Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTGAAATCGCTTCTCCGGCTCTTTCCTTCTTCTCTAGTCTCTAGGGCACAACGTACTCCAATTACTTGTTCGTCAGAAAATCTGAAAGATAAGCCTGGAAGCTTTCAACTTCCTTGCGATCTTTTTTCTACTTCAATGGCGGATTCTTCCTCTTCCCCTGCGACTCTCGATTCAAATCCTCAAGCTGCCGAGCCCGAAAATCCCAATTCCCAGGCCAACAAACCCGAATCTACCGCTTCTTCTTTTCCTCCACCGCAATCGCTACCACCATCGTCGCTTTCTGTCGGAATAAACCCTACTTTGCATCCACCCTTAGTGTCAACGCCGCAACCACCTCCTTCTCTATCGTATGCCCCCTCGCCCTTATCCGGTACGGTGGCTGTTCCTCCGACGGCTCCGTCTTTCCGGCCGGTGCCTCTCTCAGCTCATCACTTCTCACCCATGCCCGGCACTGGCATGCTGAACCCAAGCTATTCAAACCCTGGGGTTCAGCCTCCGGGGGTTAGCTCGGTTGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGCACGGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGGCTTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAACGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTCTCCCTGGTGGGTTTTCTCTATCCCTATTGTTTCTAACATTTCAATTGCCAATGTGATTGCGGAATAATTTTGAACCCTTTCTCTTATTTAGTGATTGTCATTGTGTTGCTTGCAACTGTTAACCATTTTGTTTGTTGACGCTGTCAATTTACACCATCCGCATTCATTTCGAGTTCGTTATCAACTGGAATAAGTCGAACTTCGACCAAAATCTTACTTTGGTTTTCGTGTGATTTTGACTTGAAAATATATAATTTTCTAAGTTTGACGCAAAGTAAAAGTTCCGCGCATGTTATGATGCCTCGGAAAGAGTTTGCAAAAATAAGTTCGGAGTCTATTAAAAATTTTCGTGTTGGTTAGATGAAGGGTATCGATGACAGGATGTTTTCTCCTACAGCGTCTTGTCTCTTGATTGAATACGGTGAGAAAGGTTGGAAGGCTTCATATTGCTTAGAGAACTCCCAACTACAACTCCTTTTTTGGTATGGTCATTCATATTTGTCTGTTATTCTTGTTTGCTTTCAGCATGGTTTTTTTTTTAAATGGGATTCTGTTACTAAGCCCAGAGAGACCTTGGTATTTATAATACTAGTATAGTATTAAAGAGCCCTCCCTTTTGCCCTGCTACATAATATACGGCTGTGTCATTTTTATTTACTAGGATTTTACTGGTAGTTATATTGGATACTGTCCCTGGATATTTGAATTGCCAGAAGCAGACCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGGTATCAAATTCTCCTAATTAACTTTTTTTCTGACATTTTCTTTGATTCCTTATGCTACACCATCAAATCAAGATCTAACATTTCGAAATTTGGGAGTGAATTTTGAGAACATGCAAATTTATTTTTTTTCAATCGATCTGTGTGAATGAGTTGCTCAAAGCGTTGTGCTTCTTAAATCATAAAATTCTGCTTTTGATGGACGGGATTTTGAGAAGGCTGCAGTTCAAGAGTAAGGTAAGACTAATTTACGTAACAGTTCAAGGAATTTGGTGCTATCATTTGAATGTTTTCATCAGGTTATCTATGCATTCAGCTGCTGATAGTTTCCATTCCTATGCTGCCATCGTTTATATGCTTTGGATTTTGGTAATGGCATTTATGAATCCTCATCAATTATTCTTCCATATACTTTAAGCACCATTAGATGGTTAGATGTGAGTAGTCTGCCAACACTTTCTGATGCATTGGCAAGATGTTTTTCTTTATTTGTGCAGGAGTTCCACGTTTCCCTTCTCCATATCCAGTTATGATTAGGACGCCTTTTCATCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCAATGCCACGACCTCCTATTCCTGGGATTCCTGGTGTGCGTCCAATCATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGTGTTACACCAGCCGAACAACCCCAAACTACTATTTATATTGGCCGAATTGCACAATCAGTGGATAATGATTTCATGCTGTCCCTTCTTCAGGTAGGTTAATCATCCTCCATATTGCATTTGTTTTGTTTTGTTTTTTTTTTCTTTTCTTCAATTCATTGGCTTATATTTGATATCTATCTGTTTCTTTTAGCTATGTGGACCAGTGAAGAGCTGGAAACGTGCCCAAAATCCTTCGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGCGTTCTTCGTGCGCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTAGTGGTATAATGGGATTTGTTACAATTCAAGTAGATATCCTGTTTTATCTTACTAATATTCAATATTTGATCTTTATAAATCTATTACAAAAGTTTCTGGTTTTGTTTGTATTAACATTTTCCATATTGCCATACTCTTATTTTCTACATGTGCCATAGCCTTTCAATTGCCGGTCAATAAATGTTAATGTGTACTTAAACTTTTCTTGTCTTTTGAATGTTCATCTTCTTCTAAATCCTTACCCTTTTGAAAATTATTATAAAACGCATTGGTATACTTTTGCTCTACCATCTAAGGTGTTCGTTTGAAAATTTGTTTAATCTTAACATTCCTTCTTAACAGGGGACATTGCTTCTTCTTCTTTCCTTTTATTTATTCTTTTTTAAAAGATAAATATGTAGGGGACATTACAGTTATGTGTTTGGTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTATTTCTTTTTCATTGTGACATTCAGATTAAAGCTTCATGGGTTATTTATCAATATTGGACTTCAATGTTATAATGTGGTTCTCTCACGTTTTACTTAAGTCATTCCTTTTTCCCTTCTAGAGGCAATTGTATGGTATAGGTTAGAATCATAAGTTGTTTAGTTACAAAATAGCTCTCCAATTGGAGATTGAATAGGAAAAGCTGTAAAGAGTAAGAGGATGTTTATTCTTGCACCAGAAAAAAAAAACAGTAGAAAGATTTAAGGTTGACCTCTGTGTTACTCTTTTTCCCCCTCCTTATCAAGCTCTTGTTCATTATGGTTTGATTTTTTTCATTTAGATGACAGACATTACTTTTTTTCAACCTAGAAATGCGGTATGGATATTTATTTTGTTTTCTATCACTAAAATAAGCGGTAAACTTGTTTCTAATGGAGAATAAAAGAAACAGTAAGTTAAGCTAGTTTGTTTTTCTCATTCTTTCTTATGGCATCGCATCATATATCAAGTTTTTTGTTCCACATTCAACTTTCAAGTTTCAACTTATTTTAATATAAATTTATCATTATGTTTTAAACAAACAGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCTGAGAATTCAAAGAAACTGAAAGAAACACAAGTTTCAGAGACTAAAGAAGAAGAAGCAGCCACTACGAATGTGGCTAAAAATGAAACTTCAAAGCCCTCTGCAGAGGATTCAAAGGAAGATCACGATTCAGGGGAAAAAGATCTTGACATTGCCCGTTCTGCAGTTTTAAGCGATGAAGATAGAGATGCAGATCGTGAGGCGTCAGAAAAGCTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTTCTGACAACCGCTGGTGTCTCTGGTAACTCAAGTGTGGAACCATCTGCTAAACTGAAAGAGGGTGAAGCTGACGCTGATATTTTGAAACCTGGTGAGTGATTATAGTTGGTTGTTCAAAATCTCCTCTTTATAGCATGAAAATTGAAAAGCATGCACAGTAGATATAAAATGTTTATAGCATGGTCTTATGAGTGTGCAAGTGCTTGGTTGCTTAATTGTCATAACATCCTACAGATGCACCTGATGATAGAAATGATGATGACACAACTAGTGACCATAAACAAACTAGTGAGCGTGACAAGCCTGACACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTAGAGAAAGAGACAGGGAGAGGGATCTGAAAAGGGATAAGGAGCGGGAAGTTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGGCCGAGCGACAGTATGAAGAATGTCTCAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGAAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGACGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAAAGGTCTAGAGAAAAGGAAGATGATTCGGTCGATAGAGAGAGAGAGGAAGGAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAGCAGAAAGACCCACTGAAACTTTTATCTGGTCAGAAGATGAGTGTCAACGAGAAAACTGTTCTTGCCGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACGTGAATCTGAGCTTGACTCTAGCTGTGATAACCATTTAGGTAATTGTCTTACATGTCAACTGTGAGAAGCCTTCTTTTTTATCCGTATGTCTATTACCTTGTTCTCTTGTATTCTATTATTTGGATGACATATCTGGTATGTAACAGGGGATGGGATCTTACAAAATGGTAGTGGTGATGAATTAAATACGATACCATCAGAGACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTGGGATCTGGAAAACGGACTGCTGTACTTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAAGAGAAAAAGATGAGGCCGCTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTACCGCCAAATTTAGCTGCAGCAGCCGAGTTTGCAAAACGTATATCTAATGTTAATTCCAAAGAAGAGAAGCCTGATGGTGAAAGGGAGCGAGGAAGGCGTTCCAGTGAAAAGTCAGGTCATAGAGATCGAAATGATGAGGATACCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGATAGGGAGCGAGACCATGTTTTGGATAAAGTAAAAACACCAGATAACAAAAAGCTTTTGGATGCGAAACAGTTGATTGATATGATTCCAAAGACGAAAGAGGAATTATTCTCATATGATATAAATTGGGCTATTTACGAAAAGGTACCGAGTCTTACTGATTTTCTTTTTCTTAGTATTTTATGGGCGTTGAAATTTTAGATTGTGCTACATGAATAAATTTTAGACTGCTACATGAATAACTTCGGTGAATTATGTTTAATTGTTTATAGGATTATGTTGGCATGAAGTTGTAATTGCAAAGTCGATGGTTGTTCTGTAGTTGTGCTTGTGCATAACATTAATAATACTGGAAATAAGGATAACACTGCTGTCATATCATTGACAAGTCTTTTCTCATTTCATTCTCTTTACCTTGTGCTTTCTATATCAGTACATGATGAAAATGATTTTTAATCCCCCTTCCCCGGGGGGGTGTGATTAGAACCTTGAGTAGAGTTGGACCCAACTGCATATTCTTATTCCTGCTATTGTTTGGTGATGAATATATATGTTATGTCTTTAGGAAAATATTTTTCGGTAACTTTTTCTGAAACTTTAACGCATCATTATGCTTATTTGCAGCATGCACTACATGAGAGAATGAGACCGTGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTCGTGGATTACATAGTTTCAAGTACTCAGGAACACGTAAAGGCATCTCAGATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTCATCTTCGAAATAAAAAAGGTAGAGACTGGTCTAGCTTTCAGAACAAAAGCA
mRNA sequence
GTTCTGAAATCGCTTCTCCGGCTCTTTCCTTCTTCTCTAGTCTCTAGGGCACAACGTACTCCAATTACTTGTTCGTCAGAAAATCTGAAAGATAAGCCTGGAAGCTTTCAACTTCCTTGCGATCTTTTTTCTACTTCAATGGCGGATTCTTCCTCTTCCCCTGCGACTCTCGATTCAAATCCTCAAGCTGCCGAGCCCGAAAATCCCAATTCCCAGGCCAACAAACCCGAATCTACCGCTTCTTCTTTTCCTCCACCGCAATCGCTACCACCATCGTCGCTTTCTGTCGGAATAAACCCTACTTTGCATCCACCCTTAGTGTCAACGCCGCAACCACCTCCTTCTCTATCGTATGCCCCCTCGCCCTTATCCGGTACGGTGGCTGTTCCTCCGACGGCTCCGTCTTTCCGGCCGGTGCCTCTCTCAGCTCATCACTTCTCACCCATGCCCGGCACTGGCATGCTGAACCCAAGCTATTCAAACCCTGGGGTTCAGCCTCCGGGGGTTAGCTCGGTTGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGCACGGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGGCTTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAACGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTCTCCCTGGTGGGTTTTCTCTATCCCTATTGTTTCTAACATTTCAATTGCCAATTTTGACGCAAAGTAAAAGTTCCGCGCATGTTATGATGCCTCGGAAAGAGTTTGCAAAAATAAGTTCGGAGTCTATTAAAAATTTTCGTATGAAGGGTATCGATGACAGGATGTTTTCTCCTACAGCGTCTTGTCTCTTGATTGAATACGGTGAGAAAGGTTGGAAGGCTTCATATTGCTTAGAGAACTCCCAACTACAACTCCTTTTTTGGTATGGTCATTCATATTTGTCTGTTATTCTTGTTTGCTTTCAGCATGTTATATTGGATACTGTCCCTGGATATTTGAATTGCCAGAAGCAGACCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGAACATGCAAATTTATTTTTTTTCAATCGATCTGTGTGAATGAGTTGCTCAAAGCGTTGTGCTTCTTAAATCATAAAATTCTGCTTTTGATGGACGGGATTTTGAGAAGGCTGCAGTTCAAGAGTAAGTTTCCATTCCTATGCTGCCATCGTTTATATGCTTTGGATTTTGGTAATGGCATTTATGAATCCTCATCAATTATTCTTCCATATACTTTAAGCACCATTAGATGGTTAGATGTGAGTAGAGTTCCACGTTTCCCTTCTCCATATCCAGTTATGATTAGGACGCCTTTTCATCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCAATGCCACGACCTCCTATTCCTGGGATTCCTGGTGTGCGTCCAATCATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGTGTTACACCAGCCGAACAACCCCAAACTACTATTTATATTGGCCGAATTGCACAATCAGTGGATAATGATTTCATGCTGTCCCTTCTTCAGCTATGTGGACCAGTGAAGAGCTGGAAACGTGCCCAAAATCCTTCGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGCGTTCTTCGTGCGCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTAGTGATGACAGACATTACTTTTTTTCAACCTAGAAATGCGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCTGAGAATTCAAAGAAACTGAAAGAAACACAAGTTTCAGAGACTAAAGAAGAAGAAGCAGCCACTACGAATGTGGCTAAAAATGAAACTTCAAAGCCCTCTGCAGAGGATTCAAAGGAAGATCACGATTCAGGGGAAAAAGATCTTGACATTGCCCGTTCTGCAGTTTTAAGCGATGAAGATAGAGATGCAGATCGTGAGGCGTCAGAAAAGCTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTTCTGACAACCGCTGGTGTCTCTGGTAACTCAAGTGTGGAACCATCTGCTAAACTGAAAGAGGGTGAAGCTGACGCTGATATTTTGAAACCTGATGCACCTGATGATAGAAATGATGATGACACAACTAGTGACCATAAACAAACTAGTGAGCGTGACAAGCCTGACACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTAGAGAAAGAGACAGGGAGAGGGATCTGAAAAGGGATAAGGAGCGGGAAGTTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGGCCGAGCGACAGTATGAAGAATGTCTCAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGAAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGACGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAAAGGTCTAGAGAAAAGGAAGATGATTCGGTCGATAGAGAGAGAGAGGAAGGAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAGCAGAAAGACCCACTGAAACTTTTATCTGGTCAGAAGATGAGTGTCAACGAGAAAACTGTTCTTGCCGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACGTGAATCTGAGCTTGACTCTAGCTGTGATAACCATTTAGGGGATGGGATCTTACAAAATGGTAGTGGTGATGAATTAAATACGATACCATCAGAGACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTGGGATCTGGAAAACGGACTGCTGTACTTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAAGAGAAAAAGATGAGGCCGCTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTACCGCCAAATTTAGCTGCAGCAGCCGAGTTTGCAAAACGTATATCTAATGTTAATTCCAAAGAAGAGAAGCCTGATGGTGAAAGGGAGCGAGGAAGGCGTTCCAGTGAAAAGTCAGGTCATAGAGATCGAAATGATGAGGATACCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGATAGGGAGCGAGACCATGTTTTGGATAAAGTAAAAACACCAGATAACAAAAAGCTTTTGGATGCGAAACAGTTGATTGATATGATTCCAAAGACGAAAGAGGAATTATTCTCATATGATATAAATTGGGCTATTTACGAAAAGGTACCGAGTCTTACTGATTTTCTTTTTCTTATTGTGCTTGTGCATAACATTAATAATACTGGAAATAAGGATAACACTGCTGTCATATCATTGACAAGAAAATATTTTTCGGTAACTTTTTCTGAAACTTTAACGCATCATTATGCTTATTTGCAGCATGCACTACATGAGAGAATGAGACCGTGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTCGTGGATTACATAGTTTCAAGTACTCAGGAACACGTAAAGGCATCTCAGATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTCATCTTCGAAATAAAAAAGGTAGAGACTGGTCTAGCTTTCAGAACAAAAGCA
Coding sequence (CDS)
GTTCTGAAATCGCTTCTCCGGCTCTTTCCTTCTTCTCTAGTCTCTAGGGCACAACGTACTCCAATTACTTGTTCGTCAGAAAATCTGAAAGATAAGCCTGGAAGCTTTCAACTTCCTTGCGATCTTTTTTCTACTTCAATGGCGGATTCTTCCTCTTCCCCTGCGACTCTCGATTCAAATCCTCAAGCTGCCGAGCCCGAAAATCCCAATTCCCAGGCCAACAAACCCGAATCTACCGCTTCTTCTTTTCCTCCACCGCAATCGCTACCACCATCGTCGCTTTCTGTCGGAATAAACCCTACTTTGCATCCACCCTTAGTGTCAACGCCGCAACCACCTCCTTCTCTATCGTATGCCCCCTCGCCCTTATCCGGTACGGTGGCTGTTCCTCCGACGGCTCCGTCTTTCCGGCCGGTGCCTCTCTCAGCTCATCACTTCTCACCCATGCCCGGCACTGGCATGCTGAACCCAAGCTATTCAAACCCTGGGGTTCAGCCTCCGGGGGTTAGCTCGGTTGCGGCGCCTGCTCCTGGTATGGCAAGTGGCGGCACGGGAGCAGTTCCAGTTCCAGTGCCACAACCGATGATGGCTTATCAAGTTCCACCGGGTCAGGTTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAACGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTCTCCCTGGTGGGTTTTCTCTATCCCTATTGTTTCTAACATTTCAATTGCCAATTTTGACGCAAAGTAAAAGTTCCGCGCATGTTATGATGCCTCGGAAAGAGTTTGCAAAAATAAGTTCGGAGTCTATTAAAAATTTTCGTATGAAGGGTATCGATGACAGGATGTTTTCTCCTACAGCGTCTTGTCTCTTGATTGAATACGGTGAGAAAGGTTGGAAGGCTTCATATTGCTTAGAGAACTCCCAACTACAACTCCTTTTTTGGTATGGTCATTCATATTTGTCTGTTATTCTTGTTTGCTTTCAGCATGTTATATTGGATACTGTCCCTGGATATTTGAATTGCCAGAAGCAGACCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGAACATGCAAATTTATTTTTTTTCAATCGATCTGTGTGAATGAGTTGCTCAAAGCGTTGTGCTTCTTAAATCATAAAATTCTGCTTTTGATGGACGGGATTTTGAGAAGGCTGCAGTTCAAGAGTAAGTTTCCATTCCTATGCTGCCATCGTTTATATGCTTTGGATTTTGGTAATGGCATTTATGAATCCTCATCAATTATTCTTCCATATACTTTAAGCACCATTAGATGGTTAGATGTGAGTAGAGTTCCACGTTTCCCTTCTCCATATCCAGTTATGATTAGGACGCCTTTTCATCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCAATGCCACGACCTCCTATTCCTGGGATTCCTGGTGTGCGTCCAATCATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGTGTTACACCAGCCGAACAACCCCAAACTACTATTTATATTGGCCGAATTGCACAATCAGTGGATAATGATTTCATGCTGTCCCTTCTTCAGCTATGTGGACCAGTGAAGAGCTGGAAACGTGCCCAAAATCCTTCGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGCGTTCTTCGTGCGCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTAGTGATGACAGACATTACTTTTTTTCAACCTAGAAATGCGTTAAAAGGTACTCAAGCAACAAGAGATTATCTGAAGCGTTATGTTGAAAAGAAAGCTGAGAATTCAAAGAAACTGAAAGAAACACAAGTTTCAGAGACTAAAGAAGAAGAAGCAGCCACTACGAATGTGGCTAAAAATGAAACTTCAAAGCCCTCTGCAGAGGATTCAAAGGAAGATCACGATTCAGGGGAAAAAGATCTTGACATTGCCCGTTCTGCAGTTTTAAGCGATGAAGATAGAGATGCAGATCGTGAGGCGTCAGAAAAGCTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTTCTGACAACCGCTGGTGTCTCTGGTAACTCAAGTGTGGAACCATCTGCTAAACTGAAAGAGGGTGAAGCTGACGCTGATATTTTGAAACCTGATGCACCTGATGATAGAAATGATGATGACACAACTAGTGACCATAAACAAACTAGTGAGCGTGACAAGCCTGACACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTAGAGAAAGAGACAGGGAGAGGGATCTGAAAAGGGATAAGGAGCGGGAAGTTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGGCCGAGCGACAGTATGAAGAATGTCTCAAAGAGTGGGAATATCGAGAAAGAGAGAGAGAAAAGCAGAGGCAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGAAAGAAAGAGATATTGTATGATGAAGATGATGAGGATGACGATTCAAGAAGAAAATGGCGCAGAGGTGCTCTGGAGGAAAAGAGGAAGAAAAGGTCTAGAGAAAAGGAAGATGATTCGGTCGATAGAGAGAGAGAGGAAGGAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCTGCAGAAGCAGAAAGACCCACTGAAACTTTTATCTGGTCAGAAGATGAGTGTCAACGAGAAAACTGTTCTTGCCGAAGAATCCGCTAATGAGATTAAAGTTATGGCTTCTGAACGTGAATCTGAGCTTGACTCTAGCTGTGATAACCATTTAGGGGATGGGATCTTACAAAATGGTAGTGGTGATGAATTAAATACGATACCATCAGAGACTCGACAGAGTGGAGGCTTGCCTGCAAAAAGGTTAGGATTTGGTTTGGTGGGATCTGGAAAACGGACTGCTGTACTTTCAGTTTTTCATGAGGAGGAGGATGATGAAGCACAGAAAGAGAAAAAGATGAGGCCGCTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTACCGCCAAATTTAGCTGCAGCAGCCGAGTTTGCAAAACGTATATCTAATGTTAATTCCAAAGAAGAGAAGCCTGATGGTGAAAGGGAGCGAGGAAGGCGTTCCAGTGAAAAGTCAGGTCATAGAGATCGAAATGATGAGGATACCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGATAGGGAGCGAGACCATGTTTTGGATAAAGTAAAAACACCAGATAACAAAAAGCTTTTGGATGCGAAACAGTTGATTGATATGATTCCAAAGACGAAAGAGGAATTATTCTCATATGATATAAATTGGGCTATTTACGAAAAGGTACCGAGTCTTACTGATTTTCTTTTTCTTATTGTGCTTGTGCATAACATTAATAATACTGGAAATAAGGATAACACTGCTGTCATATCATTGACAAGAAAATATTTTTCGGTAACTTTTTCTGAAACTTTAACGCATCATTATGCTTATTTGCAGCATGCACTACATGAGAGAATGAGACCGTGGATTTCAAAAAAGATAACAGAGTTTTTGGGGGAGGAGGAAACCACTCTCGTGGATTACATAGTTTCAAGTACTCAGGAACACGTAAAGGCATCTCAGATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTCATCTTCGAAATAAAAAAGGTAGAGACTGGTCTAGCTTTCAGAACAAAAGCA
Protein sequence
