Lsi04G006940 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G006940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein FAM136A
Location	chr04: 6342766 .. 6344911 (+)
RNA-Seq Expression	Lsi04G006940
Synteny	Lsi04G006940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTTTCTCTGTTTCGGGGAATTTGGAAGGAAGAAGATGAATCACATAGCAGCAATGGAAGAGCAAGTAGTTTCTGAGAGAATGAGGCAAAAGCTTAACGAAGTGAACATGGCTGCGCAATCTCATCTTGGTCCTATTCAAGACCATGTCAATTTTTCCCTTCAGGTTTTCCTTTCTCTCCAATCGAACTTCTGTTTCTCTCTTTGGGATCTCCATTTTCAATCGTTTGTGGTTTCCTTTTGCTTGATATATAGATTTTAAATTAATTTTCATTATTCTTGAGTGCAGCAAGCATATTTCAAATGTGCATATGAGTGTTTCGACAGAAGAAGAAAACAGGAAGAGATTAGTAACTGCGTTGAGAACTGTAGTGTTCCAGTTGTTAAAGCCCAGCAACATGTTGAGAATGAAATGGCTAAGTTTCAAGTACGTGTTATTATCAATCTCCTTCCTTTTTATTTCATGCCTGTTTCCTCCTCCATGTTCTCCCTCGGTACACCATCTAACCGTTTAGTTCTTAAATCGTTAGTCCTTATAAAAATTCACACTTAATTTTGATCAAAATTTTTATAATAGGGACTAAATCAAATTGTAAAGTATAGTTACTAAATTGTTACAAATTTCATAGTATAAGCTTTGTTGCATTGCTGTACGATACACAAGTTGAATCGATTCAAGTTGAAACGAATGGTAGACGATTCAGCTTGCGATTTTGAATCGGAAATAATTAGTAAAAACTTTTTTTTTTTTAAAAAAAAGGCCTGAATTCTTCAATTCTAGCTCAAACTAGCTTTGATTTGGTTTTGAAATTGGATTTGCTGCCACATTACTTTGAAGGTTCATAGTTTTGGCCTTTAGAGGATAACCTAGTCCATGATTATCTTTCAAGGCTTTCATGGAAAAGTTCATCCACAACATTACCTCATCCTGCCGACACATATAATTATCTGCAGAGATGAGCTATATATTTCAGCATTACTCAGTAATGATCTAAAGCTTGAATTCACATCGTATAATTAATTTACACGATATGAGAATTGCATTATGGTGATGACTTGAAGTGTTGGTTTAGAATAACTTTCTAGCTCTTTATGGATACTCTTTTGATTTTAAAACACTCTGATACGACCATACTTGAACAGGATCTGTTCTATAGGAGGTTGTACATATGTGTCCTTGAGTTCTCAGATTTTAAAACACTCTGATTAAATTACAAGTTTGGTCCCTATAGTTTGGAGAAAGTTAGATTTGGTTTCTATGGATTTAAAAGTTTGAATTTTAGTCTCTTCTAGTTTGATAACATCTCATAAATAGTCCATATGATTTGATAGAACCTTTATAAATAGTCTTTGTAGTAGTGATTATTTTTGAGAATTTTATTAAACCATAGTGACTAAATTCTAATTATAAACCATGGAGACTAAATAAACCATAGTGATTATTTATAAATAGTCTTTGTGGTAGTGATTATTTCTGAGAATTTTATTAAACCATAGTGACTAAATTCTAATTATAAACTATGGAGACTAAATTCTAACATTCTCCAAACCATATGGACCAATTTTGCAATTTAACCTAACATTTTATCTAAAGCATTTTTTTAAAAAATAGAAACAACCAATTTCAATGAAAAAGAGCCAAGCATACAAAGAATCCAATTTTCAACTAAGTAAGATGTTACCCAAAGGAAAATTACAAAAAAATCTTTGAGACTGTAGCCCAAAGTAAAACATGGAACCTCACCGGGACCAAATATCACTAGAGTCCCTCTCCATCTCTAAACACTCTATTGGATATTGTTTCTCTCCGTCCAAAGATCCCACAACAAAGCTCACACTTTGATAAACCATAAAAGACAACATTTCTTTTTTAAAGGAAGATGGAGGAGGAACTCTTCTATCGTCTAAGACTACTTACAACATTTGAAAGGATTCATTCTCATGGTCTTGTTGTTATGTGAATGCAGGAAAGATTGAACAGATCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCCAGGCTTCAGCAGAAAACTGGGAGTGTATATGATTTGGAGTCGTGTGTGGATGCATCAATACAAGAAAGCTTGAATACATTGCCACATTTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGCAATTAA

mRNA sequence

GATTTTCTCTGTTTCGGGGAATTTGGAAGGAAGAAGATGAATCACATAGCAGCAATGGAAGAGCAAGTAGTTTCTGAGAGAATGAGGCAAAAGCTTAACGAAGTGAACATGGCTGCGCAATCTCATCTTGGTCCTATTCAAGACCATGTCAATTTTTCCCTTCAGCAAGCATATTTCAAATGTGCATATGAGTGTTTCGACAGAAGAAGAAAACAGGAAGAGATTAGTAACTGCGTTGAGAACTGTAGTGTTCCAGTTGTTAAAGCCCAGCAACATGTTGAGAATGAAATGGCTAAGTTTCAAGAAAGATTGAACAGATCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCCAGGCTTCAGCAGAAAACTGGGAGTGTATATGATTTGGAGTCGTGTGTGGATGCATCAATACAAGAAAGCTTGAATACATTGCCACATTTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGCAATTAA

Coding sequence (CDS)

GATTTTCTCTGTTTCGGGGAATTTGGAAGGAAGAAGATGAATCACATAGCAGCAATGGAAGAGCAAGTAGTTTCTGAGAGAATGAGGCAAAAGCTTAACGAAGTGAACATGGCTGCGCAATCTCATCTTGGTCCTATTCAAGACCATGTCAATTTTTCCCTTCAGCAAGCATATTTCAAATGTGCATATGAGTGTTTCGACAGAAGAAGAAAACAGGAAGAGATTAGTAACTGCGTTGAGAACTGTAGTGTTCCAGTTGTTAAAGCCCAGCAACATGTTGAGAATGAAATGGCTAAGTTTCAAGAAAGATTGAACAGATCACTAATGGTGTGCCAGGACAAGTTCGAAGCAGCCAGGCTTCAGCAGAAAACTGGGAGTGTATATGATTTGGAGTCGTGTGTGGATGCATCAATACAAGAAAGCTTGAATACATTGCCACATTTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGCAATTAA

Protein sequence

DFLCFGEFGRKKMNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

Homology

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BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot
Match: Q6PBU0 (Protein FAM136A OS=Danio rerio OX=7955 GN=fam136a PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10
Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 47  QDHVNFSLQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLN 106
           ++H+   +Q   F+C+ EC +       ++  C+E C  P+ KAQ  V +E+ +FQ+RL+
Sbjct: 22  KEHIR-KMQGRMFRCSAECCEHPGNSMNQVHQCIERCHTPLAKAQGLVTSELEQFQDRLS 81

Query: 107 RSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFN 158
           R  M C DK    F++   +    ++ D   CV + + E LN LP +  +LK S N
Sbjct: 82  RCTMHCSDKAKDLFDSGAKEPAVRALMD--GCVGSCVDEHLNLLPSMTRRLKDSLN 134

[Close]

BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot
Match: A4QNC6 (Protein FAM136A OS=Xenopus tropicalis OX=8364 GN=fam136a PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 54  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 113
           +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ  V NE+ +FQ RL R  M C 
Sbjct: 28  MQGKMFRCSAQCCEDNGASMQQVHHCIERCHTPLAQAQSLVTNELERFQNRLARCTMHCN 87

Query: 114 DK----FEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLK 154
           DK    F++   + +  +   LE CV    +E +N +P +  KLK
Sbjct: 88  DKAKDSFDSGSKEAQVKA--QLEGCVIKCAEEHMNLIPSMTKKLK 130

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BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot
Match: Q96C01 (Protein FAM136A OS=Homo sapiens OX=9606 GN=FAM136A PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 35  VNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHV 94
           V  A +S +  ++      +Q   F+C+  C  D +   +++  C+E C VP+ +AQ  V
Sbjct: 9   VQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVPLAQAQALV 68

Query: 95  ENEMAKFQERLNRSLMVCQDKFE------AARLQQKTGSVYDLESCVDASIQESLNTLPH 154
            +E+ KFQ+RL R  M C DK +      +  LQ K      L+SCV   + + ++ +P 
Sbjct: 69  TSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVK----QQLDSCVTKCVDDHMHLIPT 128

[Close]

BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot
Match: Q2HJI3 (Protein FAM136A OS=Bos taurus OX=9913 GN=FAM136A PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 34/110 (30.91%), Postives = 57/110 (51.82%), Query Frame = 0


Query: 54  LQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ 113
           +Q   F+C+  C +  +   +++  C+E C  P+ +AQ  V +E+ KFQ+RL R  M C 
Sbjct: 28  MQGLMFRCSAACCEESQASMQQVHQCIERCHAPLAQAQALVTSELEKFQDRLARCTMYCN 87

Query: 114 DKFEAARLQQKTGS-----VYDLESCVDASIQESLNTLPHLANKLKASFN 158
           DK   A+     GS        LE+CV   + + +N +P +  K+K S +
Sbjct: 88  DK---AKDSIDAGSKELHVKRQLETCVTKCVDDHMNLIPTMTRKMKESLS 134

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BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot
Match: Q63ZH8 (Protein FAM136A OS=Xenopus laevis OX=8355 GN=fam136a PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 33  NEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQ 92
           N +  A  S +  ++      +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ 
Sbjct: 7   NRLQNAVDSMVKSLERDNIRKMQGKMFRCSAQCCEDNGASMQQVHHCIERCHTPLAQAQS 66

Query: 93  HVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQESLNTLPH 152
            V  E+ +FQ RL+R  M C D+    F++   + +  +   LE CV    +E +N +P 
Sbjct: 67  LVTTELERFQNRLSRCTMNCSDQAKDAFDSGSKEAQVKA--QLEGCVIKCAEEHMNLIPS 126

Query: 153 LANKLK 154
           +  KLK
Sbjct: 127 MTKKLK 130

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BLAST of Lsi04G006940 vs. ExPASy TrEMBL
Match: A0A0A0KV92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589290 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.4e-75
Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQES+NTLPHLANKLKASFNI+N
Sbjct: 121 CVDASIQESMNTLPHLANKLKASFNITN 148

[Close]

BLAST of Lsi04G006940 vs. ExPASy TrEMBL
Match: A0A5D3CZ60 (Protein FAM136A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002360 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.9e-74
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNAAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMSKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESLNTLPHLANKLKASFNIGN 148

[Close]

BLAST of Lsi04G006940 vs. ExPASy TrEMBL
Match: A0A1S3BE24 (protein FAM136A OS=Cucumis melo OX=3656 GN=LOC103488877 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.9e-74
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNAAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMSKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESLNTLPHLANKLKASFNIGN 148

[Close]

BLAST of Lsi04G006940 vs. ExPASy TrEMBL
Match: A0A6J1DE11 (protein FAM136A OS=Momordica charantia OX=3673 GN=LOC111019665 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.4e-73
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGP+QDHVNF+LQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPVQDHVNFTLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPV+KAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVIKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNI 159
           CVD SIQESLNTLPHLA+KL+ASFNI
Sbjct: 121 CVDGSIQESLNTLPHLADKLRASFNI 146

[Close]

BLAST of Lsi04G006940 vs. ExPASy TrEMBL
Match: A0A6J1HSM6 (protein FAM136A-like OS=Cucurbita maxima OX=3661 GN=LOC111466410 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRRKQ
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAA+LQQKT SVY+LES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNSVYELES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVD+SIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDSSIQESLNTLPHLANKLKASFNIRN 148

[Close]

BLAST of Lsi04G006940 vs. NCBI nr
Match: XP_038893078.1 (protein FAM136A-like [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQESLNTLPHLANKLKASFNISN
Sbjct: 121 CVDASIQESLNTLPHLANKLKASFNISN 148

[Close]

BLAST of Lsi04G006940 vs. NCBI nr
Match: XP_004135332.1 (protein FAM136A [Cucumis sativus] >KGN51661.1 hypothetical protein Csa_009350 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 7.1e-75
Identity = 145/148 (97.97%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQES+NTLPHLANKLKASFNI+N
Sbjct: 121 CVDASIQESMNTLPHLANKLKASFNITN 148

[Close]

BLAST of Lsi04G006940 vs. NCBI nr
Match: XP_008446025.1 (PREDICTED: protein FAM136A [Cucumis melo] >KAA0034184.1 protein FAM136A [Cucumis melo var. makuwa] >TYK15736.1 protein FAM136A [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 6.0e-74
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNAAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMSKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVDASIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDASIQESLNTLPHLANKLKASFNIGN 148

[Close]

BLAST of Lsi04G006940 vs. NCBI nr
Match: XP_022151759.1 (protein FAM136A [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGP+QDHVNF+LQQAYFKCAYECFDRRR+Q
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPVQDHVNFTLQQAYFKCAYECFDRRRRQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPV+KAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES
Sbjct: 61  EEISNCVENCSVPVIKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNI 159
           CVD SIQESLNTLPHLA+KL+ASFNI
Sbjct: 121 CVDGSIQESLNTLPHLADKLRASFNI 146

[Close]

BLAST of Lsi04G006940 vs. NCBI nr
Match: XP_022945251.1 (protein FAM136A-like [Cucurbita moschata] >XP_022966815.1 protein FAM136A-like [Cucurbita maxima] >XP_023541572.1 protein FAM136A-like [Cucurbita pepo subsp. pepo] >KAG6573597.1 Family With Sequence Similarity 136 Member A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012719.1 hypothetical protein SDJN02_25472, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 9.6e-72
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRRKQ
Sbjct: 1   MNHIAAMEEQVVSERMRQKLNEVNMAAQAQLGPIQDHVNFTLQQAYFKCAYECFDRRRKQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGSVYDLES 132
           EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAA+LQQKT SVY+LES
Sbjct: 61  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAKLQQKTNSVYELES 120

Query: 133 CVDASIQESLNTLPHLANKLKASFNISN 161
           CVD+SIQESLNTLPHLANKLKASFNI N
Sbjct: 121 CVDSSIQESLNTLPHLANKLKASFNIRN 148

[Close]

BLAST of Lsi04G006940 vs. TAIR 10
Match: AT2G31725.1 (Eukaryotic protein of unknown function (DUF842) )

HSP 1 Score: 224.9 bits (572), Expect = 4.5e-59
Identity = 108/149 (72.48%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           M+HIAA EEQ+VSER+R+KL EVN+AAQ+ L PIQDH+NF+LQQAYFKCAYECFDRRRKQ
Sbjct: 1   MDHIAAAEEQIVSERLRRKLEEVNVAAQTQLSPIQDHINFTLQQAYFKCAYECFDRRRKQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQ-KTGSVYDLE 132
           EEISNCVE+CSVPVVK+QQ+ ENEMA+FQERLNRSL+VCQDKFEA++LQ+ +  +V ++E
Sbjct: 61  EEISNCVEHCSVPVVKSQQYFENEMAQFQERLNRSLVVCQDKFEASKLQKIRPEAVNEME 120

Query: 133 SCVDASIQESLNTLPHLANKLKASFNISN 161
           SCV  SI+E+LNTLPH+  ++K +FNI+N
Sbjct: 121 SCVHKSIEENLNTLPHIVQRMKTAFNITN 149

[Close]

BLAST of Lsi04G006940 vs. TAIR 10
Match: AT1G05730.1 (Eukaryotic protein of unknown function (DUF842) )

HSP 1 Score: 213.0 bits (541), Expect = 1.8e-55
Identity = 102/149 (68.46%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQ 72
           M+HIAA EEQ+V+ER+R+KL EVN  AQS L PIQDH+NF+LQQAYFKCAYECFDR RKQ
Sbjct: 1   MDHIAAAEEQIVTERIRRKLEEVNATAQSQLSPIQDHINFTLQQAYFKCAYECFDRNRKQ 60

Query: 73  EEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTG-SVYDLE 132
           EEI+NCVE+CSVPVV AQQH E EM++FQER+NRSLMVCQDKFEAA+L +  G +   +E
Sbjct: 61  EEIANCVEHCSVPVVNAQQHFEGEMSQFQERMNRSLMVCQDKFEAAKLHKNRGDAAKAME 120

Query: 133 SCVDASIQESLNTLPHLANKLKASFNISN 161
           SCV+ SI++SL+TLPH+  ++K SF+I++
Sbjct: 121 SCVNTSIEDSLDTLPHIVQRMKTSFSIAD 149

[Close]

BLAST of Lsi04G006940 vs. TAIR 10
Match: AT2G43720.1 (Eukaryotic protein of unknown function (DUF842) )

HSP 1 Score: 171.8 bits (434), Expect = 4.5e-43
Identity = 84/143 (58.74%), Postives = 115/143 (80.42%), Query Frame = 0


Query: 20  EEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCV 79
           EE++V ER+R+K+NEV+ A+QS L P+QDH+NF+LQ+AYFKCAYECFDR R   EIS C 
Sbjct: 6   EEKMVRERIRKKVNEVSSASQSLLSPVQDHINFTLQKAYFKCAYECFDRTRTHAEISRCA 65

Query: 80  ENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGS--VYDLESCVDAS 139
           E+CSVP+  AQ + +NEM+ FQERLNRSL+VCQDKFE A+ QQKT S  V DLE CV+ +
Sbjct: 66  ESCSVPITNAQNYFDNEMSVFQERLNRSLVVCQDKFEVAK-QQKTRSEAVNDLEHCVNQT 125

Query: 140 IQESLNTLPHLANKLKASFNISN 161
           + E++ TLP+L +++K + +I++
Sbjct: 126 VDEAVKTLPNLVSRMKKALSITD 147

[Close]

BLAST of Lsi04G006940 vs. TAIR 10
Match: AT1G05740.1 (Eukaryotic protein of unknown function (DUF842) )

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-34
Identity = 71/136 (52.21%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 13  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFS-----------LQQAYFKC 72
           M+ +A  EEQ++ ER+R+K+ EVN + QS L PIQ+H++F+           LQQAYFKC
Sbjct: 1   MDRMAVAEEQILLERVRRKIEEVNASGQSQLSPIQEHISFTLLIYAPLIDDELQQAYFKC 60

Query: 73  AYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARL- 132
           + ECF++RRK E  +NCVE C VPV K+QQ  +++MAKFQ+R+NRSLMVCQDKFEAA+L 
Sbjct: 61  SNECFEKRRKPEVTTNCVELCRVPVAKSQQQFDSDMAKFQDRMNRSLMVCQDKFEAAKLL 120

Query: 133 -QQKTGSVYDLESCVD 136
              +  +  D+E CV+
Sbjct: 121 NMNRIDAAKDMEGCVN 136

The following BLAST results are available for this feature:

BLAST of Lsi04G006940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PBU0	2.9e-10	31.90	Protein FAM136A OS=Danio rerio OX=7955 GN=fam136a PE=2 SV=1	[more]
A4QNC6	4.1e-09	32.38	Protein FAM136A OS=Xenopus tropicalis OX=8364 GN=fam136a PE=2 SV=1	[more]
Q96C01	1.6e-08	29.37	Protein FAM136A OS=Homo sapiens OX=9606 GN=FAM136A PE=1 SV=1	[more]
Q2HJI3	2.1e-08	30.91	Protein FAM136A OS=Bos taurus OX=9913 GN=FAM136A PE=2 SV=1	[more]
Q63ZH8	2.7e-08	27.78	Protein FAM136A OS=Xenopus laevis OX=8355 GN=fam136a PE=2 SV=1	[more]

BLAST of Lsi04G006940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV92	3.4e-75	97.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589290 PE=3 SV=1	[more]
A0A5D3CZ60	2.9e-74	97.30	Protein FAM136A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00236...	[more]
A0A1S3BE24	2.9e-74	97.30	protein FAM136A OS=Cucumis melo OX=3656 GN=LOC103488877 PE=3 SV=1	[more]
A0A6J1DE11	9.4e-73	95.21	protein FAM136A OS=Momordica charantia OX=3673 GN=LOC111019665 PE=3 SV=1	[more]
A0A6J1HSM6	4.7e-72	94.59	protein FAM136A-like OS=Cucurbita maxima OX=3661 GN=LOC111466410 PE=3 SV=1	[more]

BLAST of Lsi04G006940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893078.1	1.9e-75	99.32	protein FAM136A-like [Benincasa hispida]	[more]
XP_004135332.1	7.1e-75	97.97	protein FAM136A [Cucumis sativus] >KGN51661.1 hypothetical protein Csa_009350 [C...	[more]
XP_008446025.1	6.0e-74	97.30	PREDICTED: protein FAM136A [Cucumis melo] >KAA0034184.1 protein FAM136A [Cucumis...	[more]
XP_022151759.1	1.9e-72	95.21	protein FAM136A [Momordica charantia]	[more]
XP_022945251.1	9.6e-72	94.59	protein FAM136A-like [Cucurbita moschata] >XP_022966815.1 protein FAM136A-like [...	[more]

BLAST of Lsi04G006940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31725.1	4.5e-59	72.48	Eukaryotic protein of unknown function (DUF842)	[more]
AT1G05730.1	1.8e-55	68.46	Eukaryotic protein of unknown function (DUF842)	[more]
AT2G43720.1	4.5e-43	58.74	Eukaryotic protein of unknown function (DUF842)	[more]
AT1G05740.1	2.2e-34	52.21	Eukaryotic protein of unknown function (DUF842)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008560	Protein of unknown function DUF842, eukaryotic	PFAM	PF05811	DUF842	coord: 32..154 e-value: 1.6E-38 score: 131.3
IPR008560	Protein of unknown function DUF842, eukaryotic	PANTHER	PTHR21096	UNCHARACTERIZED	coord: 13..159
None	No IPR available	PANTHER	PTHR21096:SF5	SUBFAMILY NOT NAMED	coord: 13..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G006940.1	Lsi04G006940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm