Lsi04G004090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G004090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	R2R3-MYB transcription factor
Location	chr04: 3990740 .. 3993143 (+)
RNA-Seq Expression	Lsi04G004090
Synteny	Lsi04G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATGTTGGTTGATGAAGATGAAGAAAGTTTGAATCTTGATCTCAACTGTGCAGCAGCAGAAATTGTTTCTTCTTCTTCTTCTTCTTCTCATGAGAGTTGTGAAAATGGGAGAGGTTTTTGGAACTTCCCATTTTCTTGTGAGTCTATGATGACTAGAAGCTCAGAGATTGATTTTGGGGATAATGGGAATACTACTTTTAATAATAATAATAATAATGGAGCTTCTGATTTCAGTGATGGATTTGTTGAAAATATCAATGAATCCTTGAATCAAACTGCTGCTAACCCAACTTCTTGTTCCAATAATACCCCCAGTACTGGAGCTCAGTCTAGACTCTGTGCTAGAGGCCATTGGAGGCCTGCAGAGGACACTAAGTTGAGAGAGCTTGTAGCCCTTTATGGCCCTCAAAATTGGAACCTCATTGCAGAGAAGCTAGAAGGAAGATCTGGTAAGACACCCACAATTTTATTACCTTTTTCTTTTGAGTTCTAATTCAATGTTTTTAACTGTCTATCTGTCAGATTTCAAATCTGACTGTTTAAGATATATTTCTTAACCAGTCCTATGTTTTAACTGAAGGTAAAAGTTGCAGATTGAGATGGTTTAATCAGTTAGATCCAAGGATAAATAGAAGGGCATTTAGTGAAGAAGAAGAAGAGAGGCTAATGCAAGCACATAGGATATATGGAAACAAATGGGCAATGATTGCAAGGCTATTTCCAGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTTATAATGGCAAGGAAATATAGAGAGCAATCTCGTTGTTATAGAAGGAGGAAGTTGAGTCAATCTGTATACAGAAAAATGGAGCAAGATTTGAGTTTCCTTAATCTTCCCAAAGATAATCATGACATAACAACAGCAGCAGCAGCAGCAGCAACAACGACTTCTTGTTCTTCTTTTGGAAACTTTGAGGGTTGTGTTGATTATGGATTTTTAAGCCAAATGGCTATTGGTGGAGGAGAAGCAATGTCAAGTAACTACAACATTCCCAACAATCCTTACTTCTCATCATGTGCACATCTTTCAACTCTTAATGTCCTTCCAGGTTTCATTTTATCTCATTCTAAAACCTCACTATTTTTTTTAAACTTATATGCATATATACCATACTCAATTTGCTAGCTTATCAAGAGTATTGATATAATTAAGGCTTTGTTTGATAATTCTCGAATTTTTTAAATTTAAGTCTGTTAACACTCGTTTCACTTTTAAAATTTTTAATTTGTTATCTACTTTTTACTAATGTTTTTTTTTTAATAAGCGAATGTTTGAAAACTTAAAAATATGGTTCTTAAAACTTGTTTTTTTATTTTAGAATTTGATTCAGAATTTAATTCTTTTACTTAAATATTCAAACAGTAAGAAACTTAATTTACAAAAATTAAACAGAGCATCAATTTATCATATCTAATTCGCTTAATTTTTTTTTTTTTTTTTTTGCGTTTTGTTCTAATTTTTCAAAGTCTCATTAACTAGGTTGTTGTAATACATACAAATGATTAAGATTTTGTTTGATAATGACTTTCTTTTTTAAATTTATGTTTGTTTTATTCTAATTTTTTTGGTTATAACTTTTACTTTTGTTAAAGAAACACCTGAATTTTTAGTCAAGTTCTAAATTTTTTCTGTTTTCAATTCTTAACTCAATTTGGTTTTTTTTTAACATGGATAAAAAGTAGTAACAAAAAATAAAATATTATGTGTAGAAGTAGTCTTCATAATTAAACTTAATTTTTAGAAACCAAATAAGTATAAATTTAATATAAATTATCAACTTTTGATTTTGATGTAGAGATGTTAATGCCTTCTTCCATTAACGTTGCAAAAATCACTACTTGTGTTTTATATTATATAAAACAAGAAGTAGTATAAGAACATAAGTAAATAATGAAATACAGAATAATCCATCAATTTTGAGTTTTGTAGTTTTGAGTAAATAAGAAGTGTAAATTCAATTCATTAACGTATGAATTTGGCGTTGGTCATTATGATTCGCAGATCCCAAGAGCAGATTTTGGAATGGAACAAGCAATGGATTTCTAGTACCACGAAGCCACCACCAGTATCAGGCGTATAACACGGCGGCGCCACCGTCAAACGACGGCGTTGGGGGATCACAAGCGGCCAGAGTTGGATCTTCAACGGTAACGGCGGAGGCAAGAAAACAATCACCAAGATTTATCGACTTTCTTGGAGTTGGAGCCACATGAAAATGTGACGTGGAATTTTGGAGAGATTTAATTTTTAAGAGAATGGATTAGAGAGGTAAGTGAATCGTACAGGGTGGTGACAGTGGTGGAACATATGTTTATATTATTATTATTATTATTATTATTCACATAATAGACTAAATGTATCCTAAA

mRNA sequence

ATGGGGATGTTGGTTGATGAAGATGAAGAAAGTTTGAATCTTGATCTCAACTGTGCAGCAGCAGAAATTGTTTCTTCTTCTTCTTCTTCTTCTCATGAGAGTTGTGAAAATGGGAGAGGTTTTTGGAACTTCCCATTTTCTTGTGAGTCTATGATGACTAGAAGCTCAGAGATTGATTTTGGGGATAATGGGAATACTACTTTTAATAATAATAATAATAATGGAGCTTCTGATTTCAGTGATGGATTTGTTGAAAATATCAATGAATCCTTGAATCAAACTGCTGCTAACCCAACTTCTTGTTCCAATAATACCCCCAGTACTGGAGCTCAGTCTAGACTCTGTGCTAGAGGCCATTGGAGGCCTGCAGAGGACACTAAGTTGAGAGAGCTTGTAGCCCTTTATGGCCCTCAAAATTGGAACCTCATTGCAGAGAAGCTAGAAGGAAGATCTGGTAAAAGTTGCAGATTGAGATGGTTTAATCAGTTAGATCCAAGGATAAATAGAAGGGCATTTAGTGAAGAAGAAGAAGAGAGGCTAATGCAAGCACATAGGATATATGGAAACAAATGGGCAATGATTGCAAGGCTATTTCCAGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTTATAATGGCAAGGAAATATAGAGAGCAATCTCGTTGTTATAGAAGGAGGAAGTTGAGTCAATCTGTATACAGAAAAATGGAGCAAGATTTGAGTTTCCTTAATCTTCCCAAAGATAATCATGACATAACAACAGCAGCAGCAGCAGCAGCAACAACGACTTCTTGTTCTTCTTTTGGAAACTTTGAGGGTTGTGTTGATTATGGATTTTTAAGCCAAATGGCTATTGGTGGAGGAGAAGCAATGTCAAGTAACTACAACATTCCCAACAATCCTTACTTCTCATCATGTGCACATCTTTCAACTCTTAATGTCCTTCCAGATCCCAAGAGCAGATTTTGGAATGGAACAAGCAATGGATTTCTAGTACCACGAAGCCACCACCAGTATCAGGCGTATAACACGGCGGCGCCACCGTCAAACGACGGCGTTGGGGGATCACAAGCGGCCAGAGTTGGATCTTCAACGGTAACGGCGGAGGCAAGAAAACAATCACCAAGATTTATCGACTTTCTTGGAGTTGGAGCCACATGAAAATGTGACGTGGAATTTTGGAGAGATTTAATTTTTAAGAGAATGGATTAGAGAGGTAAGTGAATCGTACAGGGTGGTGACAGTGGTGGAACATATGTTTATATTATTATTATTATTATTATTATTCACATAATAGACTAAATGTATCCTAAA

Coding sequence (CDS)

ATGGGGATGTTGGTTGATGAAGATGAAGAAAGTTTGAATCTTGATCTCAACTGTGCAGCAGCAGAAATTGTTTCTTCTTCTTCTTCTTCTTCTCATGAGAGTTGTGAAAATGGGAGAGGTTTTTGGAACTTCCCATTTTCTTGTGAGTCTATGATGACTAGAAGCTCAGAGATTGATTTTGGGGATAATGGGAATACTACTTTTAATAATAATAATAATAATGGAGCTTCTGATTTCAGTGATGGATTTGTTGAAAATATCAATGAATCCTTGAATCAAACTGCTGCTAACCCAACTTCTTGTTCCAATAATACCCCCAGTACTGGAGCTCAGTCTAGACTCTGTGCTAGAGGCCATTGGAGGCCTGCAGAGGACACTAAGTTGAGAGAGCTTGTAGCCCTTTATGGCCCTCAAAATTGGAACCTCATTGCAGAGAAGCTAGAAGGAAGATCTGGTAAAAGTTGCAGATTGAGATGGTTTAATCAGTTAGATCCAAGGATAAATAGAAGGGCATTTAGTGAAGAAGAAGAAGAGAGGCTAATGCAAGCACATAGGATATATGGAAACAAATGGGCAATGATTGCAAGGCTATTTCCAGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTTATAATGGCAAGGAAATATAGAGAGCAATCTCGTTGTTATAGAAGGAGGAAGTTGAGTCAATCTGTATACAGAAAAATGGAGCAAGATTTGAGTTTCCTTAATCTTCCCAAAGATAATCATGACATAACAACAGCAGCAGCAGCAGCAGCAACAACGACTTCTTGTTCTTCTTTTGGAAACTTTGAGGGTTGTGTTGATTATGGATTTTTAAGCCAAATGGCTATTGGTGGAGGAGAAGCAATGTCAAGTAACTACAACATTCCCAACAATCCTTACTTCTCATCATGTGCACATCTTTCAACTCTTAATGTCCTTCCAGATCCCAAGAGCAGATTTTGGAATGGAACAAGCAATGGATTTCTAGTACCACGAAGCCACCACCAGTATCAGGCGTATAACACGGCGGCGCCACCGTCAAACGACGGCGTTGGGGGATCACAAGCGGCCAGAGTTGGATCTTCAACGGTAACGGCGGAGGCAAGAAAACAATCACCAAGATTTATCGACTTTCTTGGAGTTGGAGCCACATGA

Protein sequence

MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCENGRGFWNFPFSCESMMTRSSEIDFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVYRKMEQDLSFLNLPKDNHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGGEAMSSNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRSHHQYQAYNTAAPPSNDGVGGSQAARVGSSTVTAEARKQSPRFIDFLGVGAT

Homology

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BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 6.2e-59
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 109 GAQSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 168
           G Q +LCARGHWRPAED KL++LVA YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRIN
Sbjct: 41  GVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRIN 100

Query: 169 RRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRR 228
           RRAF+EEEEERLM AHR YGNKWA+IARLFPGRTDNAVKNHWHV+MAR++REQS  +RRR
Sbjct: 101 RRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRR 160

Query: 229 KLSQS 234
           K S S
Sbjct: 161 KPSSS 165

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BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.4e-57
Identity = 111/162 (68.52%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 69  NNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQSRLCARGHWRPAEDTKL 128
           +NNNN   S+   G  E             T    +  S+ ++  +  RGHWRPAED KL
Sbjct: 62  SNNNNPNFSNSESGKKET------------TDSGQSWSSSSSKPSVLGRGHWRPAEDVKL 121

Query: 129 RELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYG 188
           +ELV++YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YG
Sbjct: 122 KELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYG 181

Query: 189 NKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKL 231
           NKWAMIARLFPGRTDN+VKNHWHV+MARKYRE S  YRRRKL
Sbjct: 182 NKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]

BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-56
Identity = 123/215 (57.21%), Postives = 149/215 (69.30%), Query Frame = 0


Query: 25  SSSSSSSHESCENGRGFWNFPFSCESMMTRSSEIDFGDNGNTTFNNNNNNGASDFSDGFV 84
           SS SSSSH         +N    C  +M+           ++ + + N + A      + 
Sbjct: 19  SSLSSSSHH-------HYNQQQHC--IMSEDQHHSMDQTTSSDYFSLNIDNAQHLRSYYT 78

Query: 85  ENINESLNQTAANPTSCSNNTP----STGAQSRL-CARGHWRPAEDTKLRELVALYGPQN 144
            +  E +N   ++ ++C+        S G  S+   +RGHWRPAEDTKL+ELVA+YGPQN
Sbjct: 79  SHREEDMNPNLSDYSNCNKKDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQN 138

Query: 145 WNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFP 204
           WNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIARLFP
Sbjct: 139 WNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFP 198

Query: 205 GRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSV 235
           GRTDN+VKNHWHVIMARK+REQS  YRRRK   S+
Sbjct: 199 GRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSL 224

[Close]

BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-48
Identity = 85/110 (77.27%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 114 LCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFS 173
           +C+RGHWRPAED KLRELV  +GP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  F+
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 174 EEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSR 224
           EEEEERL+ +HRI+GN+W++IAR FPGRTDNAVKNHWHVIMAR+ RE+S+
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSK 111

[Close]

BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.9e-48
Identity = 111/216 (51.39%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 62  DNGNTTFNNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQSRLCARGHWR 121
           +N + + N+ +N  AS      +E+ +E  N+   N  S      S G  +++C+RGHWR
Sbjct: 44  NNPSISRNHPHNKSAS-----VLESEDEHGNERGENEKSLRMRGKS-GINTKVCSRGHWR 103

Query: 122 PAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLM 181
           P ED KL+ELVA +GPQNWNLI+  L GRSGKSCRLRWFNQLDPRIN+RAF+EEEE RL+
Sbjct: 104 PTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFTEEEEFRLL 163

Query: 182 QAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVYRKMEQD 241
            AHR YGNKWA+I+RLFPGRTDNAVKNHWHVIMAR+ RE  R  +R++   ++ R  E  
Sbjct: 164 AAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQR--QRQQPPPTLSRDAEMT 223

Query: 242 LS---------FLNLPKDNHDITTAAAAAATTTSCS 269
           +S         F+N   D+ D+   +A +  TT  S
Sbjct: 224 VSSSCRYNQGKFINEEDDDDDV---SAVSTCTTELS 248

[Close]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL
Match: A0A5A7SUV5 (Transcription factor MYB108 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00340 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 4.0e-162
Identity = 321/399 (80.45%), Postives = 328/399 (82.21%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM  DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFTDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD-NHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAI-GGGEAM 300
           RKME+DLSFLN+PKD NH     AAAAATTTSCSSFGNFEGCVDY FL QM I GGGE M
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETM 300

Query: 301 SSNYNI-PNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTAAPP 360
           SSNYNI PN PYF+SCAHLSTLNVLPDPKSRFW GTSNGFLVPRS  HHQY+AYNTAAPP
Sbjct: 301 SSNYNITPNYPYFNSCAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPP 360

Query: 361 SNDGVGGSQAARVGSSTVTAEAR-KQSPRFIDFLGVGAT 389
           SN GV        GSS+VT E R KQSPRFIDFLGVGAT
Sbjct: 361 SNGGV-------EGSSSVTVEGRSKQSPRFIDFLGVGAT 366

[Close]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL
Match: A0A1S3BEX0 (transcription factor MYB108 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489131 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 4.0e-162
Identity = 321/399 (80.45%), Postives = 328/399 (82.21%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM  DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFTDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD-NHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAI-GGGEAM 300
           RKME+DLSFLN+PKD NH     AAAAATTTSCSSFGNFEGCVDY FL QM I GGGE M
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETM 300

Query: 301 SSNYNI-PNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTAAPP 360
           SSNYNI PN PYF+SCAHLSTLNVLPDPKSRFW GTSNGFLVPRS  HHQY+AYNTAAPP
Sbjct: 301 SSNYNITPNYPYFNSCAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPP 360

Query: 361 SNDGVGGSQAARVGSSTVTAEAR-KQSPRFIDFLGVGAT 389
           SN GV        GSS+VT E R KQSPRFIDFLGVGAT
Sbjct: 361 SNGGV-------EGSSSVTVEGRSKQSPRFIDFLGVGAT 366

[Close]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL
Match: A0A0A0KQN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605730 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.5e-161
Identity = 320/401 (79.80%), Postives = 330/401 (82.29%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM +DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFIDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD--NHD-ITTAAAAAA-TTTSCSSFGNFEGCVDYGFLSQMAI-GGG 300
           RKME+DLSFLN+PKD  +HD ITTAAAA   TTTS SSFGNFEGCVDYGFL QM I GGG
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDTITTAAAATTITTTSSSSFGNFEGCVDYGFLRQMVIGGGG 300

Query: 301 EAMSSNYN-IPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTA 360
           E +SSNYN  PNNPYF+SCAHLSTLNVLPDPKSRFW GTSNGFLVPRS  HHQY+ YNTA
Sbjct: 301 ETLSSNYNTTPNNPYFNSCAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYETYNTA 360

Query: 361 APPSNDGVGGSQAARVGSSTVTAEARKQSPRFIDFLGVGAT 389
            PPSN GV        GSS+VT E RKQSPRFIDFLGVGAT
Sbjct: 361 VPPSNGGV-------EGSSSVTVEGRKQSPRFIDFLGVGAT 368

[Close]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL
Match: A0A1S4DW62 (myb-like protein Q isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489131 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.4e-145
Identity = 297/397 (74.81%), Postives = 303/397 (76.32%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM  DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFTDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD-NHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGGEAMS 300
           RKME+DLSFLN+PKD NH     AAAAATTTSCSSFGNFEGCVDY FL QM IGGG    
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETM 300

Query: 301 SNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTAAPPSN 360
           SN                       PKSRFW GTSNGFLVPRS  HHQY+AYNTAAPPSN
Sbjct: 301 SN-----------------------PKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPPSN 341

Query: 361 DGVGGSQAARVGSSTVTAEAR-KQSPRFIDFLGVGAT 389
            GV        GSS+VT E R KQSPRFIDFLGVGAT
Sbjct: 361 GGV-------EGSSSVTVEGRSKQSPRFIDFLGVGAT 341

[Close]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL
Match: A0A6J1HTU7 (transcription factor CSA-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467417 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136
Identity = 279/403 (69.23%), Postives = 302/403 (74.94%), Query Frame = 0


Query: 1   MGMLVDED----------EESLNLDLNCAAAEIVSSSSSSSHESCENGRGFWNFPFSCES 60
           MGML D+           EESL LDLN A   IVSSS  SS E  ENGRGFWNFPFSCES
Sbjct: 1   MGMLDDDHDDHDDFGVGVEESLKLDLNRA---IVSSSQESS-EVLENGRGFWNFPFSCES 60

Query: 61  MMTRSSEIDFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGA 120
            MTRSSE                   +DFSDGFVEN+NE LN+             ++GA
Sbjct: 61  -MTRSSE-------------------TDFSDGFVENMNEPLNK-------------ASGA 120

Query: 121 QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 180
           QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR
Sbjct: 121 QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 180

Query: 181 AFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKL 240
            FSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSR YRRRKL
Sbjct: 181 VFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRSYRRRKL 240

Query: 241 SQSVYRKMEQDLSFLNLPKDNHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGG 300
           +QSVYRKME+DLSFL LP +  +           T+ S F    G VDYGFL+QMA GGG
Sbjct: 241 NQSVYRKMEEDLSFLVLPNEQDN--------RHPTARSPF----GAVDYGFLTQMATGGG 300

Query: 301 EAMSSNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRSHHQYQAYNTAAPP 360
           E+M+S++ + N P+FSSC+ LSTLNVLPDPKSRFW GT +GF+ PRSHHQYQ YNTAA  
Sbjct: 301 ESMNSHHRL-NQPFFSSCSPLSTLNVLPDPKSRFWEGTGHGFVEPRSHHQYQPYNTAALA 353

Query: 361 SNDGVGGSQAA-----RVGSSTVTAEARKQSPRFIDFLGVGAT 389
           SNDGVGGSQ A     R GSS+VTAE  KQ+P FIDFLGVGAT
Sbjct: 361 SNDGVGGSQTATSHVLRGGSSSVTAETTKQAPPFIDFLGVGAT 353

[Close]

BLAST of Lsi04G004090 vs. NCBI nr
Match: XP_038892944.1 (transcription factor MYB52-like [Benincasa hispida])

HSP 1 Score: 646.4 bits (1666), Expect = 1.6e-181
Identity = 339/395 (85.82%), Postives = 349/395 (88.35%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEI-----VSSSSSSSHESCENGRGFWNFPFSCESMMTRS 60
           M M VDEDEESLNLDLN AAA +      SSSSSSS ESCEN RGFWNFP SCESMMTRS
Sbjct: 1   MRMFVDEDEESLNLDLNSAAAIVSSSSSSSSSSSSSQESCENERGFWNFPLSCESMMTRS 60

Query: 61  SEIDFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQ-TAANPTSCSNNTPSTGAQSRL 120
           SE D G+N     NN NNNGASDFSDGFVENINESLNQ  AANPTSCSNNTPSTGAQSRL
Sbjct: 61  SETDVGNN-----NNYNNNGASDFSDGFVENINESLNQNNAANPTSCSNNTPSTGAQSRL 120

Query: 121 CARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSE 180
           CARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSE
Sbjct: 121 CARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSE 180

Query: 181 EEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSV 240
           EEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSV
Sbjct: 181 EEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSV 240

Query: 241 YRKMEQDLSFLNLPKDNHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGGEAMS 300
           YRKMEQDLSFLNLPKDNH+       A  TTSCSSFGNFEGCVDYGFL+Q        MS
Sbjct: 241 YRKMEQDLSFLNLPKDNHE------TAPPTTSCSSFGNFEGCVDYGFLNQ--------MS 300

Query: 301 SNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNG-TSNGFLVPRSHHQYQAYNTAAPPSND 360
           SNYN  N+PYFSSCAHLSTLNVLPDPKSRFWNG T+NGF+VP+SHHQY+AYNTAAPPSND
Sbjct: 301 SNYNSINHPYFSSCAHLSTLNVLPDPKSRFWNGTTNNGFVVPQSHHQYEAYNTAAPPSND 360

Query: 361 GVGGSQAARVGSSTVTAEARKQSPRFIDFLGVGAT 389
           GVGGS AA  GSS+VTAEARKQSPRFIDFLGVGAT
Sbjct: 361 GVGGSHAASGGSSSVTAEARKQSPRFIDFLGVGAT 376

[Close]

BLAST of Lsi04G004090 vs. NCBI nr
Match: XP_008446370.1 (PREDICTED: transcription factor MYB108 isoform X1 [Cucumis melo] >KAA0034428.1 transcription factor MYB108 isoform X1 [Cucumis melo var. makuwa] >TYK17706.1 transcription factor MYB108 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 580.9 bits (1496), Expect = 8.4e-162
Identity = 321/399 (80.45%), Postives = 328/399 (82.21%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM  DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFTDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD-NHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAI-GGGEAM 300
           RKME+DLSFLN+PKD NH     AAAAATTTSCSSFGNFEGCVDY FL QM I GGGE M
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETM 300

Query: 301 SSNYNI-PNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTAAPP 360
           SSNYNI PN PYF+SCAHLSTLNVLPDPKSRFW GTSNGFLVPRS  HHQY+AYNTAAPP
Sbjct: 301 SSNYNITPNYPYFNSCAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPP 360

Query: 361 SNDGVGGSQAARVGSSTVTAEAR-KQSPRFIDFLGVGAT 389
           SN GV        GSS+VT E R KQSPRFIDFLGVGAT
Sbjct: 361 SNGGV-------EGSSSVTVEGRSKQSPRFIDFLGVGAT 366

[Close]

BLAST of Lsi04G004090 vs. NCBI nr
Match: XP_011655686.1 (transcription factor MYB117 [Cucumis sativus] >KGN51930.1 hypothetical protein Csa_007847 [Cucumis sativus])

HSP 1 Score: 578.9 bits (1491), Expect = 3.2e-161
Identity = 320/401 (79.80%), Postives = 330/401 (82.29%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM +DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFIDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD--NHD-ITTAAAAAA-TTTSCSSFGNFEGCVDYGFLSQMAI-GGG 300
           RKME+DLSFLN+PKD  +HD ITTAAAA   TTTS SSFGNFEGCVDYGFL QM I GGG
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDTITTAAAATTITTTSSSSFGNFEGCVDYGFLRQMVIGGGG 300

Query: 301 EAMSSNYN-IPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTA 360
           E +SSNYN  PNNPYF+SCAHLSTLNVLPDPKSRFW GTSNGFLVPRS  HHQY+ YNTA
Sbjct: 301 ETLSSNYNTTPNNPYFNSCAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYETYNTA 360

Query: 361 APPSNDGVGGSQAARVGSSTVTAEARKQSPRFIDFLGVGAT 389
            PPSN GV        GSS+VT E RKQSPRFIDFLGVGAT
Sbjct: 361 VPPSNGGV-------EGSSSVTVEGRKQSPRFIDFLGVGAT 368

[Close]

BLAST of Lsi04G004090 vs. NCBI nr
Match: XP_016900224.1 (PREDICTED: myb-like protein Q isoform X2 [Cucumis melo])

HSP 1 Score: 524.6 bits (1350), Expect = 7.1e-145
Identity = 297/397 (74.81%), Postives = 303/397 (76.32%), Query Frame = 0


Query: 1   MGMLVDEDEESLNLDLNCAAAEIVSSSSSSSHESCE--NGRGFWNFPFSCESMMTRSSEI 60
           MGM  DEDEES NLDLN AA       SSSS ESCE  NGR FWNFPFSCES        
Sbjct: 1   MGMFTDEDEESFNLDLNSAAI-----FSSSSQESCEEINGRAFWNFPFSCES-------- 60

Query: 61  DFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAA-NPTSCSNNTP--STGAQSRLC 120
           D  +N     NNNNNNG S+FSDG        LNQ AA NPTSCSNNTP  STGAQSRLC
Sbjct: 61  DIVNN-----NNNNNNGGSEFSDG--------LNQNAANNPTSCSNNTPSSSTGAQSRLC 120

Query: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180
           ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE
Sbjct: 121 ARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEE 180

Query: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240
           EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY
Sbjct: 181 EEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVY 240

Query: 241 RKMEQDLSFLNLPKD-NHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGGEAMS 300
           RKME+DLSFLN+PKD NH     AAAAATTTSCSSFGNFEGCVDY FL QM IGGG    
Sbjct: 241 RKMEEDLSFLNIPKDHNHHDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETM 300

Query: 301 SNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRS--HHQYQAYNTAAPPSN 360
           SN                       PKSRFW GTSNGFLVPRS  HHQY+AYNTAAPPSN
Sbjct: 301 SN-----------------------PKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPPSN 341

Query: 361 DGVGGSQAARVGSSTVTAEAR-KQSPRFIDFLGVGAT 389
            GV        GSS+VT E R KQSPRFIDFLGVGAT
Sbjct: 361 GGV-------EGSSSVTVEGRSKQSPRFIDFLGVGAT 341

[Close]

BLAST of Lsi04G004090 vs. NCBI nr
Match: KAG6574076.1 (Transcription factor MYB105, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 494.2 bits (1271), Expect = 1.0e-135
Identity = 279/403 (69.23%), Postives = 303/403 (75.19%), Query Frame = 0


Query: 1   MGMLVDED----------EESLNLDLNCAAAEIVSSSSSSSHESCENGRGFWNFPFSCES 60
           MGML D+           EESLNLDLN A   IVSSS  SS E  ENGRGFWNFPFSCES
Sbjct: 1   MGMLDDDHDDHDDFGVGVEESLNLDLNRA---IVSSSQESS-EVLENGRGFWNFPFSCES 60

Query: 61  MMTRSSEIDFGDNGNTTFNNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGA 120
            +TRSSE                   +DFSDGFVEN+NE LN+             ++GA
Sbjct: 61  -ITRSSE-------------------TDFSDGFVENMNEPLNK-------------ASGA 120

Query: 121 QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 180
           QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIA+KLEGRSGKSCRLRWFNQLDPRINRR
Sbjct: 121 QSRLCARGHWRPAEDTKLRELVALYGPQNWNLIADKLEGRSGKSCRLRWFNQLDPRINRR 180

Query: 181 AFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKL 240
            FSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSR YRRRKL
Sbjct: 181 VFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRSYRRRKL 240

Query: 241 SQSVYRKMEQDLSFLNLPKDNHDITTAAAAAATTTSCSSFGNFEGCVDYGFLSQMAIGGG 300
           SQSVYRKME+DLSFL LPK+  +           T+ S F    G VDYGFL+QMA  GG
Sbjct: 241 SQSVYRKMEEDLSFLVLPKEQDN--------RHPTARSPF----GAVDYGFLTQMATAGG 300

Query: 301 EAMSSNYNIPNNPYFSSCAHLSTLNVLPDPKSRFWNGTSNGFLVPRSHHQYQAYNTAAPP 360
           E+M+S++ + N P+FSSC+ LSTLNVLPDPKSRFW GT +GF+ PRSHHQYQ YNTAA  
Sbjct: 301 ESMNSHHRL-NQPFFSSCSPLSTLNVLPDPKSRFWEGTGHGFVEPRSHHQYQPYNTAALA 353

Query: 361 SNDGVGGSQAA-----RVGSSTVTAEARKQSPRFIDFLGVGAT 389
           SNDGVGGSQ A     R GSS+VTAE  KQ+P FIDFLGVGAT
Sbjct: 361 SNDGVGGSQVATSHVLRGGSSSVTAETTKQAPPFIDFLGVGAT 353

[Close]

BLAST of Lsi04G004090 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-58
Identity = 111/162 (68.52%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 69  NNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQSRLCARGHWRPAEDTKL 128
           +NNNN   S+   G  E             T    +  S+ ++  +  RGHWRPAED KL
Sbjct: 62  SNNNNPNFSNSESGKKET------------TDSGQSWSSSSSKPSVLGRGHWRPAEDVKL 121

Query: 129 RELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYG 188
           +ELV++YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YG
Sbjct: 122 KELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYG 181

Query: 189 NKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKL 231
           NKWAMIARLFPGRTDN+VKNHWHV+MARKYRE S  YRRRKL
Sbjct: 182 NKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]

BLAST of Lsi04G004090 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-58
Identity = 111/162 (68.52%), Postives = 126/162 (77.78%), Query Frame = 0


Query: 69  NNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQSRLCARGHWRPAEDTKL 128
           +NNNN   S+   G  E             T    +  S+ ++  +  RGHWRPAED KL
Sbjct: 62  SNNNNPNFSNSESGKKET------------TDSGQSWSSSSSKPSVLGRGHWRPAEDVKL 121

Query: 129 RELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYG 188
           +ELV++YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YG
Sbjct: 122 KELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYG 181

Query: 189 NKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKL 231
           NKWAMIARLFPGRTDN+VKNHWHV+MARKYRE S  YRRRKL
Sbjct: 182 NKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]

BLAST of Lsi04G004090 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 221.1 bits (562), Expect = 1.6e-57
Identity = 123/215 (57.21%), Postives = 149/215 (69.30%), Query Frame = 0


Query: 25  SSSSSSSHESCENGRGFWNFPFSCESMMTRSSEIDFGDNGNTTFNNNNNNGASDFSDGFV 84
           SS SSSSH         +N    C  +M+           ++ + + N + A      + 
Sbjct: 19  SSLSSSSHH-------HYNQQQHC--IMSEDQHHSMDQTTSSDYFSLNIDNAQHLRSYYT 78

Query: 85  ENINESLNQTAANPTSCSNNTP----STGAQSRL-CARGHWRPAEDTKLRELVALYGPQN 144
            +  E +N   ++ ++C+        S G  S+   +RGHWRPAEDTKL+ELVA+YGPQN
Sbjct: 79  SHREEDMNPNLSDYSNCNKKDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQN 138

Query: 145 WNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFP 204
           WNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIARLFP
Sbjct: 139 WNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFP 198

Query: 205 GRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSV 235
           GRTDN+VKNHWHVIMARK+REQS  YRRRK   S+
Sbjct: 199 GRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSL 224

[Close]

BLAST of Lsi04G004090 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 194.5 bits (493), Expect = 1.6e-49
Identity = 85/110 (77.27%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 114 LCARGHWRPAEDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFS 173
           +C+RGHWRPAED KLRELV  +GP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  F+
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 174 EEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSR 224
           EEEEERL+ +HRI+GN+W++IAR FPGRTDNAVKNHWHVIMAR+ RE+S+
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSK 111

[Close]

BLAST of Lsi04G004090 vs. TAIR 10
Match: AT3G29020.1 (myb domain protein 110 )

HSP 1 Score: 193.7 bits (491), Expect = 2.7e-49
Identity = 100/165 (60.61%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 66  TTFNNNNNNGASDFSDGFVENINESLNQTAANPTSCSNNTPSTGAQ--SRLCARGHWRPA 125
           TTFN    N A        E + E  N+      S    T     Q  SR+C+RGHWR +
Sbjct: 18  TTFNGFRENNAVS------ETVEEFCNKRRMQKKSDDLKTKKKKKQSVSRVCSRGHWRIS 77

Query: 126 EDTKLRELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQA 185
           EDT+L ELV++YGPQNWN IAE ++GR+GKSCRLRWFNQLDPRIN+RAFS+EEEERL+ A
Sbjct: 78  EDTQLMELVSVYGPQNWNHIAESMQGRTGKSCRLRWFNQLDPRINKRAFSDEEEERLLAA 137

Query: 186 HRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRR 229
           HR +GNKWAMIA+LF GRTDNA+KNHWHV+MARK R+QS  Y +R
Sbjct: 138 HRAFGNKWAMIAKLFNGRTDNALKNHWHVLMARKMRQQSSSYVQR 176

The following BLAST results are available for this feature:

BLAST of Lsi04G004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5NBM8	6.2e-59	84.00	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9LQX5	3.4e-57	68.52	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	2.2e-56	57.21	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q6R0C4	2.2e-48	77.27	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q6R053	4.9e-48	51.39	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]

BLAST of Lsi04G004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUV5	4.0e-162	80.45	Transcription factor MYB108 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BEX0	4.0e-162	80.45	transcription factor MYB108 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489131 P...	[more]
A0A0A0KQN1	1.5e-161	79.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605730 PE=4 SV=1	[more]
A0A1S4DW62	3.4e-145	74.81	myb-like protein Q isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489131 PE=4 SV=1	[more]
A0A6J1HTU7	6.5e-136	69.23	transcription factor CSA-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]

BLAST of Lsi04G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892944.1	1.6e-181	85.82	transcription factor MYB52-like [Benincasa hispida]	[more]
XP_008446370.1	8.4e-162	80.45	PREDICTED: transcription factor MYB108 isoform X1 [Cucumis melo] >KAA0034428.1 t...	[more]
XP_011655686.1	3.2e-161	79.80	transcription factor MYB117 [Cucumis sativus] >KGN51930.1 hypothetical protein C...	[more]
XP_016900224.1	7.1e-145	74.81	PREDICTED: myb-like protein Q isoform X2 [Cucumis melo]	[more]
KAG6574076.1	1.0e-135	69.23	Transcription factor MYB105, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi04G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26780.1	2.4e-58	68.52	myb domain protein 117	[more]
AT1G26780.2	2.4e-58	68.52	myb domain protein 117	[more]
AT1G69560.1	1.6e-57	57.21	myb domain protein 105	[more]
AT1G17950.1	1.6e-49	77.27	myb domain protein 52	[more]
AT3G29020.1	2.7e-49	60.61	myb domain protein 110	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 116..165 e-value: 4.6E-14 score: 62.7 coord: 168..216 e-value: 1.8E-14 score: 64.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 117..163 score: 10.487405
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 164..214 score: 9.779049
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 171..211 e-value: 4.16444E-12 score: 58.3558
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 120..161 e-value: 2.16892E-13 score: 62.2078
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 120..180 e-value: 4.6E-15 score: 55.6
None	No IPR available	GENE3D	1.10.10.60		coord: 117..168 e-value: 9.1E-23 score: 82.0
None	No IPR available	GENE3D	1.10.10.60		coord: 170..241 e-value: 2.2E-18 score: 68.1
None	No IPR available	PANTHER	PTHR45614:SF129	MYB TRANSCRIPTION FACTOR	coord: 337..388
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..336
None	No IPR available	PANTHER	PTHR45614:SF129	MYB TRANSCRIPTION FACTOR	coord: 1..336
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 337..388
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 164..218 score: 26.929466
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 117..163 score: 19.258677
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 117..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G004090.1	Lsi04G004090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding