Lsi04G005640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G005640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box/kelch-repeat protein
Location	chr04: 5147348 .. 5148466 (+)
RNA-Seq Expression	Lsi04G005640
Synteny	Lsi04G005640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACGGAAGAGACGGCGAATGAGCAAGGCGGCGGCGCCGCCCACGGCGACATTTTGGAGTCCATTCTCTCCCACGTCCCTCTCATCGATCTGGCTTCCTCCTCCTGCGTTTCACGTGGCTGGGAACGCGCCGTTTTATCCTCTCTCTCCCATTCCAACGCCCTCAAACCATGGCTCCTCCTCCACTCTCCTTCCGCCGCCGCTTACGACCCCCGTTCCGCCGTATGGATGGACATCAACTACCGCCCTCCGATCACACCCGCCGCCCCCCTCCGTTCTTCTCACTCCACTTTACTTTACACACTTACCCCCTCCAAATTCTCTTTCTCAATCGACCCCCTCCACCTGACGTGGCAGCACGTGGATCCCCCGCTGACGTGGCGGACCGATCCAATCGTTGCCCTTGTTGCCAACAGAGCCGTCGTCGTCGCCGGCACGTGCGACTTAGTCGACGAACATCCGGCCGTTGAAATTTACGACTTGGAGTCAAAAACGTGGAGCACGTGCGATGAACTGCCATCAGTCTTCGCCGAATATGCGACCGCCACATGGTTTTCAGTTGCTGTTGACGACGATCAATTACATGTCATGCATAAAAATTCGGGGACGATATTTTCCTTCGACCCGATAAATATATCGTGGTCCGGGCCGTACGAAGTAAAACCCGAACCGGACGTGTTTTCTTCTATTATTGGATTTGCCGGCGGCGGAATGGTGGTTGTGGGACTAAAGGGATCGCCGGAGGATGTTAAAAGCGTGAAGATATATAACGTGGTAGTTCAATTTTCTGAATGGCAGGAAATTGGGGAAATGCCTAAGTCGTTGGTTGAGAAATTGCAGGGAGAGAGTGCAGAAATGGCGTCGATAGGATTGTCGTCGGCGGGAGATTTCATATTCCTCCACCATGGTTCCGACCCAGTGGAGGTGATACAGTGCGAGGTGGTCGACAGCGGTTGTAGGTGGGGAATCGTACCAAATACGGTGGTGGATGACCGGACCCGGCTCCGGCGGTTGGTGTTCACCAGTTCCAATGTGGGCATCCGAGATTTGAAGAAAGCATTAAGATTGGAAAGCCCACGAATCACCATCAAGATTAAGGATTCTGACGGGGACTGA

mRNA sequence

ATGTCTACGGAAGAGACGGCGAATGAGCAAGGCGGCGGCGCCGCCCACGGCGACATTTTGGAGTCCATTCTCTCCCACGTCCCTCTCATCGATCTGGCTTCCTCCTCCTGCGTTTCACGTGGCTGGGAACGCGCCGTTTTATCCTCTCTCTCCCATTCCAACGCCCTCAAACCATGGCTCCTCCTCCACTCTCCTTCCGCCGCCGCTTACGACCCCCGTTCCGCCGTATGGATGGACATCAACTACCGCCCTCCGATCACACCCGCCGCCCCCCTCCGTTCTTCTCACTCCACTTTACTTTACACACTTACCCCCTCCAAATTCTCTTTCTCAATCGACCCCCTCCACCTGACGTGGCAGCACGTGGATCCCCCGCTGACGTGGCGGACCGATCCAATCGTTGCCCTTGTTGCCAACAGAGCCGTCGTCGTCGCCGGCACGTGCGACTTAGTCGACGAACATCCGGCCGTTGAAATTTACGACTTGGAGTCAAAAACGTGGAGCACGTGCGATGAACTGCCATCAGTCTTCGCCGAATATGCGACCGCCACATGGTTTTCAGTTGCTGTTGACGACGATCAATTACATGTCATGCATAAAAATTCGGGGACGATATTTTCCTTCGACCCGATAAATATATCGTGGTCCGGGCCGTACGAAGTAAAACCCGAACCGGACGTGTTTTCTTCTATTATTGGATTTGCCGGCGGCGGAATGGTGGTTGTGGGACTAAAGGGATCGCCGGAGGATGTTAAAAGCGTGAAGATATATAACGTGGTAGTTCAATTTTCTGAATGGCAGGAAATTGGGGAAATGCCTAAGTCGTTGGTTGAGAAATTGCAGGGAGAGAGTGCAGAAATGGCGTCGATAGGATTGTCGTCGGCGGGAGATTTCATATTCCTCCACCATGGTTCCGACCCAGTGGAGGTGATACAGTGCGAGGTGGTCGACAGCGGTTGTAGGTGGGGAATCGTACCAAATACGGTGGTGGATGACCGGACCCGGCTCCGGCGGTTGGTGTTCACCAGTTCCAATGTGGGCATCCGAGATTTGAAGAAAGCATTAAGATTGGAAAGCCCACGAATCACCATCAAGATTAAGGATTCTGACGGGGACTGA

Coding sequence (CDS)

ATGTCTACGGAAGAGACGGCGAATGAGCAAGGCGGCGGCGCCGCCCACGGCGACATTTTGGAGTCCATTCTCTCCCACGTCCCTCTCATCGATCTGGCTTCCTCCTCCTGCGTTTCACGTGGCTGGGAACGCGCCGTTTTATCCTCTCTCTCCCATTCCAACGCCCTCAAACCATGGCTCCTCCTCCACTCTCCTTCCGCCGCCGCTTACGACCCCCGTTCCGCCGTATGGATGGACATCAACTACCGCCCTCCGATCACACCCGCCGCCCCCCTCCGTTCTTCTCACTCCACTTTACTTTACACACTTACCCCCTCCAAATTCTCTTTCTCAATCGACCCCCTCCACCTGACGTGGCAGCACGTGGATCCCCCGCTGACGTGGCGGACCGATCCAATCGTTGCCCTTGTTGCCAACAGAGCCGTCGTCGTCGCCGGCACGTGCGACTTAGTCGACGAACATCCGGCCGTTGAAATTTACGACTTGGAGTCAAAAACGTGGAGCACGTGCGATGAACTGCCATCAGTCTTCGCCGAATATGCGACCGCCACATGGTTTTCAGTTGCTGTTGACGACGATCAATTACATGTCATGCATAAAAATTCGGGGACGATATTTTCCTTCGACCCGATAAATATATCGTGGTCCGGGCCGTACGAAGTAAAACCCGAACCGGACGTGTTTTCTTCTATTATTGGATTTGCCGGCGGCGGAATGGTGGTTGTGGGACTAAAGGGATCGCCGGAGGATGTTAAAAGCGTGAAGATATATAACGTGGTAGTTCAATTTTCTGAATGGCAGGAAATTGGGGAAATGCCTAAGTCGTTGGTTGAGAAATTGCAGGGAGAGAGTGCAGAAATGGCGTCGATAGGATTGTCGTCGGCGGGAGATTTCATATTCCTCCACCATGGTTCCGACCCAGTGGAGGTGATACAGTGCGAGGTGGTCGACAGCGGTTGTAGGTGGGGAATCGTACCAAATACGGTGGTGGATGACCGGACCCGGCTCCGGCGGTTGGTGTTCACCAGTTCCAATGTGGGCATCCGAGATTTGAAGAAAGCATTAAGATTGGAAAGCCCACGAATCACCATCAAGATTAAGGATTCTGACGGGGACTGA

Protein sequence

MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWLLLHSPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPLHLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSVFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAGGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSAGDFIFLHHGSDPVEVIQCEVVDSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLKKALRLESPRITIKIKDSDGD

Homology

[Close]

BLAST of Lsi04G005640 vs. ExPASy Swiss-Prot
Match: Q9LDE3 (F-box/kelch-repeat protein At1g23390 OS=Arabidopsis thaliana OX=3702 GN=At1g23390 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-64
Identity = 139/383 (36.29%), Postives = 218/383 (56.92%), Query Frame = 0


Query: 4   EETANEQGGG-------AAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNAL 63
           E+  N   GG       +  GDILESILS++PL+DL S+  VS+ W RAV  SL     +
Sbjct: 2   EKKKNNNNGGDFGEEESSIDGDILESILSYLPLLDLDSACQVSKSWNRAVFYSLRRLKTM 61

Query: 64  KPWLLLH----------SPSAAAYDPRSAVWMDIN-YRPPITPAAPLRSSHSTLLYTLTP 123
            PWL ++          +  A AYDP+S  W+++N    P+   +  RSSHSTLLY L+P
Sbjct: 62  -PWLFVYNQRNSPPYTMATMAMAYDPKSEAWIELNTASSPVEHVSVARSSHSTLLYALSP 121

Query: 124 SKFSFSIDPLHLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLES- 183
           ++FSFS D  HLTWQHV PP  WR DPIVA+V    ++  G CD  ++  AVE++D+ES 
Sbjct: 122 ARFSFSTDAFHLTWQHVAPPRVWRIDPIVAVVGRSLIIAGGVCDFEEDRFAVELFDIESG 181

Query: 184 -KTWSTCDELPSVFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKP 243
              W  C+ +P    E A++TW SVAV  ++++V  K SG   SF+P+  SW+   ++ P
Sbjct: 182 DGAWERCESMPDFLYESASSTWLSVAVSSEKMYVTEKRSGVTCSFNPVTRSWTKLLDLCP 241

Query: 244 -EPDVFSSIIGFAGGGMVVVGLKGSPEDVKSVKIYNVV---VQFSEWQEIGEMPKSLVEK 303
            E  ++S  IGF+   +++ G+ G   +   ++++ V+       +++ IG MP++ +EK
Sbjct: 242 GECSLYSRSIGFSVNRLIMAGIIGDEYNPTGIELWEVIDSDESHLKFESIGSMPETYLEK 301

Query: 304 LQGESAE--MASIGLSSAGDFIFLHHGSDPVEVIQCEVVDSG--CRWGIVPNTVVDDRT- 357
           L+G +++  + SI L++ GD +++H  ++    I    ++ G  C+W  +PN     +  
Sbjct: 302 LRGINSDWPLTSIVLNAVGDMVYVHGAAENGGEIVAAEIEGGKLCKWRTLPNADATWKKS 361

[Close]

BLAST of Lsi04G005640 vs. ExPASy Swiss-Prot
Match: Q3EB08 (F-box/kelch-repeat protein At3g24760 OS=Arabidopsis thaliana OX=3702 GN=At3g24760 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 92/363 (25.34%), Postives = 163/363 (44.90%), Query Frame = 0


Query: 18  DILESILSHVPLIDLASSSCVSRGWERAVLS---SLSHSNALKPWLLL---HSPS----- 77
           D+ ESIL H+P+  L   + VS+ W   + S   S S S +  PWL L   H+ S     
Sbjct: 19  DVTESILYHLPIPSLVRFTLVSKQWRSLITSLPPSPSPSPSSPPWLFLFGIHNTSSFHNQ 78

Query: 78  AAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPLHLTWQHVDPPL 137
           + A+DP S  W+ +   PP + ++      +  L+T  P +FSFS   L   W+   P  
Sbjct: 79  SFAFDPLSNTWLRL---PPSSSSSDHLVGSNRFLFTTAP-RFSFS-PILKPNWRFTSPVR 138

Query: 138 TWRTDPIVALV-----ANRAVVVAGTCDL-----VDEHPAVEIYDLESKTWSTCDELPSV 197
             R +P++ +      +++ ++V G+  +     ++E  AV+IYD    +W  C  LP+ 
Sbjct: 139 FPRINPLLTVFTTLSNSSKLILVGGSSRIGGLVDIEERLAVQIYDPVLDSWELCSPLPAD 198

Query: 198 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 257
           F         + A+   + +V    S  I SF   + +WS    +KP P +  + +    
Sbjct: 199 FRSGQDHQTLTSALFKRRFYVFDNYSCFISSFCLDSYTWSDVQTLKP-PGLSFAYLNSCN 258

Query: 258 GGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKL---QGESAEMASIGLS 317
           G +V+ G+ G      S  ++++     E+ EI  MP+ L+  L     E  +  S+  +
Sbjct: 259 GMLVLGGMCGF-----SFNLWSIEEGSMEFSEIAVMPEDLLFGLVDSDDEDDKFRSLKCA 318

Query: 318 SAGDFIFLH----HGSDPVEVIQCEVVDSG-CRWGIVPNTVVDDRTRLRRLVFTSSNVGI 352
            +G+ +++     H   P  V +    ++G C W  VP  +     +  ++V   S V I
Sbjct: 319 GSGNLVYVFNDDCHKKFPACVCEIGGGENGICSWRRVP-CLPSPVNKFHKVVSFCSTVSI 369

[Close]

BLAST of Lsi04G005640 vs. ExPASy Swiss-Prot
Match: Q08CL3 (Kelch repeat and BTB domain-containing protein 8 OS=Danio rerio OX=7955 GN=kbtbd8 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04
Identity = 37/136 (27.21%), Postives = 55/136 (40.44%), Query Frame = 0


Query: 66  SAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYT----LTPSKFSFSIDPLHLTWQH 125
           S   YD R   W        ++P       HST+ Y     +   ++ F  DP    W H
Sbjct: 410 SVECYDARDNCW------TAVSPMPVAMEFHSTIEYKDRIYVLQGEYFFCFDPRKDYWGH 469

Query: 126 VDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSVFAEYA 185
           +      RT  + AL  N    +AG C        VE+YD+E  TW    +LP    + A
Sbjct: 470 LPSMNIPRTQGLAALHKNCIYYIAGICRNHQRTFTVEVYDIEQNTWCRKRDLP---FDQA 529

Query: 186 TATWFSVAVDDDQLHV 198
           T+ +  V +   +LH+
Sbjct: 530 TSPYIKVLLLQGRLHL 536

[Close]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL
Match: A0A6J1GXN4 (F-box/kelch-repeat protein At1g23390 OS=Cucurbita moschata OX=3662 GN=LOC111458448 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 6.8e-175
Identity = 307/379 (81.00%), Postives = 337/379 (88.92%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWERAV SS+SH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWERAVSSSISHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI P A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPPTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTW HVDPPLTWRTDPIVALVA+R ++VAGT    DE PAVEI+DL+S TW TC+ELPS
Sbjct: 121 HLTWDHVDPPLTWRTDPIVALVAHRVIIVAGTSVFNDEPPAVEIHDLKSNTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD+ LHVMHK SG IFSFDPI  SW+GP+++KP+PDVFSSIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDNNLHVMHKTSGAIFSFDPIKKSWAGPFDMKPDPDVFSSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           GGGMV+VGL GSPEDVKSVKIY VVVQFSEW++IGEMPKSLVEKLQGESAEMASIG+SSA
Sbjct: 241 GGGMVIVGLLGSPEDVKSVKIYEVVVQFSEWRKIGEMPKSLVEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRRLVFTSSNVG+ DL+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVSGGDGGCRWGIVPNTVVDDRTRLRRLVFTSSNVGVEDLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TI +K+SDG
Sbjct: 361 RALRSESPQTTINVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL
Match: A0A6J1K3T3 (F-box/kelch-repeat protein At1g23390 OS=Cucurbita maxima OX=3661 GN=LOC111490395 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.6e-171
Identity = 301/379 (79.42%), Postives = 332/379 (87.60%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWE+AV SSLSH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWEQAVSSSLSHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI   A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPRTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTWQHVDPPLTWR DPIVALVA+R ++VAGTC   DE PAVEIY+L+SKTW TC+ELPS
Sbjct: 121 HLTWQHVDPPLTWRADPIVALVAHRVIIVAGTCVFNDEPPAVEIYELKSKTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD  LHVMHK SG +FSFDPI  SW+GP+++KP PDVFSSIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDHNLHVMHKTSGVVFSFDPIKKSWAGPFDMKPNPDVFSSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           G GMV+VGL GSPEDVKSVKIY VVVQFSE+++IGEMPKS +EKLQGESAEMASIG+SSA
Sbjct: 241 GDGMVIVGLSGSPEDVKSVKIYEVVVQFSEYRKIGEMPKSFIEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRR VFTSSNV +  L+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVRGSDYGCRWGIVPNTVVDDRTRLRRFVFTSSNVSVEHLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TIK+K+SDG
Sbjct: 361 RALRSESPQTTIKVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL
Match: A0A0A0KQ77 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G600900 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 6.0e-171
Identity = 302/376 (80.32%), Postives = 328/376 (87.23%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTE+TA++Q G   HGDILESILSHV LIDLASSSCVSRGWERAV SSLSH N+ KPWL
Sbjct: 1   MSTEDTADDQDGAVVHGDILESILSHVHLIDLASSSCVSRGWERAVSSSLSHFNSPKPWL 60

Query: 61  LLH---SPSAAAYDPRSAVWMDINYRPPITPA-APLRSSHSTLLYTLTPSKFSFSIDPLH 120
           LLH   S S AAYDPRSAVWMDIN R PITP+ APLRSSHSTLLY LTPS+FSFSIDPLH
Sbjct: 61  LLHFLSSASTAAYDPRSAVWMDINCRHPITPSTAPLRSSHSTLLYALTPSQFSFSIDPLH 120

Query: 121 LTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSV 180
           LTW HV PPLTWRTDPIVALVANR +VVAGTC  VDE PAVEIYDLES TW TC++LPS+
Sbjct: 121 LTWHHVSPPLTWRTDPIVALVANRPIVVAGTCGFVDEPPAVEIYDLESNTWDTCEDLPSI 180

Query: 181 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 240
           FAEYATA W+SVAVDD +LH+MHK+S  IFSFDP+  SW+GPYEVKP+PD+FSSI+GFAG
Sbjct: 181 FAEYATAVWYSVAVDDHKLHIMHKSSAAIFSFDPLKKSWTGPYEVKPDPDLFSSILGFAG 240

Query: 241 GGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSAG 300
           GGMVVVGL GSPEDVKSVKIY V  +FSEW EIGEMPKSLVEKLQGESAEMASIG+S AG
Sbjct: 241 GGMVVVGLVGSPEDVKSVKIYGVTAEFSEWGEIGEMPKSLVEKLQGESAEMASIGMSWAG 300

Query: 301 DFIFLHHGSDPVEVIQCEVVDSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLKKALR 360
           DF+F+HHGSDPVE+IQCEVV  GC WGIVPNTVVDDR RLR LVFTSSNVGI +LKKALR
Sbjct: 301 DFLFIHHGSDPVEMIQCEVVGGGCWWGIVPNTVVDDRIRLRGLVFTSSNVGIEELKKALR 360

Query: 361 LESPRITIKIKDSDGD 373
            E PRI+IKIKD   D
Sbjct: 361 SERPRISIKIKDRGRD 376

[Close]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL
Match: A0A5D3CZK9 (F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001160 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 4.0e-167
Identity = 300/377 (79.58%), Postives = 326/377 (86.47%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+E  G + HGDILESILSHVPLIDLASSSCVSRGWERAV SSLSH N+ KPWL
Sbjct: 1   MSTEETADEHDGASVHGDILESILSHVPLIDLASSSCVSRGWERAVSSSLSHFNSPKPWL 60

Query: 61  LLHSP---SAAAYDPRSAVWMDINYRPPITPA-APLRSSHSTLLYTLTPSKFSFSIDPLH 120
           LLH P   SAAAYDPRSA+WMDIN R PITPA APLRSSHSTLLYTLTPS+FSFSIDPLH
Sbjct: 61  LLHFPSSASAAAYDPRSAIWMDINCRHPITPATAPLRSSHSTLLYTLTPSQFSFSIDPLH 120

Query: 121 LTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSV 180
           L W HV PPLTWRTDPIVALVA+R +VVAGTC  VDE PAVEIYDLES TW T + LPS+
Sbjct: 121 LKWHHVSPPLTWRTDPIVALVASRLIVVAGTCVFVDEPPAVEIYDLESNTWETYEYLPSI 180

Query: 181 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 240
           FAEYATA W+SVAVDD +LH+MHK+S  IFSFDP   SW+GPYE KP+P++FSSIIGFAG
Sbjct: 181 FAEYATAVWYSVAVDDHKLHIMHKSSAAIFSFDPTEKSWAGPYESKPDPNLFSSIIGFAG 240

Query: 241 GGMVVVGLKGSPEDVKSVKIYNV-VVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           G MVVVGL GSPEDV+SVKIY V   +FSEW+EIGEMPKSLVEKLQGESAEMASIG+S A
Sbjct: 241 GEMVVVGLTGSPEDVQSVKIYGVTAAEFSEWREIGEMPKSLVEKLQGESAEMASIGMSWA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVVDSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLKKAL 360
           GDF+F+HHGSDPVE+IQCEVV  GCRWG VPNTVVDDR RLR LV TSSN+GI +LKKAL
Sbjct: 301 GDFLFIHHGSDPVEMIQCEVVGGGCRWGSVPNTVVDDRIRLRGLVLTSSNMGIEELKKAL 360

Query: 361 RLESPRITIKIKDSDGD 373
           R E PRITIKIKD  GD
Sbjct: 361 RSERPRITIKIKDCVGD 377

[Close]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL
Match: E5GBI1 (F-box/kelch protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 4.0e-167
Identity = 300/377 (79.58%), Postives = 326/377 (86.47%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+E  G + HGDILESILSHVPLIDLASSSCVSRGWERAV SSLSH N+ KPWL
Sbjct: 1   MSTEETADEHDGASVHGDILESILSHVPLIDLASSSCVSRGWERAVSSSLSHFNSPKPWL 60

Query: 61  LLHSP---SAAAYDPRSAVWMDINYRPPITPA-APLRSSHSTLLYTLTPSKFSFSIDPLH 120
           LLH P   SAAAYDPRSA+WMDIN R PITPA APLRSSHSTLLYTLTPS+FSFSIDPLH
Sbjct: 61  LLHFPSSASAAAYDPRSAIWMDINCRHPITPATAPLRSSHSTLLYTLTPSQFSFSIDPLH 120

Query: 121 LTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSV 180
           L W HV PPLTWRTDPIVALVA+R +VVAGTC  VDE PAVEIYDLES TW T + LPS+
Sbjct: 121 LKWHHVSPPLTWRTDPIVALVASRLIVVAGTCVFVDEPPAVEIYDLESNTWETYEYLPSI 180

Query: 181 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 240
           FAEYATA W+SVAVDD +LH+MHK+S  IFSFDP   SW+GPYE KP+P++FSSIIGFAG
Sbjct: 181 FAEYATAVWYSVAVDDHKLHIMHKSSAAIFSFDPTEKSWAGPYESKPDPNLFSSIIGFAG 240

Query: 241 GGMVVVGLKGSPEDVKSVKIYNV-VVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           G MVVVGL GSPEDV+SVKIY V   +FSEW+EIGEMPKSLVEKLQGESAEMASIG+S A
Sbjct: 241 GEMVVVGLTGSPEDVQSVKIYGVTAAEFSEWREIGEMPKSLVEKLQGESAEMASIGMSWA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVVDSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLKKAL 360
           GDF+F+HHGSDPVE+IQCEVV  GCRWG VPNTVVDDR RLR LV TSSN+GI +LKKAL
Sbjct: 301 GDFLFIHHGSDPVEMIQCEVVGGGCRWGSVPNTVVDDRIRLRGLVLTSSNMGIEELKKAL 360

Query: 361 RLESPRITIKIKDSDGD 373
           R E PRITIKIKD  GD
Sbjct: 361 RSERPRITIKIKDCVGD 377

[Close]

BLAST of Lsi04G005640 vs. NCBI nr
Match: XP_022956902.1 (F-box/kelch-repeat protein At1g23390 [Cucurbita moschata])

HSP 1 Score: 623.2 bits (1606), Expect = 1.4e-174
Identity = 307/379 (81.00%), Postives = 337/379 (88.92%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWERAV SS+SH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWERAVSSSISHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI P A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPPTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTW HVDPPLTWRTDPIVALVA+R ++VAGT    DE PAVEI+DL+S TW TC+ELPS
Sbjct: 121 HLTWDHVDPPLTWRTDPIVALVAHRVIIVAGTSVFNDEPPAVEIHDLKSNTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD+ LHVMHK SG IFSFDPI  SW+GP+++KP+PDVFSSIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDNNLHVMHKTSGAIFSFDPIKKSWAGPFDMKPDPDVFSSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           GGGMV+VGL GSPEDVKSVKIY VVVQFSEW++IGEMPKSLVEKLQGESAEMASIG+SSA
Sbjct: 241 GGGMVIVGLLGSPEDVKSVKIYEVVVQFSEWRKIGEMPKSLVEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRRLVFTSSNVG+ DL+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVSGGDGGCRWGIVPNTVVDDRTRLRRLVFTSSNVGVEDLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TI +K+SDG
Sbjct: 361 RALRSESPQTTINVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. NCBI nr
Match: XP_023552273.1 (F-box/kelch-repeat protein At1g23390 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 621.3 bits (1601), Expect = 5.4e-174
Identity = 306/379 (80.74%), Postives = 338/379 (89.18%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWERAV SSLSH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWERAVSSSLSHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI P A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPPTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTWQHVDPPLTWRTDPIVALVA+R +VVAGTC   DE PAVEI+DL+S TW TC+ELPS
Sbjct: 121 HLTWQHVDPPLTWRTDPIVALVAHRLIVVAGTCVFNDEPPAVEIHDLKSNTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD+ LHVMHK SG +FSFDPIN SW+GP+++KP+PD+F+SIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDNNLHVMHKASGAVFSFDPINKSWAGPFDMKPDPDIFTSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           GGGMV+VGL GSPEDVKSVKIY VVVQF + ++IGEMPKS VEKLQGESAEMASIG+SSA
Sbjct: 241 GGGMVIVGLLGSPEDVKSVKIYKVVVQFFQCRKIGEMPKSFVEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRRLVFTSSNVG+ DL+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVSGGDGGCRWGIVPNTVVDDRTRLRRLVFTSSNVGVEDLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TIK+K+SDG
Sbjct: 361 RALRSESPQTTIKVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. NCBI nr
Match: KAG6601515.1 (F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032295.1 F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618.2 bits (1593), Expect = 4.5e-173
Identity = 305/379 (80.47%), Postives = 336/379 (88.65%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWERAV SS+SH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWERAVSSSISHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI P A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPPTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTW HVDPPLTWRTDPIVALVA+R ++VAGT    DE PAVEI+DL+S TW TC+ELPS
Sbjct: 121 HLTWHHVDPPLTWRTDPIVALVAHRVIIVAGTSVFNDEPPAVEIHDLKSNTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD+ LHVMHK SG +FSFDPI  SW+GP+++KP+PDVFSSIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDNNLHVMHKTSGAVFSFDPIKKSWAGPFDMKPDPDVFSSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           GGGMV+VGL GSPEDVKSVKIY VVVQFSE ++IGEMPKS VEKLQGESAEMASIG+SSA
Sbjct: 241 GGGMVIVGLLGSPEDVKSVKIYEVVVQFSECRKIGEMPKSFVEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRRLVFTSSNVG+ DL+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVSGGDGGCRWGIVPNTVVDDRTRLRRLVFTSSNVGVEDLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TIK+K+SDG
Sbjct: 361 RALRSESPQTTIKVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. NCBI nr
Match: XP_022994769.1 (F-box/kelch-repeat protein At1g23390 [Cucurbita maxima])

HSP 1 Score: 610.5 bits (1573), Expect = 9.4e-171
Identity = 301/379 (79.42%), Postives = 332/379 (87.60%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTEETA+EQ G A HGDILE ILSH+PLIDLASSS VSRGWE+AV SSLSH NALKPWL
Sbjct: 1   MSTEETADEQDGAAVHGDILECILSHLPLIDLASSSSVSRGWEQAVSSSLSHFNALKPWL 60

Query: 61  LLH-----SPSAAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPL 120
           LLH     SPSAAAYDPRSAVWM+INY  PI   A L+SSHS+LLYTLTPSKFSFSIDPL
Sbjct: 61  LLHFHPKSSPSAAAYDPRSAVWMNINYHSPIPRTAHLQSSHSSLLYTLTPSKFSFSIDPL 120

Query: 121 HLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPS 180
           HLTWQHVDPPLTWR DPIVALVA+R ++VAGTC   DE PAVEIY+L+SKTW TC+ELPS
Sbjct: 121 HLTWQHVDPPLTWRADPIVALVAHRVIIVAGTCVFNDEPPAVEIYELKSKTWDTCEELPS 180

Query: 181 VFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFA 240
           +FAEYATA WFS+AVDD  LHVMHK SG +FSFDPI  SW+GP+++KP PDVFSSIIGFA
Sbjct: 181 IFAEYATAMWFSIAVDDHNLHVMHKTSGVVFSFDPIKKSWAGPFDMKPNPDVFSSIIGFA 240

Query: 241 GGGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSA 300
           G GMV+VGL GSPEDVKSVKIY VVVQFSE+++IGEMPKS +EKLQGESAEMASIG+SSA
Sbjct: 241 GDGMVIVGLSGSPEDVKSVKIYEVVVQFSEYRKIGEMPKSFIEKLQGESAEMASIGMSSA 300

Query: 301 GDFIFLHHGSDPVEVIQCEVV---DSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLK 360
           GDFIFLHHGSDPVEVIQCEVV   D GCRWGIVPNTVVDDRTRLRR VFTSSNV +  L+
Sbjct: 301 GDFIFLHHGSDPVEVIQCEVVRGSDYGCRWGIVPNTVVDDRTRLRRFVFTSSNVSVEHLQ 360

Query: 361 KALRLESPRITIKIKDSDG 372
           +ALR ESP+ TIK+K+SDG
Sbjct: 361 RALRSESPQTTIKVKESDG 379

[Close]

BLAST of Lsi04G005640 vs. NCBI nr
Match: XP_004135258.1 (F-box/kelch-repeat protein At1g23390 [Cucumis sativus] >KGN51788.1 hypothetical protein Csa_009371 [Cucumis sativus])

HSP 1 Score: 610.1 bits (1572), Expect = 1.2e-170
Identity = 302/376 (80.32%), Postives = 328/376 (87.23%), Query Frame = 0


Query: 1   MSTEETANEQGGGAAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNALKPWL 60
           MSTE+TA++Q G   HGDILESILSHV LIDLASSSCVSRGWERAV SSLSH N+ KPWL
Sbjct: 1   MSTEDTADDQDGAVVHGDILESILSHVHLIDLASSSCVSRGWERAVSSSLSHFNSPKPWL 60

Query: 61  LLH---SPSAAAYDPRSAVWMDINYRPPITPA-APLRSSHSTLLYTLTPSKFSFSIDPLH 120
           LLH   S S AAYDPRSAVWMDIN R PITP+ APLRSSHSTLLY LTPS+FSFSIDPLH
Sbjct: 61  LLHFLSSASTAAYDPRSAVWMDINCRHPITPSTAPLRSSHSTLLYALTPSQFSFSIDPLH 120

Query: 121 LTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLESKTWSTCDELPSV 180
           LTW HV PPLTWRTDPIVALVANR +VVAGTC  VDE PAVEIYDLES TW TC++LPS+
Sbjct: 121 LTWHHVSPPLTWRTDPIVALVANRPIVVAGTCGFVDEPPAVEIYDLESNTWDTCEDLPSI 180

Query: 181 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 240
           FAEYATA W+SVAVDD +LH+MHK+S  IFSFDP+  SW+GPYEVKP+PD+FSSI+GFAG
Sbjct: 181 FAEYATAVWYSVAVDDHKLHIMHKSSAAIFSFDPLKKSWTGPYEVKPDPDLFSSILGFAG 240

Query: 241 GGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKLQGESAEMASIGLSSAG 300
           GGMVVVGL GSPEDVKSVKIY V  +FSEW EIGEMPKSLVEKLQGESAEMASIG+S AG
Sbjct: 241 GGMVVVGLVGSPEDVKSVKIYGVTAEFSEWGEIGEMPKSLVEKLQGESAEMASIGMSWAG 300

Query: 301 DFIFLHHGSDPVEVIQCEVVDSGCRWGIVPNTVVDDRTRLRRLVFTSSNVGIRDLKKALR 360
           DF+F+HHGSDPVE+IQCEVV  GC WGIVPNTVVDDR RLR LVFTSSNVGI +LKKALR
Sbjct: 301 DFLFIHHGSDPVEMIQCEVVGGGCWWGIVPNTVVDDRIRLRGLVFTSSNVGIEELKKALR 360

Query: 361 LESPRITIKIKDSDGD 373
            E PRI+IKIKD   D
Sbjct: 361 SERPRISIKIKDRGRD 376

[Close]

BLAST of Lsi04G005640 vs. TAIR 10
Match: AT1G23390.1 (Kelch repeat-containing F-box family protein )

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-65
Identity = 139/383 (36.29%), Postives = 218/383 (56.92%), Query Frame = 0


Query: 4   EETANEQGGG-------AAHGDILESILSHVPLIDLASSSCVSRGWERAVLSSLSHSNAL 63
           E+  N   GG       +  GDILESILS++PL+DL S+  VS+ W RAV  SL     +
Sbjct: 2   EKKKNNNNGGDFGEEESSIDGDILESILSYLPLLDLDSACQVSKSWNRAVFYSLRRLKTM 61

Query: 64  KPWLLLH----------SPSAAAYDPRSAVWMDIN-YRPPITPAAPLRSSHSTLLYTLTP 123
            PWL ++          +  A AYDP+S  W+++N    P+   +  RSSHSTLLY L+P
Sbjct: 62  -PWLFVYNQRNSPPYTMATMAMAYDPKSEAWIELNTASSPVEHVSVARSSHSTLLYALSP 121

Query: 124 SKFSFSIDPLHLTWQHVDPPLTWRTDPIVALVANRAVVVAGTCDLVDEHPAVEIYDLES- 183
           ++FSFS D  HLTWQHV PP  WR DPIVA+V    ++  G CD  ++  AVE++D+ES 
Sbjct: 122 ARFSFSTDAFHLTWQHVAPPRVWRIDPIVAVVGRSLIIAGGVCDFEEDRFAVELFDIESG 181

Query: 184 -KTWSTCDELPSVFAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKP 243
              W  C+ +P    E A++TW SVAV  ++++V  K SG   SF+P+  SW+   ++ P
Sbjct: 182 DGAWERCESMPDFLYESASSTWLSVAVSSEKMYVTEKRSGVTCSFNPVTRSWTKLLDLCP 241

Query: 244 -EPDVFSSIIGFAGGGMVVVGLKGSPEDVKSVKIYNVV---VQFSEWQEIGEMPKSLVEK 303
            E  ++S  IGF+   +++ G+ G   +   ++++ V+       +++ IG MP++ +EK
Sbjct: 242 GECSLYSRSIGFSVNRLIMAGIIGDEYNPTGIELWEVIDSDESHLKFESIGSMPETYLEK 301

Query: 304 LQGESAE--MASIGLSSAGDFIFLHHGSDPVEVIQCEVVDSG--CRWGIVPNTVVDDRT- 357
           L+G +++  + SI L++ GD +++H  ++    I    ++ G  C+W  +PN     +  
Sbjct: 302 LRGINSDWPLTSIVLNAVGDMVYVHGAAENGGEIVAAEIEGGKLCKWRTLPNADATWKKS 361

[Close]

BLAST of Lsi04G005640 vs. TAIR 10
Match: AT3G24760.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-17
Identity = 92/363 (25.34%), Postives = 163/363 (44.90%), Query Frame = 0


Query: 18  DILESILSHVPLIDLASSSCVSRGWERAVLS---SLSHSNALKPWLLL---HSPS----- 77
           D+ ESIL H+P+  L   + VS+ W   + S   S S S +  PWL L   H+ S     
Sbjct: 19  DVTESILYHLPIPSLVRFTLVSKQWRSLITSLPPSPSPSPSSPPWLFLFGIHNTSSFHNQ 78

Query: 78  AAAYDPRSAVWMDINYRPPITPAAPLRSSHSTLLYTLTPSKFSFSIDPLHLTWQHVDPPL 137
           + A+DP S  W+ +   PP + ++      +  L+T  P +FSFS   L   W+   P  
Sbjct: 79  SFAFDPLSNTWLRL---PPSSSSSDHLVGSNRFLFTTAP-RFSFS-PILKPNWRFTSPVR 138

Query: 138 TWRTDPIVALV-----ANRAVVVAGTCDL-----VDEHPAVEIYDLESKTWSTCDELPSV 197
             R +P++ +      +++ ++V G+  +     ++E  AV+IYD    +W  C  LP+ 
Sbjct: 139 FPRINPLLTVFTTLSNSSKLILVGGSSRIGGLVDIEERLAVQIYDPVLDSWELCSPLPAD 198

Query: 198 FAEYATATWFSVAVDDDQLHVMHKNSGTIFSFDPINISWSGPYEVKPEPDVFSSIIGFAG 257
           F         + A+   + +V    S  I SF   + +WS    +KP P +  + +    
Sbjct: 199 FRSGQDHQTLTSALFKRRFYVFDNYSCFISSFCLDSYTWSDVQTLKP-PGLSFAYLNSCN 258

Query: 258 GGMVVVGLKGSPEDVKSVKIYNVVVQFSEWQEIGEMPKSLVEKL---QGESAEMASIGLS 317
           G +V+ G+ G      S  ++++     E+ EI  MP+ L+  L     E  +  S+  +
Sbjct: 259 GMLVLGGMCGF-----SFNLWSIEEGSMEFSEIAVMPEDLLFGLVDSDDEDDKFRSLKCA 318

Query: 318 SAGDFIFLH----HGSDPVEVIQCEVVDSG-CRWGIVPNTVVDDRTRLRRLVFTSSNVGI 352
            +G+ +++     H   P  V +    ++G C W  VP  +     +  ++V   S V I
Sbjct: 319 GSGNLVYVFNDDCHKKFPACVCEIGGGENGICSWRRVP-CLPSPVNKFHKVVSFCSTVSI 369

The following BLAST results are available for this feature:

BLAST of Lsi04G005640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDE3	3.6e-64	36.29	F-box/kelch-repeat protein At1g23390 OS=Arabidopsis thaliana OX=3702 GN=At1g2339...	[more]
Q3EB08	2.8e-16	25.34	F-box/kelch-repeat protein At3g24760 OS=Arabidopsis thaliana OX=3702 GN=At3g2476...	[more]
Q08CL3	1.9e-04	27.21	Kelch repeat and BTB domain-containing protein 8 OS=Danio rerio OX=7955 GN=kbtbd...	[more]

BLAST of Lsi04G005640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXN4	6.8e-175	81.00	F-box/kelch-repeat protein At1g23390 OS=Cucurbita moschata OX=3662 GN=LOC1114584...	[more]
A0A6J1K3T3	4.6e-171	79.42	F-box/kelch-repeat protein At1g23390 OS=Cucurbita maxima OX=3661 GN=LOC111490395...	[more]
A0A0A0KQ77	6.0e-171	80.32	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G600900 PE=4 ...	[more]
A0A5D3CZK9	4.0e-167	79.58	F-box/kelch-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
E5GBI1	4.0e-167	79.58	F-box/kelch protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Lsi04G005640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956902.1	1.4e-174	81.00	F-box/kelch-repeat protein At1g23390 [Cucurbita moschata]	[more]
XP_023552273.1	5.4e-174	80.74	F-box/kelch-repeat protein At1g23390 [Cucurbita pepo subsp. pepo]	[more]
KAG6601515.1	4.5e-173	80.47	F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022994769.1	9.4e-171	79.42	F-box/kelch-repeat protein At1g23390 [Cucurbita maxima]	[more]
XP_004135258.1	1.2e-170	80.32	F-box/kelch-repeat protein At1g23390 [Cucumis sativus] >KGN51788.1 hypothetical ...	[more]

BLAST of Lsi04G005640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23390.1	2.6e-65	36.29	Kelch repeat-containing F-box family protein	[more]
AT3G24760.1	2.0e-17	25.34	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 18..50 e-value: 2.3E-6 score: 27.3
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 63..321 e-value: 2.0E-14 score: 55.1
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 65..305
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 5..355
None	No IPR available	PANTHER	PTHR24414:SF44	KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN	coord: 5..355
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G005640.1	Lsi04G005640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding