Lsi04G004850 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G004850
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr04: 4497462 .. 4501860 (+)
RNA-Seq ExpressionLsi04G004850
SyntenyLsi04G004850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGTGTATGTATAGTTTTTATGATATAATTTTTTTTTTGGTATGAAAAAATAAAAATGGTAGGGAGCACCGCCCAGGTTGCCTAGTGCAGCGAGGTAGGTAAAATCTTTTCCTACAGAGATGGTGGAAATTATTCACTTTAGATCTTTTTCTCCAAATAATATTTTATTGCTTAATCATAATATTTAGGACTTAAAAATGTAATTTTTAATTGGGTGGAGTTTCATGAGTACAATCTAAAGTGCACCTAAGTTTTTTTCTTTTAACAGAGAACTATATCTAAATTGGTCTCTCTATTATATTTTACAAGAATTGAGACAAAAATCTGGAAGGAACTTAACTTGTTAACTATGACAATAATATATTAAAAAATGTTTGTTCCACATTTCTATATGGGTTGTTTTCATATATAAAAAAATAGATCAAACTATTTACAAATATAGAAAAATTTAAAATTTTTGTATATTTGTATATAGTTTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAACCACCAAGTGAAAATAACATAAATAAAATAAGCATTTTGATTTATTTAAAAAGTGTCAAATCTTTATTTATTGATTAAATTTCATTTTGAAGATTTTACTTTAATCTTTTTTAAAAATTATCCACCACGTCTTCATTTTATCATTTTTTAAAATAGAAATGGATGCTTATTTAGTTTTATTTTTTTTTATCTCTAAAGTATTTAAGCTTACATAGTCACTGTTGTTGTATTCTCGTCTCTCATTTTTAAAATGACTATTTTAGTCTCATAATTTTTTTAAAAAAAATTATTACTTTAGTCTTTATTTTTGACAAATTAATGACATAATTTTAAGTTTGTGTACTATCATGTTAATATATTCACAAAAGTTTAGAGAGTAAAAAAATAAGTAATAGACAAGTGAAAGTTAAATAACAAAAGCTACATAACAACGACAAAAACTATTTTTTTTTATAAGTTTAAAAACTTAAATAAATATCATAAAAATTTAAAGATTAAAATAGAACAAACACAAAAGTTTAGGAATTATAATAAATACTTTAAAACTTAAAACCAAAATAAGATTTAAACATAATTTCTTATATAATTTATGTTTTAAATTTAAAGCTTTTTGTTCCTAACTAATTAAGAAATAATATCTTTTGACCAAATTATCAATTCCTAATCCATGTTGTCAGAACTTGAAAAAGACAAAAATTTTAACTTCTTGTATTCAAAAATAGAAATCAAACAATAACAAAATATTTGTTTTCTCTCCCAAAGATTTAAAAAAATTCAAATATAAAAGAATAGCAAAATTATTTACCATCCATCGATATAATTTTATCAGGTTGAAATTTTTCTATATTTATAAATAGTTTAATATTTGTTTGTTTATAATAATTATTTTTTTAAAAAAATAAAAATAAAAATCCGACAAAAAAGACAATTAAATTAAGATAATATTTTGTTGATTGGATCAAGTGAAATGCACGAATATCAATGCTTCGAGATGCATTTAAGGGGTCAATTAGAAAATGATGGTAGTTTTAAGAAAAAATTGTTGAAAATGGATAGTTTTAAAATTATTTAGGAAAATAAGGTAGTTTTTTTGTTTTTTTTAGTGAAAACTTTATTGAAAGTTGGAATAGGACCCACATAATGAATGAAATGATAATTATTGTGATTTTTTTTTTAACAAATTCATTTTCTTTAACTTTTTAAGGAAACATAATACCATTTTTCTATAATTATTATCTTATTGAATTTAATTAAAAAAATATTATATATTTAATCATTTTATTTGTAAAATAATAAACTATTATCTATGGATAAAGATAATACCACTACTTTTTTTTACATCATATTGTTGTTTTATTTTACTAAATTTGTGAACTAGGTAATATTTAAAAAGAAAATTACAATATGATATAGTAAAATAAATTTATTACATAGATAAGTAAAATTCTAAAACCTTGCTACGTGAAAATATCAAAAGTTCTAATTTTTTCTAATATATTACTAATCCTTCTGAGTAAAATTAGTGGATAGTTATATTTTTCGAAAAAATACCTTTTGGTTTATTAGATTTGGATTTAATTTCTATTTGGTTTCTATGTTTTAAAATTTAACACTTTTGTCCCTAAGATTTCAATAATGCTCAATTTTAGTCATTTACATAACAGAACTGTTAGAGGCCGTTTGGTTTAAGGATTTATAAAATTAAGCCCGACAATCTTATATAATTGTAATAGATTAATTAATTAAACAATAGACATCATTCAATACATTGATAAAAAATAATTAATTAAGAATCAATAATAATCTTAATTATAAATATTTAAAAATTAAGTAATTTATAATTGAAATTAACCAATTAATGTATTTAATGAACATCATATTAATTATAATATTATTATTTAATCATTTTTATAATTAATTAAGTTCAACACTAGTAATTTTAATATTAATTAAATAATATAAGAAAATATATTTTAATAAATAATAGATTATATAAAAAGTCAAACAAACAAATAAAAATATGATATGTTAATAAAGAATACTAATTTCTTTTTATAAATATGATATATTAATAATGAATGAAGTAATAAAAATTAATGATAATAAATAATTAATTGATTATAAATAATCTATAATGATTATACGTTCATAATGAAGGATAAATTTAAAATTAATCTCAATCAATATATCTTGTTGATCTTTTGGGTTTTGACAATTCTAATATTTGCGTGAATGAGGAGGAAGAAGAATAAGGGGAAACTTGTAATTTTGAAAAATTAATTAAAAATTAGCTTGAAATTTCATGGTTCAAGTCGGAAAAGTTGAAGATGAAGAGAAGAAAAAGGAAATGGTGTAATATGAGCGAGTATAATGAAATCGAAGACTGCAACAACCAGAAAAAGAAAAAAAATAAAAAAAATAAAAAAAAAAGATGGAAACATGTGCTCCCTAACATACGAACAAGGACAAATTCAAAAGTTTTAAAAAATTTAAAAGTTGACTGGTCAACATTTGTCATATTTGCAAACATTTTAAAGAAATGCTATATGTTTAGATTTTTTCCCTTGATTTTGTTATCTATTACAATTCTCCGTGCTTTAAAATAAAACTACAATATGATGTAAGATTAAAAAAAAATAGTGGTATTATCTTAATTTATATTTAATAGTTTATTATTTTATAAATAAAATGATTAAATATGTAATATTTTTGTAATTAAATTTAATCTTGCTAAAAAAAAATAAAGAAAATTACATGATATAATAAAATAACAATTATAAAAAAAAAAAAGTGATATTATATTTCCTTAAATAAAAATAAAGTAAATTAATTTATAAAAAAAAATCAAAATAGTTGTTATTTTCTTCGTGAGTCCCATTTCAACTTTTAAAACCACCCCTTTTTACCAATTTTTTTTTAAAACCACCCATATTTCCTAATTAAGCCTGCATTTAAGTATTTTTTTTATTTATTAAACTATTCACGATAGAAACAATATCGTCGACAAAGTTTTCAGATTGGTATATGAAGCAAAGCAGTTGAAGGGAATCATACGAACCTGGAACGTGGAGGATCGGCGCACGGATTTGGGCGTGGCCGGAGAACTCTTCCCGGAGACGGAAAAGTCATCGGAATCCGCCGAAGAAAGGGCGGAATTTGACATGGACCACGTCCTTCGACTCATCAACAAACAATACTTAGGGATTTCAATAACCGGTTCGACGTCCCACAAAATCCATCCCTTAGTGGAAGAGAACCGCGGCTCGTCATGAGTCACAGAGTTCCTCCATGGCGGCGTAACGCCGTTCGCTCTCAAATAACTGCCGCACCAACTCATCAATTTCACCTGATCGCCGTCGCGTACAGGCTCCCATTCCACAGTCCAGGCGGCGGAAAGTTTTTGGTTCTTAGTTTGCAATATCACCTTCTTCCCCGTGGCACCGAGTAG

mRNA sequence

ATGACGGGAGCACCGCCCAGGTTGCCTAGTGCAGCGAGGGAATCATACGAACCTGGAACGTGGAGGATCGGCGCACGGATTTGGGCGTGGCCGGAGAACTCTTCCCGGAGACGGAAAAGTCATCGGAATCCGCCGAAGAAAGGGCGGAATTTGACATGGACCACGGATTTCAATAACCGGTTCGACGTCCCACAAAATCCATCCCTTAGTGGAAGAGAACCGCGGCTCGTCATGAGTCACAGAGTTCCTCCATGGCGGCGTAACGCCGTTCGCTCTCAAATAACTGCCGCACCAACTCATCAATTTCACCTGATCGCCGTCGCGTACAGGCTCCCATTCCACAGTCCAGGCGGCGGAAAGTTTTTGGTTCTTAGTTTGCAATATCACCTTCTTCCCCGTGGCACCGAGTAG

Coding sequence (CDS)

ATGACGGGAGCACCGCCCAGGTTGCCTAGTGCAGCGAGGGAATCATACGAACCTGGAACGTGGAGGATCGGCGCACGGATTTGGGCGTGGCCGGAGAACTCTTCCCGGAGACGGAAAAGTCATCGGAATCCGCCGAAGAAAGGGCGGAATTTGACATGGACCACGGATTTCAATAACCGGTTCGACGTCCCACAAAATCCATCCCTTAGTGGAAGAGAACCGCGGCTCGTCATGAGTCACAGAGTTCCTCCATGGCGGCGTAACGCCGTTCGCTCTCAAATAACTGCCGCACCAACTCATCAATTTCACCTGATCGCCGTCGCGTACAGGCTCCCATTCCACAGTCCAGGCGGCGGAAAGTTTTTGGTTCTTAGTTTGCAATATCACCTTCTTCCCCGTGGCACCGAGTAG

Protein sequence

MTGAPPRLPSAARESYEPGTWRIGARIWAWPENSSRRRKSHRNPPKKGRNLTWTTDFNNRFDVPQNPSLSGREPRLVMSHRVPPWRRNAVRSQITAAPTHQFHLIAVAYRLPFHSPGGGKFLVLSLQYHLLPRGTE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G004850.1Lsi04G004850.1mRNA