHLKTC+W VSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNCNFPHLEVLNLMGVGGLNEPKIHLLHLKTCKWKVSNAPVSLSI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPKSLIIETPMLSDFHF +EDASGLQV+ FPCLRKLHLHSPCL SLI
Sbjct: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFCLEDASGLQVNGFPCLRKLHLHSPCLDSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTLDT+Q  ESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKKIHS+ KT KIE+KLPFIISILEKCTD FDMALL+Y+NADSDIT G +
Sbjct: 361 GLEGRMGMRDLKKIHSSLKTYKIEVKLPFIISILEKCTDPFDMALLVYHNADSDITGGII 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
           PKR  NHPRPRWRWELWK+GS EAWAKGN
Sbjct: 421 PKRATNHPRPRWRWELWKEGSMEAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. NCBI nr
Match: XP_016900301.1 (PREDICTED: F-box/LRR-repeat protein At4g29420 [Cucumis melo] >KAA0034102.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK15818.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 820.8 bits (2119), Expect = 5.6e-234
Identity = 407/449 (90.65%), Postives = 423/449 (94.21%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SR+VRSVNLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTL+NDFLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLVNDFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIG+NLTSLSIVDFWVQSCWRQSKILALITLCC NLLELELKNAWLSVDGLHRM SLK 
Sbjct: 121 PAIGKNLTSLSIVDFWVQSCWRQSKILALITLCCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSE+N+NFPHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPK LIIETPMLSDFHF +EDASGLQV EFPCLRKLHLH PCLHSLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPCLHSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTLDT+Q  ES+ESVKFCLDTVFEIFPNL FLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLDTMQRAESVESVKFCLDTVFEIFPNLCFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKK HS+ KT+KIELKLPFII ILEKCTDSFDMALL+Y NADSD+T G M
Sbjct: 361 GLEGRMGMRDLKKNHSSLKTNKIELKLPFIIPILEKCTDSFDMALLLYQNADSDVTGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR IN  RPRWRWELWK GSREAWAKGN
Sbjct: 421 SKRAINQRRPRWRWELWKQGSREAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. NCBI nr
Match: XP_004147091.1 (F-box/LRR-repeat protein At4g29420 [Cucumis sativus] >KGN51583.1 hypothetical protein Csa_008551 [Cucumis sativus])

HSP 1 Score: 803.5 bits (2074), Expect = 9.2e-229
Identity = 402/449 (89.53%), Postives = 420/449 (93.54%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKS+NV+SR+VRSVNLFCSLDRYLKSRA ETK
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSINVLSRDVRSVNLFCSLDRYLKSRAAETK 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLVTPFKVILKTL+N+FLALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVGYAKEWL
Sbjct: 61  LLVTPFKVILKTLVNEFLALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           P+IG+NLTSLSIVDFWVQSCWRQSKILALITL C NLLELELKNAWLSVDGLHRM SLK 
Sbjct: 121 PSIGKNLTSLSIVDFWVQSCWRQSKILALITLYCCNLLELELKNAWLSVDGLHRMNSLKY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSE+N+NFPHLEVLNLIGVGGLNEPKI LLHLKTC+WTVSNAPVSL I
Sbjct: 181 LTLEFIRLDDEDLSELNNNFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPVSLCI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
           YAPSLSKLELKCVKPK LIIETPMLSDFHF +EDASGLQV EFPCLRKLHLH P LHSLI
Sbjct: 241 YAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPRLHSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSART+KELTLDT+Q  ESIESVKFCLDTVFEIFPNLSFLKLGPGVL EAET YQAE
Sbjct: 301 TTFSSARTLKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLLEAETFYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GLE RMGMRDLKK  S  KT+KIELKLPFIISILEKCTDSFDM LL+Y NADSDIT G M
Sbjct: 361 GLEGRMGMRDLKKNLSNLKTNKIELKLPFIISILEKCTDSFDMTLLLYQNADSDITGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR INH RPRWRWELWK+GSREAWAKGN
Sbjct: 421 SKRAINHRRPRWRWELWKEGSREAWAKGN 449

[Close]

BLAST of Lsi04G007610 vs. NCBI nr
Match: XP_022945179.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita moschata])

HSP 1 Score: 787.3 bits (2032), Expect = 6.8e-224
Identity = 385/449 (85.75%), Postives = 418/449 (93.10%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SREVRSVNLFCSLDRYLKSRA ET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLV PFKVILK+LMNDF+ALDSVSIGVE+SLGRISYEHDDVEDWSDDLFLTDVG+A+EWL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYEHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIGR LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+ SLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSEVN NFPHLE+LNLIGVGGLNEPKIHL HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            APSLSKLELKCVKPKSLII+TPMLSDFHF ++DASGLQV+EFPCLRKL LH PCL+SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTL+T+Q  ES+ESVK CLDT+FEIFPNLSFLKLGPGVLSEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVLSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GL+ R+GMRDLKK+H++ +T KIELKLPFII ILEKCTDS DM LLIY NADS +  G M
Sbjct: 361 GLDGRIGMRDLKKLHASLETYKIELKLPFIIPILEKCTDSLDMELLIYRNADSHLAGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKGN 450
            KR +NHPRP+WRWELWK+G +E WAKG+
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKGH 449

[Close]

BLAST of Lsi04G007610 vs. NCBI nr
Match: XP_023542813.1 (F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 784.6 bits (2025), Expect = 4.4e-223
Identity = 383/448 (85.49%), Postives = 416/448 (92.86%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MDDLPPSLVLEILNRL DSADLARCR+ASKSLNV+SREVRSVNLFCSLDRYLKSRA ET+
Sbjct: 1   MDDLPPSLVLEILNRLADSADLARCRVASKSLNVLSREVRSVNLFCSLDRYLKSRAVETR 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           LLV PFKVILK+LMNDF+ALDSVSIGVE+SLGRISY HDDVEDWSDDLFLTDVG+A+EWL
Sbjct: 61  LLVMPFKVILKSLMNDFVALDSVSIGVEKSLGRISYWHDDVEDWSDDLFLTDVGFAREWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           PAIGR LTSLSIVDFWVQSCWRQSKILALITLCC NL ELELKNAWLSVDGL+R+ SLKC
Sbjct: 121 PAIGRGLTSLSIVDFWVQSCWRQSKILALITLCCGNLQELELKNAWLSVDGLNRLNSLKC 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDEDLSEVN NFPHLE+LNLIGVGGLNEPKIHL HLKTC+WTVSNAPVSLSI
Sbjct: 181 LTLEFIRLDDEDLSEVNYNFPHLEILNLIGVGGLNEPKIHLSHLKTCRWTVSNAPVSLSI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            APSLSKLELKCVKPKSLII+TPMLSDFHF ++DASGLQV+EFPCLRKL LH PCL+SLI
Sbjct: 241 CAPSLSKLELKCVKPKSLIIQTPMLSDFHFCLQDASGLQVNEFPCLRKLQLHFPCLYSLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           TTFSSARTIKELTL+T+Q  ES+ESVK CLDT+FEIFPNLSFLKLGPGV SEAETCYQAE
Sbjct: 301 TTFSSARTIKELTLNTMQRAESVESVKLCLDTLFEIFPNLSFLKLGPGVFSEAETCYQAE 360

Query: 361 GLERRMGMRDLKKIHSTFKTSKIELKLPFIISILEKCTDSFDMALLIYYNADSDITCGSM 420
           GL+ R+GMRDLKKIH++ +T K+ELKLPFII ILEKCTDS DM LLIY+NADS +  G M
Sbjct: 361 GLDERIGMRDLKKIHASLETYKVELKLPFIIPILEKCTDSLDMELLIYHNADSHLAGGIM 420

Query: 421 PKRGINHPRPRWRWELWKDGSREAWAKG 449
            KR +NHPRP+WRWELWK+G +E WAKG
Sbjct: 421 SKRAVNHPRPKWRWELWKEGLKEPWAKG 448

[Close]

BLAST of Lsi04G007610 vs. TAIR 10
Match: AT4G29420.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 412.9 bits (1060), Expect = 3.2e-115
Identity = 215/449 (47.88%), Postives = 307/449 (68.37%), Query Frame = 0


Query: 1   MDDLPPSLVLEILNRLTDSADLARCRMASKSLNVISREVRSVNLFCSLDRYLKSRATETK 60
           MD+LPP L ++IL+R+ DS  LARCR+ASK+LN +SREVR+VNL C+  RYLKSR+    
Sbjct: 1   MDELPPELWIKILSRINDSESLARCRVASKTLNSLSREVRAVNLICTWSRYLKSRSI--- 60

Query: 61  LLVTPFKVILKTLMNDFLALDSVSIGVERSLGRISYEHDDVEDWSDDLFLTDVGYAKEWL 120
           ++VTPFK I ++L+ +   + S+S+GV+++L  +S++  + ED S DL+LTDV + KEWL
Sbjct: 61  VVVTPFKTIFRSLIENSSKIRSISVGVDKALKGMSFDDFNEED-SKDLYLTDVEFVKEWL 120

Query: 121 PAIGRNLTSLSIVDFWVQSCWRQSKILALITLCCRNLLELELKNAWLSVDGLHRMKSLKC 180
           P +  +L +LSI DFW+QSCWR+S ILALI+  C  L++LE+KNAWLSV GL  M +L+ 
Sbjct: 121 PRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAWLSVVGLTEMPNLRY 180

Query: 181 LTLEFIRLDDEDLSEVNSNFPHLEVLNLIGVGGLNEPKIHLLHLKTCQWTVSNAPVSLSI 240
           LTLEFIRLDDE+L +VN  FP L+ LNLIGVGGL EP+IH LHLK+C WTVSNAP+SL+I
Sbjct: 181 LTLEFIRLDDENLEKVNDCFPFLQELNLIGVGGLKEPRIHFLHLKSCHWTVSNAPLSLAI 240

Query: 241 YAPSLSKLELKCVKPKSLIIETPMLSDFHFSIEDASGLQVSEFPCLRKLHLHSPCLHSLI 300
            AP+L +L+LKC KPKSL++ETP L   H S+EDA G+   EF  L+ L L SP ++ LI
Sbjct: 241 VAPNLLELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLI 300

Query: 301 TTFSSARTIKELTLDTLQHVESIESVKFCLDTVFEIFPNLSFLKLGPGVLSEAETCYQAE 360
           +  S    IK+L +D+++ +E  E ++  L T+ + FP ++ L L P   S+ ET +Q++
Sbjct: 301 SNISFGNKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDIETHFQSQ 360

Query: 361 -GLERRMGMRDLKKIHSTFKTS---KIELKLPFIISILEKCTDSFDMALLIYYNADSDIT 420
            GL    G   LK+I +  + S    +   + FI SI+ K     DM L+I+ + D  + 
Sbjct: 361 GGLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVR 420

Query: 421 CGSMPKRGINHPRPRWRWELWKDGSREAW 446
              +    +++PR RW+W +W +G  + W
Sbjct: 421 SNLISTCMMSNPRVRWKWGMWAEGGEDMW 445

The following BLAST results are available for this feature:

BLAST of Lsi04G007610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0E1	4.6e-114	47.88	F-box/LRR-repeat protein At4g29420 OS=Arabidopsis thaliana OX=3702 GN=At4g29420 ...	[more]

BLAST of Lsi04G007610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CX32	2.7e-234	90.65	F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DWD1	2.7e-234	90.65	F-box/LRR-repeat protein At4g29420 OS=Cucumis melo OX=3656 GN=LOC103488800 PE=4 ...	[more]
A0A0A0KPS5	4.4e-229	89.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G581670 PE=4 SV=1	[more]
A0A6J1G095	3.3e-224	85.75	F-box/LRR-repeat protein At4g29420 OS=Cucurbita moschata OX=3662 GN=LOC111449498...	[more]
A0A6J1HNV0	3.1e-222	85.27	F-box/LRR-repeat protein At4g29420 OS=Cucurbita maxima OX=3661 GN=LOC111466376 P...	[more]

BLAST of Lsi04G007610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893164.1	6.1e-241	92.87	F-box/LRR-repeat protein At4g29420 [Benincasa hispida]	[more]
XP_016900301.1	5.6e-234	90.65	PREDICTED: F-box/LRR-repeat protein At4g29420 [Cucumis melo] >KAA0034102.1 F-box...	[more]
XP_004147091.1	9.2e-229	89.53	F-box/LRR-repeat protein At4g29420 [Cucumis sativus] >KGN51583.1 hypothetical pr...	[more]
XP_022945179.1	6.8e-224	85.75	F-box/LRR-repeat protein At4g29420 [Cucurbita moschata]	[more]
XP_023542813.1	4.4e-223	85.49	F-box/LRR-repeat protein At4g29420 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi04G007610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29420.1	3.2e-115	47.88	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 64..398 e-value: 3.6E-10 score: 40.8
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 2..446
None	No IPR available	PANTHER	PTHR31215:SF23	OS01G0193500 PROTEIN	coord: 2..446
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 111..345
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007610.1	Lsi04G007610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding