Lsi04G005120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G005120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA polymerase
Location	chr04: 4760222 .. 4765156 (+)
RNA-Seq Expression	Lsi04G005120
Synteny	Lsi04G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCTCGTGCAGAAGAAGCTTTAATGGCGCCAAAACGAAGGAAAACCCAAAATCTTTCTGAGGATCCACATGGAATGTTTGCAGGGATGGTTGTCTTCTTAGTGGAAAAGGGGGTGCAAGCCCGCCGTTTGCAGGTTTTACATTTCATTATCTTTCTCTGCAACTTTGTATTTCAATCAATTTAAAAGTCGTAATTTGGGTATTGGTTTTGTGGTTGAAGATTTGGAAACAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGGTGAGTCCTGTTTTTTTTGTCTGAAGCGTTCATTGATGGTAATTACAAATGTATATTCGTATATGGGTTCTGACACTGATGAACTTTGAGGCGATCGTTTGTGAATGATCATTGAAGTTTAAAGTGGTTTTTCTGAAGTGCATATAAGAAAAACTTGCATTCCTTTCTGGGGTTTTTTAAATTTATGAATTAGGCTGATTTCTGCACATTTTTAGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACGTAAGTTTCTTTGATCGCCAATTCAAAGCTTGATGTTGAAATTTGTTTGTCCTGCTTTAGTTGTGAATTTGCTCATCTGTTTATAAATTAGGAATGTTTCATTGTAGACTTGTGGCTTGACCATGGAATTTTCTAGAAGTAGCTTCCAGTTTTCTTTGGACTGCTCACATCTGAATTAATCAGTGTGTTCTAATAAGGTGAAAGTTTTGCAGACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGGTGAGAATGGCATCCTTCAAACTACTTGATTGTTCCTGTTTCCACACTTAAATTTCTGATGGCTTGTCTTCTTTATACTTCAAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATGTGAGTGAAATGACTGCAGTTCGCTCTTTATTTTTCTCTTGAGGCATTGCATTATGTTGAATATTGCTTTTATTCACTCCAGTTCGCTCTTTCTTTTGGGTGGAATATGGTAATCTTTGTACTTATACAGTATATGGCCTCATAAGTTACCTGCAATCAATTTGTTTGTTCATAATATCATTCCCATAAAACCACTTGTCAGGAGTTAGGACTGGCCTTTTTTTGCTAGGTTAATTGCGAAACTTAGATACTTCCACCTCTGCAGGACTTATACAAAATCCATCTCAGCATGGGAGGATAGGACATGTCCTTGGGTGAATAATATGGTCCTAAATGCTTTGCAATTTGTATATGAATTATAATGTGGCTACAAAGAACTGTGTACACTATAAACTTCTATCTGAATGGATTGATTACAGAAGATTATTGTGCTTGCAGATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTGTTTGCAGGTTTTTAAGAAAACCGCAGACCTTCCACTCTGATAAATATTTTTATTTTCATAAACATGCTTGTTCTTCTAGGTTGCAATGATTGATGCATGTATTTCTCTTTTTCCTTGTTTAAATGTTATAATGTGTTTTTAACCATTATAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTCGGCTGCTTTACTCTTGTGGATTTTGCAACAGTAACTGATCTTTTCAGTAAATATGTTCTCAGATTTCTGAAATCCATCTGGTTTGATAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTGAGAACTGAACACCTCCTTGAAATCTGTATCTAAATAATATGGTTATTTGCTGATATTGTATTTGTGCTTGTACTTTCACGTGTTAATGCTATTATATCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCTCTCTTTGCTTTAGGTTGATATTCTATGTGGAGGATCATTTCGGCGAGGGAAGTTGTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGGTTTCAGAGATTGCCCCTCGCTTTATTCACTTCTGTATTAGTACTTTTAAATCTTGTTTGAGTTGAATGTCCTGACTCTGATTGTGAAATGGGAAGATAAAGCAGGTCAATTGAGTGCATGTCCTGGAGCATCAAATTTTGGATTAAAAAATTAAATGGTATAAGCATGGGTTAAGGAGTTAGTTTTTCATCTCACCGTAAAGATCTCATTGCATTCGATTCCATTCCAATTGAAAGCTCTATGCTAGTTTTTGTATCAATATAATGCTACTGTCAGACTGAACCACTGTCCTGCAATTTGATTTTACATTTCTGATTTGGTTCATTTTCTTTATAGTTCCTTGAGAGTGTTATTTTCTCTGTGATTCCAGCCATAGAGGTTTCCTACCAAAATATGTGAAGCATTTAAAGGACATGAAGTTTTTAAGGGAGGATCTGATATTCAGCACGCATAGTGAGGAGGTCTAATTACCATTCCCCTCTGTTTAAACGGTTCCAAGATGCCATGATAGCTTTTTCTCAATCCCTTTGTTTATTTTCACTGTGGAACCATGAACAGGGAACCGATTCTGGTGTTGACACGTATTTCGGCCTTTGCACATACCCTGGAAGAGAATTGCGACACCGAATAGATCTTAAGGCATAAGTCCTCTTATTTCTAATCTGATCCTTCTTTGGCCACTTCTTATTTAGAATAGAATAGAAGGTTTTGTTACAAAAGTAGTGCTAACAGAACCTTATCCATGTTCAGCTAAGAACTGAAGTGGATGGTAAAAGAAACTCATGCCTGCTAATAAAATATGTCTGTTAGTTATGTTCATTCTTATTCTTTGGTGTTTAGGGTGGTTGTGTCTTAATCTGAATGGTACTGACGATGCGTGATTTCTTGGACATTAGTTTCTCTTATCACCTTATGATATAAGCTATGTATTAAACTCTTGTAGGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGGTATGGTCGTCTGTAGCTAAATCTATCTGTGTATTTCAACTAGTTTTCAACTTTGATTTGGTTGTGTGAGTGATAAGTAATTGAGATTATGTTTACAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGGTAATGAACTTAACTTGGCTGTGAAGGAATATGGCCTTCAAATACAGGGCTGTCCCTAACTCCTTTCTTGTTGGTTATGCTGCAGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGATTCATCCTTTTTTCTCCCTTTTTTTCCCCCTTTATTTTCCCTAGTTTCTAATGTACATTAGAAAAGTATCAAAGCCAGTGAACTCTTAAAAGTAGTTTCTTTTTTAGGTACTCTTGGAAATATTTGTTCATAATATTAAAATAATAATAAATTCTCTTATAGTTC

mRNA sequence

TCGTCTCGTGCAGAAGAAGCTTTAATGGCGCCAAAACGAAGGAAAACCCAAAATCTTTCTGAGGATCCACATGGAATGTTTGCAGGGATGGTTGTCTTCTTAGTGGAAAAGGGGGTGCAAGCCCGCCGTTTGCAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTTGATATTCTATGTGGAGGATCATTTCGGCGAGGGAAGTTGTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGGTTTCAGAGATTGCCCCTCGCTTTATTCACTTCTGTATTAGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGATTCATCCTTTTTTCTCCCTTTTTTTCCCCCTTTATTTTCCCTAGTTTCTAATGTACATTAGAAAAGTATCAAAGCCAGTGAACTCTTAAAAGTAGTTTCTTTTTTAGGTACTCTTGGAAATATTTGTTCATAATATTAAAATAATAATAAATTCTCTTATAGTTC

Coding sequence (CDS)

ATGGCGCCAAAACGAAGGAAAACCCAAAATCTTTCTGAGGATCCACATGGAATGTTTGCAGGGATGGTTGTCTTCTTAGTGGAAAAGGGGGTGCAAGCCCGCCGTTTGCAGAAGTTGGTCCAAATGGGTGCTAGTATTGAAGAACGTTTATCGAAAATGGTCAGCCATATATTTGCTGCGAGCTCGGATGCTCTTCTACAGAAAGTGGACGGTAAGCGTTTGGCGCGCTTTAAAGGGAAGGTTCTCTCGTACCAGTGGCTGGAAGATAGCTTAAGTTCAGGGGAGAAGGCGTCAGAGGATTTGTACAGTGTAAAAGTGAGTTTAGATGAAGAAGGAAGAGATAAGCCCCAACCGTTTATTTCCAAAAAACTAAAATTGTCTCCCAACAATTCGGAAGCAGTAAGTTCTGAAAGTGGTGGAAATTCAGATGCTTCAACCTTAGTAACAAGGACTGCTACAGGTGTTGAGGACTCCAAATTGAGCATTGGTCAGACAGTAACTAGTCCAAGAACTTCTGATTCTATTGATAGCAACACATCTCTGTCATATAGTCCACCAGATATGAATAAGAATATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGAACGAAGGTCATTTAGCTATTACAAGGCGATTCCAGTCATTGAGAAGCTACCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCGGCCATAGGAAAGTCATTGCAAGATCATATTCAAGAGATAGTGACAACTGGAAAGCTATCAAAATTGGAGCACTTTGAGACGGATGAAAAGGTTCGGACAATCTCACTGTTTGGGGAAGTATGGGGTATTGGCCCAGCCACAGCTTCGCGATTGTATGAGAAAGGATACAGGACACTCGATGACTTGCAAAAGGAGGAGTCATTAACTCATGCACAGAAATTGGGGTTGAAATATTTTGATGATATTAAACAAAGAATACCACGCAATGAGGTTCAGGACATGGAGAGTCTTCTAAAGAAGGCTGGGGAAGATGTTTTACCAGGGGTTGATATTCTATGTGGAGGATCATTTCGGCGAGGGAAGTTGTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGGTTTCAGAGATTGCCCCTCGCTTTATTCACTTCTGTATTAGTGTATCCAAGAGACATATATGCATTCGGATTGATAGCGTGGACTGGAAACGACGTACTAAATAGGAGACTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCTGGTGGTAAAAGGAGTACCAGAGGAACCGCAACTTTGAAGTTTGACACTGAAAAAGAAGTTTTCGAGTTCCTTGGATTTCCATGGCTGGAACCTCATCAAAGGAATCTATGA

Protein sequence

MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRLQKLVQMGASIEERLSKMVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKPQPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKLSCGDMDIVITHPDGKRFQRLPLALFTSVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRSTRGTATLKFDTEKEVFEFLGFPWLEPHQRNL

Homology

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BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot
Match: Q9FNY4 (DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 5.6e-163
Identity = 313/534 (58.61%), Postives = 380/534 (71.16%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEE-RLSKMVS 60
           MA KR + ++ S DP GMFAGMVVF+VE GVQ RRL    QKLVQMGA IEE R++K V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDK 120
           H+ A + +ALL K   +RL+ F  +++ YQWLEDSL+SGEKA+EDLY +K+  D E  DK
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKI--DSEEVDK 120

Query: 121 PQ---PFIS---------KKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIG 180
           P+   P IS         K+ + SP+  +    ES  N+  S   + T+  V  +  S G
Sbjct: 121 PKKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSP-DSPTSCSVPSTSASPG 180

Query: 181 QTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIE 240
           + +    TS   +S +   Y PPD+N+NITEIFGKLINIYRALG++RRSFSYYKAIPVIE
Sbjct: 181 EGIAETPTSPQSESTS--VYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIE 240

Query: 241 KLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIG 300
           K P +IES+DQ+KHLP IGK+++DHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWG+G
Sbjct: 241 KFPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVG 300

Query: 301 PATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGED 360
           PATA +LYEKG+RTL+DL+ E+SLTHAQKLGLKYFDDIK RIPR EVQ+ME LL++ GE+
Sbjct: 301 PATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEE 360

Query: 361 VLPGVDILCGGSFRRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT 420
            LPGV+I+CGGS+RRGK +CGD+DIV+THPDG+                 F R  L   T
Sbjct: 361 TLPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFST 420

Query: 421 ----------------------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAE 474
                                          VYPRDIY+FGLIAWTGNDVLNRRLRLLAE
Sbjct: 421 HSEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAE 480

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BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot
Match: Q67VC8 (DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 9.0e-145
Identity = 285/551 (51.72%), Postives = 364/551 (66.06%), Query Frame = 0


Query: 1   MAPKRRKTQNLSE---DPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSK- 60
           MAPKR+     +    DP GMF G+  F+V   VQ+RRL    Q+L QMG  ++E+L+  
Sbjct: 1   MAPKRKPPARAAAAKLDPDGMFRGVSAFVVPHAVQSRRLEVWKQRLAQMGGRVQEKLAAK 60

Query: 61  ----MVSHIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSL 120
                V+H+ AA + ALL+++D   L RF+G V+S++WLE+ L SGE+  E  ++  ++ 
Sbjct: 61  GGGGAVTHVLAADAKALLRELDAAWLHRFRGSVVSFEWLEECLKSGERLPEHKFA--INY 120

Query: 121 DEEGRDKPQPFI--------SKKLKLSPNNSEAVSSESGGNSDASTLVTR---------- 180
           +EE + K +           +K+ K+S +  E     +GGN ++   +            
Sbjct: 121 EEEFKPKKEGGAAGSGVLQSAKRSKISSDGPENRKETAGGNRESRDAIAHPNEDSDVVKG 180

Query: 181 --TATGVEDSKLSIGQTVTSPRT--SDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRAL 240
             T T  + +     +T+ S     ++   S  S +Y+PPD+N+NITEIFGKLINIYRAL
Sbjct: 181 PSTCTSSQSASGDSKETIASQNAFKAEEASSGESSTYAPPDLNRNITEIFGKLINIYRAL 240

Query: 241 GDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFET 300
           GD+RRSFSYYKAIPVIEKLPFKIES DQVK LPAIGKSL+DHI EIV TGKLSKLEHFE 
Sbjct: 241 GDDRRSFSYYKAIPVIEKLPFKIESADQVKDLPAIGKSLKDHINEIVNTGKLSKLEHFEN 300

Query: 301 DEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIP 360
           DEKVRT+SLFGEVWG+GPATA +LY+KG+RTLDDLQK++SLT AQ++GLK+FDDIKQRIP
Sbjct: 301 DEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQRIGLKFFDDIKQRIP 360

Query: 361 RNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKLSCGDMDIVITHPDG--------KRF 420
           R+EV +ME LL++ G D+LPGV I+CGGS+RRGK SCGDMDI+ITHPDG        K  
Sbjct: 361 RHEVSEMEKLLQEVGTDILPGVIIVCGGSYRRGKSSCGDMDIIITHPDGESHVGFLPKFV 420

Query: 421 QRLPLALF------------------------------------TSVLVYPRDIYAFGLI 474
           QRL    F                                      + VYPR+ +AFGL+
Sbjct: 421 QRLKGINFLREDLIFSIHSIEGTDCGVDTYFGLCTYPGRELRHRIDLKVYPRNRHAFGLL 480

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BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot
Match: Q5RKI3 (DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-43
Identity = 100/331 (30.21%), Postives = 163/331 (49.24%), Query Frame = 0


Query: 182 SYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAI 241
           S    + N +ITE    L   Y   GD+ R+  Y KAI  ++     + S  +   +P +
Sbjct: 244 SQKATNYNLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGV 303

Query: 242 GKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDL 301
           G+ + + + EI+ +G L KL+H    + V  + LF  +WG G  TA   Y +G+R+L+D+
Sbjct: 304 GRRMAEKVMEILESGHLRKLDHI--SDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLEDI 363

Query: 302 QKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKL 361
           +   SLT  Q +GLK++DD   R+PR E  ++E +++ + +   PG+  +  GSFRRGK+
Sbjct: 364 RGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKV 423

Query: 362 SCGDMDIVITHPDGKRFQRLPLALFTS--------------------------------- 421
           +CGD+D++ITHPDG+  Q +   L  S                                 
Sbjct: 424 TCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAG 483

Query: 422 -------VLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKR 473
                  ++V P   +A  L+ +TG+   NR +R LA++KG  L +  L  +   +    
Sbjct: 484 QRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGV 543

[Close]

BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot
Match: Q9QXE2 (DNA polymerase lambda OS=Mus musculus OX=10090 GN=Poll PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-43
Identity = 105/332 (31.63%), Postives = 165/332 (49.70%), Query Frame = 0


Query: 182 SYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAI 241
           S    + N +ITE    L   Y   GD+ R+  Y KAI  ++     + S  +   +P I
Sbjct: 244 SQKATNYNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGI 303

Query: 242 GKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDL 301
           GK + + + EI+ +G L KL+H    + V  + LF  +WG G  TA   Y +G+R L+DL
Sbjct: 304 GKRMAEKVMEILESGHLRKLDHI--SDSVPVLELFSNIWGAGTKTAQMWYHQGFRNLEDL 363

Query: 302 QKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKL 361
           Q   SLT  Q +GLK++DD   R+PR E  ++E  ++ + +   PG+  +  GS+RRGK+
Sbjct: 364 QSLGSLTAQQAIGLKHYDDFLDRMPREEAAEIEQTVRISAQAFNPGLLCVACGSYRRGKM 423

Query: 362 SCGDMDIVITHPDGKRFQRLPLALFTS--------------------------------- 421
           +CGD+D++ITHPDG+  + +   L  S                                 
Sbjct: 424 TCGDVDVLITHPDGRSHRGIFSCLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPG 483

Query: 422 -------VLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPS-TQGSGGK 473
                  ++V P   +A  L+ +TG+   NR +R LA++KG  L +  L  +  + S G 
Sbjct: 484 KRHRRLDIIVVPYCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGV 543

[Close]

BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot
Match: Q4R380 (DNA polymerase lambda OS=Macaca fascicularis OX=9541 GN=POLL PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-42
Identity = 103/325 (31.69%), Postives = 165/325 (50.77%), Query Frame = 0


Query: 189 NKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDH 248
           N +ITE    L   Y   GD+ R+  Y KAI  ++     + S  +   +P IGK + + 
Sbjct: 253 NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEK 312

Query: 249 IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYRTLDDLQKEESLT 308
           I EI+ +G L KL+H    E V  + LF  +WG G  TA   Y++G+R+L+D++ + SLT
Sbjct: 313 IIEILESGHLRKLDHI--SESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLT 372

Query: 309 HAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRGKLSCGDMDI 368
             Q +GLK+++D  +R+PR E  ++E  ++KA +    G+  +  GS+RRGK +CGD+D+
Sbjct: 373 TQQAIGLKHYNDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDV 432

Query: 369 VITHPDGKRFQRLPLALFTS---------------------------------------- 428
           +ITHPDG+  + +   L  S                                        
Sbjct: 433 LITHPDGRSHRGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGPGWRHRRLD 492

Query: 429 VLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPS-TQGSGGKRSTRGTA 473
           ++V P   +A  L+ +TG+   NR +R LA++KG  L +  L  +  + + G +   G  
Sbjct: 493 IIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKMGPG-R 552

[Close]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL
Match: A0A1S3BE44 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 7.5e-235
Identity = 434/521 (83.30%), Postives = 449/521 (86.18%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL
Match: A0A0A0KQD3 (DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 1.1e-233
Identity = 431/521 (82.73%), Postives = 448/521 (85.99%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+S DALL+KVDG RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRDKP
Sbjct: 61  IFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDKP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKL LSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTSD + 
Sbjct: 121 QQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +N +LSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPF+IESIDQVK
Sbjct: 181 NNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL
Match: A0A1S3BFA5 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 5.3e-233
Identity = 433/521 (83.11%), Postives = 448/521 (85.99%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKG VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL
Match: A0A5D3CUL1 (DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00710 PE=3 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 9.1e-225
Identity = 419/480 (87.29%), Postives = 432/480 (90.00%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKG VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT-SVLVYPRDIYAF 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T S  VYPRDIYAF
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEVYPRDIYAF 420

Query: 421 GLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRSTRGTATLKFDTEKEVFE 460
           GLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKR  RGTATLKFDTEKE  E
Sbjct: 421 GLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRGARGTATLKFDTEKEETE 479

[Close]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL
Match: A0A5A7STB3 (DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G003450 PE=3 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.3e-223
Identity = 419/507 (82.64%), Postives = 433/507 (85.40%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 460
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. NCBI nr
Match: XP_008446253.1 (PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446255.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo])

HSP 1 Score: 822.8 bits (2124), Expect = 1.5e-234
Identity = 434/521 (83.30%), Postives = 449/521 (86.18%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. NCBI nr
Match: XP_004135473.1 (DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical protein Csa_008261 [Cucumis sativus])

HSP 1 Score: 818.9 bits (2114), Expect = 2.2e-233
Identity = 431/521 (82.73%), Postives = 448/521 (85.99%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+S DALL+KVDG RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRDKP
Sbjct: 61  IFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDKP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKL LSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTSD + 
Sbjct: 121 QQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +N +LSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPF+IESIDQVK
Sbjct: 181 NNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. NCBI nr
Match: XP_038892425.1 (DNA polymerase lambda isoform X1 [Benincasa hispida])

HSP 1 Score: 818.5 bits (2113), Expect = 2.9e-233
Identity = 432/521 (82.92%), Postives = 450/521 (86.37%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK++NLS DPHGMF GM+VFLVEKGVQARRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSENLSGDPHGMFEGMIVFLVEKGVQARRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFAASSDALLQKV+G RLARFKGKVLSYQWLEDSLSSGEKASEDLY+VKV LDE+ RDKP
Sbjct: 61  IFAASSDALLQKVNGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVRLDEDVRDKP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q FISKKLKLSPNNSEAVSSE+GG+SDASTLVT+TATG+EDSKLSI QTVTSPRTSDS +
Sbjct: 121 QLFISKKLKLSPNNSEAVSSENGGDSDASTLVTKTATGLEDSKLSIDQTVTSPRTSDSKN 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIES D+VK
Sbjct: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESSDRVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKS QDHIQEIV+TGKLSKLEHFE DEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSFQDHIQEIVSTGKLSKLEHFEADEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDL+KEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLKKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYIKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. NCBI nr
Match: XP_008446256.1 (PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo])

HSP 1 Score: 816.6 bits (2108), Expect = 1.1e-232
Identity = 433/521 (83.11%), Postives = 448/521 (85.99%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+SSDALL+KVD  RLARFKG VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRD P
Sbjct: 61  IFASSSDALLEKVDSARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDNP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKLKLSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTS S+ 
Sbjct: 121 QQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +NTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK
Sbjct: 181 NNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDME+LLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. NCBI nr
Match: XP_011655646.1 (DNA polymerase lambda isoform X2 [Cucumis sativus])

HSP 1 Score: 812.8 bits (2098), Expect = 1.6e-231
Identity = 430/521 (82.53%), Postives = 447/521 (85.80%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEERLSKMVSH 60
           MAPKRRK+Q+LSEDPHGMFAGMVVFLVEKGVQ RRL    QKLVQMGASIEERLSKMVSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDKP 120
           IFA+S DALL+KVDG RLARFKG VLSYQWLEDSLSSGEKASEDLY+VKV LDE+GRDKP
Sbjct: 61  IFASSLDALLEKVDGARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGLDEDGRDKP 120

Query: 121 QPFISKKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIGQTVTSPRTSDSID 180
           Q    KKL LSPNNSEAVS ESGG+SDASTLVT+TATG+EDSKLSIGQTVTSPRTSD + 
Sbjct: 121 QQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVG 180

Query: 181 SNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQVK 240
           +N +LSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPF+IESIDQVK
Sbjct: 181 NNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVK 240

Query: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATASRLYEKGYR 300
           HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATA RLYEKGYR
Sbjct: 241 HLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYR 300

Query: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360
           TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF
Sbjct: 301 TLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSF 360

Query: 361 RRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT------------- 420
           RRGK SCGDMDIVITHPDGK                +F R  L   T             
Sbjct: 361 RRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTY 420

Query: 421 ---------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 474
                           + VYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP
Sbjct: 421 FGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYP 480

[Close]

BLAST of Lsi04G005120 vs. TAIR 10
Match: AT1G10520.1 (DNA polymerase lambda (POLL) )

HSP 1 Score: 575.5 bits (1482), Expect = 4.0e-164
Identity = 313/534 (58.61%), Postives = 380/534 (71.16%), Query Frame = 0


Query: 1   MAPKRRKTQNLSEDPHGMFAGMVVFLVEKGVQARRL----QKLVQMGASIEE-RLSKMVS 60
           MA KR + ++ S DP GMFAGMVVF+VE GVQ RRL    QKLVQMGA IEE R++K V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAASSDALLQKVDGKRLARFKGKVLSYQWLEDSLSSGEKASEDLYSVKVSLDEEGRDK 120
           H+ A + +ALL K   +RL+ F  +++ YQWLEDSL+SGEKA+EDLY +K+  D E  DK
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKI--DSEEVDK 120

Query: 121 PQ---PFIS---------KKLKLSPNNSEAVSSESGGNSDASTLVTRTATGVEDSKLSIG 180
           P+   P IS         K+ + SP+  +    ES  N+  S   + T+  V  +  S G
Sbjct: 121 PKKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSP-DSPTSCSVPSTSASPG 180

Query: 181 QTVTSPRTSDSIDSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIE 240
           + +    TS   +S +   Y PPD+N+NITEIFGKLINIYRALG++RRSFSYYKAIPVIE
Sbjct: 181 EGIAETPTSPQSESTS--VYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIE 240

Query: 241 KLPFKIESIDQVKHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIG 300
           K P +IES+DQ+KHLP IGK+++DHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWG+G
Sbjct: 241 KFPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVG 300

Query: 301 PATASRLYEKGYRTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGED 360
           PATA +LYEKG+RTL+DL+ E+SLTHAQKLGLKYFDDIK RIPR EVQ+ME LL++ GE+
Sbjct: 301 PATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEE 360

Query: 361 VLPGVDILCGGSFRRGKLSCGDMDIVITHPDGK----------------RFQRLPLALFT 420
            LPGV+I+CGGS+RRGK +CGD+DIV+THPDG+                 F R  L   T
Sbjct: 361 TLPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFST 420

Query: 421 ----------------------------SVLVYPRDIYAFGLIAWTGNDVLNRRLRLLAE 474
                                          VYPRDIY+FGLIAWTGNDVLNRRLRLLAE
Sbjct: 421 HSEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAE 480

The following BLAST results are available for this feature:

BLAST of Lsi04G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNY4	5.6e-163	58.61	DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1	[more]
Q67VC8	9.0e-145	51.72	DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1	[more]
Q5RKI3	1.5e-43	30.21	DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1	[more]
Q9QXE2	5.8e-43	31.63	DNA polymerase lambda OS=Mus musculus OX=10090 GN=Poll PE=2 SV=1	[more]
Q4R380	1.3e-42	31.69	DNA polymerase lambda OS=Macaca fascicularis OX=9541 GN=POLL PE=2 SV=1	[more]

BLAST of Lsi04G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BE44	7.5e-235	83.30	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A0A0KQD3	1.1e-233	82.73	DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1	[more]
A0A1S3BFA5	5.3e-233	83.11	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A5D3CUL1	9.1e-225	87.29	DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00710 ...	[more]
A0A5A7STB3	1.3e-223	82.64	DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G003450...	[more]

BLAST of Lsi04G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446253.1	1.5e-234	83.30	PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICT...	[more]
XP_004135473.1	2.2e-233	82.73	DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical prot...	[more]
XP_038892425.1	2.9e-233	82.92	DNA polymerase lambda isoform X1 [Benincasa hispida]	[more]
XP_008446256.1	1.1e-232	83.11	PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo]	[more]
XP_011655646.1	1.6e-231	82.53	DNA polymerase lambda isoform X2 [Cucumis sativus]	[more]

BLAST of Lsi04G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10520.1	4.0e-164	58.61	DNA polymerase lambda (POLL)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022312	DNA polymerase family X	PRINTS	PR00869	DNAPOLX	coord: 351..365 score: 49.23 coord: 281..298 score: 42.31 coord: 365..373 score: 54.7
IPR022312	DNA polymerase family X	PANTHER	PTHR11276	DNA POLYMERASE TYPE-X FAMILY MEMBER	coord: 18..472
IPR002008	DNA polymerase family X, beta-like	PRINTS	PR00870	DNAPOLXBETA	coord: 240..257 score: 36.67 coord: 312..326 score: 53.33 coord: 352..371 score: 51.0
IPR002054	DNA-directed DNA polymerase X	SMART	SM00483	polxneu3	coord: 187..472 e-value: 1.6E-91 score: 320.1
IPR002054	DNA-directed DNA polymerase X	CDD	cd00141	NT_POLXc	coord: 190..471 e-value: 2.42804E-99 score: 298.725
None	No IPR available	GENE3D	1.10.150.20		coord: 264..322 e-value: 1.7E-22 score: 80.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..182
None	No IPR available	PANTHER	PTHR11276:SF1	DNA POLYMERASE IV	coord: 18..472
None	No IPR available	SUPERFAMILY	81585	PsbU/PolX domain-like	coord: 267..322
IPR029398	DNA polymerase beta, thumb domain	PFAM	PF14791	DNA_pol_B_thumb	coord: 401..472 e-value: 4.8E-19 score: 68.3
IPR037160	DNA polymerase, thumb domain superfamily	GENE3D	3.30.210.10	DNA polymerase, thumb domain	coord: 396..472 e-value: 7.9E-19 score: 69.2
IPR028207	DNA polymerase beta, palm domain	PFAM	PF14792	DNA_pol_B_palm	coord: 324..382 e-value: 4.5E-17 score: 62.3
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 324..389 e-value: 1.1E-14 score: 56.6
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 324..472
IPR027421	DNA polymerase lambda lyase domain superfamily	GENE3D	1.10.150.110		coord: 177..263 e-value: 5.3E-25 score: 89.5
IPR027421	DNA polymerase lambda lyase domain superfamily	SUPERFAMILY	47802	DNA polymerase beta, N-terminal domain-like	coord: 184..264
IPR018944	DNA polymerase lambda, fingers domain	PFAM	PF10391	DNA_pol_lambd_f	coord: 275..321 e-value: 5.5E-19 score: 67.8
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 9..106 e-value: 1.7E-13 score: 52.3
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 10..105
IPR010996	DNA polymerase beta-like, N-terminal domain	PFAM	PF14716	HHH_8	coord: 189..254 e-value: 2.0E-14 score: 53.7
IPR019843	DNA polymerase family X, binding site	PROSITE	PS00522	DNA_POLYMERASE_X	coord: 354..373
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 14..104 score: 12.61628

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G005120.1	Lsi04G005120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0034061	DNA polymerase activity
molecular_function	GO:0016779	nucleotidyltransferase activity