Homology
BLAST of Lsi04G004620 vs. ExPASy Swiss-Prot
Match:
Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 4.9e-54
Identity = 92/141 (65.25%), Postives = 119/141 (84.40%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNG+G+KCL+L SLMK++G+ PN VTF+ VLRGCSVVGF DEG+ HFDSM+ + GI+PQL
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGC+VDLY+R G+L++A++ I MP+KPHA W +LL+A RMYKN+ELG AS+K++E
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LE NH AYVLLSNIYAD+ +
Sbjct: 438 LETANHGAYVLLSNIYADSND 458
BLAST of Lsi04G004620 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 149.1 bits (375), Expect = 3.9e-35
Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = 0
Query: 2 NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQLE 61
+G+G+K + L M EG+ P+ +TF+ +L CS G DEG+ F+ M+ D+GI P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 62 HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
HYGCMVD+Y R GQL+ AL FI +M L+P A WGALL+ACR++ N++LGK AS L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 122 EAKNHSAYVLLSNIYA 138
E ++ +VLLSN+YA
Sbjct: 650 EPEHVGYHVLLSNMYA 665
BLAST of Lsi04G004620 vs. ExPASy Swiss-Prot
Match:
Q9LND4 (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E61 PE=2 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 2.5e-34
Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
+NG ++ L MK + +VPN VTF+ +L CS G EG F+SM RD+G+ P+
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHY CMVDL R G++ EA +FI+ MP+KP A AWGALL+ACR++K ++L + KL+
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509
Query: 121 LEAKNHSAYVLLSNIYAD 139
+E + S YVLLSNIYAD
Sbjct: 510 MEPEKSSVYVLLSNIYAD 527
BLAST of Lsi04G004620 vs. ExPASy Swiss-Prot
Match:
Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 7.3e-34
Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 2 NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQLE 61
+G+ + L+ + M EG+ PNEVT++ +L CS VG EG HF+SM DH I+P++E
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 62 HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
HY CMVDL R G L +A FINTMP + W L ACR++ N ELGK A+RK++EL
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 122 EAKNHSAYVLLSNIYA 138
+ +AY+ LSNIYA
Sbjct: 673 DPNEPAAYIQLSNIYA 688
BLAST of Lsi04G004620 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33
Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
M+G L L + MK+E + PNEVTF+ VL GCS G +EG+ F SM ++ I P+L
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDL+ R L EAL I +MP+ + WG+L++ACR++ +ELGKFA+++++E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 121 LEAKNHSAYVLLSNIYA 138
LE + A VL+SNIYA
Sbjct: 542 LEPDHDGALVLMSNIYA 558
BLAST of Lsi04G004620 vs. ExPASy TrEMBL
Match:
A0A5A7SZ47 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00320 PE=3 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 6.8e-67
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+
Sbjct: 241 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 300
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYVLLSNIYADT N
Sbjct: 361 VEGKNHGAYVLLSNIYADTGN 381
BLAST of Lsi04G004620 vs. ExPASy TrEMBL
Match:
A0A1S3BFJ2 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo OX=3656 GN=LOC103489076 PE=3 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 6.8e-67
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+
Sbjct: 320 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 379
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYVLLSNIYADT N
Sbjct: 440 VEGKNHGAYVLLSNIYADTGN 460
BLAST of Lsi04G004620 vs. ExPASy TrEMBL
Match:
A0A6J1HYM9 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxima OX=3661 GN=LOC111467805 PE=3 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 3.4e-66
Identity = 121/141 (85.82%), Postives = 130/141 (92.20%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYG+KCL+L SLMKREGI PNE+TFI V+RGCSVVG DEGR HFDSMKRD+ I+PQL
Sbjct: 321 MNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKRDYDIEPQL 380
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+LDEALNFINTMP+KPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461
BLAST of Lsi04G004620 vs. ExPASy TrEMBL
Match:
A0A0A0KSJ7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604190 PE=3 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 5.7e-66
Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L S MK EGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+L
Sbjct: 241 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 300
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYV LSNIYADT N
Sbjct: 361 VEGKNHGAYVSLSNIYADTGN 381
BLAST of Lsi04G004620 vs. ExPASy TrEMBL
Match:
A0A6J1DA54 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica charantia OX=3673 GN=LOC111019070 PE=3 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYG+KCL+L SLMK+EG PNE+TFI ++RGCSVVG DEGR HFDSMKRD+GI+PQL
Sbjct: 321 MNGYGEKCLELFSLMKKEGAAPNEITFISIIRGCSVVGLVDEGRLHFDSMKRDYGIEPQL 380
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+LDEALNFIN MPLKPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINAMPLKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461
BLAST of Lsi04G004620 vs. NCBI nr
Match:
XP_038891785.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispida])
HSP 1 Score: 270.4 bits (690), Expect = 8.8e-69
Identity = 127/141 (90.07%), Postives = 132/141 (93.62%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L SLMKREGI PNE+TFI VLRGCSVVGF DEGRSHFDSMKRDHGI+PQL
Sbjct: 321 MNGYGQKCLELFSLMKREGIAPNEITFISVLRGCSVVGFVDEGRSHFDSMKRDHGIEPQL 380
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+LDEALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLVE 440
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LEAKN AYVLLSNIYAD KN
Sbjct: 441 LEAKNQGAYVLLSNIYADMKN 461
BLAST of Lsi04G004620 vs. NCBI nr
Match:
KAA0034379.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15540.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+
Sbjct: 241 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 300
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 301 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 360
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYVLLSNIYADT N
Sbjct: 361 VEGKNHGAYVLLSNIYADTGN 381
BLAST of Lsi04G004620 vs. NCBI nr
Match:
XP_008446300.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis melo])
HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L SLMKREGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+
Sbjct: 320 MNGYGQKCLELFSLMKREGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPKH 379
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYVLLSNIYADT N
Sbjct: 440 VEGKNHGAYVLLSNIYADTGN 460
BLAST of Lsi04G004620 vs. NCBI nr
Match:
XP_022968643.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima])
HSP 1 Score: 260.8 bits (665), Expect = 7.0e-66
Identity = 121/141 (85.82%), Postives = 130/141 (92.20%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYG+KCL+L SLMKREGI PNE+TFI V+RGCSVVG DEGR HFDSMKRD+ I+PQL
Sbjct: 321 MNGYGEKCLELFSLMKREGIAPNEITFISVIRGCSVVGLVDEGRLHFDSMKRDYDIEPQL 380
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+LDEALNFINTMP+KPHAGAWGALLNACRMYKNMELG+ ASRKLVE
Sbjct: 381 EHYGCMVDLYGRAGRLDEALNFINTMPIKPHAGAWGALLNACRMYKNMELGEVASRKLVE 440
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LEAKNH AYVLLSNIYADTKN
Sbjct: 441 LEAKNHGAYVLLSNIYADTKN 461
BLAST of Lsi04G004620 vs. NCBI nr
Match:
XP_004135465.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus])
HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNGYGQKCL+L S MK EGI PNE+TFI VL+GCSVVGF DEGRSHFDSMKRDHGI+P+L
Sbjct: 320 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 379
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDLY R G+L+EALNFINTMPLKPHAGAWGALLNACRMYKNMELG+FASRKL+E
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
+E KNH AYV LSNIYADT N
Sbjct: 440 VEGKNHGAYVSLSNIYADTGN 460
BLAST of Lsi04G004620 vs. TAIR 10
Match:
AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 211.8 bits (538), Expect = 3.5e-55
Identity = 92/141 (65.25%), Postives = 119/141 (84.40%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
MNG+G+KCL+L SLMK++G+ PN VTF+ VLRGCSVVGF DEG+ HFDSM+ + GI+PQL
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGC+VDLY+R G+L++A++ I MP+KPHA W +LL+A RMYKN+ELG AS+K++E
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
Query: 121 LEAKNHSAYVLLSNIYADTKN 142
LE NH AYVLLSNIYAD+ +
Sbjct: 438 LETANHGAYVLLSNIYADSND 458
BLAST of Lsi04G004620 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 149.1 bits (375), Expect = 2.7e-36
Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = 0
Query: 2 NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQLE 61
+G+G+K + L M EG+ P+ +TF+ +L CS G DEG+ F+ M+ D+GI P L+
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 62 HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
HYGCMVD+Y R GQL+ AL FI +M L+P A WGALL+ACR++ N++LGK AS L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 122 EAKNHSAYVLLSNIYA 138
E ++ +VLLSN+YA
Sbjct: 650 EPEHVGYHVLLSNMYA 665
BLAST of Lsi04G004620 vs. TAIR 10
Match:
AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 146.4 bits (368), Expect = 1.8e-35
Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
+NG ++ L MK + +VPN VTF+ +L CS G EG F+SM RD+G+ P+
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHY CMVDL R G++ EA +FI+ MP+KP A AWGALL+ACR++K ++L + KL+
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509
Query: 121 LEAKNHSAYVLLSNIYAD 139
+E + S YVLLSNIYAD
Sbjct: 510 MEPEKSSVYVLLSNIYAD 527
BLAST of Lsi04G004620 vs. TAIR 10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 144.8 bits (364), Expect = 5.2e-35
Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 2 NGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQLE 61
+G+ + L+ + M EG+ PNEVT++ +L CS VG EG HF+SM DH I+P++E
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 62 HYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVEL 121
HY CMVDL R G L +A FINTMP + W L ACR++ N ELGK A+RK++EL
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 122 EAKNHSAYVLLSNIYA 138
+ +AY+ LSNIYA
Sbjct: 673 DPNEPAAYIQLSNIYA 688
BLAST of Lsi04G004620 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 0
Query: 1 MNGYGQKCLKLVSLMKREGIVPNEVTFIYVLRGCSVVGFFDEGRSHFDSMKRDHGIQPQL 60
M+G L L + MK+E + PNEVTF+ VL GCS G +EG+ F SM ++ I P+L
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 61 EHYGCMVDLYSRVGQLDEALNFINTMPLKPHAGAWGALLNACRMYKNMELGKFASRKLVE 120
EHYGCMVDL+ R L EAL I +MP+ + WG+L++ACR++ +ELGKFA+++++E
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 121 LEAKNHSAYVLLSNIYA 138
LE + A VL+SNIYA
Sbjct: 542 LEPDHDGALVLMSNIYA 558
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FND7 | 4.9e-54 | 65.25 | Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... | [more] |
O81767 | 3.9e-35 | 50.00 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Q9LND4 | 2.5e-34 | 49.28 | Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop... | [more] |
Q5G1T1 | 7.3e-34 | 48.53 | Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... | [more] |
O23337 | 2.1e-33 | 48.91 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SZ47 | 6.8e-67 | 85.82 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3BFJ2 | 6.8e-67 | 85.82 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo O... | [more] |
A0A6J1HYM9 | 3.4e-66 | 85.82 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita maxi... | [more] |
A0A0A0KSJ7 | 5.7e-66 | 84.40 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... | [more] |
A0A6J1DA54 | 1.3e-65 | 84.40 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica char... | [more] |
Match Name | E-value | Identity | Description | |
XP_038891785.1 | 8.8e-69 | 90.07 | putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispid... | [more] |
KAA0034379.1 | 1.4e-66 | 85.82 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... | [more] |
XP_008446300.1 | 1.4e-66 | 85.82 | PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucum... | [more] |
XP_022968643.1 | 7.0e-66 | 85.82 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita maxima... | [more] |
XP_004135465.1 | 1.2e-65 | 84.40 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT5G40405.1 | 3.5e-55 | 65.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 2.7e-36 | 50.00 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G06140.1 | 1.8e-35 | 49.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49170.1 | 5.2e-35 | 48.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G14820.1 | 1.5e-34 | 48.91 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |