Homology
BLAST of Lsi04G004610 vs. ExPASy Swiss-Prot
Match:
Q9FND7 (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 8.2e-56
Identity = 99/128 (77.34%), Postives = 111/128 (86.72%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP+Y I+ +W +IS+RL+L GY A+T PV+FDI EEEKEDALC H
Sbjct: 485 VNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLH 544
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEK AIAFG++SLKE +PIRIVKNLRVC DCH V+ MISKIFNREIIVRDRNRFHHFKDG
Sbjct: 545 SEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 604
Query: 124 ECSCKDFW 131
CSC FW
Sbjct: 605 HCSCNGFW 612
BLAST of Lsi04G004610 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 6.3e-40
Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDIEE-EKEDALCKH 63
+ +VHEF GD+ H + I T+ +IS+R+K GYV NTN VL D+EE EKE +L H
Sbjct: 505 IENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVH 564
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SE++AIA+GLIS K G P++I KNLRVC DCH VTK+ISKI R+I++RDRNRFHHF DG
Sbjct: 565 SERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDG 624
Query: 124 ECSCKDFW 131
CSC DFW
Sbjct: 625 SCSCGDFW 632
BLAST of Lsi04G004610 vs. ExPASy Swiss-Prot
Match:
Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 4.1e-39
Identity = 75/128 (58.59%), Postives = 95/128 (74.22%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
V G VHEF VGD+S + I + EI +RL+ GYV +T VL D+ E++KE AL H
Sbjct: 446 VEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYH 505
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEK+AIAF L+ + G P+RI+KNLR+C DCH V KMISK+F+REI+VRD NRFHHF+DG
Sbjct: 506 SEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDG 565
Query: 124 ECSCKDFW 131
CSC+DFW
Sbjct: 566 SCSCRDFW 573
BLAST of Lsi04G004610 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 5.3e-39
Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
V G + F VGDKSHPRY+ IE I RLK G+VAN + L D+ +EE E+ LC H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SE++AIA+GLIS +G P+RI KNLR C +CH TK+ISK+ +REI+VRD NRFHHFKDG
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 124 ECSCKDFW 131
CSC D+W
Sbjct: 687 VCSCGDYW 694
BLAST of Lsi04G004610 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 161.4 bits (407), Expect = 6.9e-39
Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 0
Query: 1 MCNVNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDAL 60
+ V VHEF +GDKSHP+ DAI E++ RL+ GYV + V D+ EEEKE+A+
Sbjct: 465 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAV 524
Query: 61 CKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHF 120
HSEK+AIAF LIS E PI +VKNLRVC DCH K++SK++NREI+VRDR+RFHHF
Sbjct: 525 VYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHF 584
Query: 121 KDGECSCKDFW 131
K+G CSC+D+W
Sbjct: 585 KNGSCSCQDYW 595
BLAST of Lsi04G004610 vs. ExPASy TrEMBL
Match:
A0A6J1DA54 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica charantia OX=3673 GN=LOC111019070 PE=3 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 3.7e-67
Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WG+ISKRLKL GYVANTNPVLFDI EEEKEDALCKH
Sbjct: 488 VNGEVHEFFVGDKSHPNYDAIETMWGDISKRLKLAGYVANTNPVLFDIEEEEKEDALCKH 547
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHF+DG
Sbjct: 548 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFRDG 607
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 608 ECSCKDFW 615
BLAST of Lsi04G004610 vs. ExPASy TrEMBL
Match:
A0A5A7SZ47 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00320 PE=3 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WGEISKRLKL GYVA+TN VLFDI EEEKEDALCKH
Sbjct: 408 VNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 467
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF REIIVRDRNRFHHFKDG
Sbjct: 468 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHHFKDG 527
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 528 ECSCKDFW 535
BLAST of Lsi04G004610 vs. ExPASy TrEMBL
Match:
A0A1S3BFJ2 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo OX=3656 GN=LOC103489076 PE=3 SV=1)
HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WGEISKRLKL GYVA+TN VLFDI EEEKEDALCKH
Sbjct: 487 VNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 546
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF REIIVRDRNRFHHFKDG
Sbjct: 547 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHHFKDG 606
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 607 ECSCKDFW 614
BLAST of Lsi04G004610 vs. ExPASy TrEMBL
Match:
A0A6J1FZH3 (putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita moschata OX=3662 GN=LOC111449343 PE=3 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP Y AIE +WGEISKRLKL GYVANTNPV+FD+ EEEKEDALCKH
Sbjct: 488 VNGEVHEFFVGDKSHPSYKAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEKEDALCKH 547
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGL+S++EGLPIR+VKNLRVCWDCHDVTKMISK+FNREII+RDRNRFHHF+DG
Sbjct: 548 SEKMAIAFGLMSVEEGLPIRVVKNLRVCWDCHDVTKMISKLFNREIIMRDRNRFHHFRDG 607
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 608 ECSCKDFW 615
BLAST of Lsi04G004610 vs. ExPASy TrEMBL
Match:
A0A0A0KSJ7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604190 PE=3 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 116/128 (90.62%), Postives = 120/128 (93.75%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFF GDKSHP YD IET+WGEISKRLKL GYVA+TN VLFDI EEEKEDALCKH
Sbjct: 408 VNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 467
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGL SLKEGLPIRIVKNLR+CWDCHDV+KMISKIF REIIVRDRNRFHHFKDG
Sbjct: 468 SEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDG 527
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 528 ECSCKDFW 535
BLAST of Lsi04G004610 vs. NCBI nr
Match:
XP_022151045.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Momordica charantia])
HSP 1 Score: 263.8 bits (673), Expect = 7.6e-67
Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WG+ISKRLKL GYVANTNPVLFDI EEEKEDALCKH
Sbjct: 488 VNGEVHEFFVGDKSHPNYDAIETMWGDISKRLKLAGYVANTNPVLFDIEEEEKEDALCKH 547
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHF+DG
Sbjct: 548 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFRDG 607
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 608 ECSCKDFW 615
BLAST of Lsi04G004610 vs. NCBI nr
Match:
KAA0034379.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15540.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WGEISKRLKL GYVA+TN VLFDI EEEKEDALCKH
Sbjct: 408 VNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 467
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF REIIVRDRNRFHHFKDG
Sbjct: 468 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHHFKDG 527
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 528 ECSCKDFW 535
BLAST of Lsi04G004610 vs. NCBI nr
Match:
XP_008446300.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis melo])
HSP 1 Score: 258.5 bits (659), Expect = 3.2e-65
Identity = 121/128 (94.53%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP YDAIET+WGEISKRLKL GYVA+TN VLFDI EEEKEDALCKH
Sbjct: 487 VNGEVHEFFVGDKSHPSYDAIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKH 546
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF REIIVRDRNRFHHFKDG
Sbjct: 547 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFEREIIVRDRNRFHHFKDG 606
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 607 ECSCKDFW 614
BLAST of Lsi04G004610 vs. NCBI nr
Match:
XP_038891785.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispida])
HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP Y AIET+WGEIS++LKL GYVANTNPVLFDI EEEKEDALCKH
Sbjct: 488 VNGEVHEFFVGDKSHPSYHAIETMWGEISQQLKLAGYVANTNPVLFDIEEEEKEDALCKH 547
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIF+REIIVRDRNRFHHFKDG
Sbjct: 548 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFDREIIVRDRNRFHHFKDG 607
Query: 124 ECSCKDFW 131
+CSCKDFW
Sbjct: 608 DCSCKDFW 615
BLAST of Lsi04G004610 vs. NCBI nr
Match:
XP_022944963.1 (putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita moschata])
HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63
Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP Y AIE +WGEISKRLKL GYVANTNPV+FD+ EEEKEDALCKH
Sbjct: 488 VNGEVHEFFVGDKSHPSYKAIERMWGEISKRLKLAGYVANTNPVMFDVEEEEKEDALCKH 547
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEKMAIAFGL+S++EGLPIR+VKNLRVCWDCHDVTKMISK+FNREII+RDRNRFHHF+DG
Sbjct: 548 SEKMAIAFGLMSVEEGLPIRVVKNLRVCWDCHDVTKMISKLFNREIIMRDRNRFHHFRDG 607
Query: 124 ECSCKDFW 131
ECSCKDFW
Sbjct: 608 ECSCKDFW 615
BLAST of Lsi04G004610 vs. TAIR 10
Match:
AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 217.6 bits (553), Expect = 5.8e-57
Identity = 99/128 (77.34%), Postives = 111/128 (86.72%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
VNGEVHEFFVGDKSHP+Y I+ +W +IS+RL+L GY A+T PV+FDI EEEKEDALC H
Sbjct: 485 VNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLH 544
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEK AIAFG++SLKE +PIRIVKNLRVC DCH V+ MISKIFNREIIVRDRNRFHHFKDG
Sbjct: 545 SEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 604
Query: 124 ECSCKDFW 131
CSC FW
Sbjct: 605 HCSCNGFW 612
BLAST of Lsi04G004610 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 164.9 bits (416), Expect = 4.5e-41
Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDIEE-EKEDALCKH 63
+ +VHEF GD+ H + I T+ +IS+R+K GYV NTN VL D+EE EKE +L H
Sbjct: 505 IENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVH 564
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SE++AIA+GLIS K G P++I KNLRVC DCH VTK+ISKI R+I++RDRNRFHHF DG
Sbjct: 565 SERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDG 624
Query: 124 ECSCKDFW 131
CSC DFW
Sbjct: 625 SCSCGDFW 632
BLAST of Lsi04G004610 vs. TAIR 10
Match:
AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 162.2 bits (409), Expect = 2.9e-40
Identity = 75/128 (58.59%), Postives = 95/128 (74.22%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
V G VHEF VGD+S + I + EI +RL+ GYV +T VL D+ E++KE AL H
Sbjct: 446 VEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYH 505
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SEK+AIAF L+ + G P+RI+KNLR+C DCH V KMISK+F+REI+VRD NRFHHF+DG
Sbjct: 506 SEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDG 565
Query: 124 ECSCKDFW 131
CSC+DFW
Sbjct: 566 SCSCRDFW 573
BLAST of Lsi04G004610 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 161.8 bits (408), Expect = 3.8e-40
Identity = 75/128 (58.59%), Postives = 93/128 (72.66%), Query Frame = 0
Query: 4 VNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDALCKH 63
V G + F VGDKSHPRY+ IE I RLK G+VAN + L D+ +EE E+ LC H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 64 SEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHFKDG 123
SE++AIA+GLIS +G P+RI KNLR C +CH TK+ISK+ +REI+VRD NRFHHFKDG
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 124 ECSCKDFW 131
CSC D+W
Sbjct: 687 VCSCGDYW 694
BLAST of Lsi04G004610 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 161.4 bits (407), Expect = 4.9e-40
Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 0
Query: 1 MCNVNGEVHEFFVGDKSHPRYDAIETIWGEISKRLKLVGYVANTNPVLFDI-EEEKEDAL 60
+ V VHEF +GDKSHP+ DAI E++ RL+ GYV + V D+ EEEKE+A+
Sbjct: 465 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAV 524
Query: 61 CKHSEKMAIAFGLISLKEGLPIRIVKNLRVCWDCHDVTKMISKIFNREIIVRDRNRFHHF 120
HSEK+AIAF LIS E PI +VKNLRVC DCH K++SK++NREI+VRDR+RFHHF
Sbjct: 525 VYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHF 584
Query: 121 KDGECSCKDFW 131
K+G CSC+D+W
Sbjct: 585 KNGSCSCQDYW 595
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FND7 | 8.2e-56 | 77.34 | Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... | [more] |
Q9SZT8 | 6.3e-40 | 60.16 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Q683I9 | 4.1e-39 | 58.59 | Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... | [more] |
Q9LTV8 | 5.3e-39 | 58.59 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
A8MQA3 | 6.9e-39 | 57.25 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DA54 | 3.7e-67 | 95.31 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Momordica char... | [more] |
A0A5A7SZ47 | 1.5e-65 | 94.53 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A1S3BFJ2 | 1.5e-65 | 94.53 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucumis melo O... | [more] |
A0A6J1FZH3 | 1.1e-63 | 88.28 | putative pentatricopeptide repeat-containing protein At5g40405 OS=Cucurbita mosc... | [more] |
A0A0A0KSJ7 | 2.5e-63 | 90.63 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... | [more] |
Match Name | E-value | Identity | Description | |
XP_022151045.1 | 7.6e-67 | 95.31 | putative pentatricopeptide repeat-containing protein At5g40405 [Momordica charan... | [more] |
KAA0034379.1 | 3.2e-65 | 94.53 | putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ... | [more] |
XP_008446300.1 | 3.2e-65 | 94.53 | PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucum... | [more] |
XP_038891785.1 | 9.3e-65 | 92.97 | putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispid... | [more] |
XP_022944963.1 | 2.3e-63 | 88.28 | putative pentatricopeptide repeat-containing protein At5g40405 [Cucurbita moscha... | [more] |
Match Name | E-value | Identity | Description | |
AT5G40405.1 | 5.8e-57 | 77.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37380.1 | 4.5e-41 | 60.16 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G62890.1 | 2.9e-40 | 58.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G12770.1 | 3.8e-40 | 58.59 | mitochondrial editing factor 22 | [more] |
AT4G21065.1 | 4.9e-40 | 57.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |