Lsi04G006110 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G006110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NDR1/HIN1-like protein 13
Location	chr04: 5604526 .. 5605584 (+)
RNA-Seq Expression	Lsi04G006110
Synteny	Lsi04G006110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGTCCTGAAACCAACCCTCATTTCCGGCGGCCATTGCAGCCTGACCGCCGCCCTCAGCAACCCCCATTACAGCCTCAAGACCCTTCTGATCAGCCACAGCCTGATCCAGACCCATATTCCGAGCCAACCACCCCATGGCCAGCAGCAGAGCAACAACCTACCACTAGTAAGGCACCACGCTTGAAGAAAAATCGCCAAAATCCATATCCACCGCCGCCATCCGACCACCGTGAATCACCGCAGCGCCAACCTCAAGACTCATCTGGAAAAGCACCACGTTTGAAGAAGAAGCAGCAGCATCAAGTTCCATATGCAGAGCCAGGCTTAAAATCACCTGACCAAAATGTGCAGCAATCACGTCCTAGAGTGCAAATTCAAGACCCATCTGATTCTCGAGAGCCTTATCCCCATCGACGGAATAATGTTGACGATAACAACAGAAGAAATCATCAAAACAACATCCTGCTTATGCCTCTACCCCGTCAAACCAATCCATTAATGTGGTTTGGGGCAGTCTTTTGTGCAATCTTTTGGGTACTTGTAATTGTTGGAGGATTAGTAGTCCTGATTGTATACCTCATTTTTCGCCCAAAAAGCCCCTGGTTCGATGTAGCCACTGCCAATCTAAACGCAGCTTATCTCGACATGGGGTATCTGCTAAATGCAGATGTGAATATGCTAGCAAATTTCACAAATCCAAACAAGAAAGTTAGTGTGGATTTCAGCTCAATGATCCTGTATCTTTACTCTGGGAACACACTTATTGCTACCCAATTCATAGCACCTTTCTCAGCATCCAAAGAAGAATCAAAGTTGATTAATATTCATATGGTAACCAGTCAAGTCAGGCTACCAATTTTGGAAAGGCAAAGGCTGCAGAAGCAATTGGAGACGAATGGGATGAAGCTTGAGGTAAAAGGGATTTTCAGGGCCAGGTCTAATTTTGGTACTCTGCTGCGATACTCTTATTGGTTACGTAGTTATTGCAGTTTGATTGTTGGTGGCCCTCCAAGTGGGGTTCTAATGAAAAGTAATTGTAGAACAAAACATTGA

mRNA sequence

ATGAATCGTCCTGAAACCAACCCTCATTTCCGGCGGCCATTGCAGCCTGACCGCCGCCCTCAGCAACCCCCATTACAGCCTCAAGACCCTTCTGATCAGCCACAGCCTGATCCAGACCCATATTCCGAGCCAACCACCCCATGGCCAGCAGCAGAGCAACAACCTACCACTAGTAAGGCACCACGCTTGAAGAAAAATCGCCAAAATCCATATCCACCGCCGCCATCCGACCACCGTGAATCACCGCAGCGCCAACCTCAAGACTCATCTGGAAAAGCACCACGTTTGAAGAAGAAGCAGCAGCATCAAGTTCCATATGCAGAGCCAGGCTTAAAATCACCTGACCAAAATGTGCAGCAATCACGTCCTAGAGTGCAAATTCAAGACCCATCTGATTCTCGAGAGCCTTATCCCCATCGACGGAATAATGTTGACGATAACAACAGAAGAAATCATCAAAACAACATCCTGCTTATGCCTCTACCCCGTCAAACCAATCCATTAATGTGGTTTGGGGCAGTCTTTTGTGCAATCTTTTGGGTACTTGTAATTGTTGGAGGATTAGTAGTCCTGATTGTATACCTCATTTTTCGCCCAAAAAGCCCCTGGTTCGATGTAGCCACTGCCAATCTAAACGCAGCTTATCTCGACATGGGGTATCTGCTAAATGCAGATGTGAATATGCTAGCAAATTTCACAAATCCAAACAAGAAAGTTAGTGTGGATTTCAGCTCAATGATCCTGTATCTTTACTCTGGGAACACACTTATTGCTACCCAATTCATAGCACCTTTCTCAGCATCCAAAGAAGAATCAAAGTTGATTAATATTCATATGGTAACCAGTCAAGTCAGGCTACCAATTTTGGAAAGGCAAAGGCTGCAGAAGCAATTGGAGACGAATGGGATGAAGCTTGAGGTAAAAGGGATTTTCAGGGCCAGGTCTAATTTTGGTACTCTGCTGCGATACTCTTATTGGTTACGTAGTTATTGCAGTTTGATTGTTGGTGGCCCTCCAAGTGGGGTTCTAATGAAAAGTAATTGTAGAACAAAACATTGA

Coding sequence (CDS)

ATGAATCGTCCTGAAACCAACCCTCATTTCCGGCGGCCATTGCAGCCTGACCGCCGCCCTCAGCAACCCCCATTACAGCCTCAAGACCCTTCTGATCAGCCACAGCCTGATCCAGACCCATATTCCGAGCCAACCACCCCATGGCCAGCAGCAGAGCAACAACCTACCACTAGTAAGGCACCACGCTTGAAGAAAAATCGCCAAAATCCATATCCACCGCCGCCATCCGACCACCGTGAATCACCGCAGCGCCAACCTCAAGACTCATCTGGAAAAGCACCACGTTTGAAGAAGAAGCAGCAGCATCAAGTTCCATATGCAGAGCCAGGCTTAAAATCACCTGACCAAAATGTGCAGCAATCACGTCCTAGAGTGCAAATTCAAGACCCATCTGATTCTCGAGAGCCTTATCCCCATCGACGGAATAATGTTGACGATAACAACAGAAGAAATCATCAAAACAACATCCTGCTTATGCCTCTACCCCGTCAAACCAATCCATTAATGTGGTTTGGGGCAGTCTTTTGTGCAATCTTTTGGGTACTTGTAATTGTTGGAGGATTAGTAGTCCTGATTGTATACCTCATTTTTCGCCCAAAAAGCCCCTGGTTCGATGTAGCCACTGCCAATCTAAACGCAGCTTATCTCGACATGGGGTATCTGCTAAATGCAGATGTGAATATGCTAGCAAATTTCACAAATCCAAACAAGAAAGTTAGTGTGGATTTCAGCTCAATGATCCTGTATCTTTACTCTGGGAACACACTTATTGCTACCCAATTCATAGCACCTTTCTCAGCATCCAAAGAAGAATCAAAGTTGATTAATATTCATATGGTAACCAGTCAAGTCAGGCTACCAATTTTGGAAAGGCAAAGGCTGCAGAAGCAATTGGAGACGAATGGGATGAAGCTTGAGGTAAAAGGGATTTTCAGGGCCAGGTCTAATTTTGGTACTCTGCTGCGATACTCTTATTGGTTACGTAGTTATTGCAGTTTGATTGTTGGTGGCCCTCCAAGTGGGGTTCTAATGAAAAGTAATTGTAGAACAAAACATTGA

Protein sequence

MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKAPRLKKNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQNVQQSRPRVQIQDPSDSREPYPHRRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAVFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTNPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRLQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH

Homology

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BLAST of Lsi04G006110 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-07
Identity = 42/172 (24.42%), Postives = 79/172 (45.93%), Query Frame = 0


Query: 188 LVVLIVYLIFRPKSPWFDVATANLNAAYLDMG--YLLNADVNMLANFTNPNKKVSVDFSS 247
           L++ +V+LI  P+ P F +  A++ +  L     +LLN+ V +     NPNKKV + +  
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 248 MILY-LYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRLQKQLETNGMK 307
           +++Y  Y G  + +   + PF  S EE  L+   +  +++ +      ++ ++  T  + 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 308 LEVKGIFRARSNFGTLLRYSYWLRSYCSLIVG------GPPSGVLMKSNCRT 351
           + +K   + R   GT +  +Y     C  IV        PP   L  + C T
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRCST 211

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BLAST of Lsi04G006110 vs. ExPASy TrEMBL
Match: A0A5D3CVW5 (NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001590 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.2e-162
Identity = 307/365 (84.11%), Postives = 329/365 (90.14%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHFRRPLQPDRR QQPPLQPQDPSD PQPDPDPYS+PTTPWP AEQ+PT  KA
Sbjct: 1   MNRPETNPHFRRPLQPDRRSQQPPLQPQDPSDPPQPDPDPYSDPTTPWPVAEQRPTIGKA 60

Query: 61  PRLKKNRQNP-YPP-----PPSDHRESPQRQPQDSSGKAPR------LKKKQQHQVPYAE 120
           PRLKKNRQNP YPP     PPSDHRE  QR PQD  GKAP+       + K+++QVPY E
Sbjct: 61  PRLKKNRQNPSYPPPPTQSPPSDHREQLQRHPQDPYGKAPQDPYGKAPRLKKEYQVPYGE 120

Query: 121 PGLKSPDQNVQQSRPRVQIQDPSDSREPYPHRRNN-VDDNNRRNHQNNILLMPLPRQTNP 180
           P LKSP+QNVQQSRPRVQIQDPSDSREPY HRRN+ VDD+NRRN QNNILLMPLPRQTNP
Sbjct: 121 PNLKSPEQNVQQSRPRVQIQDPSDSREPYRHRRNDVVDDDNRRNQQNNILLMPLPRQTNP 180

Query: 181 LMWFGAVFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVN 240
           LMWFGAVFCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVATANLNAAYLDMGYLLNADVN
Sbjct: 181 LMWFGAVFCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVATANLNAAYLDMGYLLNADVN 240

Query: 241 MLANFTNPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLP 300
           +LANFTNPNKKVSVDFSSMILYLY GNTLIATQFIAPFSA KEES LINIHMV+SQVRLP
Sbjct: 241 LLANFTNPNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLP 300

Query: 301 ILERQRLQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSN 353
           ILERQRLQKQLETNG+KLE+KG+FRARSNFGT+LRYSYW+ +YC L VGGPP+GVL+KSN
Sbjct: 301 ILERQRLQKQLETNGIKLELKGLFRARSNFGTMLRYSYWMHTYCQLFVGGPPTGVLIKSN 360

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BLAST of Lsi04G006110 vs. ExPASy TrEMBL
Match: A0A1S3BF65 (uncharacterized protein LOC103488950 OS=Cucumis melo OX=3656 GN=LOC103488950 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.2e-162
Identity = 307/365 (84.11%), Postives = 329/365 (90.14%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHFRRPLQPDRR QQPPLQPQDPSD PQPDPDPYS+PTTPWP AEQ+PT  KA
Sbjct: 1   MNRPETNPHFRRPLQPDRRSQQPPLQPQDPSDPPQPDPDPYSDPTTPWPVAEQRPTIGKA 60

Query: 61  PRLKKNRQNP-YPP-----PPSDHRESPQRQPQDSSGKAPR------LKKKQQHQVPYAE 120
           PRLKKNRQNP YPP     PPSDHRE  QR PQD  GKAP+       + K+++QVPY E
Sbjct: 61  PRLKKNRQNPSYPPPPTQSPPSDHREQLQRHPQDPYGKAPQDPYGKAPRLKKEYQVPYGE 120

Query: 121 PGLKSPDQNVQQSRPRVQIQDPSDSREPYPHRRNN-VDDNNRRNHQNNILLMPLPRQTNP 180
           P LKSP+QNVQQSRPRVQIQDPSDSREPY HRRN+ VDD+NRRN QNNILLMPLPRQTNP
Sbjct: 121 PNLKSPEQNVQQSRPRVQIQDPSDSREPYRHRRNDVVDDDNRRNQQNNILLMPLPRQTNP 180

Query: 181 LMWFGAVFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVN 240
           LMWFGAVFCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVATANLNAAYLDMGYLLNADVN
Sbjct: 181 LMWFGAVFCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVATANLNAAYLDMGYLLNADVN 240

Query: 241 MLANFTNPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLP 300
           +LANFTNPNKKVSVDFSSMILYLY GNTLIATQFIAPFSA KEES LINIHMV+SQVRLP
Sbjct: 241 LLANFTNPNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLP 300

Query: 301 ILERQRLQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSN 353
           ILERQRLQKQLETNG+KLE+KG+FRARSNFGT+LRYSYW+ +YC L VGGPP+GVL+KSN
Sbjct: 301 ILERQRLQKQLETNGIKLELKGLFRARSNFGTMLRYSYWMHTYCQLFVGGPPTGVLIKSN 360

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BLAST of Lsi04G006110 vs. ExPASy TrEMBL
Match: A0A0A0KQ40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G597480 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.3e-154
Identity = 301/359 (83.84%), Postives = 317/359 (88.30%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHF RPLQPDRR QQPPLQPQD SD PQPDP    EPTTPWP AEQ+PT  KA
Sbjct: 1   MNRPETNPHFWRPLQPDRRSQQPPLQPQDSSDPPQPDP----EPTTPWPVAEQRPTIGKA 60

Query: 61  PRLKKNRQNP-YP-----PPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSP 120
           PRLKKNRQNP YP      PPSDHRE  QRQPQD  GKAPRLKK  +HQVPY  P LKSP
Sbjct: 61  PRLKKNRQNPSYPTPPTQSPPSDHREPLQRQPQDPYGKAPRLKK--EHQVPYGGPSLKSP 120

Query: 121 DQNVQQSRPRVQIQDPSDSREPYPHRRNNVDDN-NRRNHQNNILLMPLPRQTNPLMWFGA 180
           +QNVQQ RPRVQIQDPSDSREPY HRRN+V DN NRRN  N+ILLMPLPRQTNPLMWFGA
Sbjct: 121 EQNVQQPRPRVQIQDPSDSREPYRHRRNDVIDNDNRRNQPNDILLMPLPRQTNPLMWFGA 180

Query: 181 VFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFT 240
           VFCAIFWVLVIVGGLV+LIVYLIFRPKSP FDV+TANLNAAYLDMGYLLNADVN+LANFT
Sbjct: 181 VFCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVSTANLNAAYLDMGYLLNADVNLLANFT 240

Query: 241 NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQR 300
           NPNKKVSVDFSSMILYLY GNTLIATQFIAPFSA KEES LINIHMV+SQVRLPILERQR
Sbjct: 241 NPNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLPILERQR 300

Query: 301 LQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           LQKQLE +G+KLE+KGIFRARSNFGTLLRYSYW+ SYC L VGGPP+GVL+KS C+TKH
Sbjct: 301 LQKQLEISGIKLELKGIFRARSNFGTLLRYSYWMHSYCHLFVGGPPTGVLIKSTCKTKH 353

[Close]

BLAST of Lsi04G006110 vs. ExPASy TrEMBL
Match: A0A6J1HSY4 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111466489 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.8e-135
Identity = 268/358 (74.86%), Postives = 300/358 (83.80%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWP----AAEQQPT 60
           M+ PETNPHF RPLQPDRRPQ     PQDPS  PQP P+PYS+PTTP+P    A+  QP 
Sbjct: 1   MHHPETNPHFHRPLQPDRRPQ----PPQDPSLPPQPHPNPYSDPTTPFPPPSSASSAQPA 60

Query: 61  TSKAPRLKKNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQ 120
           + K PR KKNRQN YPPPP   + S Q Q QD   KAPRLK+   HQ+PYAE   K P+Q
Sbjct: 61  SGKTPRSKKNRQNIYPPPPQSGQGS-QSQTQDPPEKAPRLKR--HHQIPYAEAATKLPEQ 120

Query: 121 NVQQSRPRVQIQDPSDSREPYPH--RRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAV 180
           NV QSRPRVQIQDPSDS+EP+PH  RR++ DD+NRRN Q NIL MPLPRQTNPLMWFGAV
Sbjct: 121 NVHQSRPRVQIQDPSDSQEPHPHHRRRDDGDDHNRRN-QQNILHMPLPRQTNPLMWFGAV 180

Query: 181 FCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTN 240
           FCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVA ANLNAAYLDMGYLLNADVN+LANFTN
Sbjct: 181 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVAAANLNAAYLDMGYLLNADVNLLANFTN 240

Query: 241 PNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRL 300
           PNKKVSVDFSSMIL LY GNTLIAT+FIAPFSASK+ S L+N+HMV+SQVRLPILE  RL
Sbjct: 241 PNKKVSVDFSSMILDLYYGNTLIATRFIAPFSASKQGSHLVNVHMVSSQVRLPILESLRL 300

Query: 301 QKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           QKQ+E NG+KLE++GIFRARSNFG+LLRYSYWL SYC+LI+GGPP GVL++  C+TKH
Sbjct: 301 QKQIENNGIKLELRGIFRARSNFGSLLRYSYWLHSYCTLIIGGPPGGVLLRIKCKTKH 350

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BLAST of Lsi04G006110 vs. ExPASy TrEMBL
Match: A0A6J1G0D4 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111449541 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.8e-135
Identity = 269/358 (75.14%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWP----AAEQQPT 60
           M+ PETNPHF RPLQPDRRP QPPL  QDPS  PQP PDPYS+PTTP+P    A+  QPT
Sbjct: 1   MHHPETNPHFHRPLQPDRRP-QPPL--QDPSLPPQPHPDPYSDPTTPFPPPSSASSAQPT 60

Query: 61  TSKAPRLKKNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQ 120
           + K PR KKNRQN YPPPP   + S Q Q  D   KAPRLK+   HQ+PY E   K P+Q
Sbjct: 61  SGKTPRSKKNRQNIYPPPPQSGQGS-QSQTLDPPEKAPRLKR--HHQIPYPEAATKLPEQ 120

Query: 121 NVQQSRPRVQIQDPSDSREPYPH--RRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAV 180
           NV QSRPRVQIQDPSDS+EP+PH  RR++ DD+NRRN Q NILLMPLPRQTNPLMWFGAV
Sbjct: 121 NVHQSRPRVQIQDPSDSQEPHPHHRRRDDGDDHNRRN-QQNILLMPLPRQTNPLMWFGAV 180

Query: 181 FCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTN 240
           FCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVA ANLNAAYLDMGYLLNAD+N+LANFTN
Sbjct: 181 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVAAANLNAAYLDMGYLLNADMNLLANFTN 240

Query: 241 PNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRL 300
           PNKKVSVDFSSMIL LY GNTLIAT+FIAPFSASK+ S L+N+HM +SQVRLPILE  RL
Sbjct: 241 PNKKVSVDFSSMILDLYYGNTLIATRFIAPFSASKQGSHLVNVHMTSSQVRLPILESLRL 300

Query: 301 QKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           QKQ+E NG+KLE++GIFRARSNFG+LLRYSYWL SYC+LI+GGPP GVL++  C+TKH
Sbjct: 301 QKQIENNGIKLELRGIFRARSNFGSLLRYSYWLHSYCTLIIGGPPGGVLLRIKCKTKH 351

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BLAST of Lsi04G006110 vs. NCBI nr
Match: XP_038892121.1 (uncharacterized protein LOC120081374 [Benincasa hispida])

HSP 1 Score: 597.4 bits (1539), Expect = 7.8e-167
Identity = 315/359 (87.74%), Postives = 329/359 (91.64%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHFRRPLQPDRRPQQ PLQPQDP+D PQPDPDPYSEPTTPWPAAEQ+PTT KA
Sbjct: 1   MNRPETNPHFRRPLQPDRRPQQAPLQPQDPADPPQPDPDPYSEPTTPWPAAEQRPTTGKA 60

Query: 61  PRLKKNRQNPYPPPP------SDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSP 120
           PRLKKNRQNPYPPPP      SDHRE PQRQPQD SGKAPRLKKKQQHQVPY EPGLKSP
Sbjct: 61  PRLKKNRQNPYPPPPTQSPPRSDHREPPQRQPQDLSGKAPRLKKKQQHQVPYVEPGLKSP 120

Query: 121 DQNVQQSRPRVQIQDPSDSREPYPHRRNN-VDDNNRRNHQNNILLMPLPRQTNPLMWFGA 180
           DQNVQQSRPRVQIQDPSD R+    RRN+ VDDNNRRN  NN+L MPLPRQTNP MWFGA
Sbjct: 121 DQNVQQSRPRVQIQDPSDFRD----RRNDVVDDNNRRNQPNNMLHMPLPRQTNPFMWFGA 180

Query: 181 VFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFT 240
           VFCAIFWVLVIVGGLVVLIVYLIFRPKSP FD++TANLNAAYLDMGYLLNADVN+LANFT
Sbjct: 181 VFCAIFWVLVIVGGLVVLIVYLIFRPKSPRFDISTANLNAAYLDMGYLLNADVNLLANFT 240

Query: 241 NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQR 300
           NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSA KEES LINIHMVTSQVRLPILERQR
Sbjct: 241 NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSAYKEESMLINIHMVTSQVRLPILERQR 300

Query: 301 LQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           LQKQLETNG++L++KGIFRARSNFGTLLRYSYWLR  C LI GGPP GVL++SNCRTKH
Sbjct: 301 LQKQLETNGIQLDLKGIFRARSNFGTLLRYSYWLRGDCKLIFGGPPGGVLIRSNCRTKH 355

[Close]

BLAST of Lsi04G006110 vs. NCBI nr
Match: XP_008446136.1 (PREDICTED: uncharacterized protein LOC103488950 [Cucumis melo] >KAA0034259.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa] >TYK15662.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 581.6 bits (1498), Expect = 4.4e-162
Identity = 307/365 (84.11%), Postives = 329/365 (90.14%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHFRRPLQPDRR QQPPLQPQDPSD PQPDPDPYS+PTTPWP AEQ+PT  KA
Sbjct: 1   MNRPETNPHFRRPLQPDRRSQQPPLQPQDPSDPPQPDPDPYSDPTTPWPVAEQRPTIGKA 60

Query: 61  PRLKKNRQNP-YPP-----PPSDHRESPQRQPQDSSGKAPR------LKKKQQHQVPYAE 120
           PRLKKNRQNP YPP     PPSDHRE  QR PQD  GKAP+       + K+++QVPY E
Sbjct: 61  PRLKKNRQNPSYPPPPTQSPPSDHREQLQRHPQDPYGKAPQDPYGKAPRLKKEYQVPYGE 120

Query: 121 PGLKSPDQNVQQSRPRVQIQDPSDSREPYPHRRNN-VDDNNRRNHQNNILLMPLPRQTNP 180
           P LKSP+QNVQQSRPRVQIQDPSDSREPY HRRN+ VDD+NRRN QNNILLMPLPRQTNP
Sbjct: 121 PNLKSPEQNVQQSRPRVQIQDPSDSREPYRHRRNDVVDDDNRRNQQNNILLMPLPRQTNP 180

Query: 181 LMWFGAVFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVN 240
           LMWFGAVFCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVATANLNAAYLDMGYLLNADVN
Sbjct: 181 LMWFGAVFCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVATANLNAAYLDMGYLLNADVN 240

Query: 241 MLANFTNPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLP 300
           +LANFTNPNKKVSVDFSSMILYLY GNTLIATQFIAPFSA KEES LINIHMV+SQVRLP
Sbjct: 241 LLANFTNPNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLP 300

Query: 301 ILERQRLQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSN 353
           ILERQRLQKQLETNG+KLE+KG+FRARSNFGT+LRYSYW+ +YC L VGGPP+GVL+KSN
Sbjct: 301 ILERQRLQKQLETNGIKLELKGLFRARSNFGTMLRYSYWMHTYCQLFVGGPPTGVLIKSN 360

[Close]

BLAST of Lsi04G006110 vs. NCBI nr
Match: XP_004135493.1 (pistil-specific extensin-like protein [Cucumis sativus] >KGN51738.1 hypothetical protein Csa_008987 [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 2.6e-154
Identity = 301/359 (83.84%), Postives = 317/359 (88.30%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKA 60
           MNRPETNPHF RPLQPDRR QQPPLQPQD SD PQPDP    EPTTPWP AEQ+PT  KA
Sbjct: 1   MNRPETNPHFWRPLQPDRRSQQPPLQPQDSSDPPQPDP----EPTTPWPVAEQRPTIGKA 60

Query: 61  PRLKKNRQNP-YP-----PPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSP 120
           PRLKKNRQNP YP      PPSDHRE  QRQPQD  GKAPRLKK  +HQVPY  P LKSP
Sbjct: 61  PRLKKNRQNPSYPTPPTQSPPSDHREPLQRQPQDPYGKAPRLKK--EHQVPYGGPSLKSP 120

Query: 121 DQNVQQSRPRVQIQDPSDSREPYPHRRNNVDDN-NRRNHQNNILLMPLPRQTNPLMWFGA 180
           +QNVQQ RPRVQIQDPSDSREPY HRRN+V DN NRRN  N+ILLMPLPRQTNPLMWFGA
Sbjct: 121 EQNVQQPRPRVQIQDPSDSREPYRHRRNDVIDNDNRRNQPNDILLMPLPRQTNPLMWFGA 180

Query: 181 VFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFT 240
           VFCAIFWVLVIVGGLV+LIVYLIFRPKSP FDV+TANLNAAYLDMGYLLNADVN+LANFT
Sbjct: 181 VFCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVSTANLNAAYLDMGYLLNADVNLLANFT 240

Query: 241 NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQR 300
           NPNKKVSVDFSSMILYLY GNTLIATQFIAPFSA KEES LINIHMV+SQVRLPILERQR
Sbjct: 241 NPNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLPILERQR 300

Query: 301 LQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           LQKQLE +G+KLE+KGIFRARSNFGTLLRYSYW+ SYC L VGGPP+GVL+KS C+TKH
Sbjct: 301 LQKQLEISGIKLELKGIFRARSNFGTLLRYSYWMHSYCHLFVGGPPTGVLIKSTCKTKH 353

[Close]

BLAST of Lsi04G006110 vs. NCBI nr
Match: XP_022966925.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 491.1 bits (1263), Expect = 7.9e-135
Identity = 268/358 (74.86%), Postives = 300/358 (83.80%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWP----AAEQQPT 60
           M+ PETNPHF RPLQPDRRPQ     PQDPS  PQP P+PYS+PTTP+P    A+  QP 
Sbjct: 1   MHHPETNPHFHRPLQPDRRPQ----PPQDPSLPPQPHPNPYSDPTTPFPPPSSASSAQPA 60

Query: 61  TSKAPRLKKNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQ 120
           + K PR KKNRQN YPPPP   + S Q Q QD   KAPRLK+   HQ+PYAE   K P+Q
Sbjct: 61  SGKTPRSKKNRQNIYPPPPQSGQGS-QSQTQDPPEKAPRLKR--HHQIPYAEAATKLPEQ 120

Query: 121 NVQQSRPRVQIQDPSDSREPYPH--RRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAV 180
           NV QSRPRVQIQDPSDS+EP+PH  RR++ DD+NRRN Q NIL MPLPRQTNPLMWFGAV
Sbjct: 121 NVHQSRPRVQIQDPSDSQEPHPHHRRRDDGDDHNRRN-QQNILHMPLPRQTNPLMWFGAV 180

Query: 181 FCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTN 240
           FCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVA ANLNAAYLDMGYLLNADVN+LANFTN
Sbjct: 181 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVAAANLNAAYLDMGYLLNADVNLLANFTN 240

Query: 241 PNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRL 300
           PNKKVSVDFSSMIL LY GNTLIAT+FIAPFSASK+ S L+N+HMV+SQVRLPILE  RL
Sbjct: 241 PNKKVSVDFSSMILDLYYGNTLIATRFIAPFSASKQGSHLVNVHMVSSQVRLPILESLRL 300

Query: 301 QKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           QKQ+E NG+KLE++GIFRARSNFG+LLRYSYWL SYC+LI+GGPP GVL++  C+TKH
Sbjct: 301 QKQIENNGIKLELRGIFRARSNFGSLLRYSYWLHSYCTLIIGGPPGGVLLRIKCKTKH 350

[Close]

BLAST of Lsi04G006110 vs. NCBI nr
Match: XP_022945240.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 7.9e-135
Identity = 269/358 (75.14%), Postives = 301/358 (84.08%), Query Frame = 0


Query: 1   MNRPETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWP----AAEQQPT 60
           M+ PETNPHF RPLQPDRRP QPPL  QDPS  PQP PDPYS+PTTP+P    A+  QPT
Sbjct: 1   MHHPETNPHFHRPLQPDRRP-QPPL--QDPSLPPQPHPDPYSDPTTPFPPPSSASSAQPT 60

Query: 61  TSKAPRLKKNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQ 120
           + K PR KKNRQN YPPPP   + S Q Q  D   KAPRLK+   HQ+PY E   K P+Q
Sbjct: 61  SGKTPRSKKNRQNIYPPPPQSGQGS-QSQTLDPPEKAPRLKR--HHQIPYPEAATKLPEQ 120

Query: 121 NVQQSRPRVQIQDPSDSREPYPH--RRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAV 180
           NV QSRPRVQIQDPSDS+EP+PH  RR++ DD+NRRN Q NILLMPLPRQTNPLMWFGAV
Sbjct: 121 NVHQSRPRVQIQDPSDSQEPHPHHRRRDDGDDHNRRN-QQNILLMPLPRQTNPLMWFGAV 180

Query: 181 FCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTN 240
           FCAIFWVLVIVGGLV+LIVYLIFRPKSP FDVA ANLNAAYLDMGYLLNAD+N+LANFTN
Sbjct: 181 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVAAANLNAAYLDMGYLLNADMNLLANFTN 240

Query: 241 PNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRL 300
           PNKKVSVDFSSMIL LY GNTLIAT+FIAPFSASK+ S L+N+HM +SQVRLPILE  RL
Sbjct: 241 PNKKVSVDFSSMILDLYYGNTLIATRFIAPFSASKQGSHLVNVHMTSSQVRLPILESLRL 300

Query: 301 QKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTKH 353
           QKQ+E NG+KLE++GIFRARSNFG+LLRYSYWL SYC+LI+GGPP GVL++  C+TKH
Sbjct: 301 QKQIENNGIKLELRGIFRARSNFGSLLRYSYWLHSYCTLIIGGPPGGVLLRIKCKTKH 351

[Close]

BLAST of Lsi04G006110 vs. TAIR 10
Match: AT3G26350.1 (LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6; Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162; Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink). )

HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51
Identity = 144/362 (39.78%), Postives = 201/362 (55.52%), Query Frame = 0


Query: 5   ETNPHFRR-PLQPDRRPQQPPLQPQDPSDQPQPDPDP-----YSEPTTPWPAAEQQPTTS 64
           ETNPHF R P Q            Q  S+QP   P P     + + T P P A       
Sbjct: 8   ETNPHFARIPSQNPHLKSGGASTSQTSSNQPHIPPIPHPKKSHHKTTQPHPVAPPGILIK 67

Query: 65  KAPRLKKN-----RQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKS 124
              R ++N     + +  P P S     P R+ Q+SS K P L   + +Q     P  ++
Sbjct: 68  TRGRHRENPIQEPKHSVIPVPLSPEERLPPRKTQNSS-KRPLLLSPEDNQ-QQRPPPPQA 127

Query: 125 PDQN---VQQSRPRVQIQDP-SDSREPYPHRRNNVDDNNRRNHQNNILLMPLPRQTNPLM 184
           P +N      + P +    P   +  P PH            H+    L P  R+TN + 
Sbjct: 128 PQRNGGGYGSTLPPIPKPSPWRTAPTPSPH------------HRRGPRLPPPSRETNAMT 187

Query: 185 WFGAVFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNML 244
           W  A  CAIFWV++I+GGL++LIVYL++RP+SP+ D++ ANLNAAYLDMG+LLN D+ +L
Sbjct: 188 WSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLLNGDLTIL 247

Query: 245 ANFTNPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPIL 304
           AN TNP+KK SV+FS +   LY  NTLIATQ+I PF   K+ S   N+H+V+SQV+L   
Sbjct: 248 ANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSSQVQLQAT 307

Query: 305 ERQRLQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCR 352
           + + LQ+Q+ET  + L ++G+F ARS+ G L RYSY L ++CS+ + GPP G +    C 
Sbjct: 308 QSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLGAMRARRCN 355

[Close]

BLAST of Lsi04G006110 vs. TAIR 10
Match: AT1G13050.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 260 Blast hits to 259 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 4.7e-45
Identity = 87/178 (48.88%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 174 VFCAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFT 233
           + CAI  +++I+ GL++L+VYL  RP+SP+FD++ A LN A LDMGY+LN D+ ++ NFT
Sbjct: 7   ICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVNFT 66

Query: 234 NPNKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQR 293
           NP+KK SVDFS ++  LY  NTLIAT+ I PF   K  S   + H+V+SQV++ +++ Q 
Sbjct: 67  NPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQSQD 126

Query: 294 LQKQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTK 352
           LQ QL T  + L ++G F ARSN G+L+RYSYWL + CS+ +  PP+G +    C TK
Sbjct: 127 LQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGTMRARRCNTK 184

[Close]

BLAST of Lsi04G006110 vs. TAIR 10
Match: AT1G13050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). )

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-41
Identity = 126/348 (36.21%), Postives = 179/348 (51.44%), Query Frame = 0


Query: 5   ETNPHFRRPLQPDRRPQQPPLQPQDPSDQPQPDPDPYSEPTTPWPAAEQQPTTSKAPRLK 64
           ETNPHF                    S Q Q    P S   +P      Q  +   PR+K
Sbjct: 7   ETNPHF-----------------VQFSLQDQHQGGPSSSWNSPHHHQIPQAHSVAPPRVK 66

Query: 65  -KNRQNPYPPPPSDHRESPQRQPQDSSGKAPRLKKKQQHQVPYAEPGLKSPDQNVQQSRP 124
            K R      PP    ESP  +P         L  + +  +P        P  N   +RP
Sbjct: 67  IKTRGRHQTEPPETIHESPSSRP---------LPLRPEEPLP--------PRHNPNSARP 126

Query: 125 RVQIQDPSDSREPYPHRRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAVFCAIFWVLV 184
              +Q   + + P PHR    +    R           P++T P+     + CAI  +++
Sbjct: 127 ---LQLSPEEQRP-PHRGYGSEPTPWRRAPTRPAYQQGPKRTKPMTLPATICCAILLIVL 186

Query: 185 IVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTNPNKKVSVDF 244
           I+ GL++L+VYL  RP+SP+FD++ A LN A LDMGY+LN D+ ++ NFTNP+KK SVDF
Sbjct: 187 ILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVLNGDLAVVVNFTNPSKKSSVDF 246

Query: 245 SSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRLQKQLETNGM 304
           S ++  LY  NTLIAT+ I PF   K  S   + H+V+SQV++ +++ Q LQ QL T  +
Sbjct: 247 SYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQSQDLQLQLGTGPV 306

Query: 305 KLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTK 352
            L ++G F ARSN G+L+RYSYWL + CS+ +  PP+G +    C TK
Sbjct: 307 LLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGTMRARRCNTK 316

[Close]

BLAST of Lsi04G006110 vs. TAIR 10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-35
Identity = 101/283 (35.69%), Postives = 151/283 (53.36%), Query Frame = 0


Query: 70  PYPPPPSDHRESPQRQPQDS-SGKAPRLKKKQQHQVPYAEPGLKSPDQNVQQSRPRVQIQ 129
           P+ PPP      PQ QP ++ S + P          P+  P          QS P  Q+ 
Sbjct: 5   PHLPPP------PQLQPPETPSWETPSSVWYTPRTTPWRTP-------QSTQSTPVGQMV 64

Query: 130 DPSDSREPYPHRRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAVFCAIFWVLVIVGGL 189
                 +P   R N +D   R++    IL  P   +T+  +W  A FC +F +L+I   +
Sbjct: 65  ----LTKPATVRFNGLDAEPRKDRV--ILRQPRSSRTSLWIWCVAGFCFVFSLLLIFFAI 124

Query: 190 VVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTNPNKKVSVDFSSMIL 249
             LIV+L  RP+ P FD+  ANL+  Y D     N D++ML NFTNPNKK+ V F  + +
Sbjct: 125 ATLIVFLAIRPRIPVFDIPNANLHTIYFDTPEFFNGDLSMLVNFTNPNKKIEVKFEKLRI 184

Query: 250 YLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRLQKQLETNGMKLEVK 309
            L+  N LIA Q + PF   K E++L  I +++S V LP+     L++QLE N ++ E++
Sbjct: 185 ELFFFNRLIAAQVVQPFLQKKHETRLEPIRLISSLVGLPVNHAVELRRQLENNKIEYEIR 244

Query: 310 GIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTK 352
           G F+ +++FG ++ YSY L   C L + GPP+G+L+  NC TK
Sbjct: 245 GTFKVKAHFG-MIHYSYQLHGRCQLQMTGPPTGILISRNCTTK 267

[Close]

BLAST of Lsi04G006110 vs. TAIR 10
Match: AT5G56050.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G26490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 3.0e-31
Identity = 94/296 (31.76%), Postives = 152/296 (51.35%), Query Frame = 0


Query: 71  YPPPPSDHRESPQRQPQDSSGK------------APRLKKKQQHQVPYAEPGL---KSPD 130
           + PPP    + P+  P ++                PR  +      P A   +   KSP 
Sbjct: 4   FSPPPQSQPQPPETPPWETPSSKWYSPIYTPWRTTPRSTQSTPTTTPIALTEVIVSKSPL 63

Query: 131 QNVQQSRPRVQIQDPSDSREPYPHRRNNVDDNNRRNHQNNILLMPLPRQTNPLMWFGAVF 190
            N Q+S    ++    DS E +P             H+  +LL     +TNP +W GA  
Sbjct: 64  SN-QKSPATPKL----DSMEAHP------------LHETMVLLQLRTSRTNPWIWCGAAL 123

Query: 191 CAIFWVLVIVGGLVVLIVYLIFRPKSPWFDVATANLNAAYLDMGYLLNADVNMLANFTNP 250
           C IF +L+IV G+  LI+YL  +P++P FD++ A LN    +     N D+ +  NFTNP
Sbjct: 124 CFIFSILLIVFGIATLILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNP 183

Query: 251 NKKVSVDFSSMILYLYSGNTLIATQFIAPFSASKEESKLINIHMVTSQVRLPILERQRLQ 310
           NKK++V F ++++ L+  +T IATQ + PFS    +++L  I ++++ V LP+     L+
Sbjct: 184 NKKLNVRFENLMVELWFADTKIATQGVLPFSQRNGKTRLEPIRLISNLVFLPVNHILELR 243

Query: 311 KQLETNGMKLEVKGIFRARSNFGTLLRYSYWLRSYCSLIVGGPPSGVLMKSNCRTK 352
           +Q+ +N +  E++  FR ++ FG ++ YSY L   C L +  PP+G L+  NC TK
Sbjct: 244 RQVTSNRIAYEIRSNFRVKAIFG-MIHYSYMLHGICQLQLSSPPAGGLVYRNCTTK 281

The following BLAST results are available for this feature:

BLAST of Lsi04G006110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FI03	3.8e-07	24.42	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of Lsi04G006110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVW5	2.2e-162	84.11	NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BF65	2.2e-162	84.11	uncharacterized protein LOC103488950 OS=Cucumis melo OX=3656 GN=LOC103488950 PE=...	[more]
A0A0A0KQ40	1.3e-154	83.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G597480 PE=4 SV=1	[more]
A0A6J1HSY4	3.8e-135	74.86	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111466489 PE=4 SV=1	[more]
A0A6J1G0D4	3.8e-135	75.14	NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111449541 PE=4 SV=...	[more]

BLAST of Lsi04G006110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892121.1	7.8e-167	87.74	uncharacterized protein LOC120081374 [Benincasa hispida]	[more]
XP_008446136.1	4.4e-162	84.11	PREDICTED: uncharacterized protein LOC103488950 [Cucumis melo] >KAA0034259.1 NDR...	[more]
XP_004135493.1	2.6e-154	83.84	pistil-specific extensin-like protein [Cucumis sativus] >KGN51738.1 hypothetical...	[more]
XP_022966925.1	7.9e-135	74.86	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]
XP_022945240.1	7.9e-135	75.14	NDR1/HIN1-like protein 13 [Cucurbita moschata]	[more]

BLAST of Lsi04G006110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26350.1	1.5e-51	39.78	LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel, carpel, stamen; EXPRESSED ...	[more]
AT1G13050.2	4.7e-45	48.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13050.1	1.1e-41	36.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G26490.1	3.4e-35	35.69	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G56050.1	3.0e-31	31.76	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..95
None	No IPR available	PANTHER	PTHR31852:SF130	PROLINE-RICH RECEPTOR-LIKE KINASE	coord: 96..352
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 96..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G006110.1	Lsi04G006110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane