Lsi04G007580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G007580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr04: 7060526 .. 7064648 (-)
RNA-Seq Expression	Lsi04G007580
Synteny	Lsi04G007580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATAGATGAACAATAAAATTAATTAAAAAAAGAATCGAGTTTTTTAAAATTAAAATTCCATTGTTATCATTTTCAAAAATTTAGTTCTCACATTTGATCATCACCTCTCTCAAATGCTAACTCCACTCAAGCTCACCAATGGCAACATCCCTTGCGTCGTTTTCCCGGTAGCGCCCTAAAAGCTTCACTCGAATTTGAAAATTCTGCAAAATTGTACATTCTGAATGCGTAACCATTTTTGTTTCTTCAGGATTCGAACGAATTGCAGTCGAAAACAATTTCCAGAGCTTCCCCGCCATTTCGCGCCCCAAAACCGGATAAGCTTTTTTGTTAGTCGGAACCCTAGCTTCCGACTCTGCCTCAGCAATGCCGAAATTAGTGTAAGTGTTCCTCAGTGAAATGGCAAAACAGCAATCTCTCTCACTTTCTACACTTTACTTCTTTCATTCTATGGTGTTTTATCCACTTGATTCAGAATCTAGCGCCCTAATTTTTTTTGGGTCGTTTCTCAGTGACTCTCTGTCATCCATTTGGCCTCATCAGTATTTTCGTTTGAATTATGTTACTACTTCTTATATACTTCAGAATTGAATTTCTATATTACATGGCTGACCAGCTCTGCATTTTGGACATTACCAGCAAAGGAAAACAAAGGGAGGCATTTTGTATTATTTTAATTTGTTCTTAAAGACTACGGAAAAAATAATAATAAAAGAGAGGGAGAGAGAGAGAGATTTTGTTCTAAGCAGAAGTTCAATCACACAGGACAAGAAGAGAAGAGGTGGTGTAAGATGCATTTAGCTGGTTGGAGTCACTGGAAGTTTGTTTCTATGAAGTTATTTTCCATTTTTAACTGTTGGGTTGGTTTCTAATGACTGCAATTGTTTATATGAATAGAATGTGGCAGTATATGAAATTTTAGGCATGAATGTTCCTATATTTGGACAAGTGTATATGTTCCTGATTAGACACTGTCAATGCCTTTTCGTAGGCCAACGATCCATTGAAATCTGAGGATGGCTTTTCCAATCATGAAATGGAAGGTATGCCATAAAGAATCTAACCTATGAATATATGGTTGAGTTTTGATGCATTCAGTGAACTTTAGTTCAAATGTCATATTCTTGATCAATAACTTAAGAATTCTCATCTGCTGATTTCTTGCCTTTTCACTTTTTTGGAGTTTGTATCAATATTCTCTTTTCATTTTCATAGTGAGAAGTTTCGTATCTTGTTAAAAAAGAGAAAAAAGAACTTAAGAATTCTCATCTCTTTCCTTCCCTCTCTCGTTAGGTTCAATGGAAAAGAATGAGAATAGTGAGAAACATCCCTGGAAATCAAATGAGTACTACACTACTTGCCTTGCATACATTTGGTGAATTCTAAGGCTACTGCTTTTTTCTGTTAATAATGTCATGGTGGTGGTGAGACCTTCCTTTTTTTGCTCAAGCTCTCTACTCTCTAGCTTCTGATCAAAGTTATACCAGTAGAACAAAACTTAGCCTCCACAGTGGAATAAGCTACAAAGATTGTCTATTTCATGTTCCACTAATATTTGGACTTTTTTGTTGGTTATGTCATTGTTTATTTATATTGGTATATTTATTTTCCATTTAAAAAAATTGGATCTCAGATTATATTTGATCCCCTAAAAATAAACCACATCAAAGAGTAAGTCAGAGATCTTTAAACAGACAATTTTTCTTGTTTATTTTTTAATATATATATATTATTTATTCATGGAGATAGCTTTGCAATTCTAAAATTTTGGAGTACATAAATATTTATGTTGGGTACTGATTACATAAGGTTATAAATTGACCAAGAAACAAAATTTCCGTTTAGTAACCACATGAAATGAAACAAAAATCTTTTTGGCTTCATCGAAACGATACAAAGATCGTCTTGGCTTTATCAAAAGGAAACAATGATCTTCTTGGCTTTACCGAAATGAGACAAAAATCTTCTTGGCTTTATCGAAAGGAAACAAAGATCGTCTTGGCTTTATATTTCTTCTCGACTTTATCTTATTGGATGCATCAATGCGGTCTTCATATTAGGTATATATCAGTTTTTTTATTACATTTCATGCTTGCCCACTTATTCTAGTACATGTTCATCTTGTAGGGTACTGGATAAATTGAGGAGATATGGAATTTCTGGAATATTGTCTTACGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTCATTGTGTGGTGAGTCCATTGCTTTATTATCTACTTATTTACTACTATAATAAATTTATTATTATTATTATGTTGGTGTGACATAATGCGACCTGTGTCTAATATGAGGCTTCATAACTTTAGGAGGTTGATTCAGTATGTATGTTGGTTTTGAGAATTGGATATTGAGGGATGGTAATGATTAGGCATGGAAATTGTATAGAAAGATAGGTAACAATTAAGAAACTACAGTAAGATTTTGAAAGTAATTCTAGGAACTTGGATCCTCCCCCCCCAGCTTGAACAATCACAATATTGTCTACCTTCTCTTGTTGACCAATTCCCCTAGTCTAGTAATTATTCTCTGGCACACTACCCTGCTACATACAAATTACCTCTACTCTCTAATCCTACAAATAACTATTTGCGAAACTTTTTTTACGGAATGGTTGTAGCTAATGTTGATATCAATCTTACCTTTGGCCATCGTCAACATGAGGTTCCAATTTCTATACCTTTGGGATGTATTTCGATAACGTGTCGGGTGAGGCATAGTTTCTTTTTTTAGGATATCCCAAGATTGGATCCAATGGAGACGGGGTAGCATTTATAGCTCTGAGGATTAGAGCACATGGTTGTGAACTATGGATGCATACTACCTGCACCTGGACAAAAAAAACCTTGTGAAGTTCCACTTTAGGAGAGCTAGAATTTCAAAACGTACGGGCTTAAGGGTTGAGGTGCTAAGCGATGACATTTCAGCCTTTTGGACATGATTCTTGCTTTCGATCAATATTGATGCTAGTGGGACTCTGATTAAAAACACCTTTACTACCTGATCAGTGGGCGATAATTTATTTTATTTTATTGTAATTTATTTATTTATTTATTTATTCAGAAAATAACACTCCTTATGTTATATAACTTTCGTTTGTCTTCTGTTTATATCATCACTCTTCCATTAGCAGTCTACTCAGTCTTGTTATCAAATTATTTATTTGCATTTTAGGTTCTATATTGCACCAGCACCTGCGAAAATGGGCTATGTTGCGGCTGCTGGAAGGTGAAAAATTTATTTGTAGGAGCCCCTTTTTGTATGGCTAGCTGCTTTACTCCTTTTTTTGGGCTGTCTTTTTGTCCAATGTTAATGAAAGCCTGGTTTTCCGTTAGAAGAGATACTTATGTGTGATGGAGCTTTATACTAAGACGATGACACATTATTACCTTGTAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACCAAGCTTGCAAGAGCTGCAGGGTGAGCTCTTATATTCCTGCTTATTATCAAGTACTTTTCTGATACATGTGATTCTGCCTATCAAGTATCAAACAACCCAACTATATGAACTGTAAAAATGGCATTCAAATATTCCAATTTCTAAGGCCCTGTTTGATAACATCTTTGTTTCGGATTTTCTATTTCTAAAATTATATACTCATTTGCCAACTTATTCTATGCTTTCAAATCTATTTTCTAGATTGTTTTTTTCTAAAAAAATAAAACTTTTAAAATATGGTTTATGCTTTGAAAATTTCAAAAAACGGAAAACAAAATCATTATCTAGTAGGAGGTTAAATCTCATTCCCCTTTCGATTCTTGAAACGAGGAAGCAACCTGTTAAATCGAGGCTTCTCATTCATGCAGGGCTCTTGCTCTGGCACCATTTGTCGACAGAGGATTGTCGTGGTTCACTGTCAAATACAACTTTGAGTCTCAGGGGAAGGTTACTAGAAACGAAACTTCTATTCATCCATTTTGTTTCTTGTTTCACTCTATTGATGTTATGCTTAATGTTAAACCATCTCCAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA

mRNA sequence

AAAAAATAGATGAACAATAAAATTAATTAAAAAAAGAATCGAGTTTTTTAAAATTAAAATTCCATTGTTATCATTTTCAAAAATTTAGTTCTCACATTTGATCATCACCTCTCTCAAATGCTAACTCCACTCAAGCTCACCAATGGCAACATCCCTTGCGTCGTTTTCCCGGATTCGAACGAATTGCAGTCGAAAACAATTTCCAGAGCTTCCCCGCCATTTCGCGCCCCAAAACCGGATAAGCTTTTTTGTTAGTCGGAACCCTAGCTTCCGACTCTGCCTCAGCAATGCCGAAATTAGTGCCAACGATCCATTGAAATCTGAGGATGGCTTTTCCAATCATGAAATGGAAGGAAACAATGATCTTCTTGGCTTTACCGAAATGAGACAAAAATCTTCTTGGCTTTATCGAAAGGAAACAAAGATCGTCTTGGCTTTATATTTCTTCTCGACTTTATCTTATTGGATGCATCAATGCGGTCTTCATATTAGGGTACTGGATAAATTGAGGAGATATGGAATTTCTGGAATATTGTCTTACGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTCATTGTGTGGTTCTATATTGCACCAGCACCTGCGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACCAAGCTTGCAAGAGCTGCAGGGGCTCTTGCTCTGGCACCATTTGTCGACAGAGGATTGTCGTGGTTCACTGTCAAATACAACTTTGAGTCTCAGGGGAAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA

Coding sequence (CDS)

ATGGCAACATCCCTTGCGTCGTTTTCCCGGATTCGAACGAATTGCAGTCGAAAACAATTTCCAGAGCTTCCCCGCCATTTCGCGCCCCAAAACCGGATAAGCTTTTTTGTTAGTCGGAACCCTAGCTTCCGACTCTGCCTCAGCAATGCCGAAATTAGTGCCAACGATCCATTGAAATCTGAGGATGGCTTTTCCAATCATGAAATGGAAGGAAACAATGATCTTCTTGGCTTTACCGAAATGAGACAAAAATCTTCTTGGCTTTATCGAAAGGAAACAAAGATCGTCTTGGCTTTATATTTCTTCTCGACTTTATCTTATTGGATGCATCAATGCGGTCTTCATATTAGGGTACTGGATAAATTGAGGAGATATGGAATTTCTGGAATATTGTCTTACGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTCATTGTGTGGTTCTATATTGCACCAGCACCTGCGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACCAAGCTTGCAAGAGCTGCAGGGGCTCTTGCTCTGGCACCATTTGTCGACAGAGGATTGTCGTGGTTCACTGTCAAATACAACTTTGAGTCTCAGGGGAAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA

Protein sequence

MATSLASFSRIRTNCSRKQFPELPRHFAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA

Homology

[Close]

BLAST of Lsi04G007580 vs. ExPASy TrEMBL
Match: A0A1S3BDD7 (uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488806 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.1e-84
Identity = 181/241 (75.10%), Postives = 191/241 (79.25%), Query Frame = 0


Query: 1   MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLK 60
           MA SLAS SRIR+NCSR QFPELPR F+ PQ+RI F VSRNPS RLCLSNA+ISANDPLK
Sbjct: 1   MAISLASLSRIRSNCSRSQFPELPRRFSPPQSRIRFSVSRNPSVRLCLSNAKISANDPLK 60

Query: 61  SEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVL 120
           SED FSNHE EG+ +     E RQK     +K  +                       VL
Sbjct: 61  SEDDFSNHETEGSMEK---NENRQKHP---QKSNE-----------------------VL 120

Query: 121 DKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS 180
           DKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS
Sbjct: 121 DKLRRYGLSGILSYGLLNTAYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS 180

Query: 181 QVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLS 240
           QVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLS
Sbjct: 181 QVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKAFMAIVGFCLGLALLLFIVVTLLS 212

[Close]

BLAST of Lsi04G007580 vs. ExPASy TrEMBL
Match: A0A6J1J0R3 (uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482401 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.5e-69
Identity = 150/207 (72.46%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 34  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKET 93
           + FVSRNPS R CL+NAEISANDPLKSE GFSNHE EG+       E  +      RK  
Sbjct: 44  NIFVSRNPSIRQCLNNAEISANDPLKSESGFSNHETEGS------MEKNENHKKHPRKS- 103

Query: 94  KIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA 153
                                 I VLDKLRRYG+SGILSYGLLNTVYYLTTFL+VWFYIA
Sbjct: 104 ----------------------IEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVVWFYIA 163

Query: 154 PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQ 213
           PAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQ
Sbjct: 164 PAPAKMGYVAAAGRFLKIMATIWAGSQVTKLARAAGALAMAPFVDRGLSWFTVKYNFKSQ 221

Query: 214 GKAFMAIVGFCLGLALLLFIAVTLLSA 241
           GKA +AIVGFCLGL+LLLFIAVTLLSA
Sbjct: 224 GKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Lsi04G007580 vs. ExPASy TrEMBL
Match: A0A6J1GY06 (uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC111458238 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 9.5e-69
Identity = 151/214 (70.56%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 27  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSS 86
           F     I+ FVSRNPS R CL+NAEISANDPLKSE+GFSNHE EG+ +     E  QK  
Sbjct: 37  FRVSKPINIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEK---NENHQKHP 96

Query: 87  WLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFL 146
                                        I VLDKLRRYG+SGILSYGLLNTVYYLTTFL
Sbjct: 97  --------------------------QKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFL 156

Query: 147 IVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTV 206
           +VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDR LSWFTV
Sbjct: 157 VVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTV 216

Query: 207 KYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA 241
           KYNF+SQGKA +AIVGFCLGL+LLLFIAVTLLSA
Sbjct: 217 KYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Lsi04G007580 vs. ExPASy TrEMBL
Match: A0A5A7SW01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00960 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 139/187 (74.33%), Postives = 145/187 (77.54%), Query Frame = 0


Query: 54  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCG 113
           ANDPLKSED FSNHE EG+ +     E RQK     +K  +                   
Sbjct: 44  ANDPLKSEDDFSNHETEGSMEK---NENRQKHP---QKSNE------------------- 103

Query: 114 LHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMA 173
               VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMA
Sbjct: 104 ----VLDKLRRYGLSGILSYGLLNTAYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMA 163

Query: 174 TVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI 233
           TVWAGSQVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI
Sbjct: 164 TVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKAFMAIVGFCLGLALLLFI 201

Query: 234 AVTLLSA 241
            VTLLSA
Sbjct: 224 VVTLLSA 201

[Close]

BLAST of Lsi04G007580 vs. ExPASy TrEMBL
Match: A0A5D3CXY6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003180 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 7.3e-61
Identity = 136/187 (72.73%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 54  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCG 113
           ANDPLKSED FSNHE E         E+      ++   T   + +    +L  ++    
Sbjct: 44  ANDPLKSEDDFSNHETE---------ELENSYLLIFCLVTPFGVCILEQYSLFIFLE--- 103

Query: 114 LHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMA 173
              +VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMA
Sbjct: 104 ---KVLDKLRRYGLSGILSYGLLNTAYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMA 163

Query: 174 TVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI 233
           TVWAGSQVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI
Sbjct: 164 TVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKAFMAIVGFCLGLALLLFI 215

Query: 234 AVTLLSA 241
            VTLLSA
Sbjct: 224 VVTLLSA 215

[Close]

BLAST of Lsi04G007580 vs. NCBI nr
Match: XP_008445925.1 (PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo] >XP_008445926.1 PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo])

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-84
Identity = 181/241 (75.10%), Postives = 191/241 (79.25%), Query Frame = 0


Query: 1   MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLK 60
           MA SLAS SRIR+NCSR QFPELPR F+ PQ+RI F VSRNPS RLCLSNA+ISANDPLK
Sbjct: 1   MAISLASLSRIRSNCSRSQFPELPRRFSPPQSRIRFSVSRNPSVRLCLSNAKISANDPLK 60

Query: 61  SEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVL 120
           SED FSNHE EG+ +     E RQK     +K  +                       VL
Sbjct: 61  SEDDFSNHETEGSMEK---NENRQKHP---QKSNE-----------------------VL 120

Query: 121 DKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS 180
           DKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS
Sbjct: 121 DKLRRYGLSGILSYGLLNTAYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS 180

Query: 181 QVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLS 240
           QVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLS
Sbjct: 181 QVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKAFMAIVGFCLGLALLLFIVVTLLS 212

[Close]

BLAST of Lsi04G007580 vs. NCBI nr
Match: KAE8648632.1 (hypothetical protein Csa_009176 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 8.5e-72
Identity = 162/238 (68.07%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MATSLASFSRIRTNCSRKQFPELPRHFAP-QNRISFFVSRNPSFRLCLSNAEISANDPLK 60
           MA SLASFSRIR+NCSR Q PELPRHFAP Q++I F VSRNPS R CLSNA+ISANDPLK
Sbjct: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSQIRFSVSRNPSVRFCLSNAKISANDPLK 60

Query: 61  SEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVL 120
           SED FSNHEMEG+ +     E +QK     +K  +                       VL
Sbjct: 61  SEDDFSNHEMEGSMEK---NENQQKHP---QKSNE-----------------------VL 120

Query: 121 DKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGS 180
           DKLRRYG+SGILSYGLLNTVYYLTTFL+VWFYIAPAP KMGYVAAAGRFLKIMATVWAGS
Sbjct: 121 DKLRRYGLSGILSYGLLNTVYYLTTFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGS 180

Query: 181 QVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTL 238
           QVTKLARAAGALALAPFVDRGLSWFTV YNFESQGK         +   L  FI V L
Sbjct: 181 QVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKVARKETSIHVFCFLFHFIDVKL 209

[Close]

BLAST of Lsi04G007580 vs. NCBI nr
Match: XP_022983937.1 (uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 5.1e-69
Identity = 150/207 (72.46%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 34  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKET 93
           + FVSRNPS R CL+NAEISANDPLKSE GFSNHE EG+       E  +      RK  
Sbjct: 44  NIFVSRNPSIRQCLNNAEISANDPLKSESGFSNHETEGS------MEKNENHKKHPRKS- 103

Query: 94  KIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA 153
                                 I VLDKLRRYG+SGILSYGLLNTVYYLTTFL+VWFYIA
Sbjct: 104 ----------------------IEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVVWFYIA 163

Query: 154 PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQ 213
           PAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQ
Sbjct: 164 PAPAKMGYVAAAGRFLKIMATIWAGSQVTKLARAAGALAMAPFVDRGLSWFTVKYNFKSQ 221

Query: 214 GKAFMAIVGFCLGLALLLFIAVTLLSA 241
           GKA +AIVGFCLGL+LLLFIAVTLLSA
Sbjct: 224 GKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Lsi04G007580 vs. NCBI nr
Match: XP_023534257.1 (uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 5.1e-69
Identity = 156/229 (68.12%), Postives = 169/229 (73.80%), Query Frame = 0


Query: 16  SRKQFPELPRHFAPQNRIS----FFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEG 75
           S K  P+     +P  R+S     FVSRNPS R CL+NAEISANDPLKSE+GFSNHE EG
Sbjct: 22  SNKLQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEG 81

Query: 76  NNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGIL 135
           +       E  +      RK                        I VLDKLRRYG+SGIL
Sbjct: 82  S------MEKNENHKKHPRKS-----------------------IEVLDKLRRYGVSGIL 141

Query: 136 SYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGAL 195
           SYGLLNTVYYLTTFL+VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGAL
Sbjct: 142 SYGLLNTVYYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGAL 201

Query: 196 ALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA 241
           A+APFVDRGLSWFTVKYNF+SQGKA +AIVGFCLGL+LLLFIAVTLLSA
Sbjct: 202 AMAPFVDRGLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Lsi04G007580 vs. NCBI nr
Match: KAG6601085.1 (hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.9 bits (694), Expect = 5.1e-69
Identity = 152/214 (71.03%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 27  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSS 86
           F     I+ FVSRNPS R CL NAEISANDPLKSE+GFSNHE EG+ +     E  QK  
Sbjct: 37  FRVSKPINIFVSRNPSIRQCLDNAEISANDPLKSENGFSNHETEGSMEK---NENHQKHP 96

Query: 87  WLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFL 146
                                        I VLDKLRRYG+SGILSYGLLNTVYYLTTFL
Sbjct: 97  --------------------------QKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFL 156

Query: 147 IVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTV 206
           +VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTV
Sbjct: 157 VVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDRGLSWFTV 216

Query: 207 KYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA 241
           KYNF+SQGKA +AIVGFCLGL+LLLFIAVTLLSA
Sbjct: 217 KYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Lsi04G007580 vs. TAIR 10
Match: AT2G38695.1 (unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-48
Identity = 97/123 (78.86%), Postives = 108/123 (87.80%), Query Frame = 0


Query: 118 VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWA 177
           +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWA
Sbjct: 90  LLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWA 149

Query: 178 GSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTL 237
           GSQVTKL R  GA+ALAP VDRGLSWFTVK NFESQGKAF A+VG CLG+AL+LFI VTL
Sbjct: 150 GSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNFESQGKAFGALVGICLGMALMLFIVVTL 209

Query: 238 LSA 241
           L A
Sbjct: 210 LWA 212

[Close]

BLAST of Lsi04G007580 vs. TAIR 10
Match: AT2G38695.3 (unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 7.5e-42
Identity = 97/171 (56.73%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 118 VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWA 177
           +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWA
Sbjct: 90  LLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWA 149

Query: 178 GSQVTKLARAAG------------------------------------------------ 237
           GSQVTKL R  G                                                
Sbjct: 150 GSQVTKLIRIGGEHVKFLGDKHSRWMQDSRTCTCICSFDCYCRPYLVVMLLPMKNVDGCR 209

Query: 238 ALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA 241
           A+ALAP VDRGLSWFTVK NFESQGKAF A+VG CLG+AL+LFI VTLL A
Sbjct: 210 AVALAPIVDRGLSWFTVKCNFESQGKAFGALVGICLGMALMLFIVVTLLWA 260

[Close]

BLAST of Lsi04G007580 vs. TAIR 10
Match: AT2G38695.2 (unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 118 VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWA 177
           +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWA
Sbjct: 90  LLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWA 149

Query: 178 GSQVTKLARAAG 190
           GSQVTKL R  G
Sbjct: 150 GSQVTKLIRIGG 161

The following BLAST results are available for this feature:

BLAST of Lsi04G007580 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G007580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDD7	2.1e-84	75.10	uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1J0R3	2.5e-69	72.46	uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GY06	9.5e-69	70.56	uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A5A7SW01	2.5e-61	74.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CXY6	7.3e-61	72.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lsi04G007580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445925.1	4.3e-84	75.10	PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo] >XP_00...	[more]
KAE8648632.1	8.5e-72	68.07	hypothetical protein Csa_009176 [Cucumis sativus]	[more]
XP_022983937.1	5.1e-69	72.46	uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima]	[more]
XP_023534257.1	5.1e-69	68.12	uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6601085.1	5.1e-69	71.03	hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi04G007580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38695.1	1.1e-48	78.86	unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bac...	[more]
AT2G38695.3	7.5e-42	56.73	unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]
AT2G38695.2	3.4e-26	77.78	unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34370	OS04G0600100 PROTEIN	coord: 14..240
None	No IPR available	PANTHER	PTHR34370:SF2	GAG-POL POLYPROTEIN/RETROTRANSPOSON	coord: 14..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007580.1	Lsi04G007580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane