Lsi04G004830 (gene) Bottle gourd (USVL1VR-Ls) v1

BLAST of Lsi04G004830 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 4.2e-35
Identity = 120/390 (30.77%), Postives = 166/390 (42.56%), Query Frame = 0

Query: 60  QVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGA 119
           +VF++MP R LVS N MIDA  + G +++ L+LF EMQ SFEPDG        ACAG+G+
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGS 266

Query: 120 FSLGTWAHAHALKK--ASVVGDVLINSSLVDMYNKRGSLRMAQQ---------------- 179
            SLGTWAHA  L+K    V  DVL+ +SL++MY K GSLRMA+Q                
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386

Query: 240 --IEPRLEHYGCLVHLLSRSGFIDEALKLCLFTRMR------------------------ 279
             IEP LEHYGC+V L++R+G+I EA+ + +   M+                        
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446

BLAST of Lsi04G004830 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.3e-15
Identity = 77/292 (26.37%), Postives = 116/292 (39.73%), Query Frame = 0

Query: 61  VFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDGACAGIGAFSLGTWAHA 120
           VF   P + +V+ N MI  YA  G  ++ L+LF+EMQ          G+    +      
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ-------GITGLQPTDITFIGTL 375

Query: 121 HALKKASVVGD-VLINSSLVDMYNKRGSLRMAQQIEPRLEHYGCLVHLLSRSGFIDEALK 180
            A   A +V + + I  S+   Y           I+P++EHYGCLV LL R+G +  A +
Sbjct: 376 QACAHAGLVNEGIRIFESMGQEYG----------IKPKIEHYGCLVSLLGRAGQLKRAYE 435

Query: 181 LCLFTRMRID-------------------------------------------------- 240
                 M  D                                                  
Sbjct: 436 TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 495

Query: 241 ---VGLVKKEMADKGVTKEPDYSSIEID---------DTSNPKIKEIYDVIDLIEEKLEK 279
              V  V+  M +KG+ KEP  S+IEI+         D  + K KEIY ++  I E+++ 
Sbjct: 496 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 555

BLAST of Lsi04G004830 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 91/418 (21.77%), Postives = 152/418 (36.36%), Query Frame = 0

Query: 19  LKLVESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMID 78
           L L+ +I     +  F +H S    L T  + L++++    ++F++ P + L S N MI 
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR-KLFDESPEKSLPSWNAMIS 394

Query: 79  AYAQCGLFENDLKLFDEMQNS-FEPD--------GACAGIGAFSLGTWAHAHALKKASVV 138
            Y Q GL E+ + LF EMQ S F P+         ACA +GA SLG W H   ++     
Sbjct: 395 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTDFE 454

Query: 139 GDVLINSSLVDMYNKRGSLRMAQQI----------------------------------- 198
             + ++++L+ MY K GS+  A+++                                   
Sbjct: 455 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 514

Query: 199 -----------------------------------------EPRLEHYGCLVHLLSRSGF 258
                                                    EP ++HY C+V +L R+G 
Sbjct: 515 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 574

Query: 259 IDEALK----------------LCLFTRMRIDVGL------------------------- 279
           +  AL+                L    R+  D  L                         
Sbjct: 575 LQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 634

BLAST of Lsi04G004830 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 86/388 (22.16%), Postives = 133/388 (34.28%), Query Frame = 0

Query: 61  VFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG---------ACAGIGA 120
           +FE++P++ ++S N +I  Y    L++  L LF EM  S E            ACA +GA
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 121 FSLGTWAHAHALKK-ASVVGDVLINSSLVDMYNKRGSLRMAQQI---------------- 180
             +G W H +  K+   V     + +SL+DMY K G +  A Q+                
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502

Query: 241 EPRLEHYGCLVHLLSRSGFIDEALKLCLFTRMRID------------------------V 296
            P+LEHYGC++ LL  SG   EA ++     M  D                         
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562

BLAST of Lsi04G004830 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12
Identity = 84/384 (21.88%), Postives = 132/384 (34.38%), Query Frame = 0

Query: 60  QVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQ-----------NSFEPD---GA 119
           ++F++MP R ++S + +I+ Y  CG ++  L LF EMQ           N F       A
Sbjct: 149 KLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSA 208

Query: 120 CAGIGAFSLGTWAHAHALKKASVVGDVLINSSLVDMYNKRGSLRMAQQ------------ 179
           C  +GA   G W HA+ + K  V  D+++ ++L+DMY K GSL  A++            
Sbjct: 209 CGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVK 268

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 269 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 328

Query: 240 ------IEPRLEHYGCLVHLLSRSGFIDEA----------------------------LK 279
                 I P ++HYGC+V L  RSG I EA                            +K
Sbjct: 329 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 388

BLAST of Lsi04G004830 vs. ExPASy TrEMBL
Match: A0A1S3BE78 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489069 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 206/554 (37.18%), Postives = 227/554 (40.97%), Query Frame = 0

Query: 23  ESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQ---------------------- 82
           +S P+EIKR+TF+THQS+LLHLLTD TDLSKLKQIHAQ                      
Sbjct: 16  QSFPIEIKRETFNTHQSRLLHLLTDCTDLSKLKQIHAQAIRNFSTHKSSLFLYSRILHVS 75

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 76  SLIDFDYACRVFNQIGNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTF 135

Query: 143 -----------------------------------------------------VFEKMPH 202
                                                                VFEKMP 
Sbjct: 136 PFLLKACAYVFALSEGRQAHAHIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPL 195

Query: 203 RRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGAFSLGTWAH 262
           R LVS NVMIDAY QCGLFEN LKLF EMQNSFEPDG        ACAGIGA SLG WAH
Sbjct: 196 RSLVSWNVMIDAYVQCGLFENALKLFFEMQNSFEPDGYTMQSIISACAGIGALSLGMWAH 255

Query: 263 AHALKKA--SVVGDVLINSSLVDMYNKRGSLRMAQQ------------------------ 279
           A+ L+KA  ++ GDVLINSSLVDMY+K GSLRMAQQ                        
Sbjct: 256 AYVLRKAGGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHG 315

BLAST of Lsi04G004830 vs. ExPASy TrEMBL
Match: A0A5D3CYP1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00380 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 8.5e-63
Identity = 180/403 (44.67%), Postives = 200/403 (49.63%), Query Frame = 0

Query: 39  SQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQN 98
           + L+HL      LS    +  +VFEKMP R LVS NVMIDAY QCGLFEN LKLF EMQN
Sbjct: 75  NSLIHLYASCGCLS----MALKVFEKMPLRSLVSWNVMIDAYVQCGLFENALKLFFEMQN 134

Query: 99  SFEPDG--------ACAGIGAFSLGTWAHAHALKKA--SVVGDVLINSSLVDMYNKRGSL 158
           SFEPDG        ACAGIGA SLG WAHA+ L+KA  ++ GDVLINSSLVDMY+K GSL
Sbjct: 135 SFEPDGYTMQSIISACAGIGALSLGMWAHAYVLRKAGGAMAGDVLINSSLVDMYSKCGSL 194

Query: 159 RMAQQ------------------------------------------------------- 218
           RMAQQ                                                       
Sbjct: 195 RMAQQVFETMPKHDLNSWNSMILALAMHGLGEAALQCFSRLVEMEIFLPNSVTFVGVLSA 254

Query: 219 ----------------------IEPRLEHYGCLVHLLSRSGFIDEALKL----------- 278
                                 IEPRLEHYGCLV LLSRSGFIDEAL+L           
Sbjct: 255 CNHRGMVADGRKYFDMMVNEYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAV 314

BLAST of Lsi04G004830 vs. ExPASy TrEMBL
Match: A0A0A0KTV7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604120 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.7e-61
Identity = 177/403 (43.92%), Postives = 196/403 (48.64%), Query Frame = 0

Query: 39  SQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQN 98
           + L+HL      LS    +  +VFEKMP R LVS NVMIDAY Q GLFEN LKLF EMQN
Sbjct: 165 NSLIHLYASCGCLS----MALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN 224

Query: 99  SFEPDG--------ACAGIGAFSLGTWAHAHALKKAS--VVGDVLINSSLVDMYNKRGSL 158
           SFEPDG        ACAGIGA SLG WAHA+ L+KAS  + GDVLINSSLVDMY+K GSL
Sbjct: 225 SFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSL 284

Query: 159 RMAQQ------------------------------------------------------- 218
           RMAQQ                                                       
Sbjct: 285 RMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSA 344

Query: 219 ----------------------IEPRLEHYGCLVHLLSRSGFIDEALKLC---------- 278
                                 IEPRLEHYGCLV LLSRSGFIDEAL+L           
Sbjct: 345 CNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAV 404

BLAST of Lsi04G004830 vs. ExPASy TrEMBL
Match: A0A6J1GYL5 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458669 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.0e-60
Identity = 198/554 (35.74%), Postives = 222/554 (40.07%), Query Frame = 0

Query: 23  ESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQ---------------------- 82
           +SIPVEIK +TFH  QS+LLHLL+D TDLS+LKQIHAQ                      
Sbjct: 10  QSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLFLFSRILHVS 69

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 70  SLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQAIELFYRMLEEGSVEPDKHTF 129

Query: 143 -----------------------------------------------------VFEKMPH 202
                                                                VFEKMPH
Sbjct: 130 PFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLALKVFEKMPH 189

Query: 203 RRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGAFSLGTWAH 262
           R LVS NVMIDAY QCGLF+N L LF EMQN+FEPDG        ACAGIGA SLG W+H
Sbjct: 190 RSLVSWNVMIDAYVQCGLFKNALNLFAEMQNTFEPDGYTMQSIISACAGIGALSLGMWSH 249

Query: 263 AHALKK--ASVVGDVLINSSLVDMYNKRGSLRMAQQ------------------------ 279
           A+ L+K   ++VG+VLINSSLVDMY+K GSL MAQQ                        
Sbjct: 250 AYVLRKTGGAMVGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNSMILAFAMHG 309

BLAST of Lsi04G004830 vs. ExPASy TrEMBL
Match: A0A6J1KA08 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492988 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 7.5e-59
Identity = 173/405 (42.72%), Postives = 196/405 (48.40%), Query Frame = 0

Query: 39  SQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQN 98
           + L+HL      LS    +  +VFE+MPHR LVS NVMIDAY Q GLFEN LKLF EMQ+
Sbjct: 165 NSLIHLYASCGCLS----LALKVFEQMPHRSLVSWNVMIDAYVQRGLFENALKLFAEMQD 224

Query: 99  SFEPDG--------ACAGIGAFSLGTWAHAHALKK--ASVVGDVLINSSLVDMYNKRGSL 158
           +FEPDG        ACAGIGA SLG W+HA+ L++   ++ G+VLINSSLVDMY+K GSL
Sbjct: 225 TFEPDGYTMQSIISACAGIGALSLGMWSHAYVLRRTGGAMAGEVLINSSLVDMYSKCGSL 284

Query: 159 RMAQQ------------------------------------------------------- 218
           RMAQQ                                                       
Sbjct: 285 RMAQQVFETMPKRDLNSWNSMILALAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSA 344

Query: 219 ----------------------IEPRLEHYGCLVHLLSRSGFIDEALKLCLFTRMRI--- 278
                                 I PRLEHYGCLV LLSRSGFIDEAL+  L T M I   
Sbjct: 345 CNHRGMVTEGRKYFDMMVNEYKIVPRLEHYGCLVDLLSRSGFIDEALE--LVTNMHIKPD 404

BLAST of Lsi04G004830 vs. NCBI nr
Match: XP_008446291.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.2e-64
Identity = 206/554 (37.18%), Postives = 227/554 (40.97%), Query Frame = 0

Query: 23  ESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQ---------------------- 82
           +S P+EIKR+TF+THQS+LLHLLTD TDLSKLKQIHAQ                      
Sbjct: 16  QSFPIEIKRETFNTHQSRLLHLLTDCTDLSKLKQIHAQAIRNFSTHKSSLFLYSRILHVS 75

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 76  SLIDFDYACRVFNQIGNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTF 135

Query: 143 -----------------------------------------------------VFEKMPH 202
                                                                VFEKMP 
Sbjct: 136 PFLLKACAYVFALSEGRQAHAHIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPL 195

Query: 203 RRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGAFSLGTWAH 262
           R LVS NVMIDAY QCGLFEN LKLF EMQNSFEPDG        ACAGIGA SLG WAH
Sbjct: 196 RSLVSWNVMIDAYVQCGLFENALKLFFEMQNSFEPDGYTMQSIISACAGIGALSLGMWAH 255

Query: 263 AHALKKA--SVVGDVLINSSLVDMYNKRGSLRMAQQ------------------------ 279
           A+ L+KA  ++ GDVLINSSLVDMY+K GSLRMAQQ                        
Sbjct: 256 AYVLRKAGGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHG 315

BLAST of Lsi04G004830 vs. NCBI nr
Match: XP_038892628.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-63
Identity = 206/556 (37.05%), Postives = 224/556 (40.29%), Query Frame = 0

Query: 23  ESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQ---------------------- 82
           +SIP+EIKR+TFHTHQS+LLHLLT  TDLSKLKQIHAQ                      
Sbjct: 10  QSIPIEIKRETFHTHQSRLLHLLTHCTDLSKLKQIHAQVIRNFSTHKSSLFLYSRILHVS 69

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 70  SLTDFDYACRVFYQIGNPNSFMWNTLIGACARSLDRKEQAIELFYGMLEEGSVEPDKHTF 129

Query: 143 -----------------------------------------------------VFEKMPH 202
                                                                VFEKMP 
Sbjct: 130 PFLLKACAYVFALSEGRQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLSIALKVFEKMPL 189

Query: 203 RRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPD--------GACAGIGAFSLGTWAH 262
           R LVS NVMIDAY QCG FEN LKLF +MQNSFEPD        GACAGIGA S+G WAH
Sbjct: 190 RSLVSWNVMIDAYVQCGDFENALKLFVDMQNSFEPDGYTMQSIIGACAGIGALSVGMWAH 249

Query: 263 AHALKKA--SVVGDVLINSSLVDMYNKRGSLRMAQQ------------------------ 279
           A+ L+KA  ++  DVLINSSL+DMY+K  SLRMAQQ                        
Sbjct: 250 AYVLRKANGAMANDVLINSSLIDMYSKCASLRMAQQVFDTMPKHDLNSWNSMILAHAMHG 309

BLAST of Lsi04G004830 vs. NCBI nr
Match: KAA0034373.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15546.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-62
Identity = 180/403 (44.67%), Postives = 200/403 (49.63%), Query Frame = 0

Query: 39  SQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQN 98
           + L+HL      LS    +  +VFEKMP R LVS NVMIDAY QCGLFEN LKLF EMQN
Sbjct: 75  NSLIHLYASCGCLS----MALKVFEKMPLRSLVSWNVMIDAYVQCGLFENALKLFFEMQN 134

Query: 99  SFEPDG--------ACAGIGAFSLGTWAHAHALKKA--SVVGDVLINSSLVDMYNKRGSL 158
           SFEPDG        ACAGIGA SLG WAHA+ L+KA  ++ GDVLINSSLVDMY+K GSL
Sbjct: 135 SFEPDGYTMQSIISACAGIGALSLGMWAHAYVLRKAGGAMAGDVLINSSLVDMYSKCGSL 194

Query: 159 RMAQQ------------------------------------------------------- 218
           RMAQQ                                                       
Sbjct: 195 RMAQQVFETMPKHDLNSWNSMILALAMHGLGEAALQCFSRLVEMEIFLPNSVTFVGVLSA 254

Query: 219 ----------------------IEPRLEHYGCLVHLLSRSGFIDEALKL----------- 278
                                 IEPRLEHYGCLV LLSRSGFIDEAL+L           
Sbjct: 255 CNHRGMVADGRKYFDMMVNEYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAV 314

BLAST of Lsi04G004830 vs. NCBI nr
Match: XP_004135466.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 9.7e-61
Identity = 177/403 (43.92%), Postives = 196/403 (48.64%), Query Frame = 0

Query: 39  SQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQN 98
           + L+HL      LS    +  +VFEKMP R LVS NVMIDAY Q GLFEN LKLF EMQN
Sbjct: 165 NSLIHLYASCGCLS----MALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN 224

Query: 99  SFEPDG--------ACAGIGAFSLGTWAHAHALKKAS--VVGDVLINSSLVDMYNKRGSL 158
           SFEPDG        ACAGIGA SLG WAHA+ L+KAS  + GDVLINSSLVDMY+K GSL
Sbjct: 225 SFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSL 284

Query: 159 RMAQQ------------------------------------------------------- 218
           RMAQQ                                                       
Sbjct: 285 RMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSA 344

Query: 219 ----------------------IEPRLEHYGCLVHLLSRSGFIDEALKLC---------- 278
                                 IEPRLEHYGCLV LLSRSGFIDEAL+L           
Sbjct: 345 CNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAV 404

BLAST of Lsi04G004830 vs. NCBI nr
Match: KAG7032179.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.0 bits (624), Expect = 9.7e-61
Identity = 200/556 (35.97%), Postives = 221/556 (39.75%), Query Frame = 0

Query: 23  ESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQ---------------------- 82
           +SIPVEIK +TFH  QS+LLHLL+D TDLS+LKQIHAQ                      
Sbjct: 10  QSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLFLFSRILHAS 69

Query: 83  ------------------------------------------------------------ 142
                                                                       
Sbjct: 70  SLTDFEYALRVFDQIDSPNSFVWNTLIGACARSLDRKEQAIELFYRMLEEGSVEPDKHTF 129

Query: 143 -----------------------------------------------------VFEKMPH 202
                                                                VFEKMPH
Sbjct: 130 PFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLHASCGYLSLALKVFEKMPH 189

Query: 203 RRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGAFSLGTWAH 262
           R LVS NVMIDAY QCGLFEN L LF EMQN+FEPDG        ACAGIGA SLG W+H
Sbjct: 190 RSLVSWNVMIDAYVQCGLFENALNLFAEMQNTFEPDGYTMQSIISACAGIGALSLGMWSH 249

Query: 263 AHALKK--ASVVGDVLINSSLVDMYNKRGSLRMAQQ------------------------ 279
           A+ L+K   ++ G+VLINSSLVDMY+K GSL MAQQ                        
Sbjct: 250 AYVLRKTGGAMAGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNSMILAFAMHG 309

BLAST of Lsi04G004830 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-36
Identity = 120/390 (30.77%), Postives = 166/390 (42.56%), Query Frame = 0

Query: 60  QVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG--------ACAGIGA 119
           +VF++MP R LVS N MIDA  + G +++ L+LF EMQ SFEPDG        ACAG+G+
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGS 266

Query: 120 FSLGTWAHAHALKK--ASVVGDVLINSSLVDMYNKRGSLRMAQQ---------------- 179
            SLGTWAHA  L+K    V  DVL+ +SL++MY K GSLRMA+Q                
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386

Query: 240 --IEPRLEHYGCLVHLLSRSGFIDEALKLCLFTRMR------------------------ 279
             IEP LEHYGC+V L++R+G+I EA+ + +   M+                        
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446

BLAST of Lsi04G004830 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-16
Identity = 77/292 (26.37%), Postives = 116/292 (39.73%), Query Frame = 0

Query: 61  VFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDGACAGIGAFSLGTWAHA 120
           VF   P + +V+ N MI  YA  G  ++ L+LF+EMQ          G+    +      
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ-------GITGLQPTDITFIGTL 375

Query: 121 HALKKASVVGD-VLINSSLVDMYNKRGSLRMAQQIEPRLEHYGCLVHLLSRSGFIDEALK 180
            A   A +V + + I  S+   Y           I+P++EHYGCLV LL R+G +  A +
Sbjct: 376 QACAHAGLVNEGIRIFESMGQEYG----------IKPKIEHYGCLVSLLGRAGQLKRAYE 435

Query: 181 LCLFTRMRID-------------------------------------------------- 240
                 M  D                                                  
Sbjct: 436 TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 495

Query: 241 ---VGLVKKEMADKGVTKEPDYSSIEID---------DTSNPKIKEIYDVIDLIEEKLEK 279
              V  V+  M +KG+ KEP  S+IEI+         D  + K KEIY ++  I E+++ 
Sbjct: 496 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 555

BLAST of Lsi04G004830 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 91/418 (21.77%), Postives = 152/418 (36.36%), Query Frame = 0

Query: 19  LKLVESIPVEIKRQTFHTHQSQLLHLLTDSTDLSKLKQIHAQVFEKMPHRRLVSLNVMID 78
           L L+ +I     +  F +H S    L T  + L++++    ++F++ P + L S N MI 
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR-KLFDESPEKSLPSWNAMIS 394

Query: 79  AYAQCGLFENDLKLFDEMQNS-FEPD--------GACAGIGAFSLGTWAHAHALKKASVV 138
            Y Q GL E+ + LF EMQ S F P+         ACA +GA SLG W H   ++     
Sbjct: 395 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTDFE 454

Query: 139 GDVLINSSLVDMYNKRGSLRMAQQI----------------------------------- 198
             + ++++L+ MY K GS+  A+++                                   
Sbjct: 455 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 514

Query: 199 -----------------------------------------EPRLEHYGCLVHLLSRSGF 258
                                                    EP ++HY C+V +L R+G 
Sbjct: 515 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 574

Query: 259 IDEALK----------------LCLFTRMRIDVGL------------------------- 279
           +  AL+                L    R+  D  L                         
Sbjct: 575 LQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNI 634

BLAST of Lsi04G004830 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-14
Identity = 86/388 (22.16%), Postives = 133/388 (34.28%), Query Frame = 0

Query: 61  VFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQNSFEPDG---------ACAGIGA 120
           +FE++P++ ++S N +I  Y    L++  L LF EM  S E            ACA +GA
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382

Query: 121 FSLGTWAHAHALKK-ASVVGDVLINSSLVDMYNKRGSLRMAQQI---------------- 180
             +G W H +  K+   V     + +SL+DMY K G +  A Q+                
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502

Query: 241 EPRLEHYGCLVHLLSRSGFIDEALKLCLFTRMRID------------------------V 296
            P+LEHYGC++ LL  SG   EA ++     M  D                         
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562

BLAST of Lsi04G004830 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 84/384 (21.88%), Postives = 132/384 (34.38%), Query Frame = 0

Query: 60  QVFEKMPHRRLVSLNVMIDAYAQCGLFENDLKLFDEMQ-----------NSFEPD---GA 119
           ++F++MP R ++S + +I+ Y  CG ++  L LF EMQ           N F       A
Sbjct: 149 KLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSA 208

Query: 120 CAGIGAFSLGTWAHAHALKKASVVGDVLINSSLVDMYNKRGSLRMAQQ------------ 179
           C  +GA   G W HA+ + K  V  D+++ ++L+DMY K GSL  A++            
Sbjct: 209 CGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVK 268

Query: 180 ------------------------------------------------------------ 239
                                                                       
Sbjct: 269 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 328

Query: 240 ------IEPRLEHYGCLVHLLSRSGFIDEA----------------------------LK 279
                 I P ++HYGC+V L  RSG I EA                            +K
Sbjct: 329 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 388