VLKSLLRLFPSSLVSRAQRTPITCSSENLKDKPGSFQLPCDLFSTSMADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPLVSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQPPGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTATPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDDRMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYLNCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKSKFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMTDITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSKPSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLTTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRSRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVMASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVISLTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Homology
BLAST of Lsi04G005420 vs. ExPASy Swiss-Prot
Match:
B2RY56 (RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2)
HSP 1 Score: 106.3 bits (264), Expect = 2.6e-21
Identity = 242/936 (25.85%), Postives = 386/936 (41.24%), Query Frame = 0
Query: 462 PFHPRPP-GAMGMVPAMPRPPIPG----IPGVRPIIP---PVVRPA---VLPSVTPAEQ- 521
P RPP G + P +P P PG +P P+IP ++ PA ++P+V+ +
Sbjct: 5 PHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVGKH 64
Query: 522 --------------------PQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQNPSD 581
P TT+++G I++ + + LL CG V SWKR Q S
Sbjct: 65 LGARKDHPGLKLKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGAS- 124
Query: 582 GTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMTDITFFQPRNALKGTQATRDYLKR 641
G + FGFCE++ E LRALRLL L I ++L+ +K T+ L
Sbjct: 125 GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLL------------VKVDAKTKAQLDE 184
Query: 642 YVEKKAENSKKLKETQVS--------ETKEEEAATTNVAK-------NETSKPSAE-DSK 701
+ KK N ET + ETK + + +E + PS E DS
Sbjct: 185 WKAKKKANGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSH 244
Query: 702 EDHDSGEKDLDIAR------------------SAVLSDEDR------------------D 761
EK DI R +A+ +ED+ +
Sbjct: 245 PRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLE 304
Query: 762 ADREASEKLTNALEERLKSRPLPPPPLLTTAGVSGNSSVE-----PSAKLKEGEADADIL 821
++ EK +E+ + R E + +E E D D
Sbjct: 305 EEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD 364
Query: 822 KPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRSRRYDR-RSRERDRERDLKRDKEREVE 881
+ D + D D +++S+R+K + S ++SR +R R RER+RER+ +R++ERE E
Sbjct: 365 RTKERDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERE 424
Query: 882 RYERETERERARKEREQR--------------RKFEEAERQYEECLKEWEYRER------ 941
R ERE ERER + ++ R RK E E Y+E LK WE RER
Sbjct: 425 R-EREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREY 484
Query: 942 EREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSV 1001
E+E +R+ E+ RE KE KR KE L D DD+ DD + +R AL+++ + R +E E D
Sbjct: 485 EKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDP-KYYRGSALQKRLRDREKEMEADER 544
Query: 1002 DREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVMASERE 1061
DR+RE+ E+ E +++ E L+ + + + + E + E + E+E
Sbjct: 545 DRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKE 604
Query: 1062 SELDSSC--DNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAVLSV 1121
+ + + + +++ PS + SG G + + +
Sbjct: 605 EKREEPVEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPG------DESPCGIII 664
Query: 1122 FHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSKE 1181
HE D+ Q E+ RP + + AS PN + + +V +K
Sbjct: 665 PHENSPDQQQPEEH-RPKIGLSLKL-------GASNSPGQPNSVKRKKLP--VDSVFNKF 724
Query: 1182 EKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKKLLD 1241
E D + +R K D ++D +K T++ + +R H+
Sbjct: 725 EDEDSDDVPRKR---KLVPLDYGEDDKNATKG---TVNTEEKRKHI-------------- 784
Query: 1242 AKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVISLTR 1286
K LI+ IP K ELF+Y ++W+I + +
Sbjct: 785 -KSLIEKIPTAKPELFAYPLDWSIVDSI-------------------------------- 836
BLAST of Lsi04G005420 vs. ExPASy Swiss-Prot
Match:
P49756 (RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3)
HSP 1 Score: 92.4 bits (228), Expect = 3.9e-17
Identity = 242/940 (25.74%), Postives = 392/940 (41.70%), Query Frame = 0
Query: 462 PFHPRPP-GAMGMVPAMPRPPIPG----IPGVRPIIP---PVVRPA---VLPSVTPAEQ- 521
P RPP G + P +P P PG +P P+IP ++ PA ++P+V+ +
Sbjct: 5 PHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVGKH 64
Query: 522 --------------------PQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQNPSD 581
P TT+++G I++ + + LL CG V SWKR Q S
Sbjct: 65 LGARKDHPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGAS- 124
Query: 582 GTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMTDITFFQPRNALKGTQATRDYLKR 641
G + FGFCE++ E LRALRLL L I ++L++ T+A D K
Sbjct: 125 GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLV---------KVDAKTKAQLDEWK- 184
Query: 642 YVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSKPSAEDSKEDHDSGEKDLDIARSA 701
+KKA N ET V+ EE +++ K + E ++ S +L+
Sbjct: 185 -AKKKASNGNARPET-VTNDDEEALDEETKRRDQMIKGAIEVLIREYSS---ELNAP--- 244
Query: 702 VLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLTTAGVSGNSSVEPSAKLKEGEADA 761
S E R+ ++ + R PL P PL+T ++ ++ E
Sbjct: 245 --SQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINA---------IEMEEDKR 304
Query: 762 DILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSP------DRSRRYDRRSRERDRERDLK 821
D++ + R+ + K E+++ + +R R +RR RER+RER+ +
Sbjct: 305 DLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERERE 364
Query: 822 RDKEREVERYERETERERAR-KEREQ-------------------------RRKFEEAER 881
R+KE+E ER ERE +R+R R KER++ R K + ER
Sbjct: 365 REKEKERER-ERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRER 424
Query: 882 QYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEE 941
+ E + RERERE++R+ E+ERE+E+ER++ K+ +ED+ED RRK R E+
Sbjct: 425 EREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREK 484
Query: 942 -------------KRKKRSREKEDDSVDREREEGEIAEAKRKAEE--EQLQKQKDPLKLL 1001
+ +K++RE E ++ E E+A+ ++ +E E +D K
Sbjct: 485 EAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYY 544
Query: 1002 SGQKMSVNEKTVLAEESANEIKVMASERESELDSSCDNHLGDGILQNGSGDELNTIPSET 1061
G S +K + E E A ER+ + + + +L G D P
Sbjct: 545 RG---SALQKRLRDREKEME----ADERDRKREKEELEEIRQRLLAEGHPD-----PDAE 604
Query: 1062 RQSGGLPAKRLGFGLVGSGKRTAVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQ---- 1121
Q A+R ++ + EE++E ++EK+ + P++ E Q
Sbjct: 605 LQRMEQEAER--------RRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCL 664
Query: 1122 -----------AVQPASTGALPPNLAAAAEFAKRISNVNS-KEEKPDGERER-------- 1181
+V AS A P + I + NS +++P+ R +
Sbjct: 665 KPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHENSPDQQQPEEHRPKIGLSLKLG 724
Query: 1182 -----GRRSSEK-------SGHRDRNDEDTYRSKDENKTIDRD-RERDHVLDKVKTPDNK 1241
G+ +S K S DED+ + K + D E D K +
Sbjct: 725 ASNSPGQPNSVKRKKLPVDSVFNKFEDEDSDDVPRKRKLVPLDYGEDDKNATKGTVNTEE 784
Query: 1242 KLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVI 1286
K K LI+ IP K ELF+Y ++W+I + +
Sbjct: 785 KRKHIKSLIEKIPTAKPELFAYPLDWSIVDSI---------------------------- 841
BLAST of Lsi04G005420 vs. ExPASy TrEMBL
Match:
A0A5A7STL6 (RNA-binding protein 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00960 PE=4 SV=1)
HSP 1 Score: 1526.1 bits (3950), Expect = 0.0e+00
Identity = 912/1245 (73.25%), Postives = 926/1245 (74.38%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ AEPENPNSQ KPES ASSFPPPQSLPP+SLSVGINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VST QPP LSYAPSPLSGT AVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGM SGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIR PF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPAMIRGPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL--- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ+SETKEEEA T NVAK ETSK
Sbjct: 541 ---------GLKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTANVAKKETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKEDHDSGEKD DIA SAVLSDEDRDADREA EK+TNALEERLKSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDHDSGEKDFDIACSAVLSDEDRDADREAKEKITNALEERLKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
T VS NSSVEPSAKLK+GEAD D LKPDA DDRND+DTTSDHKQ SE DKP+TSSPDRS
Sbjct: 661 TTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSDHKQASEHDKPETSSPDRS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DRE+EE EIAEAKRKAEEEQLQK +DP KLL GQ S+NEKTV+AEES NEIKVM
Sbjct: 841 EDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVM 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESELDSSCDNH+GDGI QNGSGDELNTIPSETRQSGGLP KRLGFGLVGSGKRTAV
Sbjct: 901 ASERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN N
Sbjct: 961 PSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNAN 968
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPD ERERGRR SEKSGHRDRNDEDTYRSKDENK DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDSERERGRRPSEKSGHRDRNDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKK 968
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 968
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 968
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 968
BLAST of Lsi04G005420 vs. ExPASy TrEMBL
Match:
A0A1S3BEI5 (RNA-binding protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489014 PE=4 SV=1)
HSP 1 Score: 1526.1 bits (3950), Expect = 0.0e+00
Identity = 912/1245 (73.25%), Postives = 926/1245 (74.38%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ AEPENPNSQ KPES ASSFPPPQSLPP+SLSVGINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VST QPP LSYAPSPLSGT AVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGM SGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIR PF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPAMIRGPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL--- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ+SETKEEEA T NVAK ETSK
Sbjct: 541 ---------GLKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTANVAKKETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKEDHDSGEKD DIA SAVLSDEDRDADREA EK+TNALEERLKSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDHDSGEKDFDIACSAVLSDEDRDADREAKEKITNALEERLKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
T VS NSSVEPSAKLK+GEAD D LKPDA DDRND+DTTSDHKQ SE DKP+TSSPDRS
Sbjct: 661 TTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSDHKQASEHDKPETSSPDRS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DRE+EE EIAEAKRKAEEEQLQK +DP KLL GQ S+NEKTV+AEES NEIKVM
Sbjct: 841 EDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVM 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESELDSSCDNH+GDGI QNGSGDELNTIPSETRQSGGLP KRLGFGLVGSGKRTAV
Sbjct: 901 ASERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN N
Sbjct: 961 PSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNAN 968
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPD ERERGRR SEKSGHRDRNDEDTYRSKDENK DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDSERERGRRPSEKSGHRDRNDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKK 968
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 968
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 968
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 968
BLAST of Lsi04G005420 vs. ExPASy TrEMBL
Match:
A0A0A0KQ81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601600 PE=4 SV=1)
HSP 1 Score: 1504.6 bits (3894), Expect = 0.0e+00
Identity = 901/1245 (72.37%), Postives = 922/1245 (74.06%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ AEPENPNSQ KPES ASSFPPPQSLPP+SLSVGINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VST QPP LSYAPSPLSGT+AVPPTAPSFRPVPLSAHHFSPMPGTGM+NPSYSNPGVQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTMAVPPTAPSFRPVPLSAHHFSPMPGTGMMNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGM SGGTGAVPVPVPQPMMAYQVPPGQVPN VMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNQVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIRTPF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPGMIRTPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVP MPRPPIPGIPGVRPIIPPVVRPA+LPS+TPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPGMPRPPIPGIPGVRPIIPPVVRPAILPSITPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL--- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ SETKEEE TTNVAK ETSK
Sbjct: 541 ---------GLKGTQATRDYLKRYVEKKAENSKKLKETQASETKEEETDTTNVAKKETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKEDHDSGEKD DIA SAVLSDEDRDADREA EKLTNALEER+KSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDHDSGEKDFDIACSAVLSDEDRDADREAKEKLTNALEERMKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
T VS NSSVEPSAK K+GEAD D KPDA DDRND+DTTSDHKQ SE DKP+TSSP+RS
Sbjct: 661 TTDVSDNSSVEPSAKPKDGEADGDTSKPDAADDRNDEDTTSDHKQASEHDKPETSSPERS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DR+REE EIAEAKRKAEEEQLQK +DP KLL Q +SV+EKTV AEES EIKV+
Sbjct: 841 EDDSFDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPSQTISVSEKTVTAEESTIEIKVV 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESE+DSSCDNH+GDGILQNGSGDELNTIPSETRQSGGLP KRLGFGLVGSGKRTAV
Sbjct: 901 ASERESEIDSSCDNHIGDGILQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEA KEKKMRPLVPIDYSAEELQAVQP STGALPPNLAAAAEFAKRISNVN
Sbjct: 961 PSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPPSTGALPPNLAAAAEFAKRISNVN 968
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPD ERERGRR SEKSGHRDRNDEDT+RSKDENK DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDSERERGRRPSEKSGHRDRNDEDTHRSKDENKATDRDRERDHVLDKVKTPDNKK 968
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 968
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 968
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 968
BLAST of Lsi04G005420 vs. ExPASy TrEMBL
Match:
A0A6J1DCH4 (RNA-binding protein 25 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019228 PE=4 SV=1)
HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 875/1249 (70.06%), Postives = 912/1249 (73.02%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ A+PENPNSQ N+PES A S+PPPQSLPP+S+S+GINPTLH L
Sbjct: 1 MADSSSSPATLDSNPQVADPENPNSQTNQPESAAPSYPPPQSLPPTSISLGINPTLHSSL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VSTPQPPPSLSYAP PLSGTVAVPPTAPSFRPVPL AH FSPMP TGMLNPSY NPGVQP
Sbjct: 61 VSTPQPPPSLSYAPPPLSGTVAVPPTAPSFRPVPLPAHQFSPMPNTGMLNPSYPNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGV SVAAPAPGM SGGTGA VPVPQPMMAYQ+PPGQVPNP +RPY TMPNGFAA+PTA
Sbjct: 121 PGVGSVAAPAPGMPSGGTGA--VPVPQPMMAYQIPPGQVPNPALRPYGTMPNGFAAMPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
PQGAFP PG
Sbjct: 181 GPQGAFPPPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPR+PSPYP MIRTPF PR
Sbjct: 361 -----------------------------------------VPRYPSPYPAMIRTPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGA+GMVP MPRPPIPGIPGVRPIIPPVVRP+VLPSVTPAE+PQTTIYIGRIAQSV+ND
Sbjct: 421 PPGALGMVPGMPRPPIPGIPGVRPIIPPVVRPSVLPSVTPAEKPQTTIYIGRIAQSVEND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+P+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV-- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEA TT VAKNETSK
Sbjct: 541 ----------LKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEADTTKVAKNETSK 600
Query: 647 PSAEDSKEDHDSGEK-DLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLL 706
P EDSKEDHDSGEK D DIA SAVLSDEDRDADREASEKLTNALEERLKSRPLPPPP L
Sbjct: 601 PPVEDSKEDHDSGEKEDHDIANSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPPL 660
Query: 707 TTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDR 766
T A VSGNSS EPSAKLK+ E+DADILK DA DDRNDDDTTSD+KQTSE +KP+TSSPDR
Sbjct: 661 TAADVSGNSSAEPSAKLKDSESDADILKSDAADDRNDDDTTSDNKQTSEHEKPETSSPDR 720
Query: 767 SRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKE 826
SRRYDRRSRERDRERDLKR+KERE+ERYERETERERARKEREQRRK EEAERQYEECLKE
Sbjct: 721 SRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQRRKIEEAERQYEECLKE 780
Query: 827 WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE 886
WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE
Sbjct: 781 WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE 840
Query: 887 KEDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKV 946
KEDD VDR +EE EI EAKRK EEEQLQKQKD LKLLS Q M+VNEKTVLAEESAN+I V
Sbjct: 841 KEDDLVDRHKEEEEIVEAKRKTEEEQLQKQKDTLKLLSDQTMNVNEKTVLAEESANDI-V 900
Query: 947 MASERESELDSSCDNHLGDGILQNGSGDELNTI-PSETRQSGGLPAKRLGFGLVGSGKRT 1006
MASER+SEL+SSC+NH+GDGILQNGSGDE NT+ SETRQSGGLPAKRLGFGLVGSGKRT
Sbjct: 901 MASERDSELNSSCENHIGDGILQNGSGDESNTVLLSETRQSGGLPAKRLGFGLVGSGKRT 960
Query: 1007 AVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN 1066
AV SVFHEEEDDEAQK+KKMRPLVPIDYSAEELQAVQPASTGALPPNL AAAEFAKRISN
Sbjct: 961 AVPSVFHEEEDDEAQKDKKMRPLVPIDYSAEELQAVQPASTGALPPNLVAAAEFAKRISN 971
Query: 1067 VNSKEEKPDGERERGRRSSEKSGH--RDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTP 1126
VN+KEEKPD ERERGRRS EKS RDRNDED YR+K+ENK IDRDRERDHVLDK KTP
Sbjct: 1021 VNAKEEKPDSERERGRRSGEKSSQRDRDRNDEDAYRTKEENKAIDRDRERDHVLDKAKTP 971
Query: 1127 DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNT 1186
DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEK-------------------------- 971
Query: 1187 AVISLTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSST 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSST
Sbjct: 1141 --------------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSST 971
Query: 1247 QEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
QEHVKASQMLELLQ+ILDEEAEMFVLKMWRMLIFEIKKVETGLA R+KA
Sbjct: 1201 QEHVKASQMLELLQTILDEEAEMFVLKMWRMLIFEIKKVETGLASRSKA 971
BLAST of Lsi04G005420 vs. ExPASy TrEMBL
Match:
A0A6J1I2N2 (RNA-binding protein 25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469318 PE=4 SV=1)
HSP 1 Score: 1419.4 bits (3673), Expect = 0.0e+00
Identity = 871/1248 (69.79%), Postives = 906/1248 (72.60%), Query Frame = 0
Query: 47 MAD-SSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPP 106
MAD SSSSPATLDSNPQAAEPENPNSQANK ES ASSFPPPQSLPP+SLSVG+NPT+H P
Sbjct: 1 MADSSSSSPATLDSNPQAAEPENPNSQANKAESAASSFPPPQSLPPTSLSVGMNPTMHSP 60
Query: 107 LVSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQ 166
LVSTPQPPPSLSY P+ VPPTAPSFRPVP SAH FSPMPG GMLNP+YSN GVQ
Sbjct: 61 LVSTPQPPPSLSYVPA------GVPPTAPSFRPVPFSAHQFSPMPGAGMLNPNYSNIGVQ 120
Query: 167 PPGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPT 226
PPGV SV APAPGMASGGTGAVPVPVPQPMMAYQVPPGQ+PNPVMRPYATMPNGFAAVPT
Sbjct: 121 PPGVGSVTAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQIPNPVMRPYATMPNGFAAVPT 180
Query: 227 ATPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGID 286
ATPQGAFP+PG
Sbjct: 181 ATPQGAFPIPG------------------------------------------------- 240
Query: 287 DRMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGY 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 LNCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFK 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 SKFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHP 466
VPRFPSPY MIRTPF P
Sbjct: 361 ------------------------------------------VPRFPSPYHAMIRTPFPP 420
Query: 467 RPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDN 526
RPPGAMGMVPAMPRPP+PG+PGVRPIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSV N
Sbjct: 421 RPPGAMGMVPAMPRPPVPGVPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVGN 480
Query: 527 DFMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVM 586
DFMLSLLQLCGPVKSWKRAQ+P+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV
Sbjct: 481 DFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV- 540
Query: 587 TDITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETS 646
LKGTQATRDYLKRYVEKKAENSKK +ET++SETK EE T NVAKNETS
Sbjct: 541 -----------LKGTQATRDYLKRYVEKKAENSKKQEETKLSETKVEETDTENVAKNETS 600
Query: 647 KPSAEDSKEDHDSGEK-DLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPL 706
KP AEDSKED DSGEK D IA SAVLSDEDRDADRE SEKLTNALEERLKSRPLPPPPL
Sbjct: 601 KPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDADREVSEKLTNALEERLKSRPLPPPPL 660
Query: 707 LTTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPD 766
LT VSGNSS EPS K+K+GEAD+DILK DA +DRNDDDTTSD+K TSE DKP+TSSPD
Sbjct: 661 LTATDVSGNSSAEPSVKMKDGEADSDILKSDAAEDRNDDDTTSDNKLTSEHDKPETSSPD 720
Query: 767 RSRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLK 826
RSRRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEE+ERQYEECLK
Sbjct: 721 RSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEECLK 780
Query: 827 EWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSR 886
EWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSR
Sbjct: 781 EWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSR 840
Query: 887 EKEDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIK 946
EKEDDSVDR++EE EIAEAKRKAEEEQ KQKD LK SGQ SV+EKTVLAEESANE++
Sbjct: 841 EKEDDSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLKTQSGQMTSVDEKTVLAEESANEVE 900
Query: 947 VMASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRT 1006
VM SER+ ELDSSCDN+ GDGILQNGSGDELNT TRQSGGLPAKRLGFGLVGSGKRT
Sbjct: 901 VMDSERDPELDSSCDNYTGDGILQNGSGDELNT----TRQSGGLPAKRLGFGLVGSGKRT 960
Query: 1007 AVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN 1066
AV SVFH EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAK ISN
Sbjct: 961 AVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKHISN 962
Query: 1067 VNSKEEKPDGERERGRRSSEKSGH-RDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPD 1126
VNSKEEKPD ERE+GRRS+EKS RDRNDE+ YRSKDENKTIDRDRER+HVLDKVK PD
Sbjct: 1021 VNSKEEKPDSEREQGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRDREREHVLDKVKIPD 962
Query: 1127 NKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTA 1186
NKKLLDAKQLIDMIPKTKEELFSY+INWAIYEK
Sbjct: 1081 NKKLLDAKQLIDMIPKTKEELFSYEINWAIYEK--------------------------- 962
Query: 1187 VISLTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQ 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQ
Sbjct: 1141 -------------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQ 962
Query: 1247 EHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
EHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 EHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 962
BLAST of Lsi04G005420 vs. NCBI nr
Match:
XP_038893392.1 (RNA-binding protein 25 isoform X1 [Benincasa hispida])
HSP 1 Score: 1560.0 bits (4038), Expect = 0.0e+00
Identity = 927/1245 (74.46%), Postives = 946/1245 (75.98%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQAAEPENPNSQANKPES ASSFPPPQSLPP+SLS+GINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQAAEPENPNSQANKPESAASSFPPPQSLPPTSLSIGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VSTPQP PSLSYAPSPLSGTVAVPPTAPSFRPVPL AHHFSPMPG+GMLNPSYSNPGVQP
Sbjct: 61 VSTPQPHPSLSYAPSPLSGTVAVPPTAPSFRPVPLPAHHFSPMPGSGMLNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGMASGGT AVPVPVPQP MAYQVPPGQVPNPVMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMASGGTVAVPVPVPQPRMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIRTPF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPAMIRTPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV-- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ+SETKEEEA TTNVAKNETSK
Sbjct: 541 ----------LKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTTNVAKNETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKED+DSGEKDLDIA SAVLSDEDRDADREA+EKLTNALEERLKSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDNDSGEKDLDIACSAVLSDEDRDADREATEKLTNALEERLKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
TA VSGNSS EPSAKLK+GEAD + LKPDA DDRND+DTTSDHKQTSE DKP+TSSPDRS
Sbjct: 661 TADVSGNSSAEPSAKLKDGEADGNTLKPDAADDRNDEDTTSDHKQTSEHDKPETSSPDRS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DR++EE EIAEAKRKAEEEQLQKQKDPLKLL GQ MSV EKTVLAEESANE+KVM
Sbjct: 841 EDDSFDRQKEEEEIAEAKRKAEEEQLQKQKDPLKLLPGQTMSVIEKTVLAEESANEVKVM 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESE DSSCDNH+GDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV
Sbjct: 901 ASERESEPDSSCDNHIGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTG+LPPNLAAAAEFAKR+S VN
Sbjct: 961 RSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGSLPPNLAAAAEFAKRLSTVN 970
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKT DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTTDRDRERDHVLDKVKTPDNKK 970
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 970
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 970
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 970
BLAST of Lsi04G005420 vs. NCBI nr
Match:
KAG6601496.1 (RNA-binding protein 25, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1551.6 bits (4016), Expect = 0.0e+00
Identity = 932/1250 (74.56%), Postives = 974/1250 (77.92%), Query Frame = 0
Query: 47 MAD-SSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPP 106
MAD SSSSPATLDSNPQAAEPENPNSQANK ES ASSFPPPQSLPP+SLSVG+NPT+H P
Sbjct: 1 MADSSSSSPATLDSNPQAAEPENPNSQANKAESAASSFPPPQSLPPTSLSVGMNPTMHSP 60
Query: 107 LVSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQ 166
LVSTPQPPPSLSY VPPTAPSFRPVP SAHHFSPMPGTGMLNP+YSN GVQ
Sbjct: 61 LVSTPQPPPSLSYV------AAGVPPTAPSFRPVPFSAHHFSPMPGTGMLNPNYSNIGVQ 120
Query: 167 PPGVSSVAAPAPGMASGGTGA--VPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAV 226
PPGV SVA PAPGMASG TGA VPVPVPQPMMAYQVPPGQ+PNPVMRPYATMPNGFAAV
Sbjct: 121 PPGVGSVAVPAPGMASGATGAVPVPVPVPQPMMAYQVPPGQIPNPVMRPYATMPNGFAAV 180
Query: 227 PTATPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKG 286
PTATPQGAFP+P
Sbjct: 181 PTATPQGAFPIP------------------------------------------------ 240
Query: 287 IDDRMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVP 346
ASCLLIEYGEKGWKASYCLENSQLQLLFW ++LV VILDT P
Sbjct: 241 ---------ASCLLIEYGEKGWKASYCLENSQLQLLFW-------ILLV----VILDTAP 300
Query: 347 GYLNCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQ 406
GYLNCQKQ MLAPECSFALFLR
Sbjct: 301 GYLNCQKQIMLAPECSFALFLR-------------------------------------- 360
Query: 407 FKSKFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPF 466
L H G+ + ++II + I + + VPRFPSPY MIRTPF
Sbjct: 361 -------LSMH-----SAGDSFHCYAAIIYMLWI-VIFFFTCAGVPRFPSPYHAMIRTPF 420
Query: 467 HPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSV 526
PRPPGAMGMVPAMPRPP+PG+PGV PIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSV
Sbjct: 421 PPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSV 480
Query: 527 DNDFMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL 586
NDFMLSLLQLCGPVKSWKRAQ+P+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 GNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL 540
Query: 587 VMTDITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNE 646
V LKGTQATRDYLKRYVEKKAENSKK +ETQ+SETK EE+ T NVAKNE
Sbjct: 541 V------------LKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVEESDTANVAKNE 600
Query: 647 TSKPSAEDSKEDHDSGEK-DLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPP 706
TSKP AEDSKED DSGEK D IA SAVLSDEDRDADRE SEKLTNALEERLKSRPLPPP
Sbjct: 601 TSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDADREVSEKLTNALEERLKSRPLPPP 660
Query: 707 PLLTTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSS 766
PLLT VSGNSS EPS K+K+GEAD+DIL+ DA +DRNDDDTTSD+K TSE DKP+TSS
Sbjct: 661 PLLTATDVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTSEHDKPETSS 720
Query: 767 PDRSRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEEC 826
PDRSRRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEE+ERQYEEC
Sbjct: 721 PDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEEC 780
Query: 827 LKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKR 886
LKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKR
Sbjct: 781 LKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKR 840
Query: 887 SREKEDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANE 946
SREKEDDSVDR++EE EIAEAKRKAEEEQ KQKD L SGQ SV+EKTVLAEESANE
Sbjct: 841 SREKEDDSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLNTQSGQMTSVDEKTVLAEESANE 900
Query: 947 IKVMASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGK 1006
++VM SER+ ELD SCDN+ GDGILQNGSGDELNT TRQSGGLPAKRLGFGLVGSGK
Sbjct: 901 VEVMDSERDPELDCSCDNYTGDGILQNGSGDELNT----TRQSGGLPAKRLGFGLVGSGK 960
Query: 1007 RTAVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRI 1066
RTAV SVFH EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRI
Sbjct: 961 RTAVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRI 1020
Query: 1067 SNVNSKEEKPDGERERGRRSSEKSGH-RDRNDEDTYRSKDENKTIDRDRERDHVLDKVKT 1126
SNVNSKEEKPD ERERGRRS+EKS RDRNDE+ YRSKDENKTIDRDRER+ VLDKVK
Sbjct: 1021 SNVNSKEEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRDREREPVLDKVKI 1056
Query: 1127 PDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDN 1186
PDNKKLLDAKQLIDMIPKTKEELFSYDINW IYEK
Sbjct: 1081 PDNKKLLDAKQLIDMIPKTKEELFSYDINWTIYEK------------------------- 1056
Query: 1187 TAVISLTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSS 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSS
Sbjct: 1141 ---------------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSS 1056
Query: 1247 TQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
TQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 TQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1056
BLAST of Lsi04G005420 vs. NCBI nr
Match:
XP_008446214.1 (PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo] >KAA0034320.1 RNA-binding protein 25 isoform X1 [Cucumis melo var. makuwa] >TYK15599.1 RNA-binding protein 25 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 1526.1 bits (3950), Expect = 0.0e+00
Identity = 912/1245 (73.25%), Postives = 926/1245 (74.38%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ AEPENPNSQ KPES ASSFPPPQSLPP+SLSVGINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VST QPP LSYAPSPLSGT AVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTAAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGM SGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIR PF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPAMIRGPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL--- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ+SETKEEEA T NVAK ETSK
Sbjct: 541 ---------GLKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTANVAKKETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKEDHDSGEKD DIA SAVLSDEDRDADREA EK+TNALEERLKSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDHDSGEKDFDIACSAVLSDEDRDADREAKEKITNALEERLKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
T VS NSSVEPSAKLK+GEAD D LKPDA DDRND+DTTSDHKQ SE DKP+TSSPDRS
Sbjct: 661 TTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSDHKQASEHDKPETSSPDRS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DRE+EE EIAEAKRKAEEEQLQK +DP KLL GQ S+NEKTV+AEES NEIKVM
Sbjct: 841 EDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVM 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESELDSSCDNH+GDGI QNGSGDELNTIPSETRQSGGLP KRLGFGLVGSGKRTAV
Sbjct: 901 ASERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN N
Sbjct: 961 PSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNAN 968
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPD ERERGRR SEKSGHRDRNDEDTYRSKDENK DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDSERERGRRPSEKSGHRDRNDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKK 968
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 968
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 968
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 968
BLAST of Lsi04G005420 vs. NCBI nr
Match:
XP_011655629.1 (RNA-binding protein 25 isoform X1 [Cucumis sativus])
HSP 1 Score: 1504.6 bits (3894), Expect = 0.0e+00
Identity = 901/1245 (72.37%), Postives = 922/1245 (74.06%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ AEPENPNSQ KPES ASSFPPPQSLPP+SLSVGINPTLHPPL
Sbjct: 1 MADSSSSPATLDSNPQPAEPENPNSQPIKPESAASSFPPPQSLPPTSLSVGINPTLHPPL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VST QPP LSYAPSPLSGT+AVPPTAPSFRPVPLSAHHFSPMPGTGM+NPSYSNPGVQP
Sbjct: 61 VSTLQPP--LSYAPSPLSGTMAVPPTAPSFRPVPLSAHHFSPMPGTGMMNPSYSNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGVSSVAAPAPGM SGGTGAVPVPVPQPMMAYQVPPGQVPN VMRPYATMPNGFAAVPTA
Sbjct: 121 PGVSSVAAPAPGMVSGGTGAVPVPVPQPMMAYQVPPGQVPNQVMRPYATMPNGFAAVPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
TPQGAFPLPG
Sbjct: 181 TPQGAFPLPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPRFPSPYP MIRTPF PR
Sbjct: 361 -----------------------------------------VPRFPSPYPGMIRTPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGAMGMVP MPRPPIPGIPGVRPIIPPVVRPA+LPS+TPAE+PQTTIYIGRIAQSVDND
Sbjct: 421 PPGAMGMVPGMPRPPIPGIPGVRPIIPPVVRPAILPSITPAEKPQTTIYIGRIAQSVDND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+PSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL--- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQ SETKEEE TTNVAK ETSK
Sbjct: 541 ---------GLKGTQATRDYLKRYVEKKAENSKKLKETQASETKEEETDTTNVAKKETSK 600
Query: 647 PSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLLT 706
PSAEDSKEDHDSGEKD DIA SAVLSDEDRDADREA EKLTNALEER+KSRPLPPPPLLT
Sbjct: 601 PSAEDSKEDHDSGEKDFDIACSAVLSDEDRDADREAKEKLTNALEERMKSRPLPPPPLLT 660
Query: 707 TAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDRS 766
T VS NSSVEPSAK K+GEAD D KPDA DDRND+DTTSDHKQ SE DKP+TSSP+RS
Sbjct: 661 TTDVSDNSSVEPSAKPKDGEADGDTSKPDAADDRNDEDTTSDHKQASEHDKPETSSPERS 720
Query: 767 RRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKEW 826
RRYDRRSRERDRERDLKRDKERE+ERYERETERERARKEREQRRKFEEAERQYEECLKEW
Sbjct: 721 RRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEW 780
Query: 827 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 886
EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK
Sbjct: 781 EYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREK 840
Query: 887 EDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKVM 946
EDDS DR+REE EIAEAKRKAEEEQLQK +DP KLL Q +SV+EKTV AEES EIKV+
Sbjct: 841 EDDSFDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPSQTISVSEKTVTAEESTIEIKVV 900
Query: 947 ASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSGGLPAKRLGFGLVGSGKRTAV 1006
ASERESE+DSSCDNH+GDGILQNGSGDELNTIPSETRQSGGLP KRLGFGLVGSGKRTAV
Sbjct: 901 ASERESEIDSSCDNHIGDGILQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAV 960
Query: 1007 LSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVN 1066
SVFHEEEDDEA KEKKMRPLVPIDYSAEELQAVQP STGALPPNLAAAAEFAKRISNVN
Sbjct: 961 PSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPPSTGALPPNLAAAAEFAKRISNVN 968
Query: 1067 SKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTPDNKK 1126
SKEEKPD ERERGRR SEKSGHRDRNDEDT+RSKDENK DRDRERDHVLDKVKTPDNKK
Sbjct: 1021 SKEEKPDSERERGRRPSEKSGHRDRNDEDTHRSKDENKATDRDRERDHVLDKVKTPDNKK 968
Query: 1127 LLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNTAVIS 1186
LLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 LLDAKQLIDMIPKTKEELFSYDINWAIYEK------------------------------ 968
Query: 1187 LTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV
Sbjct: 1141 ----------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHV 968
Query: 1247 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 1201 KASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 968
BLAST of Lsi04G005420 vs. NCBI nr
Match:
XP_022151264.1 (RNA-binding protein 25 isoform X1 [Momordica charantia])
HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 875/1249 (70.06%), Postives = 912/1249 (73.02%), Query Frame = 0
Query: 47 MADSSSSPATLDSNPQAAEPENPNSQANKPESTASSFPPPQSLPPSSLSVGINPTLHPPL 106
MADSSSSPATLDSNPQ A+PENPNSQ N+PES A S+PPPQSLPP+S+S+GINPTLH L
Sbjct: 1 MADSSSSPATLDSNPQVADPENPNSQTNQPESAAPSYPPPQSLPPTSISLGINPTLHSSL 60
Query: 107 VSTPQPPPSLSYAPSPLSGTVAVPPTAPSFRPVPLSAHHFSPMPGTGMLNPSYSNPGVQP 166
VSTPQPPPSLSYAP PLSGTVAVPPTAPSFRPVPL AH FSPMP TGMLNPSY NPGVQP
Sbjct: 61 VSTPQPPPSLSYAPPPLSGTVAVPPTAPSFRPVPLPAHQFSPMPNTGMLNPSYPNPGVQP 120
Query: 167 PGVSSVAAPAPGMASGGTGAVPVPVPQPMMAYQVPPGQVPNPVMRPYATMPNGFAAVPTA 226
PGV SVAAPAPGM SGGTGA VPVPQPMMAYQ+PPGQVPNP +RPY TMPNGFAA+PTA
Sbjct: 121 PGVGSVAAPAPGMPSGGTGA--VPVPQPMMAYQIPPGQVPNPALRPYGTMPNGFAAMPTA 180
Query: 227 TPQGAFPLPGGFSLSLLFLTFQLPILTQSKSSAHVMMPRKEFAKISSESIKNFRMKGIDD 286
PQGAFP PG
Sbjct: 181 GPQGAFPPPG-------------------------------------------------- 240
Query: 287 RMFSPTASCLLIEYGEKGWKASYCLENSQLQLLFWYGHSYLSVILVCFQHVILDTVPGYL 346
Sbjct: 241 ------------------------------------------------------------ 300
Query: 347 NCQKQTMLAPECSFALFLRTCKFIFFQSICVNELLKALCFLNHKILLLMDGILRRLQFKS 406
Sbjct: 301 ------------------------------------------------------------ 360
Query: 407 KFPFLCCHRLYALDFGNGIYESSSIILPYTLSTIRWLDVSRVPRFPSPYPVMIRTPFHPR 466
VPR+PSPYP MIRTPF PR
Sbjct: 361 -----------------------------------------VPRYPSPYPAMIRTPFPPR 420
Query: 467 PPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQPQTTIYIGRIAQSVDND 526
PPGA+GMVP MPRPPIPGIPGVRPIIPPVVRP+VLPSVTPAE+PQTTIYIGRIAQSV+ND
Sbjct: 421 PPGALGMVPGMPRPPIPGIPGVRPIIPPVVRPSVLPSVTPAEKPQTTIYIGRIAQSVEND 480
Query: 527 FMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVMT 586
FMLSLLQLCGPVKSWKRAQ+P+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV
Sbjct: 481 FMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELV-- 540
Query: 587 DITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEAATTNVAKNETSK 646
LKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEA TT VAKNETSK
Sbjct: 541 ----------LKGTQATRDYLKRYVEKKAENSKKLKETQVSETKEEEADTTKVAKNETSK 600
Query: 647 PSAEDSKEDHDSGEK-DLDIARSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPLL 706
P EDSKEDHDSGEK D DIA SAVLSDEDRDADREASEKLTNALEERLKSRPLPPPP L
Sbjct: 601 PPVEDSKEDHDSGEKEDHDIANSAVLSDEDRDADREASEKLTNALEERLKSRPLPPPPPL 660
Query: 707 TTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDHKQTSERDKPDTSSPDR 766
T A VSGNSS EPSAKLK+ E+DADILK DA DDRNDDDTTSD+KQTSE +KP+TSSPDR
Sbjct: 661 TAADVSGNSSAEPSAKLKDSESDADILKSDAADDRNDDDTTSDNKQTSEHEKPETSSPDR 720
Query: 767 SRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQRRKFEEAERQYEECLKE 826
SRRYDRRSRERDRERDLKR+KERE+ERYERETERERARKEREQRRK EEAERQYEECLKE
Sbjct: 721 SRRYDRRSRERDRERDLKREKEREIERYERETERERARKEREQRRKIEEAERQYEECLKE 780
Query: 827 WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE 886
WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE
Sbjct: 781 WEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSRE 840
Query: 887 KEDDSVDREREEGEIAEAKRKAEEEQLQKQKDPLKLLSGQKMSVNEKTVLAEESANEIKV 946
KEDD VDR +EE EI EAKRK EEEQLQKQKD LKLLS Q M+VNEKTVLAEESAN+I V
Sbjct: 841 KEDDLVDRHKEEEEIVEAKRKTEEEQLQKQKDTLKLLSDQTMNVNEKTVLAEESANDI-V 900
Query: 947 MASERESELDSSCDNHLGDGILQNGSGDELNTI-PSETRQSGGLPAKRLGFGLVGSGKRT 1006
MASER+SEL+SSC+NH+GDGILQNGSGDE NT+ SETRQSGGLPAKRLGFGLVGSGKRT
Sbjct: 901 MASERDSELNSSCENHIGDGILQNGSGDESNTVLLSETRQSGGLPAKRLGFGLVGSGKRT 960
Query: 1007 AVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN 1066
AV SVFHEEEDDEAQK+KKMRPLVPIDYSAEELQAVQPASTGALPPNL AAAEFAKRISN
Sbjct: 961 AVPSVFHEEEDDEAQKDKKMRPLVPIDYSAEELQAVQPASTGALPPNLVAAAEFAKRISN 971
Query: 1067 VNSKEEKPDGERERGRRSSEKSGH--RDRNDEDTYRSKDENKTIDRDRERDHVLDKVKTP 1126
VN+KEEKPD ERERGRRS EKS RDRNDED YR+K+ENK IDRDRERDHVLDK KTP
Sbjct: 1021 VNAKEEKPDSERERGRRSGEKSSQRDRDRNDEDAYRTKEENKAIDRDRERDHVLDKAKTP 971
Query: 1127 DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVPSLTDFLFLIVLVHNINNTGNKDNT 1186
DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEK
Sbjct: 1081 DNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEK-------------------------- 971
Query: 1187 AVISLTRKYFSVTFSETLTHHYAYLQHALHERMRPWISKKITEFLGEEETTLVDYIVSST 1246
HALHERMRPWISKKITEFLGEEETTLVDYIVSST
Sbjct: 1141 --------------------------HALHERMRPWISKKITEFLGEEETTLVDYIVSST 971
Query: 1247 QEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1292
QEHVKASQMLELLQ+ILDEEAEMFVLKMWRMLIFEIKKVETGLA R+KA
Sbjct: 1201 QEHVKASQMLELLQTILDEEAEMFVLKMWRMLIFEIKKVETGLASRSKA 971
BLAST of Lsi04G005420 vs. TAIR 10
Match:
AT1G60200.1 (splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein )
HSP 1 Score: 663.3 bits (1710), Expect = 4.0e-190
Identity = 446/853 (52.29%), Postives = 574/853 (67.29%), Query Frame = 0
Query: 450 RFPSPYPVMIRTPFHPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEQ 509
R+PSPYP M+R F RPPG +G V PRP IPG+PG+RP++PP+VRPA LP VTPAE+
Sbjct: 142 RYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGLRPVMPPMVRPASLPFVTPAEK 201
Query: 510 PQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQNPSDGTPRTFGFCEFESAEGVLRA 569
PQTTIYIG+IA +V+NDFM+S+L+ CG VKS RA++P+ P+ FGF EFESAEG+LRA
Sbjct: 202 PQTTIYIGKIA-TVENDFMMSILEFCGHVKSCLRAEDPTTKKPKGFGFYEFESAEGILRA 261
Query: 570 LRLLTKLNIDGQELVMTDITFFQPRNALKGTQATRDYLKRYVEKKAENSKKLKETQVSET 629
+RLLT+ IDGQEL+ + QAT++YL +YVEKK E +KK KE+Q T
Sbjct: 262 IRLLTQRTIDGQELL------------VNVNQATKEYLLKYVEKKIETAKKAKESQ--GT 321
Query: 630 KEEEAATTNVAKNETSKPSAEDSKEDHDSGEKDLDIARSAVLSDEDRDADREASEKLTNA 689
KE +A +++ E K+ ++++DIA SAVL+DE+R+ADREA EK+ A
Sbjct: 322 KENQAEGPESEQDKLESADNETGKDGESKIKENIDIANSAVLTDEEREADREAMEKIETA 381
Query: 690 LEERLKSRPLPPPPLLTTAGVSGNSSVEPSAKLKEGEADADILKPDAPDDRNDDDTTSDH 749
+EERLKS PLPPPP G S +E + K K+G+++ D+ + DA ND +T+ +H
Sbjct: 382 IEERLKSNPLPPPPPPPADG----SGMEFAFKSKDGDSNTDVARSDAA--ANDVETSGEH 441
Query: 750 KQTSERDKPDTSSPDRSRRYDRRSRERDRERDLKRDKEREVERYERETERERARKEREQR 809
++PDTSSPD S+R DRRSRER +KE+E++RYERE ERER+RKEREQR
Sbjct: 442 ------NRPDTSSPDWSKRNDRRSRERG-------EKEQEMDRYEREAERERSRKEREQR 501
Query: 810 RKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDE--DDDSR 869
RK E+AER Y+ L++WE RERE+EK+RQYEKE+EKEKERKRKKEI Y+E++E DDDSR
Sbjct: 502 RKLEDAERAYQTRLRQWERREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEEDDDDSR 561
Query: 870 RKWRRGALEEKRKKRSREKEDDSVDREREEGEIAEAKRKAEEEQLQKQK-DPLKLLSGQK 929
R+W R AL+E+R+++ REKEDD DR +EE E+AEAKR AEE+ LQ+Q+ D L++LSGQ
Sbjct: 562 RRWHRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALRILSGQ- 621
Query: 930 MSVNEKTVLAEESANEIKVMASERESELDSSCDNHLGDGILQNGSGDELNTIPSETRQSG 989
++ +TV N+ K + S + H +NGSG+E I + +
Sbjct: 622 AAIGSETVQTSPIENDHKATL----QTVGESANEHHAADFEENGSGNESMAIDNNSGSEA 681
Query: 990 GLPAKRLGFGLVGSGKRTAVLSVFHEEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTG 1049
P+K+LGFGLVGSGKRT+V SVF+EE++DEA+K KKM+PLVPIDYS EE +AV +G
Sbjct: 682 HAPSKKLGFGLVGSGKRTSVPSVFYEEDEDEARKAKKMKPLVPIDYSTEEQEAVAHGGSG 741
Query: 1050 ALPPNLAAAAEFAKRISNVNSKEEKPDGERERGRRSSEKSGHRDRNDEDTYRSKDENKTI 1109
PP+LA AAEFAKRIS+ N KEE + E++R RRS +K+ HRDR E R +D ++
Sbjct: 742 NTPPHLALAAEFAKRISSTNPKEETIETEKQRSRRSHDKASHRDRERE---RERDRDRDR 801
Query: 1110 DRDRERDH--------VLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKVP 1169
RDR H K K D K LDAKQLID IPKTKE+LFSY+INWA+Y+K
Sbjct: 802 VRDRGDGHSGPTKDAKESGKAKIIDT-KFLDAKQLIDTIPKTKEDLFSYEINWAMYDK-- 861
Query: 1170 SLTDFLFLIVLVHNINNTGNKDNTAVISLTRKYFSVTFSETLTHHYAYLQHALHERMRPW 1229
H +HERMRPW
Sbjct: 862 --------------------------------------------------HQVHERMRPW 899
Query: 1230 ISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEI 1289
ISKKI EFLGEEE TLVD+IVS+TQ+HV+ASQMLELLQSILDEEAEMFVLKMWRMLIFEI
Sbjct: 922 ISKKIMEFLGEEEATLVDFIVSNTQQHVQASQMLELLQSILDEEAEMFVLKMWRMLIFEI 899
Query: 1290 KKVETGLAFRTKA 1292
K+VE G+ ++KA
Sbjct: 982 KRVEAGVPVKSKA 899
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
B2RY56 | 2.6e-21 | 25.85 | RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 | [more] |
P49756 | 3.9e-17 | 25.74 | RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7STL6 | 0.0e+00 | 73.25 | RNA-binding protein 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S3BEI5 | 0.0e+00 | 73.25 | RNA-binding protein 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489014 PE=4 S... | [more] |
A0A0A0KQ81 | 0.0e+00 | 72.37 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601600 PE=4 SV=1 | [more] |
A0A6J1DCH4 | 0.0e+00 | 70.06 | RNA-binding protein 25 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019228... | [more] |
A0A6J1I2N2 | 0.0e+00 | 69.79 | RNA-binding protein 25-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114693... | [more] |
Match Name | E-value | Identity | Description | |
XP_038893392.1 | 0.0e+00 | 74.46 | RNA-binding protein 25 isoform X1 [Benincasa hispida] | [more] |
KAG6601496.1 | 0.0e+00 | 74.56 | RNA-binding protein 25, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_008446214.1 | 0.0e+00 | 73.25 | PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo] >KAA0034320.1 RNA-bi... | [more] |
XP_011655629.1 | 0.0e+00 | 72.37 | RNA-binding protein 25 isoform X1 [Cucumis sativus] | [more] |
XP_022151264.1 | 0.0e+00 | 70.06 | RNA-binding protein 25 isoform X1 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
AT1G60200.1 | 4.0e-190 | 52.29 | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-cont... | [more] |