Lsi04G004120 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAAACTGTGTAATGAAAATGGCAGGCCAAACCCAACAATTGGTTATGATTTTTCTCCTTGTCTCTCTACTCATCTTCTTCAACACTGTCTCTGCATCAAGTACACAATCCTCTAACTTTGTTTAATGAAATTACTTCCTTTATAATTCTCACTTTATCTTAATAAGTTTCTATGTTCAGGGGCAGCAATTATGATCCATCTTGGCCAGGATTTTCCAGCTTTCCATGGTGCACACCAGGTATATATATATATGTATGATTGATTTATAACTGATGTGTATTATTAAAAGAAATGAGTTAGGACTGACGGATTTCTTCATTGGCAGAAGAATCAGCCACTGATGAAGTTGTTGAATGGCAGAATGGATTTGCAGTACAATGACTATCCAATATTTGGGGCTAATCCTCGCCACACTCCAAAGCCAACGGGGAAAGTTTGA ATCAAAACTGTGTAATGAAAATGGCAGGCCAAACCCAACAATTGGTTATGATTTTTCTCCTTGTCTCTCTACTCATCTTCTTCAACACTGTCTCTGCATCAAGGGCAGCAATTATGATCCATCTTGGCCAGGATTTTCCAGCTTTCCATGGTGCACACCAGAAGAATCAGCCACTGATGAAGTTGTTGAATGGCAGAATGGATTTGCAGTACAATGACTATCCAATATTTGGGGCTAATCCTCGCCACACTCCAAAGCCAACGGGGAAAGTTTGA ATGAAAATGGCAGGCCAAACCCAACAATTGGTTATGATTTTTCTCCTTGTCTCTCTACTCATCTTCTTCAACACTGTCTCTGCATCAAGGGCAGCAATTATGATCCATCTTGGCCAGGATTTTCCAGCTTTCCATGGTGCACACCAGAAGAATCAGCCACTGATGAAGTTGTTGAATGGCAGAATGGATTTGCAGTACAATGACTATCCAATATTTGGGGCTAATCCTCGCCACACTCCAAAGCCAACGGGGAAAGTTTGA MKMAGQTQQLVMIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV Homology
BLAST of Lsi04G004120 vs. ExPASy TrEMBL
Match: A0A1S3BEE6 (uncharacterized protein LOC103489129 OS=Cucumis melo OX=3656 GN=LOC103489129 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.9e-28 Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Lsi04G004120 vs. ExPASy TrEMBL
Match: A0A0A0KQN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605220 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.5e-28 Identity = 68/85 (80.00%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of Lsi04G004120 vs. ExPASy TrEMBL
Match: A0A5A7SX31 (Putative lipoprotein yfhM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00360 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.2e-27 Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of Lsi04G004120 vs. ExPASy TrEMBL
Match: B9S8Y1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0836660 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04 Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of Lsi04G004120 vs. ExPASy TrEMBL
Match: A0A5N5LR04 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_012623 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.0e-04 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Lsi04G004120 vs. NCBI nr
Match: XP_008446367.1 (PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]) HSP 1 Score: 134.0 bits (336), Expect = 6.0e-28 Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 0
BLAST of Lsi04G004120 vs. NCBI nr
Match: KGN51928.1 (hypothetical protein Csa_009059 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27 Identity = 68/85 (80.00%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of Lsi04G004120 vs. NCBI nr
Match: KAA0034426.1 (putative lipoprotein yfhM [Cucumis melo var. makuwa] >TYK17708.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]) HSP 1 Score: 130.6 bits (327), Expect = 6.6e-27 Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of Lsi04G004120 vs. NCBI nr
Match: KAG7032221.1 (hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111.3 bits (277), Expect = 4.2e-21 Identity = 57/84 (67.86%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Lsi04G004120 vs. NCBI nr
Match: KAG6601439.1 (hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.7 bits (252), Expect = 3.3e-18 Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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